View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2655_high_44 (Length: 239)
Name: NF2655_high_44
Description: NF2655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2655_high_44 |
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Alignment Details
Target: chr5 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 36158721 - 36158926
Alignment:
| Q |
18 |
aaatggacccaaaatcaggaaaaagtatagcagaggtgtgaatattcttttatagaattgggtgatttcattgagaatatattgatggagagaaatccaa |
117 |
Q |
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| T |
36158721 |
aaatggacccaaaatcaggaaaaagtatagcagaggtgtgaatattcttttatagaattgggtgatttcattgagaatatattgatggagagaaatccaa |
36158820 |
T |
|
| Q |
118 |
tggaaagaaaagaaagataagagatagaaaatgcagggaatatttacagcatgagagttagtaacagaacgaagaagttgcagcttctcatgcagtgctg |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36158821 |
tggaaagaaaagaaagataagagatagaaaatgcagggaatatttacagcatgagagttagtaacagaacgaagaagttgcagcttctcatgcagtgctg |
36158920 |
T |
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| Q |
218 |
ctctct |
223 |
Q |
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|||||| |
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| T |
36158921 |
ctctct |
36158926 |
T |
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