View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2655_low_2 (Length: 644)

Name: NF2655_low_2
Description: NF2655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2655_low_2
NF2655_low_2
[»] chr2 (55 HSPs)
chr2 (173-632)||(9295874-9296332)
chr2 (173-632)||(14291654-14292113)
chr2 (173-632)||(11098399-11098858)
chr2 (159-632)||(3491915-3492378)
chr2 (159-584)||(25409842-25410267)
chr2 (160-632)||(40738997-40739457)
chr2 (159-437)||(4484644-4484924)
chr2 (173-565)||(39811489-39811894)
chr2 (160-437)||(30832921-30833200)
chr2 (159-437)||(12647690-12647968)
chr2 (160-437)||(32289148-32289427)
chr2 (160-437)||(6266274-6266553)
chr2 (469-629)||(36757536-36757692)
chr2 (466-619)||(28258948-28259098)
chr2 (466-618)||(33528395-33528545)
chr2 (464-618)||(14698778-14698930)
chr2 (464-618)||(33118311-33118463)
chr2 (469-618)||(21630121-21630268)
chr2 (469-618)||(34389027-34389174)
chr2 (469-618)||(23078245-23078391)
chr2 (160-435)||(19344733-19345010)
chr2 (173-241)||(44310483-44310551)
chr2 (174-435)||(19349591-19349854)
chr2 (464-609)||(10445236-10445379)
chr2 (156-237)||(32247276-32247356)
chr2 (466-618)||(13569505-13569655)
chr2 (466-610)||(20522406-20522548)
chr2 (466-618)||(8389920-8390070)
chr2 (466-618)||(10707023-10707173)
chr2 (582-632)||(25398660-25398710)
chr2 (582-632)||(25403798-25403848)
chr2 (582-632)||(25407787-25407837)
chr2 (462-618)||(31056219-31056376)
chr2 (475-618)||(17865381-17865522)
chr2 (462-618)||(34682097-34682254)
chr2 (159-220)||(28258668-28258729)
chr2 (462-632)||(8040227-8040397)
chr2 (464-592)||(35397712-35397839)
chr2 (484-591)||(2837816-2837923)
chr2 (502-618)||(39483109-39483223)
chr2 (173-218)||(8389636-8389681)
chr2 (290-435)||(32247097-32247244)
chr2 (173-220)||(36757430-36757477)
chr2 (156-218)||(33528093-33528155)
chr2 (466-609)||(40015110-40015251)
chr2 (504-588)||(2869501-2869582)
chr2 (173-218)||(10706738-10706783)
chr2 (173-218)||(21630511-21630556)
chr2 (173-218)||(39483443-39483488)
chr2 (502-571)||(41586357-41586425)
chr2 (158-214)||(33118696-33118752)
chr2 (502-587)||(1344351-1344435)
chr2 (173-212)||(20522794-20522833)
chr2 (521-564)||(32246968-32247011)
chr2 (173-218)||(23077957-23078002)
[»] chr3 (101 HSPs)
chr3 (173-632)||(40372268-40372727)
chr3 (173-632)||(8477530-8477990)
chr3 (173-632)||(7167410-7167870)
chr3 (173-632)||(28503331-28503795)
chr3 (223-632)||(9090823-9091232)
chr3 (173-632)||(28501164-28501628)
chr3 (223-632)||(8738585-8738994)
chr3 (207-632)||(2671111-2671517)
chr3 (160-632)||(1306113-1306604)
chr3 (160-629)||(33386137-33386595)
chr3 (177-437)||(27352097-27352358)
chr3 (160-632)||(32143486-32143928)
chr3 (160-632)||(27453123-27453581)
chr3 (173-345)||(22172674-22172846)
chr3 (160-437)||(23198251-23198530)
chr3 (159-437)||(25637012-25637290)
chr3 (158-632)||(26928078-26928522)
chr3 (159-437)||(6716084-6716361)
chr3 (160-437)||(54634710-54634986)
chr3 (160-437)||(23200450-23200729)
chr3 (160-437)||(4598829-4599107)
chr3 (160-437)||(4601050-4601328)
chr3 (173-435)||(18656752-18657017)
chr3 (168-437)||(10058034-10058305)
chr3 (168-437)||(10060256-10060527)
chr3 (168-437)||(10062478-10062749)
chr3 (168-437)||(10064700-10064971)
chr3 (160-436)||(800685-800963)
chr3 (168-437)||(10055812-10056083)
chr3 (168-437)||(10066922-10067193)
chr3 (160-437)||(3617034-3617311)
chr3 (160-437)||(10210978-10211256)
chr3 (466-632)||(27986216-27986379)
chr3 (160-437)||(7782454-7782712)
chr3 (160-378)||(10208778-10208996)
chr3 (466-629)||(27974712-27974871)
chr3 (158-435)||(2672416-2672695)
chr3 (159-599)||(37725871-37726300)
chr3 (167-435)||(2676581-2676851)
chr3 (466-618)||(39032315-39032463)
chr3 (470-618)||(16264526-16264671)
chr3 (466-618)||(21711399-21711548)
chr3 (160-434)||(37408036-37408310)
chr3 (223-437)||(6718331-6718545)
chr3 (466-618)||(40592542-40592692)
chr3 (466-618)||(8370249-8370398)
chr3 (470-618)||(36029270-36029415)
chr3 (449-565)||(22172985-22173100)
chr3 (173-435)||(8512551-8512815)
chr3 (466-616)||(47923664-47923812)
chr3 (223-437)||(45282628-45282842)
chr3 (466-618)||(1736064-1736214)
chr3 (464-632)||(6794473-6794636)
chr3 (173-435)||(8517431-8517695)
chr3 (254-435)||(24968428-24968611)
chr3 (173-435)||(32475795-32476059)
chr3 (469-618)||(35925655-35925803)
chr3 (464-618)||(3323449-3323601)
chr3 (464-618)||(3328115-3328267)
chr3 (466-615)||(24694926-24695073)
chr3 (173-435)||(32480653-32480917)
chr3 (468-618)||(48438392-48438539)
chr3 (464-587)||(26299196-26299316)
chr3 (158-218)||(45282583-45282642)
chr3 (160-218)||(6718288-6718345)
chr3 (459-618)||(3715752-3715912)
chr3 (464-618)||(8126806-8126958)
chr3 (469-592)||(25929159-25929278)
chr3 (464-610)||(37466479-37466623)
chr3 (463-571)||(4386733-4386840)
chr3 (462-618)||(25795956-25796113)
chr3 (464-592)||(1417249-1417374)
chr3 (160-220)||(27974433-27974493)
chr3 (466-562)||(23410529-23410624)
chr3 (466-571)||(27026929-27027032)
chr3 (470-618)||(40844826-40844977)
chr3 (160-220)||(27985957-27986017)
chr3 (173-237)||(36029640-36029704)
chr3 (170-218)||(40734084-40734132)
chr3 (160-219)||(40845220-40845279)
chr3 (466-571)||(27038274-27038377)
chr3 (173-218)||(16264896-16264941)
chr3 (173-218)||(21711768-21711813)
chr3 (173-218)||(27027273-27027318)
chr3 (173-218)||(30709271-30709316)
chr3 (502-618)||(47649746-47649862)
chr3 (173-212)||(8738554-8738593)
chr3 (173-212)||(9090792-9090831)
chr3 (544-618)||(18552721-18552795)
chr3 (159-238)||(27038588-27038667)
chr3 (160-218)||(39032017-39032075)
chr3 (466-565)||(23392106-23392204)
chr3 (170-218)||(40735015-40735063)
chr3 (521-564)||(18656614-18656657)
chr3 (173-211)||(1730921-1730959)
chr3 (462-592)||(21353765-21353898)
chr3 (364-435)||(22172884-22172957)
chr3 (173-218)||(35926057-35926101)
chr3 (173-218)||(40592257-40592302)
chr3 (177-218)||(48438782-48438823)
chr3 (405-437)||(10209004-10209036)
[»] chr4 (65 HSPs)
chr4 (173-632)||(24742106-24742565)
chr4 (223-630)||(29760810-29761196)
chr4 (160-632)||(28467977-28468470)
chr4 (173-565)||(51520637-51521038)
chr4 (173-565)||(9228698-9229099)
chr4 (173-565)||(9223911-9224312)
chr4 (173-435)||(56141523-56141788)
chr4 (160-437)||(13992600-13992879)
chr4 (160-437)||(31495623-31495902)
chr4 (168-437)||(7122274-7122544)
chr4 (6-159)||(44882044-44882193)
chr4 (160-437)||(8392982-8393258)
chr4 (173-419)||(5732987-5733235)
chr4 (156-565)||(3814202-3814609)
chr4 (201-435)||(18712295-18712531)
chr4 (160-437)||(8395191-8395467)
chr4 (159-628)||(31985126-31985563)
chr4 (159-437)||(5135648-5135927)
chr4 (160-437)||(5137875-5138153)
chr4 (168-345)||(7124496-7124673)
chr4 (173-435)||(18856033-18856297)
chr4 (173-435)||(45347329-45347593)
chr4 (466-632)||(16623064-16623225)
chr4 (466-629)||(5396442-5396601)
chr4 (466-632)||(16628643-16628804)
chr4 (466-618)||(5268971-5269121)
chr4 (466-618)||(6743186-6743335)
chr4 (466-618)||(3777725-3777875)
chr4 (469-618)||(8689270-8689416)
chr4 (475-565)||(18712581-18712671)
chr4 (470-634)||(5143422-5143582)
chr4 (466-610)||(36315001-36315142)
chr4 (466-610)||(36329210-36329351)
chr4 (254-435)||(45356891-45357074)
chr4 (466-592)||(10047584-10047707)
chr4 (464-592)||(25861802-25861927)
chr4 (159-632)||(5147842-5148303)
chr4 (4-144)||(44864160-44864299)
chr4 (173-236)||(18860446-18860509)
chr4 (466-618)||(5112413-5112564)
chr4 (466-618)||(38152208-38152358)
chr4 (38-140)||(44849938-44850040)
chr4 (466-592)||(54867385-54867505)
chr4 (464-591)||(42599344-42599467)
chr4 (462-618)||(24333987-24334144)
chr4 (157-218)||(29761182-29761242)
chr4 (36-126)||(44838131-44838221)
chr4 (160-220)||(5143807-5143867)
chr4 (173-221)||(8689049-8689097)
chr4 (461-610)||(3793843-3793993)
chr4 (173-218)||(16628358-16628403)
chr4 (173-218)||(38151923-38151968)
chr4 (462-565)||(51336933-51337035)
chr4 (173-217)||(3778116-3778160)
chr4 (521-564)||(45347678-45347721)
chr4 (173-219)||(5268704-5268750)
chr4 (462-565)||(6542378-6542480)
chr4 (173-218)||(6742901-6742946)
chr4 (173-218)||(10047932-10047977)
chr4 (177-218)||(16622783-16622824)
chr4 (521-564)||(5732844-5732887)
chr4 (466-618)||(39774075-39774226)
chr4 (173-218)||(36314716-36314761)
chr4 (173-218)||(36328925-36328970)
chr4 (173-218)||(54867745-54867790)
[»] chr8 (51 HSPs)
chr8 (173-632)||(4759546-4760006)
chr8 (173-632)||(30655812-30656270)
chr8 (173-632)||(18852639-18853098)
chr8 (173-632)||(36979543-36980002)
chr8 (173-632)||(18870033-18870492)
chr8 (160-632)||(1261414-1261886)
chr8 (173-620)||(6311476-6311923)
chr8 (223-632)||(10688661-10689073)
chr8 (157-632)||(26288055-26288520)
chr8 (157-632)||(26301312-26301777)
chr8 (157-632)||(26313306-26313771)
chr8 (173-565)||(7289439-7289831)
chr8 (173-435)||(10683751-10684015)
chr8 (173-378)||(33037299-33037504)
chr8 (448-632)||(33037554-33037738)
chr8 (173-565)||(25327676-25328058)
chr8 (160-437)||(3439088-3439363)
chr8 (160-437)||(2627318-2627597)
chr8 (160-437)||(42575631-42575909)
chr8 (173-435)||(39784337-39784601)
chr8 (505-632)||(31071035-31071161)
chr8 (160-378)||(15290143-15290361)
chr8 (160-378)||(15470512-15470730)
chr8 (466-618)||(7412517-7412666)
chr8 (466-629)||(4456195-4456354)
chr8 (160-276)||(31042908-31043024)
chr8 (223-436)||(25689604-25689817)
chr8 (160-435)||(35745702-35745979)
chr8 (469-618)||(19175528-19175674)
chr8 (466-618)||(4696379-4696529)
chr8 (160-305)||(7412807-7412952)
chr8 (466-610)||(5702251-5702393)
chr8 (466-610)||(23799347-23799489)
chr8 (464-618)||(19752163-19752314)
chr8 (486-565)||(25328105-25328184)
chr8 (157-218)||(25689558-25689618)
chr8 (364-437)||(31043112-31043185)
chr8 (502-618)||(26403034-26403150)
chr8 (290-396)||(31043017-31043125)
chr8 (506-592)||(9054231-9054314)
chr8 (173-218)||(10688630-10688675)
chr8 (466-618)||(3051296-3051447)
chr8 (173-218)||(5701964-5702009)
chr8 (466-591)||(28307766-28307889)
chr8 (168-218)||(4456575-4456625)
chr8 (502-618)||(6127399-6127515)
chr8 (521-564)||(39784685-39784728)
chr8 (203-237)||(11383406-11383440)
chr8 (405-437)||(15290369-15290401)
chr8 (405-437)||(15470738-15470770)
chr8 (174-218)||(23799105-23799149)
[»] chr7 (73 HSPs)
chr7 (173-632)||(2058132-2058592)
chr7 (204-632)||(1532947-1533374)
chr7 (160-632)||(21646171-21646643)
chr7 (160-632)||(18413804-18414275)
chr7 (160-632)||(18408928-18409399)
chr7 (173-563)||(4873310-4873709)
chr7 (160-436)||(24789426-24789703)
chr7 (173-565)||(24023831-24024232)
chr7 (173-378)||(20357040-20357245)
chr7 (173-378)||(21640206-21640411)
chr7 (173-565)||(31109082-31109489)
chr7 (173-419)||(12406598-12406845)
chr7 (448-632)||(21639973-21640156)
chr7 (448-632)||(20357294-20357478)
chr7 (160-397)||(39730933-39731172)
chr7 (160-437)||(6592644-6592921)
chr7 (173-565)||(12397091-12397480)
chr7 (159-437)||(6594860-6595138)
chr7 (160-358)||(43504523-43504721)
chr7 (160-629)||(2479503-2479960)
chr7 (160-437)||(18392503-18392780)
chr7 (159-378)||(32060671-32060889)
chr7 (160-378)||(20343500-20343717)
chr7 (157-437)||(25767267-25767543)
chr7 (159-378)||(48408397-48408618)
chr7 (156-437)||(1562310-1562591)
chr7 (167-345)||(21811745-21811923)
chr7 (173-435)||(16880384-16880648)
chr7 (173-435)||(16885239-16885503)
chr7 (460-618)||(46516070-46516226)
chr7 (466-629)||(47263833-47263992)
chr7 (466-618)||(20284265-20284415)
chr7 (466-618)||(23402784-23402934)
chr7 (173-435)||(24265689-24265953)
chr7 (290-437)||(18389067-18389215)
chr7 (160-432)||(47263994-47264267)
chr7 (464-618)||(2580566-2580717)
chr7 (469-632)||(21989072-21989231)
chr7 (469-618)||(4796443-4796589)
chr7 (491-563)||(12406513-12406585)
chr7 (158-278)||(44847617-44847737)
chr7 (160-234)||(1532884-1532958)
chr7 (464-592)||(2647466-2647591)
chr7 (466-588)||(44847896-44848015)
chr7 (159-305)||(21989387-21989532)
chr7 (466-618)||(33332221-33332371)
chr7 (464-618)||(9189775-9189928)
chr7 (464-618)||(9184943-9185095)
chr7 (269-435)||(24260929-24261097)
chr7 (466-610)||(3047438-3047581)
chr7 (160-305)||(21983722-21983867)
chr7 (544-632)||(21983450-21983536)
chr7 (459-618)||(29159981-29160141)
chr7 (462-610)||(5817036-5817183)
chr7 (466-544)||(79636-79714)
chr7 (160-217)||(18390506-18390562)
chr7 (466-565)||(49091918-49092015)
chr7 (544-618)||(49091839-49091913)
chr7 (173-235)||(24260833-24260895)
chr7 (173-218)||(79955-80000)
chr7 (548-618)||(56125-56195)
chr7 (544-618)||(35960993-35961067)
chr7 (203-237)||(4509335-4509369)
chr7 (203-237)||(4511177-4511211)
chr7 (203-237)||(6431467-6431501)
chr7 (203-237)||(14070348-14070382)
chr7 (203-237)||(14380376-14380410)
chr7 (581-619)||(44848567-44848605)
chr7 (407-437)||(48408628-48408658)
chr7 (511-618)||(9235398-9235503)
chr7 (174-219)||(49092237-49092282)
chr7 (385-437)||(20343705-20343756)
chr7 (405-437)||(32060631-32060663)
[»] chr6 (68 HSPs)
chr6 (158-632)||(5674227-5674700)
chr6 (160-632)||(22709173-22709645)
chr6 (173-565)||(22010201-22010602)
chr6 (173-565)||(11857154-11857555)
chr6 (173-565)||(14741938-14742342)
chr6 (173-328)||(30125030-30125185)
chr6 (223-565)||(14737128-14737482)
chr6 (158-437)||(411683-411965)
chr6 (160-437)||(3073064-3073343)
chr6 (159-437)||(16578825-16579102)
chr6 (159-437)||(16616278-16616555)
chr6 (168-437)||(34166673-34166944)
chr6 (223-378)||(5266455-5266610)
chr6 (160-437)||(6026834-6027111)
chr6 (160-437)||(16554454-16554730)
chr6 (160-437)||(16631010-16631286)
chr6 (158-437)||(6136271-6136549)
chr6 (160-437)||(33342410-33342688)
chr6 (160-378)||(27647467-27647685)
chr6 (156-437)||(34164440-34164722)
chr6 (160-378)||(2171884-2172104)
chr6 (160-397)||(25420797-25421034)
chr6 (168-378)||(13150856-13151067)
chr6 (173-400)||(6438843-6439071)
chr6 (160-435)||(16839054-16839331)
chr6 (160-435)||(33329932-33330209)
chr6 (159-629)||(5756950-5757408)
chr6 (158-276)||(6097870-6097988)
chr6 (464-618)||(31979689-31979840)
chr6 (159-435)||(6005730-6006008)
chr6 (160-435)||(33335429-33335706)
chr6 (290-437)||(25421020-25421168)
chr6 (464-618)||(5572012-5572163)
chr6 (160-305)||(23896812-23896957)
chr6 (160-237)||(26253589-26253666)
chr6 (254-435)||(28155164-28155347)
chr6 (466-618)||(31086245-31086394)
chr6 (464-592)||(31936778-31936903)
chr6 (223-437)||(16652759-16652973)
chr6 (466-618)||(24435743-24435892)
chr6 (156-238)||(34151824-34151905)
chr6 (470-592)||(5017271-5017390)
chr6 (173-345)||(5343880-5344052)
chr6 (160-218)||(16652716-16652773)
chr6 (544-618)||(18233023-18233096)
chr6 (462-618)||(21801108-21801265)
chr6 (468-592)||(22963902-22964023)
chr6 (468-592)||(23824370-23824491)
chr6 (511-629)||(21356204-21356318)
chr6 (290-433)||(26253698-26253843)
chr6 (173-218)||(5266596-5266641)
chr6 (173-218)||(14737097-14737142)
chr6 (466-521)||(10076962-10077017)
chr6 (544-618)||(4630130-4630203)
chr6 (466-540)||(18234335-18234409)
chr6 (384-437)||(6097747-6097800)
chr6 (290-378)||(6097787-6097877)
chr6 (544-591)||(14521877-14521924)
chr6 (173-216)||(28155102-28155145)
chr6 (503-565)||(28184684-28184749)
chr6 (469-539)||(21272763-21272833)
chr6 (384-437)||(2171844-2171897)
chr6 (173-218)||(5016981-5017026)
chr6 (173-218)||(31085958-31086003)
chr6 (167-218)||(5571755-5571806)
chr6 (521-564)||(28155432-28155475)
chr6 (466-516)||(23896628-23896678)
chr6 (173-213)||(21272474-21272514)
[»] chr5 (70 HSPs)
chr5 (159-628)||(24136017-24136485)
chr5 (223-632)||(31180379-31180787)
chr5 (290-632)||(35387827-35388169)
chr5 (173-565)||(27449994-27450397)
chr5 (173-565)||(27445150-27445554)
chr5 (173-565)||(43598904-43599306)
