View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2654_low_12 (Length: 248)
Name: NF2654_low_12
Description: NF2654
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2654_low_12 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 12 - 248
Target Start/End: Complemental strand, 25683423 - 25683184
Alignment:
| Q |
12 |
ttcttggtttcttgggcaggtttagtactatttgtannnnnnngatctctttgatggtcta---acccttgtacttggctccgtttctttattaaaattc |
108 |
Q |
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| T |
25683423 |
ttcttggtttcttgggcaggttttgtactatttgtatttttttgaactatttgatggtctagtaacccttgtacttggctccgtttctttattaaaattc |
25683324 |
T |
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| Q |
109 |
ttatttgatgtttaaaacaaaattcctccaattttgagtagttaggaatgagaattaatggagagactccaatgccaccatgcacgatgataaagttgac |
208 |
Q |
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| T |
25683323 |
ttatttgatgtttaaaacaaaattcctccaattttgagtagttaggaatgagaattaatggagagactccaatgccaccatgcacgatgataaagttgac |
25683224 |
T |
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| Q |
209 |
atatatatgctggagttagaacctactattatcaagaacc |
248 |
Q |
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| T |
25683223 |
atatatatgctggagttagaacctactattatcaagaacc |
25683184 |
T |
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