View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2653_low_7 (Length: 519)
Name: NF2653_low_7
Description: NF2653
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2653_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 475; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 475; E-Value: 0
Query Start/End: Original strand, 13 - 503
Target Start/End: Original strand, 7904851 - 7905341
Alignment:
| Q |
13 |
gagatgaatcctaaatgaaaaagtaactcatacacttcactttctatgctgagaatggtgcaaagatttttgtgaaccatgaaaaagatccaaaatataa |
112 |
Q |
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| T |
7904851 |
gagatgaatcctaaatgagaaagtaactcatacacttcactttctatgctgagaatggtgcaaagatttttgtgaaccatgaaaaagatccaaaatataa |
7904950 |
T |
|
| Q |
113 |
cattgtagatcatcgaccgtatacttgatccacttctcatcaatgttagacgagtttctacctgtataacttcggtaagcaggaataactttctgagaaa |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |
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| T |
7904951 |
cattgtagatcatcgaccgtatacttgatccacttctcatcaatgttagacgagtttctacctgtataacttcggtaagcaggaatcaatttctgagaaa |
7905050 |
T |
|
| Q |
213 |
ccgatatttgtaggtcttcgcgaagttctttatcaggtacactccaccccgtctgtgttttgtatacttcaccaaaagcagtactaaaatctttgcattt |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7905051 |
ccgatatttgtaggtcttcgcgaagttctttatcaggtacactccaccccgtctgtgttttgtatacttcaccaaaagcagtactaaaatctttgcattt |
7905150 |
T |
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| Q |
313 |
tttctttagttttctcttcactccgcaattcgataaactttcctcactgaacacagaaagtactgcactccaagtcaccttctcatagcttctagcataa |
412 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7905151 |
tttctttagttttctcttcactctgcaattcgataaactttcctcactgaacacagaaagtactgcactccaagtcaccttctcatagcttctagcataa |
7905250 |
T |
|
| Q |
413 |
tgctgaaacatgccaacatgtcggcgaagccagaaatctccaaagaaattgcataggtttttagaacacttaaccttttgaaccatgtaat |
503 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7905251 |
tgctgaaacatgccaacatgtcggcgaagccagaaatctccaaagaaattgcataggtttttagaacacttaaccttttgaaccatgtaat |
7905341 |
T |
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