chr5 (173-565)||(43604396-43604798)
chr5 (173-565)||(43609888-43610290)
chr5 (246-632)||(38219563-38219944)
chr5 (223-565)||(43592459-43592811)
chr5 (173-435)||(1456650-1456914)
chr5 (173-565)||(15044865-15045267)
chr5 (160-437)||(18441954-18442233)
chr5 (160-437)||(26177466-26177745)
chr5 (160-437)||(9789530-9789809)
chr5 (173-345)||(30631764-30631936)
chr5 (168-437)||(25077713-25077983)
chr5 (168-437)||(25135682-25135952)
chr5 (173-328)||(29402562-29402717)
chr5 (160-437)||(10592844-10593120)
chr5 (160-619)||(9352807-9353253)
chr5 (160-357)||(29719965-29720163)
chr5 (158-437)||(40379676-40379955)
chr5 (160-437)||(26170357-26170636)
chr5 (160-437)||(16546216-16546493)
chr5 (160-437)||(40381889-40382166)
chr5 (159-345)||(22536668-22536853)
chr5 (160-437)||(16543994-16544271)
chr5 (475-632)||(30631572-30631730)
chr5 (365-629)||(15464700-15464952)
chr5 (160-362)||(16407641-16407843)
chr5 (160-339)||(29722152-29722332)
chr5 (160-362)||(16409077-16409279)
chr5 (160-436)||(29751467-29751724)
chr5 (449-565)||(1456952-1457067)
chr5 (466-629)||(36932119-36932279)
chr5 (160-283)||(29752267-29752390)
chr5 (466-630)||(14520396-14520556)
chr5 (160-435)||(33768495-33768772)
chr5 (160-435)||(33791627-33791904)
chr5 (160-435)||(2785686-2785963)
chr5 (464-618)||(24553296-24553448)
chr5 (464-618)||(28832433-28832585)
chr5 (469-618)||(11916746-11916892)
chr5 (173-345)||(28807088-28807260)
chr5 (464-618)||(31300364-31300516)
chr5 (160-276)||(15465009-15465125)
chr5 (160-276)||(36931843-36931959)
chr5 (466-618)||(11181603-11181753)
chr5 (466-618)||(17003730-17003880)
chr5 (167-344)||(37560953-37561130)
chr5 (167-344)||(37556131-37556308)
chr5 (159-435)||(31396488-31396766)
chr5 (464-592)||(42127139-42127264)
chr5 (160-435)||(31401346-31401623)
chr5 (469-610)||(12083951-12084089)
chr5 (462-618)||(10281928-10282085)
chr5 (502-618)||(19588921-19589035)
chr5 (160-210)||(35388196-35388246)
chr5 (173-218)||(31180773-31180818)
chr5 (173-218)||(43592797-43592842)
chr5 (159-218)||(14520796-14520855)
chr5 (480-592)||(7160689-7160798)
chr5 (341-437)||(36932002-36932100)
chr5 (521-564)||(28807436-28807479)
chr5 (601-632)||(38192338-38192369)
chr5 (168-218)||(11916452-11916502)
chr5 (461-608)||(3880486-3880634)
chr5 (177-218)||(12083667-12083708)
chr5 (381-437)||(29722330-29722386)
[»] chr1 (52 HSPs)
chr1 (160-632)||(19365768-19366240)
chr1 (240-632)||(24786904-24787295)
chr1 (160-632)||(24202251-24202701)
chr1 (160-632)||(19360912-19361364)
chr1 (384-632)||(19358530-19358775)
chr1 (160-436)||(20622543-20622821)
chr1 (223-419)||(24793709-24793905)
chr1 (160-437)||(9986785-9987064)
chr1 (159-437)||(44203217-44203495)
chr1 (160-629)||(13604095-13604552)
chr1 (160-437)||(40281958-40282238)
chr1 (168-435)||(41390910-41391178)
chr1 (160-437)||(9036003-9036279)
chr1 (160-437)||(21053540-21053819)
chr1 (173-435)||(1054526-1054790)
chr1 (173-400)||(39445842-39446070)
chr1 (158-378)||(51764988-51765210)
chr1 (173-400)||(44023389-44023617)
chr1 (173-435)||(25439411-25439675)
chr1 (223-435)||(41398565-41398778)
chr1 (173-435)||(25444604-25444868)
chr1 (469-618)||(21536344-21536490)
chr1 (469-618)||(3281884-3282030)
chr1 (466-619)||(37069943-37070093)
chr1 (543-632)||(19379916-19380004)
chr1 (464-610)||(47098594-47098738)
chr1 (447-565)||(41398415-41398534)
chr1 (466-618)||(13598576-13598726)
chr1 (466-618)||(26644669-26644818)
chr1 (464-592)||(47102608-47102733)
chr1 (464-618)||(27104171-27104322)
chr1 (468-618)||(29651989-29652137)
chr1 (447-565)||(41390760-41390879)
chr1 (464-618)||(32889616-32889766)
chr1 (464-618)||(9476438-9476590)
chr1 (462-618)||(40816580-40816737)
chr1 (254-436)||(43988042-43988226)
chr1 (467-618)||(19073104-19073256)
chr1 (467-618)||(19120994-19121146)
chr1 (468-629)||(22819596-22819756)
chr1 (177-305)||(26644390-26644518)
chr1 (167-237)||(21536119-21536189)
chr1 (462-587)||(47703699-47703824)
chr1 (173-218)||(24793678-24793723)
chr1 (528-618)||(16124347-16124435)
chr1 (156-218)||(3282273-3282335)
chr1 (168-218)||(41398764-41398814)
chr1 (173-218)||(13598967-13599012)
chr1 (174-218)||(37070334-37070378)
chr1 (504-591)||(9022715-9022799)
chr1 (177-218)||(16124197-16124238)
chr1 (206-238)||(1192296-1192328)
[»] scaffold0188 (2 HSPs)
scaffold0188 (159-632)||(17430-17884)
scaffold0188 (448-632)||(23794-23977)
[»] scaffold0135 (1 HSPs)
scaffold0135 (173-565)||(34566-34967)
[»] scaffold0491 (3 HSPs)
scaffold0491 (156-437)||(11475-11757)
scaffold0491 (160-378)||(9089-9308)
scaffold0491 (384-437)||(9049-9102)
[»] scaffold0355 (1 HSPs)
scaffold0355 (173-565)||(3349-3754)
[»] scaffold0565 (1 HSPs)
scaffold0565 (160-437)||(2908-3185)
[»] scaffold0006 (5 HSPs)
scaffold0006 (160-629)||(132752-133209)
scaffold0006 (466-618)||(5861-6011)
scaffold0006 (466-610)||(2678-2819)
scaffold0006 (173-218)||(6252-6297)
scaffold0006 (173-218)||(3060-3105)
[»] scaffold0674 (1 HSPs)
scaffold0674 (160-437)||(4033-4310)
[»] scaffold0286 (1 HSPs)
scaffold0286 (160-378)||(21939-22159)
[»] scaffold1519 (1 HSPs)
scaffold1519 (201-437)||(523-761)
[»] scaffold0137 (1 HSPs)
scaffold0137 (160-437)||(5859-6137)
[»] scaffold0087 (3 HSPs)
scaffold0087 (167-629)||(43441-43891)
scaffold0087 (466-629)||(36603-36762)
scaffold0087 (158-220)||(36322-36384)
[»] scaffold0140 (3 HSPs)
scaffold0140 (466-629)||(8188-8348)
scaffold0140 (160-276)||(7911-8027)
scaffold0140 (341-437)||(8070-8168)
[»] scaffold0464 (1 HSPs)
scaffold0464 (173-345)||(761-933)
[»] scaffold0665 (2 HSPs)
scaffold0665 (223-341)||(8112-8230)
scaffold0665 (173-218)||(8216-8261)
[»] scaffold0098 (3 HSPs)
scaffold0098 (466-619)||(45374-45525)
scaffold0098 (159-220)||(45744-45805)
scaffold0098 (243-436)||(45546-45740)
[»] scaffold0259 (1 HSPs)
scaffold0259 (173-435)||(1751-2015)
[»] scaffold0197 (2 HSPs)
scaffold0197 (173-435)||(13796-14060)
scaffold0197 (160-435)||(18663-18940)
[»] scaffold0028 (1 HSPs)
scaffold0028 (173-435)||(148456-148720)
[»] scaffold0009 (1 HSPs)
scaffold0009 (173-435)||(176462-176726)
[»] scaffold0036 (1 HSPs)
scaffold0036 (469-610)||(85868-86006)
[»] scaffold0510 (1 HSPs)
scaffold0510 (160-305)||(1083-1228)
[»] scaffold1455 (1 HSPs)
scaffold1455 (173-236)||(1721-1784)
[»] scaffold0148 (1 HSPs)
scaffold0148 (462-592)||(10934-11064)
[»] scaffold0078 (1 HSPs)
scaffold0078 (466-571)||(23755-23859)
[»] scaffold0176 (1 HSPs)
scaffold0176 (466-571)||(17474-17577)
[»] scaffold0466 (1 HSPs)
scaffold0466 (203-237)||(6750-6784)


Alignment Details
Target: chr2 (Bit Score: 336; Significance: 0; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 173 - 632
Target Start/End: Original strand, 9295874 - 9296332
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  9295874 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcaggatgccaaat 9295973  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |  ||| |||||||||    
T  9295974 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgataaggactggtcataccttgggtcggacgcaaatcgtga 9296073  T
Q  373 cacgatctggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgcagnnnnnnnagagagagcttggaagagcttagagag 471  Q
    ||||||||| |||||||||||||||| | || ||||||||||||||||| ||||||||||||||         || ||||||||||||||||||||||||    
T  9296074 cacgatctgaaaatcgtgacacgattgcttcagaggaagactagtatttaaagtgttcttgtgc-ttttttggag-gagagcttggaagagcttagagag 9296171  T
Q  472 agaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgag 571  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  9296172 aaaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagaaagtgtctattgggttgggaaaaacattgtaatcaccttgggtagtgag 9296271  T
Q  572 gagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9296272 gagttcaccattggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 9296332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 173 - 632
Target Start/End: Complemental strand, 14292113 - 14291654
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||    
T  14292113 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatctcgaggtgccgtgagctagtttgcaggacgccaaat 14292014  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |  ||| ||||||||||| |||||||||   |||| |||||||||    
T  14292013 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtaccactgataaggactggtcataccttgggttgtacgcaaatcgtga 14291914  T
Q  373 cacgatctggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgcagnnnnnnnagagagagcttggaagagcttagagag 471  Q
    |||||||||||||||||| ||||||||| || ||||||||||||||| ||  ||||||||||||||       |||||||||||||||||||||||||||    
T  14291913 cacgatctggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcag--attttagagagagcttggaagagcttagagag 14291816  T
Q  472 agaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgag 571  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14291815 agaaacttggattacaaaggagggaaccaaagggttgagcgtctttgtagatagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 14291716  T
Q  572 gagttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    |||||||  | |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14291715 gagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 14291654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 173 - 632
Target Start/End: Original strand, 11098399 - 11098858
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  11098399 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatagtgacacgatttcaaggtgccgtgagctagtttgcaggacgccaaat 11098498  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| |||||||||  ||| |||||||||||  ||||||||   |||| |||||||||    
T  11098499 cgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatcactgataaggactggtcaaaccttgggttgtacgcaaatcgtga 11098598  T
Q  373 cacgatctggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgcagnnnnnnnagagagagcttggaagagcttagagag 471  Q
    |||||||||||||||||| ||||||||| || |||||||||||| || ||  ||||||||||||||       ||| |||||||||||||||||||||||    
T  11098599 cacgatctggaaatcgtggcacgatttcttcagaggaagactagcatatattgtgttcttgtgcag-atttgtaga-agagcttggaagagcttagagag 11098696  T
Q  472 agaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgag 571  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11098697 agaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 11098796  T
Q  572 gagttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    |||| ||  | |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11098797 gagtacattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 11098858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 159 - 632
Target Start/End: Complemental strand, 3492378 - 3491915
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagttt 258  Q
    ||||||||||||| |||||||||||||||||| |||||||| ||||| ||||||||| |||||||||||||||||||||   | || |||||||| ||||    
T  3492378 ttgttgagatttggcttcaaatttgtggtctgaaagaacagagaaattgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggttt 3492279  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    |||||  ||||||||||| | ||||||||||||||||||||||||||| ||||||||||| |||||| |||  || |||||| |||| ||||||| |||     
T  3492278 gcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattctgaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacg 3492179  T
Q  359 tacgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttg 456  Q
    ||||||  |||||||||||||  ||||||||||||||| ||||  || | |||||||||||||||||||||||||||||             |||  |||    
T  3492178 tacgtaccaatcgtgacacgacttggaaatcgtgacacaattttatcagtggaagactagtatttaagtgttcttgtgc-------------agattttg 3492092  T
Q  457 ga--agagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaa 554  Q
    ||  | |||||||||||||||||||||||||||||||||||||    |||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  3492091 gagtaaagcttagagagagaaacttggattacaaaggagggaaatctagggttgagtgtctttgtagtgaggatctcttgggttggaaaaaacattgtaa 3491992  T
Q  555 tcaccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
     ||||||||||||||| || | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3491991 acaccttgggtagtga-gattccaccattggaaggatcttaagcttcctcttgtgtcttctcttttagggttcatatt 3491915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 159 - 584
Target Start/End: Complemental strand, 25410267 - 25409842
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagttt 258  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||   | || |||||| | ||||    
T  25410267 ttgttgagttttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagatggttt 25410168  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    |||||  ||||||||||| | ||||||||||||||||||||||||||   |||||||||| |||||||||||||| ||||| ||||| ||||||| |||     
T  25410167 gcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggaatggtcgtaccttgtgacg 25410068  T
Q  359 tacgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttg 456  Q
    ||||||  |||||||||||||  ||||||||||||||| ||||  || |||||||  |  |||||||||||||||||||||       ||  ||||||||    
T  25410067 tacgtaccaatcgtgacacgacttggaaatcgtgacacaattttatcagaggaaggatgatatttaagtgttcttgtgcagattttgaag-tagagcttg 25409969  T
Q  457 gaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatc 556  Q
    ||||||||||||||||||||||||||||||| ||||||||||   ||||||||||||||||||||||||  ||||||||||||| ||||||||||||| |    
T  25409968 gaagagcttagagagagaaacttggattacagaggagggaacactagggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaaac 25409869  T
Q  557 accttgggtagtgaggagttcaccattg 584  Q
    |||||||||||||| || ||||||||||    
T  25409868 accttgggtagtga-gatttcaccattg 25409842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 160 - 632
Target Start/End: Complemental strand, 40739457 - 40738997
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| |||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||     || |||||||| |||||    
T  40739457 tgttgagatttggcttcaaatttgtggtctggaagaacagacaaatcgtgacacgaatttggcatcgtgacacgattttgttatgccgtgagctggtttg 40739358  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||||| | |||||||| | ||| ||||||| |||   |||||||||| |||||| | |  || |||||| |||| ||||||| ||| |    
T  40739357 cagggtgccaaatcgtgacacgatcttgtggaattgtgacacaattttcaaacttgctcgttaagttttcaggataaggacaggtcgtaccttgtgacgt 40739258  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttgg 457  Q
    |||||  |||||||||||||| ||||||||||||||||||||  || |  ||||||| ||||||||||||||||||||||                ||||    
T  40739257 acgtatcaatcgtgacacgatttggaaatcgtgacacgattttatcagttgaagacttgtatttaagtgttcttgtgcagtttt------------ttgg 40739170  T
Q  458 a--agagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaat 555  Q
    |  |||| | | |||||||||||||||||||||||||||||||   |||||||||||||||||||| |||  |||||||||||||   |||||||||||     
T  40739169 agtagagttga-agagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaa 40739073  T
Q  556 caccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    ||||||||||| ||| || |||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||    
T  40739072 caccttgggtaatga-gatttcaccattggaaggatcaaaagcttactattgtgtcttctcttttagggttcatatt 40738997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 159 - 437
Target Start/End: Complemental strand, 4484924 - 4484644
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagttt 258  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| | || |||||||||||||    
T  4484924 ttgttgagattttacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctagttt 4484825  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    |||||  ||||||||||| | |||||||  | |||||||||||||||   |||||||||| |||||| ||  ||| ||||||||||| |||||||||||     
