View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2655_low_10 (Length: 472)
Name: NF2655_low_10
Description: NF2655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2655_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 111 - 459
Target Start/End: Complemental strand, 33530086 - 33529746
Alignment:
| Q |
111 |
aatcaagcaccgatctgaaatcttaaatagttgaaaaagtgggtgtgtttgagaatctgagaataagggttggtgggtgttgaaggaaataagaaaaagg |
210 |
Q |
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| T |
33530086 |
aatcaagcaccgatctgaaatcttaaatagttgaaaaagcgggtgtgtttgagaatctgagaataagggttggtgggtgttgaaggaaataagaaaaagg |
33529987 |
T |
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| Q |
211 |
ttagggttttgtgaagtgtgtttaatttatgaatgaatgggacattttcatgtgtgtgnnnnnnnctgtgatcaaattttgaggatgtttgagaaggtat |
310 |
Q |
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| T |
33529986 |
atagggttttgtaaagtgtgtttaatttatgaatg----ggacaatttcatgtgttt----ttttctgtgatcaaattttgaggatgtttgagaaggtat |
33529895 |
T |
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| Q |
311 |
atttcttgtctttgaagtagtttacacgtggcactatgataatgaaccatgtcagcagatgtttatgttagtgttttgaaacttttgcaccaccattgaa |
410 |
Q |
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| T |
33529894 |
atttcttgtcattgaagttgtttacacgtggcactatgataatgaaccatgtcagcagatgtttatgttagtgttttgaatcttttgcaccaccattgaa |
33529795 |
T |
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| Q |
411 |
gatttgaagcttgctttttggtgacaccactacttatccctcatcttga |
459 |
Q |
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| T |
33529794 |
gatttgaagcttgctttttggtgacaccactacttatccctcatgttga |
33529746 |
T |
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