View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2653_low_29 (Length: 210)
Name: NF2653_low_29
Description: NF2653
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2653_low_29 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 176; Significance: 5e-95; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 12 - 210
Target Start/End: Complemental strand, 34105860 - 34105664
Alignment:
| Q |
12 |
atgaatggaaaataccctaccctacaatataggaaatctgatgctatagataagaatgatttctttacattgacctacaaaatactagttaaaattaacc |
111 |
Q |
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| T |
34105860 |
atgaatggaaaataccctaccctacaatataggaaatctgatgctatagataagaatgattcctttacatagacctacaaaatactagttaaaattaacc |
34105761 |
T |
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| Q |
112 |
ttaagccaagttagcacaaaccatatgagaatatcatctgcattctatagatgttggacaatgatccccaagcaaatgaggattcttcaacttgggatc |
210 |
Q |
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| T |
34105760 |
ttaagccaagttagcacaaaccatatgagaatatcatctgcattctatagatgttggactat--tccccaagcaaatgaggattcttcaacttgggatc |
34105664 |
T |
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