T  4484824 gcagggtgccaaatcgtgacacgatcttaaggaatcgtgacacgatttgcaaacttgctcgttaagtttctatgataaggactggtcgtaccttgggacg 4484725  T
Q  359 tacgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||||||  |||||||||||||||||||||||||||||||||||  || | ||||| |||||||||||||||||||||||||    
T  4484724 tacgtaccaatcgtgacacgatctggaaatcgtgacacgattttatcagtggaaggctagtatttaagtgttcttgtgcag 4484644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 173 - 565
Target Start/End: Original strand, 39811489 - 39811894
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    ||| ||| |||||||||||||||||||    
T  39811489 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtgaccgtaagcaagtttgcaggacgccaaat 39811588  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| ||||||| ||| | ||||||| |    | | |||||||    
T  39811589 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggacttgtc-tgccttggggccgttgcagatcgtga 39811687  T
Q  373 cacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgc--------ag--nnnnnnnagagagagcttggaa 459  Q
    ||||||||  |||||||||| ||||||||| || ||||||||||||||| ||  ||||||||||||        ||         |||||||||||| |     
T  39811688 cacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaagtaggacttaagagagagcttgtat 39811787  T
Q  460 gagcttag-agagagaaacttggattacaaaggagggaaccaaa-gggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatca 557  Q
    |||||| | | |||| |||||||||  ||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||  ||||||||||||||||    
T  39811788 gagctttgtacagag-aacttggatagcaaaggagggaaccaaatgggttgagtgtctttgttgagagtgtctcttaggttgagaaaaacattgtaatca 39811886  T
Q  558 ccttgggt 565  Q
    ||||||||    
T  39811887 ccttgggt 39811894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 160 - 437
Target Start/End: Original strand, 30832921 - 30833200
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||| || |||| |||||||||||||||||  | || |||||||| |||||    
T  30832921 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttgacatcgtgacacgatttcgtgatgccgtgagctggtttg 30833020  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||||| | ||||||||||||||||||||||||||   |||||||||| |||||| |||  || |||||| |||| ||||||| ||| |    
T  30833021 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacgt 30833120  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    |||||  |||||||||||||  ||||||||||||||||||||  || | |||||||||||||||||||||||||||||||    
T  30833121 acgtaccaatcgtgacacgacttggaaatcgtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcag 30833200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 159 - 437
Target Start/End: Complemental strand, 12647968 - 12647690
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-t 257  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  | || ||||||||||  |    
T  12647968 ttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcg-gatgccgtgagctagggt 12647871  T
Q  258 tgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggac 357  Q
    ||||||    ||||||||||| ||||  ||||||||||||||||||| || |||||||||| |||||||||||||| ||||||||||| | |||||||||    
T  12647870 tgcaggggtgcaaatcgtggcacgattgtgggaaatcgtgacacgatccataaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 12647771  T
Q  358 atacgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
      ||| |||||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  12647770 ggacgcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 12647690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 160 - 437
Target Start/End: Original strand, 32289148 - 32289427
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||   | || |||||||| |||||    
T  32289148 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 32289247  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  |||||||| || | |||||||| | |||||||||||||||   |||||||||| |||||| ||| ||| ||||||||||| ||||||||||| |    
T  32289248 cagggtgccaaatcttgacacgatcttgaggaatcgtgacacgatttgaaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacgt 32289347  T
Q  360 acg--taaatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    |||    ||||||||||||| |||||||||||||||||||||  || | ||| | |||||||||||||||||||||||||    
T  32289348 acgctccaatcgtgacacgacctggaaatcgtgacacgattttatcagtggagggctagtatttaagtgttcttgtgcag 32289427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 160 - 437
Target Start/End: Original strand, 6266274 - 6266553
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||| |||||  | || |||||||| |||||    
T  6266274 tgttgagatttgtcttcaaatttgtggtctggaagaacatggaaatcgtgacacgaatttgacatcgtgacacaatttcgtgatgccgtgagctggtttg 6266373  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||||| | ||||  ||||||||||||||||||||   |||||| ||| |||||| ||| ||| ||||| ||||| |  ||||||||      
T  6266374 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttactcgttaagtttccatgataaggaatggtcgtttcttgggacga 6266473  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||| |  ||||||||||||| |||||||||||||||||||||  || | ||| | |||||||||||||||||||||||||    
T  6266474 acgcaccaatcgtgacacgacctggaaatcgtgacacgattttatcagtggagggctagtatttaagtgttcttgtgcag 6266553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 469 - 629
Target Start/End: Original strand, 36757536 - 36757692
Alignment:
Q  469 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagt 568  Q
    |||||||||||| ||||||||||||| |||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||| |||||||||||||    
T  36757536 gagagaaacttgaattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaacaccttgggtagt 36757633  T
Q  569 gaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat 629  Q
    || || |||||||||||||||||| |||||||||| |||||||||||| ||||||||||||    
T  36757634 ga-gatttcaccattggaaggatcaaaagcttccttttgtgtcttctc-tttagggttcat 36757692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 466 - 619
Target Start/End: Original strand, 28258948 - 28259098
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||| ||| |||  |||||||||||||   ||||||||||| || |||||||    
T  28258948 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttatagtgaggatctcttgggttgg--gaaacattgtaaacatcttgggt 28259045  T
Q  566 agtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttt 619  Q
    ||||| || |||||||||||||||||| |||||||||| |||||||||||||||    
T  28259046 agtga-gatttcaccattggaaggatcaaaagcttccttttgtgtcttctcttt 28259098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 466 - 618
Target Start/End: Original strand, 33528395 - 33528545
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||| ||| ||||||    
T  33528395 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaacacattgggt 33528492  T
Q  566 agtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||| || ||||||||||||||||||  |||||||||| |||||| |||||||    
T  33528493 agtga-gatttcaccattggaaggatcaaaaagcttccttttgtgttttctctt 33528545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 464 - 618
Target Start/End: Original strand, 14698778 - 14698930
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    ||||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  ||||| |||||||   ||||||||||| ||||||||    
T  14698778 ttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctctcgggttgg--gaaacattgtaaacaccttgg 14698875  T
Q  564 gtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||||| || ||||| ||||||||||||  |||||||||| |||||| |||||||    
T  14698876 gtagtga-gatttcactattggaaggatcaaaaagcttccttttgtgttttctctt 14698930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 464 - 618
Target Start/End: Complemental strand, 33118463 - 33118311
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    ||||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||||||||||    |||||||||| ||||||||    
T  33118463 ttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgg--ggaacattgtaaacaccttgg 33118366  T
Q  564 gtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||||| || ||| ||||||||||||||  |||||||||| |||||| |||||||    
T  33118365 gtagtga-gatttcgccattggaaggatcaaaaagcttccttttgtgttttctctt 33118311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 469 - 618
Target Start/End: Complemental strand, 21630268 - 21630121
Alignment:
Q  469 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagt 568  Q
    |||||||||||||||||||||||||| |||   || ||||||||||||||||| |||  |||||||||||||   ||||||||||| |||||||||||||    
T  21630268 gagagaaacttggattacaaaggaggtaactttagtgttgagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaacaccttgggtagt 21630171  T
Q  569 gaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    || || ||||||||||||||||||  |||||||||| |||||| |||||||    
T  21630170 ga-gatttcaccattggaaggatcaaaaagcttccttttgtgttttctctt 21630121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 469 - 618
Target Start/End: Complemental strand, 34389174 - 34389027
Alignment:
Q  469 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagt 568  Q
    |||||||||||||||||||||||||| |||   ||||||| |||||||||||| |||  |||||||||||||   ||||||||||| |||||||||||||    
T  34389174 gagagaaacttggattacaaaggaggtaactttagggttgtgtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaacaccttgggtagt 34389077  T
Q  569 gaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    || || ||||||||||||||||||  |||||||||| |||||| |||||||    
T  34389076 ga-gatttcaccattggaaggatcaaaaagcttccttttgtgttttctctt 34389027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 469 - 618
Target Start/End: Original strand, 23078245 - 23078391
Alignment:
Q  469 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagt 568  Q
    |||||||||||||||||||||||||| |||    |||||||||||||||||   |||  ||||||||||||| |||  |||||||| |||||||||||||    
T  23078245 gagagaaacttggattacaaaggaggtaacttttgggttgagtgtctttgtgatgagaatctcttgggttgggaaa--cattgtaaacaccttgggtagt 23078342  T
Q  569 gaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctctt 618  Q
    ||| | |||| ||||||||||||| |||||||||| ||||||||||||||    
T  23078343 gag-atttcatcattggaaggatcaaaagcttccttttgtgtcttctctt 23078391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 160 - 435
Target Start/End: Complemental strand, 19345010 - 19344733
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gttt 258  Q
    |||||| | ||| ||||||||||||||| ||||||||||| | ||||||| | |||||| |  ||||||| |||||   | | || ||||||| | ||||    
T  19345010 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgatacgatcgga-gatgccgtgagccaagttt 19344912  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    || ||| || ||||| |||| ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||  |||| |||||     
T  19344911 gctggaagcaaaatcatggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacctggggacc 19344813  T
Q  359 tacgtaaatcgtgacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
       | | ||| |||||||||||  |||||||||| ||||||||| || | | | ||||||||||| ||||||||||||||    
T  19344812 gttgcagatcatgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgc 19344733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 44310483 - 44310551
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaag 241  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  44310483 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaag 44310551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 174 - 435
Target Start/End: Complemental strand, 19349854 - 19349591
Alignment:
Q  174 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gtttgcaggacgccaaat 272  Q
    |||||||||||||| ||||||||||| | ||||||| | | |||| |  |||||||||||||   | | || ||||||| | |||||| ||| || ||||    
T  19349854 ttcaaatttgtggtttggaagaacagaggaatcgtgtcgcaatttggcaatcgtgacacgatcgga-gatgccgtgagccaagtttgctggaagcaaaat 19349756  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| |||||||||||||||||||||||||||||||||||| |  |||||||||  ||| |||||||||||  ||||  ||||    | | |||||||    
T  19349755 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgttggttaagtatctctgataaggactggtc-aacctgaggaccgttgcagatcgtga 19349657  T
Q  373 cacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
    ||||||||  |||||||||| ||||||||| || | | | ||||||||||| ||||||||||||||    
T  19349656 cacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgc 19349591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 464 - 609
Target Start/End: Original strand, 10445236 - 10445379
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    |||||||||||||||| |||||||||||||| |||   |||||||| ||||||||||| |||  ||||| |||||||   ||||||||||| ||||||||    
T  10445236 ttagagagagaaacttagattacaaaggaggtaactttagggttgaatgtctttgtagtgaggttctctcgggttgg--gaaacattgtaaacaccttgg 10445333  T
Q  564 gtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtg 609  Q
    ||||||| || ||||||||||||||||||  |||||||||| |||||    
T  10445334 gtagtga-gatttcaccattggaaggatcaaaaagcttccttttgtg 10445379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 32247356 - 32247276
Alignment:
Q  156 ttattgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgattt 237  Q
    |||||||||| ||| | ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  32247356 ttattgttgatattgg-cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt 32247276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 466 - 618
Target Start/End: Complemental strand, 13569655 - 13569505
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    |||||||||||||||||||||||| |||  |||   |||||| ||||||||||||| |||  |||||||||||||   ||||||| ||| |||||||| |    
T  13569655 agagagagaaacttggattacaaatgagataactttagggttaagtgtctttgtagtgaggatctcttgggttgg--gaaacattataaacaccttggat 13569558  T
Q  566 agtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||| || ||||||||||||||||||  |||||||||| |||||| |||||||    
T  13569557 agtga-gatttcaccattggaaggatcaaaaagcttccttttgtgttttctctt 13569505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 466 - 610
Target Start/End: Complemental strand, 20522548 - 20522406
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    |||||||||||||| |||||||||||||| |||   |||||||||||||||||||| |||| |||||||||||||   || |||||||| || |||||||    
T  20522548 agagagagaaacttagattacaaaggaggtaactttagggttgagtgtctttgtagtgagtatctcttgggttgg--gaagcattgtaaacaacttgggt 20522451  T
Q  566 agtgaggagttcaccattggaaggatc-taaagcttcctcttgtgt 610  Q
    ||||| || ||||||||| ||| ||||  |||||||||| ||||||    
T  20522450 agtga-gatttcaccatttgaatgatcaaaaagcttccttttgtgt 20522406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 466 - 618
Target Start/End: Original strand, 8389920 - 8390070
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||  |||   ||||||||| |||||||||| ||   |||||||||||  |  ||||||||||| |||||||| |    
T  8389920 agagagagaaacttggattacaaaggagataactttagggttgagggtctttgtagtgatgatctcttgggtt--aggaaacattgtaaacaccttggat 8390017  T
Q  566 agtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||| || || ||||||||||| |||  ||||||||||||||||| |||||||    
T  8390018 agtga-gattttaccattggaagaatcaaaaagcttcctcttgtgttttctctt 8390070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 466 - 618
Target Start/End: Original strand, 10707023 - 10707173
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    |||||||||||||| |||||||||||||| |||   |||||| | | ||||||||| |||  ||||||||||||  | ||||||||||| ||||||||||    
T  10707023 agagagagaaacttagattacaaaggaggtaactttagggtttattatctttgtagtgaggatctcttgggttg--agaaacattgtaaacaccttgggt 10707120  T
Q  566 agtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||| | || ||||||||| ||||||||  |||||||||| |||||| |||||||    
T  10707121 agtta-gatttcaccattagaaggatcaaaaagcttccttttgtgttttctctt 10707173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 582 - 632
Target Start/End: Complemental strand, 25398710 - 25398660
Alignment:
Q  582 ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25398710 ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 25398660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 582 - 632
Target Start/End: Complemental strand, 25403848 - 25403798
Alignment:
Q  582 ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25403848 ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 25403798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 582 - 632
Target Start/End: Complemental strand, 25407837 - 25407787
Alignment:
Q  582 ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25407837 ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 25407787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 462 - 618
Target Start/End: Complemental strand, 31056376 - 31056219
Alignment:
Q  462 gcttagagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttggaaaaaacattgtaatcac 558  Q
    |||| ||||||||||||||| | ||||||||||| |||   |||||||||||||||||||| |||  |||||||  |||||| |||  |||||||| |||    
T  31056376 gctttgagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacac 31056279  T
Q  559 cttgggtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    |||||||||||| || |||||||||| |||||||  |||||||||| |||||| |||||||    
T  31056278 cttgggtagtga-gatttcaccattgaaaggatcaaaaagcttccttttgtgttttctctt 31056219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 475 - 618
Target Start/End: Complemental strand, 17865522 - 17865381
Alignment:
Q  475 aacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgaggag 574  Q
    |||||||||||||||||||| |||   |||||||||||||||||||| ||   |||||||||||||   ||||||||||| ||||||||||||||| ||     
T  17865522 aacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaagatctcttgggttgg--gaaacattgtaaacaccttgggtagtga-gat 17865426  T
Q  575 ttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||| | | ||||||||  |||||||||| |||||| |||||||    
T  17865425 ttcacaaatagaaggatcaaaaagcttccttttgtgttttctctt 17865381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 462 - 618
Target Start/End: Original strand, 34682097 - 34682254
Alignment:
Q  462 gcttagagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttggg--ttggaaaaaacattgtaatcac 558  Q
    |||| ||||||||||||||| | ||||||||||| |||   |||||||||||||||||||| |||  ||||||| |  ||||||||  |||||||| |||    
T  34682097 gctttgagagagaaacttgggaatacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagagttggaaaa--cattgtaaacac 34682194  T
Q  559 cttgggtagtgaggagttcaccattggaaggatctaaa-gcttcctcttgtgtcttctctt 618  Q
    |||||||||||| || ||||||| | |||||||| ||| | ||||| |||||| |||||||    
T  34682195 cttgggtagtga-gatttcaccacttgaaggatcaaaatgtttccttttgtgttttctctt 34682254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 28258668 - 28258729
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 220  Q
    ||||||| ||||| ||||||||||||||| ||||| ||||| ||||||||||||||||||||    
T  28258668 ttgttgaaatttggcttcaaatttgtggtttggaaaaacagagaaatcgtgacacgattttg 28258729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 462 - 632
Target Start/End: Complemental strand, 8040397 - 8040227
Alignment:
Q  462 gcttagagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctctt--gggttggaaaaaacattgtaatcac 558  Q
    |||| ||||||||||||||| | ||||||||||| |||   | |||||||||||||||||| ||   ||||||  |||||||   ||||||||||| |||    
T  8040397 gctttgagagagaaacttggtaatacaaaggaggtaactttatggttgagtgtctttgtagtgaagttctcttgagggttgg--gaaacattgtaaacac 8040300  T
Q  559 cttgggtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    |||||||||||| || ||||||||||||||||||  |||||||||| || ||| || ||| ||||| ||||||||    
T  8040299 cttgggtagtga-gatttcaccattggaaggatcaaaaagcttccttttatgt-ttttctcttaggattcatatt 8040227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 464 - 592
Target Start/End: Complemental strand, 35397839 - 35397712
Alignment:
Q  464 ttagagagagaaacttggat--tacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcacctt 561  Q
    ||||||||||||||||| |   |||||||||||  ||   |||||||| ||||||||||| |||  |||  ||||||||||||  ||||||||| |||||    
T  35397839 ttagagagagaaacttgaaaaatacaaaggaggtcactttagggttgattgtctttgtagtgaggttcttctgggttggaaaa--cattgtaattacctt 35397742  T
Q  562 gggtagtgaggagttcaccattggaaggatc 592  Q
    ||||||||| || ||||||||||||||||||    
T  35397741 gggtagtga-gatttcaccattggaaggatc 35397712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 484 - 591
Target Start/End: Original strand, 2837816 - 2837923
Alignment:
Q  484 tacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttggaaaaaacattgtaatcaccttgggtagtgaggagttcacca 581  Q
    ||||||||||| |||   |||||||||||||||||||| |||  |||||||  |||||| |||  |||||||| |||||||| ||||||| | |||||||    
T  2837816 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttggatagtgagaatttcacca 2837913  T
Q  582 ttggaaggat 591  Q
    ||||||||||    
T  2837914 ttggaaggat 2837923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 502 - 618
Target Start/End: Complemental strand, 39483223 - 39483109
Alignment:
Q  502 agggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatc-taaagctt 600  Q
    |||||||||||||||||| | |||  |||||||||||||   ||| ||||||| ||||||||||||||| || ||||||||||||| ||||  ||| |||    
T  39483223 agggttgagtgtctttgttgtgaggatctcttgggttgg--gaaatattgtaaacaccttgggtagtga-gatttcaccattggaatgatcaaaaaactt 39483127  T
Q  601 cctcttgtgtcttctctt 618  Q
    ||| |||||| |||||||    
T  39483126 ccttttgtgttttctctt 39483109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 8389636 - 8389681
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  8389636 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 8389681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 290 - 435
Target Start/End: Complemental strand, 32247244 - 32247097
Alignment:
Q  290 aaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtgacacgatct--ggaaatc 387  Q
    |||||||| |||||||||||||||||||| |||||||||  ||| || ||||||||  |||| |||||    | | |||||||||||||||  |||||||    
T  32247244 aaatcgtggcacgattcagaaacttgctcgttaagtatcactgataaagactggtc-aacctggggaccgttgcagatcgtgacacgatctagggaaatc 32247146  T
Q  388 gtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgc 435  Q
    ||| ||||||||| || | ||| ||||||||| ||  ||||||||||||    
T  32247145 gtggcacgatttcttcaggggaggactagtatatattgtgttcttgtgc 32247097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 36757430 - 36757477
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 220  Q
    ||||||||||||||| |||||||||||  |||||||||||||||||||    
T  36757430 cttcaaatttgtggtttggaagaacagaaaaatcgtgacacgattttg 36757477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 33528093 - 33528155
Alignment:
Q  156 ttattgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    |||||||||  | ||| ||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  33528093 ttattgttgttaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacaattt 33528155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 466 - 609
Target Start/End: Complemental strand, 40015251 - 40015110
Alignment:
Q  466 agagagagaaactt-ggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttggg 564  Q
    ||||||||||| || || |||||||||||| |||   |||||||||||| ||||||  |||  ||||||||||||| |||  |||||||| ||| ||||     
T  40015251 agagagagaaatttaggtttacaaaggaggtaactttagggttgagtgt-tttgtattgaggttctcttgggttgggaaa--cattgtaaacacattgga 40015155  T
Q  565 tagtgaggagttcaccattggaaggatc-taaagcttcctcttgtg 609  Q
    ||||||| | ||||||||||||||||||  |||||||||| |||||    
T  40015154 tagtgag-atttcaccattggaaggatcaaaaagcttccttttgtg 40015110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 2869501 - 2869582
Alignment:
Q  504 ggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgaggagttcaccattggaag 588  Q
    |||||||||||||||||| |||  ||||||| |||||  |||||||||||| ||| ||||||||||| || ||| ||||||||||    
T  2869501 ggttgagtgtctttgtagtgaggttctcttgagttgg--aaaacattgtaaacacattgggtagtga-gatttcgccattggaag 2869582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 10706738 - 10706783
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    |||||||||||| || ||||||||||| ||||||||||||||||||    
T  10706738 cttcaaatttgttgtttggaagaacagagaaatcgtgacacgattt 10706783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 21630556 - 21630511
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    |||||||||||| || ||||||||||| ||||||||||||||||||    
T  21630556 cttcaaatttgtagtttggaagaacagagaaatcgtgacacgattt 21630511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 39483488 - 39483443
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  39483488 cttcaaatttgtggtttggaagaacagagaaattgtgacacgattt 39483443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 502 - 571
Target Start/End: Original strand, 41586357 - 41586425
Alignment:
Q  502 agggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgag 571  Q
    |||||||||||||||||  |||||  ||||||||||||||||| |  |||||| ||||||||||||||||    
T  41586357 agggttgagtgtctttggtgagagcttctcttgggttggaaaaca-gttgtaaacaccttgggtagtgag 41586425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 33118752 - 33118696
Alignment:
Q  158 attgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacg 214  Q
    |||||||| ||||||||||||||||||| | ||| |||| || ||||||||||||||    
T  33118752 attgttgaaatttgtcttcaaatttgtgttttgggagaatagagaaatcgtgacacg 33118696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 502 - 587
Target Start/End: Original strand, 1344351 - 1344435
Alignment:
Q  502 agggttgagtgtctttgtagagagtgtctcttg-ggttggaaaaaacattgtaatcaccttgggtagtgaggagttcaccattggaa 587  Q
    |||||||||||||||||||| |||  ||||||| |||||| |||  |||||||| || ||| ||||||||| | |||||||||||||    
T  1344351 agggttgagtgtctttgtagtgaggttctcttgaggttgggaaa--cattgtaaacatcttcggtagtgagaatttcaccattggaa 1344435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 212
Target Start/End: Complemental strand, 20522833 - 20522794
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgaca 212  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  20522833 cttcaaatttgtggtttggaagaacagagaaatcgtgaca 20522794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 521 - 564
Target Start/End: Complemental strand, 32247011 - 32246968
Alignment:
Q  521 gagagtgtctcttgggttggaaaaaacattgtaatcaccttggg 564  Q
    |||||||| |||| |||||| |||||||||||||||||||||||    
T  32247011 gagagtgtttcttaggttgggaaaaacattgtaatcaccttggg 32246968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 23077957 - 23078002
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||| || |||| ||||||||||| ||||||||||||||||||    
T  23077957 cttcaaaattttggtttggaagaacagagaaatcgtgacacgattt 23078002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 330; Significance: 0; HSPs: 101)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 173 - 632
Target Start/End: Original strand, 40372268 - 40372727
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  40372268 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaat 40372367  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| || ||  ||| ||||||||     
T  40372368 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcatacctgggaacggacgcaaatcgtgc 40372467  T
Q  373 cacgatctggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgcagnnnnnnnagagagagcttggaagagcttagagag 471  Q
    |||||||||||||||||||||||||||| || ||||||||||||||| ||  ||||||||||||||         |||||||||||||||||||||||||    
T  40372468 cacgatctggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgcagatttgta--agagagcttggaagagcttagagag 40372565  T
Q  472 agaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgag 571  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  40372566 agaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 40372665  T
Q  572 gagttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    |||||||  | |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  40372666 gagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 40372727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 173 - 632
Target Start/End: Complemental strand, 8477990 - 8477530
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||| |||||||    
T  8477990 cttcaaatttgtggtctggaagaacagagaaattgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgctggatgccaaat 8477891  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||| |||||||||   |||| |||||||||    
T  8477890 cgtggcacgatcttgggaaatcgtgacacgattgagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtga 8477791  T
Q  373 cacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttggaagagcttagagaga 472  Q
    |||||||||||||||||||||||||| | || ||||||| ||||||||||||||||||||||            ||||||||||||||||||||||||||    
T  8477790 cacgatctggaaatcgtgacacgattgcttcagaggaaggctagtatttaagtgttcttgtgttcatttttggaagagagcttggaagagcttagagaga 8477691  T
Q  473 gaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgagg 572  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8477690 gaaacttggattacagaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgagg 8477591  T
Q  573 agttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    ||||||  | |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8477590 agttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 8477530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 302; E-Value: 1e-169
Query Start/End: Original strand, 173 - 632
Target Start/End: Complemental strand, 7167870 - 7167410
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  7167870 cttcaaatttgtgttctggaagaacagagaaatcgtgacacgattttggcatcgtgacacaatttcaaggtgccgtgagctagtttgcaggacgccaaat 7167771  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||  ||| ||||||||||| ||||||||| || ||| |||||||||    
T  7167770 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcataccttgggtcagacgcaaatcgtga 7167671  T
Q  373 cacgatctggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgcagnnnnnnnagagagagcttggaagagcttagagag 471  Q
    |||||| || ||||| || ||||||||| || ||||||||||||||| ||  ||||||||||||||        || |||||||||||||||||||||||    
T  7167670 cacgatttgaaaatcatggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcagatttgg--gatagagcttggaagagcttagagag 7167573  T
Q  472 agaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggtt-ggaaaaaacattgtaatcaccttgggtagtga 570  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7167572 agaaacttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaaacattgtaatcaccttgggtagtga 7167473  T
Q  571 ggagttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    ||||||||  | |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7167472 ggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 7167410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 173 - 632
Target Start/End: Original strand, 28503331 - 28503795
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||    
T  28503331 cttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgctggacgccaaat 28503430  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| |||||||||||||||||||||| |||||||||||||||| |||||||||| ||| ||||||| |||  |||||||| || ||| |||||||||    
T  28503431 cgtggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaagtatccctgataaggacttgtc-aaccttgggtcagacgcaaatcgtga 28503529  T
Q  373 cacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgcagnnnnnnnagagagagcttggaagagcttagag 469  Q
    ||||||||  |||||||||| ||||||| | || ||||||||||||||| ||  ||||||||||||         |  ||||||||||||||||||||||    
T  28503530 cacgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc--ttttttgaaggagagcttggaagagcttagag 28503627  T
Q  470 agaga---aacttggattacaaaggagggaacc-aaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    |||||   ||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||    
T  28503628 agagagagaacttggataacaaaggagggaaccaaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgggt 28503727  T
Q  566 agtgaggagttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    |||||||||||||  | |||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  28503728 agtgaggagttcattagttggaaggatctaaagcttcctctagtgacttctcttttagggttcatatt 28503795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 223 - 632
Target Start/End: Original strand, 9090823 - 9091232
Alignment:
Q  223 atcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcatta 322  Q
    ||||||||| |||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  9090823 atcgtgacatgatttcaaggtgccgtgagctagtttgcaggacgctaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtta 9090922  T
Q  323 agtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtattta 422  Q
    ||||||||||| ||||||||||| |||||||| ||  ||| ||||||||||| ||||||||||||||| ||||||| | || ||||||| ||||||| ||    
T  9090923 agtatccttgataaggactggtcataccttggaacggacgcaaatcgtgacatgatctggaaatcgtggcacgattgcttcagaggaagtctagtatata 9091022  T
Q  423 a-gtgttcttgtgcagnnnnnnnagagagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtag 521  Q
      ||||||||||||         |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9091023 ttgtgttcttgtgc--ttttttgaaggagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtag 9091120  T
Q  522 agagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgaggagttcacca-ttggaaggatctaaagcttcctcttgtgtcttctctttt 620  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||  | ||| |||||||||||||||||||| |||||||||||| |    
T  9091121 agagtatctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttgaaaggatctaaagcttcctctagtgtcttctcttct 9091220  T
Q  621 agggttcatatt 632  Q
    ||||||||||||    
T  9091221 agggttcatatt 9091232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 173 - 632
Target Start/End: Original strand, 28501164 - 28501628
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||    
T  28501164 cttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgcaggacaccaaat 28501263  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||| ||| ||||||| |||  |||||||| || ||| ||||| |||    
T  28501264 cgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggacttgtc-aaccttgggtcagacgcaaatcatga 28501362  T
Q  373 cacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgcagnnnnnnnagagagagcttggaagagcttagag 469  Q
    ||||||||  |||||||||| ||||||| | || ||||||||||||||| ||  |||| |||||||         |  ||||||||||||||||||||||    
T  28501363 cacgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgtacttgtgc--ttttttgaaggagagcttggaagagcttagag 28501460  T
Q  470 agaga---aacttggattacaaaggagggaacc-aaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    |||||   ||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  28501461 agagagagaacttggataacaaaggagggaaccaaaagggatgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 28501560  T
Q  566 agtgaggagttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    |||||||||||||  | |||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  28501561 agtgaggagttcattagttggaaggatctaaagcttcctctagtgacttctcttttagggttcatatt 28501628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 223 - 632
Target Start/End: Original strand, 8738585 - 8738994
Alignment:
Q  223 atcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcatta 322  Q
    ||||||||| |||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  8738585 atcgtgacatgatttcaaggtgccgtgagctagtttgcaggacgctaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtta 8738684  T
Q  323 agtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtattta 422  Q
    ||||||||||| ||||||||||| |||||||| ||  ||| ||||||||||| ||||||||||||||| ||||||| | || ||||||| ||||||| ||    
T  8738685 agtatccttgataaggactggtcataccttggaacggacgcaaatcgtgacatgatctggaaatcgtggcacgattgcttcagaggaagtctagtatata 8738784  T
Q  423 a-gtgttcttgtgcagnnnnnnnagagagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtag 521  Q
      ||||||||||||         |  ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  8738785 ttgtgttcttgtgc--ttttttgaaggagagcttggaagagcttagagagagaaacttggattgcaaaggagggaaccaatgggttgagtgtctttgtag 8738882  T
Q  522 agagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgaggagttcacca-ttggaaggatctaaagcttcctcttgtgtcttctctttt 620  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||  | ||| |||||||||||||||||||| |||||||||||| |    
T  8738883 agagtatctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttgaaaggatctaaagcttcctctagtgtcttctcttct 8738982  T
Q  621 agggttcatatt 632  Q
    ||||||||||||    
T  8738983 agggttcatatt 8738994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 207 - 632
Target Start/End: Original strand, 2671111 - 2671517
Alignment:
Q  207 gtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattc 306  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||     
T  2671111 gtgacacgattttggcatcgtgacatgatttcaaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattt 2671210  T
Q  307 agaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtgacacgatctggaaatcgtgacacgatttcctctga 406  Q
    |||||||||||| |||||||||||||| ||||||||||| |||||||||   |||| ||||||||                   |||||||||| || ||    
T  2671211 agaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtg-------------------acacgatttcttcaga 2671291  T
Q  407 ggaagactagtattta-agtgttcttgtgcagnnnnnnnagagagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaaggg 505  Q
    ||||||||||||| ||  ||||||||||||||        || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2671292 ggaagactagtatatattgtgttcttgtgcagatttgt--gaaagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaaggg 2671389  T
Q  506 ttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgaggagttcacca-ttggaaggatctaaagcttcctc 604  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||    
T  2671390 ttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctc 2671489  T
Q  605 ttgtgtcttctcttttagggttcatatt 632  Q
    | ||||||||||||||||||||||||||    
T  2671490 tagtgtcttctcttttagggttcatatt 2671517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 160 - 632
Target Start/End: Complemental strand, 1306604 - 1306113
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| |||||||||| |||||||||||||||| |||||||||||| || ||||||||||||||||||||||  ||||||||||||| |||||    
T  1306604 tgttgagatttggcttcaaatttatggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacacgatttcgtggtgtcgtgagctggtttg 1306505  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||||| | |||||||||||||||||||||||||||  |||||||||| |||||| |||  || |||||| |||| ||||||| ||| |    
T  1306504 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattctcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacgt 1306405  T
Q  360 acgta---------------------aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagn 438  Q
    |||||                     |||||||||||||  ||||||||||||||||||||  || | |||||||||||||||||||||||||||||||     
T  1306404 acgtaccaatcgtgacacgacttggaaatcgtgacacgacttggaaatcgtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcagt 1306305  T
Q  439 nnnnnnagagagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggtt 538  Q
          || |||||||||||||||||||||||||||||||||||||| ||||||||||||   || ||||||||||||||||| |||  |||||||||||    
T  1306304 ttttggag-gagagcttggaagagcttagagagagaaacttggattataaaggagggaactctagagttgagtgtctttgtagtgaggatctcttgggtt 1306206  T
Q  539 ggaaaaaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    || ||||||||||||| ||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1306205 gggaaaaacattgtaaacaccttgggtagtga-gatttcaccattggaaggatcttaagcttcctcttgtgtcttctcttttagggttcatatt 1306113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 160 - 629
Target Start/End: Original strand, 33386137 - 33386595
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| |||||||||||||||| | |||||||| ||||||||||||||| |||||||||||||||||||||   | || |||||||| |||||    
T  33386137 tgttgagatttggcttcaaatttgtggtccgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 33386236  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||||| | |||| ||| | |||||||||||||||   |||||||||  |||||| | |  || ||||  ||||| || |||||| | |    
T  33386237 cagggtgccaaatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggt-tggtcgtatcttgggtcgt 33386335  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttgg 457  Q
    |||||  |||||||||||||| ||||||| ||| ||||||||  || |  ||||||| ||||||||||||||||||||||       ||  ||||||||     
T  33386336 acgtatcaatcgtgacacgatttggaaattgtggcacgattttatcagctgaagactggtatttaagtgttcttgtgcagattttggagt-agagcttga 33386434  T
Q  458 aagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatca 557  Q
    |        ||||||||||||||||||||||||||| ||||   |||||||||||||||||||| |||  ||||||||||||  | ||||||||||| ||    
T  33386435 a--------gagagagaaacttggattacaaaggagagaactttagggttgagtgtctttgtagtgaggatctcttgggttg--agaaacattgtaaaca 33386524  T
Q  558 ccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat 629  Q
    |||||||||||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  33386525 ccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgtcttctcttttagggttcat 33386595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 177 - 437
Target Start/End: Original strand, 27352097 - 27352358
Alignment:
Q  177 aaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtg 276  Q
    ||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| || ||||||||||    
T  27352097 aaatttgtggtctcgaagaacagaaaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagcttgtttgcagaacaccaaatcgtg 27352196  T
Q  277 gcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtgacacg 376  Q
    || ||||||||||||||||||||||||||||||||||||||| |||| ||||  ||| ||||||||||| |||||||||||  ||| |||||||||||||    
T  27352197 gcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaattatcactgataaggactggtcataccttgggacggacgcaaatcgtgacacg 27352296  T
Q  377 atctggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgcag 437  Q
    || ||||||||||| ||||||| | || ||||||| ||| ||| ||  ||||||||||||||    
T  27352297 atttggaaatcgtggcacgattgcttcagaggaaggctaatatatattgtgttcttgtgcag 27352358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 160 - 632
Target Start/End: Complemental strand, 32143928 - 32143486
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||      ||||             || ||||||||||||||    
T  32143928 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgatttt------gtga-------------tgccgtgagctagtttg 32143848  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||||| | |||||||| | |||||||||||||||   |||||||||| |||||| | |  || |||||| |||| ||||||| ||| |    
T  32143847 cagggtgccaaatcgtgacacgatcttgtggaatcgtgacacgattttcaaacttgctcgttaagttttcaagataaggacaggtcgtaccttgtgacgt 32143748  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttgg 457  Q
    |||||  |||||||||||||| ||||||||||||||||||||  || |  ||||||| ||||||||||||||||||||||       || ||||| |||     
T  32143747 acgtatcaatcgtgacacgatttggaaatcgtgacacgattttatcagttgaagacttgtatttaagtgttcttgtgcagattttggag-gagag-ttg- 32143651  T
Q  458 aagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatca 557  Q
            ||||||||||| |||||||||||||||||||||   |||||||||||||||||||| ||   |||||||||||||  |||||||||||| ||    
T  32143650 -------aagagagagaaatttggattacaaaggagggaactctagggttgagtgtctttgtagtgatgatctcttgggttgg--aaaacattgtaaaca 32143560  T
Q  558 ccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    ||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32143559 ccttgggtagtga-gatttcaccattggaaggatcaaaagcttcctcttgtgtcttctcttttagggttcatatt 32143486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 160 - 632
Target Start/End: Complemental strand, 27453581 - 27453123
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| |||||||||||||||||| |||| ||| ||||| ||||||||| |||||||||||||||||||||   | || |||||||| |||||    
T  27453581 tgttgagatttggcttcaaatttgtggtctgaaagagcagagaaattgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 27453482  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
     |||  ||||||||||| |  |||  || | |||||||||||||||   |||||||||  |||||| | |  || ||||  ||||| ||||||| ||| |    
T  27453481 tagggtgccaaatcgtgacatgattgtgtggaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggt-tggtcgtaccttgtgacgt 27453383  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttgg 457  Q
    |||||  |||||||||||||| ||||||||||| ||||||||  || |  |||||||||| |||||||||||||||||||       ||||||  ||||     
T  27453382 acgtatcaatcgtgacacgatttggaaatcgtggcacgattttatcagttgaagactagtttttaagtgttcttgtgcagtttttgaagagag--cttga 27453285  T
Q  458 aagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatca 557  Q
    |        ||||||||||||||||||||||||||||||||   ||||||||||||||  |||| |||  ||||||||||||| |||  |||||||| ||    
T  27453284 a--------gagagagaaacttggattacaaaggagggaactttagggttgagtgtct--gtagtgaggatctcttgggttggcaaa--cattgtaaaca 27453197  T
Q  558 ccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    |||||||||||||| | |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  27453196 ccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgtcttctcttttagggttcatatt 27453123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 173 - 345
Target Start/End: Original strand, 22172674 - 22172846
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||    
T  22172674 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagccagtttgcaggacgccaaat 22172773  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtc 345  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||  ||| |||||||||||    
T  22172774 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaaggatctctgataaggactggtc 22172846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 160 - 437
Target Start/End: Complemental strand, 23198530 - 23198251
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||   | || |||||||| |||||    
T  23198530 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgagctggtttg 23198431  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||||| | |||| | | | |||||||||||||||   |||||||||| |||||| |||  || ||||||||||| ||||||| ||| |    
T  23198430 cagggtgccaaatcgtgacacgatttggaggaatcgtgacacgatttgcaaacttgctcgttaagtttccaggataaggactggtcgtaccttgtgacgt 23198331  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    |||||  |||||||||||||| ||||||||||||||||||||  || | |||||||||||||||||||||||||||||||    
T  23198330 acgtaccaatcgtgacacgatttggaaatcgtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcag 23198251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 159 - 437
Target Start/End: Original strand, 25637012 - 25637290
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-t 257  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| || |||||||  |    
T  25637012 ttgttgagatt-gtctttaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcgaggtg-cgagagctagggt 25637109  T
Q  258 tgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggac 357  Q
    ||||||    ||||||||||| ||||  |||||||||||||||||||   ||||||||||| |||||||||||||| ||||||||||| | |||||||||    
T  25637110 tgcaggggtgcaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 25637209  T
Q  358 atacgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
      ||| |||||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  25637210 ggacgcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 25637290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 158 - 632
Target Start/End: Original strand, 26928078 - 26928522
Alignment:
Q  158 attgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtt 257  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||     || |||||||| |||    
T  26928078 attgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgttatgccgtgagctggtt 26928177  T
Q  258 tgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggac 357  Q
    ||||||  ||||||||||| | | |||||| | |||||||||||||||   |||||||||| |||||| | |  || |||||| |||| ||||||| |||    
T  26928178 tgcagggtgccaaatcgtgacacaatcttgtggaatcgtgacacgattttcaaacttgctcgttaagttttcaggataaggacaggtcgtaccttgtgac 26928277  T
Q  358 atacgtaaatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttgg 457  Q
     ||||||             ||    ||||||||||||||||  || |  ||||||| ||||||||||||||||||||||       || ||||| |||     
T  26928278 ttacgta-------------tc----aatcgtgacacgattttatcagttgaagacttgtatttaagtgttcttgtgcagattttggag-gagag-ttg- 26928357  T
Q  458 aagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatca 557  Q
            ||||||| |||||||||||||||| ||||||||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||| ||    
T  26928358 -------aagagagaaaaacttggattacaaacgagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaaca 26928448  T
Q  558 ccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    ||||||||| ||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  26928449 ccttgggtaatga-gatttcaccattggaaggatcaaaagcttcctcttgtgtcttctcttttagggttcatatt 26928522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 159 - 437
Target Start/End: Original strand, 6716084 - 6716361
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagttt 258  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||| |||||||||| ||    
T  6716084 ttgttgagatt-gtcttgaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt 6716182  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    |||||  || |||||||| | ||||  |||||||||||||||||||   ||||||||||| |||||||||||||| ||||||||||| |  ||||||       
T  6716183 gcagggtgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtgg 6716282  T
Q  359 tacgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||||   ||||||||||||| ||| ||||||||||||||||||  | |||||||||||||| | ||||||||||||||||    
T  6716283 tacgcggatcgtgacacgatttggaaaatcgtgacacgatttcaacagaggaagactagta-taaagtgttcttgtgcag 6716361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 160 - 437
Target Start/End: Original strand, 54634710 - 54634986
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||| |||||||||  |||    
T  54634710 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcattgtgacacgatttcggggtgccgtgagctaagttg 54634808  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  || |||||||||| ||||  |||||||||||||||||||   ||||||||||| |||||||||||||| |||||||||||||  ||||||   |    
T  54634809 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcttttcttgggtggt 54634908  T
Q  360 acgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||| ||||| |||||||||  || |||||||||||||||| |  | ||||||| |||||| | ||||||||||||||||    
T  54634909 acgcaaatcatgacacgattgggaaaatcgtgacacgattgcaacagaggaaggctagta-taaagtgttcttgtgcag 54634986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 160 - 437
Target Start/End: Complemental strand, 23200729 - 23200450
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||   | ||  ||||||| |||||    
T  23200729 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgctgtgagctggtttg 23200630  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||||| | |||| | | | |||||||||||||||   |||||||||| |||||| |||  || ||||||||||| ||||||| ||| |    
T  23200629 cagggtgccaaatcgtgacacgatttggaggaatcgtgacacgatttgcaaacttgctcgttaagtttccaggataaggactggtcgtaccttgtgactt 23200530  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    |||||  |||||||||||||| ||||||||||||||||||||  || | |||||||| ||||||||||||| ||||||||    
T  23200529 acgtaccaatcgtgacacgatttggaaatcgtgacacgattttatcagtggaagactggtatttaagtgtttttgtgcag 23200450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 160 - 437
Target Start/End: Complemental strand, 4599107 - 4598829
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-tt 258  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||  | || ||||||||||  ||    
T  4599107 tgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcg-gatgccgtgagctagggtt 4599010  T
Q  259 gcaggacgccaaatcgtggcgcgatct-tgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggac 357  Q
    |||||    ||||||||||| |||| | |||||||||||||||||||  |||||||||||| |||||||||||||| ||||||||||| | |||||||||    
T  4599009 gcaggggtgcaaatcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 4598910  T
Q  358 atacgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
      ||| |||||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  4598909 ggacgcaaatcgtgacacgattgggaaaatcgtgacacgattgaaacagaggaagactagtacttaagtgttcttgtgcag 4598829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 160 - 437
Target Start/End: Complemental strand, 4601328 - 4601050
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-tt 258  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||  | || ||||||||||  ||    
T  4601328 tgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcg-gatgccgtgagctagggtt 4601231  T
Q  259 gcaggacgccaaatcgtggcgcgatct-tgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggac 357  Q
    |||||    ||||||||||| |||| | |||||||||||||||||||  |||||||||||| |||||||||||||| ||||||||||| | |||||||||    
T  4601230 gcaggggtgcaaatcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 4601131  T
Q  358 atacgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
      ||| |||||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  4601130 ggacgcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 4601050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 173 - 435
Target Start/End: Complemental strand, 18657017 - 18656752
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtga-gctagtttgcaggacgccaaa 271  Q
    |||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||  |||| ||||| || ||||||||||||||||||    
T  18657017 cttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtgaagcaagtttgcaggacgccaaa 18656918  T
Q  272 tcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtg 371  Q
    ||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||  |||| |||||    | | ||||||    
T  18656917 tcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc-aacctggggaccgttgcagatcgtg 18656819  T
Q  372 acacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
    |||||||||  |||||||||| ||||||||| || | | | ||||||||||| ||||||||||||||    
T  18656818 acacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgc 18656752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 168 - 437
Target Start/End: Original strand, 10058034 - 10058305
Alignment:
Q  168 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-ttgcaggacg 266  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||  | || |||||| |||  |||||||       
T  10058034 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggt 10058132  T
Q  267 ccaaatcgtggcgcgatcttgggaaa-tcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaa 365  Q
     ||||||||| | |||| |||||||| ||||||||||||  |||||||||||| |||||||||||||| ||||||||||| | ||||||||| |||| ||    
T  10058133 gcaaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgtacgcaa 10058232  T
Q  366 atcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    |||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  10058233 atcgtgacacgattgggcaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 10058305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 168 - 437
Target Start/End: Original strand, 10060256 - 10060527
Alignment:
Q  168 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-ttgcaggacg 266  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||  | || |||||| |||  |||||||       
T  10060256 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggt 10060354  T
Q  267 ccaaatcgtggcgcgatcttgggaaa-tcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaa 365  Q
     ||||||||| | |||| |||||||| ||||||||||||  |||||||||||| |||||||||||||| ||||||||||| | ||||||||| |||| ||    
T  10060355 gcaaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgtacgcaa 10060454  T
Q  366 atcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    |||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  10060455 atcgtgacacgattgggcaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 10060527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 168 - 437
Target Start/End: Original strand, 10062478 - 10062749
Alignment:
Q  168 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-ttgcaggacg 266  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||  | || |||||| |||  |||||||       
T  10062478 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggt 10062576  T
Q  267 ccaaatcgtggcgcgatcttgggaaa-tcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaa 365  Q
     ||||||||| | |||| |||||||| ||||||||||||  |||||||||||| |||||||||||||| ||||||||||| | ||||||||| |||| ||    
T  10062577 gcaaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgtacgcaa 10062676  T
Q  366 atcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    |||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  10062677 atcgtgacacgattgggcaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 10062749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 168 - 437
Target Start/End: Original strand, 10064700 - 10064971
Alignment:
Q  168 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-ttgcaggacg 266  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||  | || |||||| |||  |||||||       
T  10064700 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggt 10064798  T
Q  267 ccaaatcgtggcgcgatcttgggaaa-tcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaa 365  Q
     ||||||||| | |||| |||||||| ||||||||||||  |||||||||||| |||||||||||||| ||||||||||| | ||||||||| |||| ||    
T  10064799 gcaaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgtacgcaa 10064898  T
Q  366 atcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    |||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  10064899 atcgtgacacgattgggcaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 10064971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 160 - 436
Target Start/End: Original strand, 800685 - 800963
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  | || |||||||| |||||    
T  800685 tgttgagatttgtcttcgaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 800784  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    | ||  ||||||||||| | ||||  ||||||||||||||||||||   |||||||||| |||||| ||| ||| ||||| ||||| |  ||||||||      
T  800785 cggggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggaatggtcgtttcttgggacga 800884  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgca 436  Q
    ||| |  ||||||||||||  |||||||||||||||||||||  || |  || | ||| ||||||||||||||||||||    
T  800885 acgcaccaatcgtgacacggcctggaaatcgtgacacgattttatcagtagagggctaatatttaagtgttcttgtgca 800963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 168 - 437
Target Start/End: Original strand, 10055812 - 10056083
Alignment:
Q  168 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-ttgcaggacg 266  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||  | || |||||| |||  |||||||       
T  10055812 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggt 10055910  T
Q  267 ccaaatcgtggcgcgatcttgggaaa-tcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaa 365  Q
     ||||||||| | |||| |||||||| ||||||||||||  |||||||||||| |||||||||||||| ||||||||||| | |||||||||  ||| ||    
T  10055911 gcaaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaa 10056010  T
Q  366 atcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    |||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  10056011 atcgtgacacgattgggcaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 10056083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 168 - 437
Target Start/End: Original strand, 10066922 - 10067193
Alignment:
Q  168 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-ttgcaggacg 266  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||  | || |||||| |||  |||||||       
T  10066922 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggt 10067020  T
Q  267 ccaaatcgtggcgcgatcttgggaaa-tcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaa 365  Q
     ||||||||| | |||| |||||||| ||||||||||||  |||||||||||| |||||||||||||| ||||||||||| | |||||||||  ||| ||    
T  10067021 gcaaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaa 10067120  T
Q  366 atcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    |||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  10067121 atcgtgacacgattgggcaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 10067193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 160 - 437
Target Start/End: Original strand, 3617034 - 3617311
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gttt 258  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  | || ||||||||| | ||    
T  3617034 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc-ggatgccgtgagctagggtt 3617131  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    |||||    ||||||||| | |||| | || |||||||||||||||   ||||||||||| |||||||||||||| || | |||||| | |||||||||     
T  3617132 gcaggggtgcaaatcgtgtcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataacggctggtcgttccttgggacg 3617231  T
Q  359 tacgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
     ||| |||||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  3617232 gacgcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 3617311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 160 - 437
Target Start/End: Original strand, 10210978 - 10211256
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-tt 258  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||| | | || |||||| |||  ||    
T  10210978 tgttgagatt-gtctttaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgattt-aggatgccgtgagttagggtt 10211075  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaa-tcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggac 357  Q
    |||||    ||||||||||| |||| |||||||| || |||||||||  |||||||||||| |||||||||||||| ||||||||||| | |||||||||    
T  10211076 gcaggggtgcaaatcgtggcacgattttgggaaaatcatgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 10211175  T
Q  358 atacgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
      ||| |||||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  10211176 ggacgcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 10211256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 466 - 632
Target Start/End: Original strand, 27986216 - 27986379
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    |||||||||||||||||||||||||||||||||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||| ||||||||||    
T  27986216 agagagagaaacttggattacaaaggagggaactttagggttgagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaacaccttgggt 27986313  T
Q  566 agtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    ||||| || |||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||    
T  27986314 agtga-gatttcaccattggaaggatcaaaagcttccttttgtgtcttctcttttagggttgatatt 27986379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 160 - 437
Target Start/End: Complemental strand, 7782712 - 7782454
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||  | ||  ||||||| |||||    
T  7782712 tgttgagatttggcttcaaatttgtggtctagaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgcggtgagctggtttg 7782613  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||                     |||||||||||   |||||||||| |||||| ||| ||| ||||||||||| | |||||||||      
T  7782612 cagggtgccaaatc---------------------gtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtgccttgggacga 7782534  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    |||||  |||||||||||||||||||||||||||||||||||  || | ||| | |||||||||||||||||||||||||    
T  7782533 acgtaccaatcgtgacacgatctggaaatcgtgacacgattttatcagtggagggctagtatttaagtgttcttgtgcag 7782454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 160 - 378
Target Start/End: Original strand, 10208778 - 10208996
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-tt 258  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||| |||||||  | || |||||| |||  ||    
T  10208778 tgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcatgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggtt 10208875  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaa-tcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggac 357  Q
    |||||    ||||||||||| |||| |||||||| ||||||||||||  |||||||||||| |||| ||||||||| ||||||||||| | |||||||||    
T  10208876 gcaggggtgcaaatcgtggcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaaatatccttgataaggactggtcgttccttgggac 10208975  T
Q  358 atacgtaaatcgtgacacgat 378  Q
      ||| |||||||||||||||    
T  10208976 ggacgcaaatcgtgacacgat 10208996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 466 - 629
Target Start/End: Original strand, 27974712 - 27974871
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||||||| ||   ||||||||||| ||||||||||    
T  27974712 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggtcgg--gaaacattgtaaacaccttgggt 27974809  T
Q  566 agtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat 629  Q
    ||||| || |||||||||||||||||| |||||||||| |||||||||||| ||||||||||||    
T  27974810 agtga-gatttcaccattggaaggatcaaaagcttccttttgtgtcttctc-tttagggttcat 27974871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 158 - 435
Target Start/End: Original strand, 2672416 - 2672695
Alignment:
Q  158 attgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gt 256  Q
    |||||||  ||||| ||||||||||||||||||||||||||| | ||||||| ||||||||||  |||||||||||||   | | || || |||| | ||    
T  2672416 attgttggaatttggcttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacgatcgga-gatgccgggagccaagt 2672514  T
Q  257 ttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttggga 356  Q
    |||| ||| || |||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||  |||| ||||    
T  2672515 ttgctggaagcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacctgggga 2672613  T
Q  357 catacgtaaatcgtgacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
    |    | | |||||||||||||||  |||||||||| ||||||||| || | | | ||||||||||| ||||||||||||||    
T  2672614 ccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgc 2672695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 159 - 599
Target Start/End: Complemental strand, 37726300 - 37725871
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagttt 258  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||  |||||||||||||||   | || |||||||| ||||    
T  37726300 ttgttgagatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgaatttgatatcgtgacacgattttgtgatgccgtgagctggttt 37726201  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    |||||  | ||||||||| | |||| ||| | |||||||||||||||   ||||||| |  |||||| | |  || ||||  ||||| ||| ||||| |     
T  37726200 gcagggtgtcaaatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgttggttaagttttcaggataagg-ttggtcgtacattgggtcg 37726102  T
Q  359 tacgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttg 456  Q
    ||||||  |||||||||||||| |||||| |||| ||||||||  || |  | | |||  ||| |||||||||||||||||       | || |||||||    
T  37726101 tacgtatcaatcgtgacacgatttggaaaacgtggcacgattttatcagctgcaaactgctatataagtgttcttgtgcagattttgga-agtgagcttg 37726003  T
Q  457 gaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatc 556  Q
             ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||||||| ||   ||||||| ||| |    
T  37726002 --------aagagagagaaacttggattacaaaggaggaaactttagggttgagtgtctttgtagtgaggatctcttgggtggg--gaaacattataaac 37725913  T
Q  557 accttgggtagtgaggagttcaccattggaaggatctaaagct 599  Q
    ||||||| |||||| || |||||||||| ||||||| ||||||    
T  37725912 accttggatagtga-gatttcaccattgaaaggatcaaaagct 37725871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 167 - 435
Target Start/End: Original strand, 2676581 - 2676851
Alignment:
Q  167 atttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gtttgcaggac 265  Q
    ||||| ||||||||||||||||||||||||||| | ||||||| ||||||||||  |||||||||||||   | | ||||| |||| | |||||| |||     
T  2676581 atttggcttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacgatcgga-gatgtcgggagccaagtttgctggaa 2676679  T
Q  266 gccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaa 365  Q
    || |||||||| | ||||||||||||||||||||||||||||||||||||||  ||||| |||  ||| |||||||||||  |||| |||||    | |     
T  2676680 gcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagaatctctgataaggactggtc-aacctggggaccgttgcag 2676778  T
Q  366 atcgtgacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
    |||||||||||||||  |||||||||| ||||||||| || | | | ||||||||||| ||||||||||||||    
T  2676779 atcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgc 2676851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 466 - 618
Target Start/End: Original strand, 39032315 - 39032463
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||| ||||||||||    
T  39032315 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgag-atctcttgggttgg--taaacattgtaaacaccttgggt 39032411  T
Q  566 agtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctctt 618  Q
    ||||| || |||||||||||||||||| |||||||||| ||||||||||||||    
T  39032412 agtga-gatttcaccattggaaggatcaaaagcttccttttgtgtcttctctt 39032463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 470 - 618
Target Start/End: Complemental strand, 16264671 - 16264526
Alignment:
Q  470 agagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtg 569  Q
    ||||||||||||||||||||||||| |||   |||||||||||||||||||  |||  |||||||||||||   ||||||||||| ||||||||||||||    
T  16264671 agagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtaatgaggatctcttgggttgg--gaaacattgtaaacaccttgggtagtg 16264574  T
Q  570 aggagttcaccattggaaggatctaaagcttcctcttgtgtcttctctt 618  Q
    | || |||||||||||||||||| |||||||||| ||||||||||||||    
T  16264573 a-gatttcaccattggaaggatcaaaagcttccttttgtgtcttctctt 16264526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 466 - 618
Target Start/End: Complemental strand, 21711548 - 21711399
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||| ||||||| ||    
T  21711548 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaacaccttgagt 21711451  T
Q  566 agtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctctt 618  Q
    ||||| || |||||||||||||||||| |||||||||| |||||| |||||||    
T  21711450 agtga-gatttcaccattggaaggatcaaaagcttccttttgtgttttctctt 21711399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 160 - 434
Target Start/End: Original strand, 37408036 - 37408310
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| ||||||||||||||| ||||||||||  ||||||||||||||||| |||||||||||||||||||    ||| |||||||| |||||    
T  37408036 tgttgagatttggcttcaaatttgtggtttggaagaacaaagaaatcgtgacacgattgtggcatcgtgacacgattttgtagtgccgtgagctggtttg 37408135  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  | ||||||||||| |||| |  | ||||||||||||||||   ||||||| |  |||||| | |  || ||||  ||||| ||||||||| | |    
T  37408136 cagggtgtcaaatcgtggcacgat-tgtgtaaatcgtgacacgattttcaaacttgttggttaagttttcaggataagg-ttggtcgtaccttgggtcgt 37408233  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtg 434  Q
    |||||  ||||||| |||||| |||||||||| ||| |||||  ||||  ||||||| |||| ||||||||||||||    
T  37408234 acgtatcaatcgtggcacgatttggaaatcgtaacaagattttatctgctgaagactggtatataagtgttcttgtg 37408310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 223 - 437
Target Start/End: Original strand, 6718331 - 6718545
Alignment:
Q  223 atcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcatta 322  Q
    ||||||||||||||||  |||| |||||||||| |||||||  || |||||||| | ||||  |||||||||||||||||||   ||||||||||| |||    
T  6718331 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgtta 6718430  T
Q  323 agtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtgacacgatctg-gaaatcgtgacacgatttcctctgaggaagactagtattt 421  Q
    ||||||||||| ||||||||||| |  ||||||   ||||   ||||||||||||| ||  ||||||||||||||||||  | |||||||||||||| |     
T  6718431 agtatccttgataaggactggtcgtttcttgggtggtacgcggatcgtgacacgatttgaaaaatcgtgacacgatttcaacagaggaagactagta-ta 6718529  T
Q  422 aagtgttcttgtgcag 437  Q
    ||||||||||||||||    
T  6718530 aagtgttcttgtgcag 6718545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 466 - 618
Target Start/End: Original strand, 40592542 - 40592692
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||| ||||||||||    
T  40592542 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaacaccttgggt 40592639  T
Q  566 agtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||| || ||||||||||||||||||  |||||||||| |||||| |||||||    
T  40592640 agtga-gatttcaccattggaaggatcaaaaagcttccttttgtgttttctctt 40592692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 466 - 618
Target Start/End: Original strand, 8370249 - 8370398
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||| || |||||||    
T  8370249 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaacatcttgggt 8370346  T
Q  566 agtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctctt 618  Q
    ||||| || |||||||||||||||||| |||| ||||| |||||| |||||||    
T  8370347 agtga-gatttcaccattggaaggatcaaaagtttccttttgtgttttctctt 8370398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 470 - 618
Target Start/End: Complemental strand, 36029415 - 36029270
Alignment:
Q  470 agagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtg 569  Q
    ||||||||||||||||||||||||| ||    |||||||||||||||||||| |||  ||||||||||||| |||  |||||||| ||||||||||||||    
T  36029415 agagaaacttggattacaaaggaggtaaatttagggttgagtgtctttgtagtgaggatctcttgggttgggaaa--cattgtaaacaccttgggtagtg 36029318  T
Q  570 aggagttcaccattggaaggatctaaagcttcctcttgtgtcttctctt 618  Q
    || | |||||||||||||||||| |||||||||| |||||| |||||||    
T  36029317 ag-atttcaccattggaaggatcaaaagcttccttttgtgttttctctt 36029270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 449 - 565
Target Start/End: Original strand, 22172985 - 22173100
Alignment:
Q  449 agagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaaca 548  Q
    |||||||| | ||||||||| |||||| |||||||  ||||| |||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||    
T  22172985 agagcttgtatgagcttagaaagagaa-cttggatagcaaagtagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaaca 22173083  T
Q  549 ttgtaatcaccttgggt 565  Q
    |||||||||||||||||    
T  22173084 ttgtaatcaccttgggt 22173100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 173 - 435
Target Start/End: Complemental strand, 8512815 - 8512551
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtc-gtgagcta-gtttgcaggacgccaa 270  Q
    ||||||||| ||||| ||| ||||||| | ||||||| ||||||||||   ||||||||||||  || || | | |||||||| |||||| ||| || ||    
T  8512815 cttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgat--cagggaggcagtgagctaagtttgctggaagcaaa 8512718  T
Q  271 atcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgt 370  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||  || | |||||    | | |||||    
T  8512717 atcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacttggggaccgttgcagatcgt 8512619  T
Q  371 gacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
    ||||||||||  |||||||||| |||||||||||| |   | ||||||||||| ||||||||||||||    
T  8512618 gacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgc 8512551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 466 - 616
Target Start/End: Original strand, 47923664 - 47923812
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||| |||   ||| |||||||||||||||| |||  |||||||||||||   ||||||||||| ||||||||||    
T  47923664 agagagagaaacttggattacaaaggaggtaactttaggattgagtgtctttgtagtgagaatctcttgggttgg--gaaacattgtaaacaccttgggt 47923761  T
Q  566 agtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctc 616  Q
    ||||| || ||||||||||||||||||  |||||||||| |||||| |||||    
T  47923762 agtga-gatttcaccattggaaggatcaaaaagcttccttttgtgttttctc 47923812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 223 - 437
Target Start/End: Original strand, 45282628 - 45282842
Alignment:
Q  223 atcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcatta 322  Q
    ||||||||||||||||  |||| |||||||||| |||||||  || || ||||| | |||| | || |||||||||||||||   ||||||||||| |||    
T  45282628 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 45282727  T
Q  323 agtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtattt 421  Q
    ||||||||||| ||||||||||| |  ||||||   |||| | |||||||||||||  || ||||||||||||||||||  | ||||||| |||||| |     
T  45282728 agtatccttgataaggactggtcgtttcttgggtggtacgcagatcgtgacacgattgggaaaatcgtgacacgatttcaacagaggaaggctagta-ta 45282826  T
Q  422 aagtgttcttgtgcag 437  Q
    ||||||||||||||||    
T  45282827 aagtgttcttgtgcag 45282842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 466 - 618
Target Start/End: Original strand, 1736064 - 1736214
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  ||| |||||||||   ||||||||||| ||||||||||    
T  1736064 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctattgggttgg--gaaacattgtaaacaccttgggt 1736161  T
Q  566 agtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||| || ||||||||||||||||||  |||||||| | |||||| |||||||    
T  1736162 agtga-gatttcaccattggaaggatcaaaaagcttctttttgtgttttctctt 1736214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 464 - 632
Target Start/End: Original strand, 6794473 - 6794636
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    ||||||||||||||||||||||||||||||| |||   ||||||||||||| |||||| |||  ||||||| |||||   ||||||||||| ||||||||    
T  6794473 ttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtcattgtagtgaggttctcttgagttgg--gaaacattgtaaacaccttgg 6794570  T
Q  564 gtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    ||||||| || ||||||||||||| || | |||||||||| |||| | |||||  ||||||||||||||    
T  6794571 gtagtga-gatttcaccattggaatgaacaaaagcttccttttgtattttctc--ttagggttcatatt 6794636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 173 - 435
Target Start/End: Complemental strand, 8517695 - 8517431
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtc-gtgagcta-gtttgcaggacgccaa 270  Q
    ||||||||| ||||| | | ||||||| | ||||||| ||||||||||   ||||||||||||  || || | | |||||||| |||||| ||| || ||    
T  8517695 cttcaaattagtggtttaggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgat--cagggaggcagtgagctaagtttgctggaagcaaa 8517598  T
Q  271 atcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgt 370  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||  || | |||||    | | |||||    
T  8517597 atcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacttggggaccgttgcagatcgt 8517499  T
Q  371 gacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
    ||||||||||  |||||||||| |||||||||||| |   | ||||||||||| ||||||||||||||    
T  8517498 gacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgc 8517431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 254 - 435
Target Start/End: Complemental strand, 24968611 - 24968428
Alignment:
Q  254 agtttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttg 353  Q
    ||||||| ||| || |||||||||| ||||||||||||||||||||||||||||||||||||||  |||||| ||  ||| |||||||||||  |||| |    
T  24968611 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtc-aacctgg 24968513  T
Q  354 ggacatacgtaaatcgtgacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
    ||||    | |||||||| ||||||||  |||||||||| ||||||||| || | | ||||||||||||| ||||||||||||||    
T  24968512 ggaccgttgcaaatcgtgccacgatctagggaaatcgtggcacgatttcttcagggcaagactagtatttaaagtgttcttgtgc 24968428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 173 - 435
Target Start/End: Complemental strand, 32476059 - 32475795
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtc-gtgagcta-gtttgcaggacgccaa 270  Q
    ||||||||||||||| ||| ||||||| | ||||||| |||||||| | ||||||||||||||  || || | | |||||| | |||  | | | || ||    
T  32476059 cttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgat--cagggaggcagtgagccaagttctctgaaagcaaa 32475962  T
Q  271 atcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgt 370  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| ||||||||||| | | | |||||    | | |||||    
T  32475961 atcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcat-cttggggaccgttgcatatcgt 32475863  T
Q  371 gacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
    ||||||||||  |||||||||| ||||||||| |||| | | ||||||||||| ||||||||||||||    
T  32475862 gacacgatctagggaaatcgtggcacgatttcttctgggcaggactagtatttaaagtgttcttgtgc 32475795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 469 - 618
Target Start/End: Complemental strand, 35925803 - 35925655
Alignment:
Q  469 gagagaaacttggattacaaaggag--ggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggta 566  Q
    |||||||||||||||||||||||||  | |||   |||||||| ||||||||||| |||  ||| ||||||||| |||  |||||||| |||||||||||    
T  35925803 gagagaaacttggattacaaaggagatgtaactttagggttgaatgtctttgtagtgaggatcttttgggttgggaaa--cattgtaaacaccttgggta 35925706  T
Q  567 gtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctctt 618  Q
    ||||| | |||||||||||||||||| |||||||||| |||||| |||||||    
T  35925705 gtgag-atttcaccattggaaggatcaaaagcttccttttgtgttttctctt 35925655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 464 - 618
Target Start/End: Original strand, 3323449 - 3323601
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    ||||||||| |||||| |||||||||||||| |||   |||||||||||||||| ||| |||  |||||||||||||   ||||||||||| ||||||||    
T  3323449 ttagagagacaaacttcgattacaaaggaggtaactttagggttgagtgtctttatagtgaggttctcttgggttgg--gaaacattgtaaacaccttgg 3323546  T
Q  564 gtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||||| || ||||||||||||| ||||  |||||||||| |||||| |||||||    
T  3323547 gtagtga-gatttcaccattggaatgatcaaaaagcttccttttgtgttttctctt 3323601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 464 - 618
Target Start/End: Original strand, 3328115 - 3328267
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    |||||||||||||||||||||| |||||||  |||   |||||||| ||||||||||| |||  |||||||||||||  |||||||||||| ||||||||    
T  3328115 ttagagagagaaacttggattagaaaggagataactttagggttgaatgtctttgtagtgagcttctcttgggttgg--aaaacattgtaaacaccttgg 3328212  T
Q  564 gtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||||| || |||| |||||||||||||  ||| |||||| |||||| |||||||    
T  3328213 gtagtga-gatttcagcattggaaggatcaaaaaacttccttttgtgttttctctt 3328267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 466 - 615
Target Start/End: Original strand, 24694926 - 24695073
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||| ||||||||||||||||| |||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||| ||||||||||    
T  24694926 agagagagaaatttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaacaccttgggt 24695023  T
Q  566 agtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttct 615  Q
     |||| || ||||||||||||| ||||  |||||||||| |||||| ||||    
T  24695024 ggtga-gatttcaccattggaatgatcaaaaagcttccttttgtgttttct 24695073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 173 - 435
Target Start/End: Complemental strand, 32480917 - 32480653
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtc-gtgagcta-gtttgcaggacgccaa 270  Q
    ||||||||||||||| ||| ||||||| | ||||||| |||||||| | ||||||||||||||  || || | | |||||| | |||  | | | || ||    
T  32480917 cttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgat--cagggaggcagtgagccaagttctctgaaagcaaa 32480820  T
Q  271 atcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgt 370  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| ||||||||||| | | | |||||    | | |||||    
T  32480819 atcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcat-cttggggaccgttgcatatcgt 32480721  T
Q  371 gacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
    ||||||||||  |||||||||| ||||||||| |||  | | ||||||||||| ||||||||||||||    
T  32480720 gacacgatctagggaaatcgtggcacgatttcttctaggcaggactagtatttaaagtgttcttgtgc 32480653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 468 - 618
Target Start/End: Complemental strand, 48438539 - 48438392
Alignment:
Q  468 agagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtag 567  Q
    ||||||||||||||||||||||||||| |||   ||||||||||||||||||||  ||  |||||||| | ||   ||||||||||| ||||||||||||    
T  48438539 agagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtaaggatctcttggttggg---aaacattgtaaacaccttgggtag 48438443  T
Q  568 tgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||| || ||||||||||||| ||||  |||||||||| |||||| |||||||    
T  48438442 tga-gatttcaccattggaatgatcaaaaagcttccttttgtgttttctctt 48438392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 464 - 587
Target Start/End: Complemental strand, 26299316 - 26299196
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    |||||||||||||||||||||| |||||||| |||   |||||||| ||||||||||| |||  |||||||||||||   ||||||||||| ||||||||    
T  26299316 ttagagagagaaacttggattataaaggaggtaactttagggttgaatgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaacaccttgg 26299219  T
Q  564 gtagtgaggagttcaccattggaa 587  Q
    ||||||| || |||||||||||||    
T  26299218 gtagtga-gatttcaccattggaa 26299196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 45282583 - 45282642
Alignment:
Q  158 attgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  45282583 attgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 45282642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 6718288 - 6718345
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6718288 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 6718345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 459 - 618
Target Start/End: Original strand, 3715752 - 3715912
Alignment:
Q  459 agagcttagagagagaaacttg-gattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttggaaaaaacattgtaat 555  Q
    ||||||| |||||||||||||| || ||||||||||| |||   |||||||| ||||||||||| |||  |||||||  |||||| |||  ||||||||     
T  3715752 agagctttgagagagaaacttgagaatacaaaggaggtaactttagggttgaatgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaa 3715849  T
Q  556 caccttgggtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||||||||||||| || ||||||||||||||||||  ||||||| || |||||| |||||||    
T  3715850 caccttgggtagtga-gatttcaccattggaaggatcaaaaagctttcttttgtgttttctctt 3715912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 464 - 618
Target Start/End: Complemental strand, 8126958 - 8126806
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    ||||||||||||||||||||||||||| | | |||   |  ||||||||||||||||| |||  | ||||||||||| |||  |||||||| ||||||||    
T  8126958 ttagagagagaaacttggattacaaagaaagtaactttacagttgagtgtctttgtagtgaggttttcttgggttgggaaa--cattgtaaacaccttgg 8126861  T
Q  564 gtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||||| || |||| |||||||||||||  |||||||| | |||||| |||||||    
T  8126860 gtagtga-gatttcatcattggaaggatcaaaaagcttctttttgtgttttctctt 8126806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 469 - 592
Target Start/End: Original strand, 25929159 - 25929278
Alignment:
Q  469 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagt 568  Q
    ||||||||||| |||||||||||||| |||   |||||||||||||||||||| |||  ||||||| |||||  |||||||||||| || ||||||||||    
T  25929159 gagagaaacttagattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagttgg--aaaacattgtaaaca-cttgggtagt 25929255  T
Q  569 gaggagttcaccattggaaggatc 592  Q
    || || |||||||| |||||||||    
T  25929256 ga-gatttcaccatcggaaggatc 25929278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 464 - 610
Target Start/End: Complemental strand, 37466623 - 37466479
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    ||||||||||||||||||||||||||||||| |||   || | ||||||||||||||| |||  |||||| ||||||   ||||||||||| ||| ||||    
T  37466623 ttagagagagaaacttggattacaaaggaggtaactttagagctgagtgtctttgtagtgaggttctcttaggttgg--gaaacattgtaaacactttgg 37466526  T
Q  564 gtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgt 610  Q
    || |||| || ||||||||||||| ||||  |||||||||| ||||||    
T  37466525 gttgtga-gatttcaccattggaaagatcgaaaagcttccttttgtgt 37466479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 463 - 571
Target Start/End: Original strand, 4386733 - 4386840
Alignment:
Q  463 cttagagagagaaacttggat-tacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcacctt 561  Q
    |||||||||||||||||| |  ||||||||||| |||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||||||||||    
T  4386733 cttagagagagaaacttgaaaatacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgg--gaaacattgtaatcacctt 4386830  T
Q  562 gggtagtgag 571  Q
    | ||||||||    
T  4386831 gagtagtgag 4386840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 462 - 618
Target Start/End: Complemental strand, 25796113 - 25795956
Alignment:
Q  462 gcttagagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctctt--gggttggaaaaaacattgtaatcac 558  Q
    |||| ||||||||||||||| | ||||||||||| |||   |||||||||||||||||||| |||  ||||||  |||||||   ||||| ||||| |||    
T  25796113 gctttgagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggctctcttgagggttgg--gaaacaatgtaaacac 25796016  T
Q  559 cttgggtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    |||||||||||| || ||||||||||||||||||  |||||||||| || ||| |||||||    
T  25796015 cttgggtagtga-gatttcaccattggaaggatcaaaaagcttccttttatgttttctctt 25795956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 464 - 592
Target Start/End: Original strand, 1417249 - 1417374
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    ||||||||| ||||||| ||||||||||||| |||   |||||||||||||||||||| |||  | |||||||||||   ||||||||||| ||| || |    
T  1417249 ttagagagaaaaacttgaattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttatcttgggttgg--gaaacattgtaaacactttag 1417346  T
Q  564 gtagtgaggagttcaccattggaaggatc 592  Q
    ||||||| || |||||||||| |||||||    
T  1417347 gtagtga-gatttcaccattgaaaggatc 1417374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 27974433 - 27974493
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 220  Q
    |||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  27974433 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttg 27974493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 466 - 562
Target Start/End: Complemental strand, 23410624 - 23410529
Alignment:
Q  466 agagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttg 562  Q
    |||||||||||||||| ||| |||||||| ||||   |||||||||||||||||||| |||  |||||||||||||  |||||||||||| |||||||    
T  23410624 agagagagaaacttgggattgcaaaggagagaactttagggttgagtgtctttgtagtgaggttctcttgggttgg--aaaacattgtaaacaccttg 23410529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 466 - 571
Target Start/End: Complemental strand, 27027032 - 27026929
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||| ||||||||||||||||||||| |||   |||||||||||||||||||  |||  |||||||| | ||   ||||||||||| ||||||||||    
T  27027032 agagagaaaaacttggattacaaaggaggtaactttagggttgagtgtctttgtactgaggatctcttggatagg--gaaacattgtaaacaccttgggt 27026935  T
Q  566 agtgag 571  Q
    ||||||    
T  27026934 agtgag 27026929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 470 - 618
Target Start/End: Complemental strand, 40844977 - 40844826
Alignment:
Q  470 agagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtg 569  Q
    |||||||||| |||||||||||||| |||   |||||||||||||||||||| |||  ||| ||||||||  | ||||||||||| ||||||| ||| ||    
T  40844977 agagaaacttagattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctattgggttg--agaaacattgtaaacaccttgagtaatg 40844880  T
Q  570 ag----gagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||    ||  | |||||||||||||||  |||||||||| |||||| |||||||    
T  40844879 agatttgacctgaccattggaaggatcaaaaagcttccttttgtgttttctctt 40844826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 27985957 - 27986017
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 220  Q
    ||||||||||||  |||||||||||||| ||||| ||||| ||||||||||||||||||||    
T  27985957 tgttgagatttgatttcaaatttgtggtttggaataacagagaaatcgtgacacgattttg 27986017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 36029704 - 36029640
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgattt 237  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||  || |||| ||||||||    
T  36029704 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttatcaacgtgtcacgattt 36029640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 40734084 - 40734132
Alignment:
Q  170 tgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  40734084 tgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 40734132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 40845279 - 40845220
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatttt 219  Q
    ||||||||||||||||||||||| || | ||| ||||||| |||||||||||||||||||    
T  40845279 tgttgagatttgtcttcaaatttatgttttgggagaacagagaaatcgtgacacgatttt 40845220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 466 - 571
Target Start/End: Complemental strand, 27038377 - 27038274
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||| ||||||||||||||||||||  |||   ||||||||||| |||||||| |||  |||||||||| ||   ||||||||||| ||||||||||    
T  27038377 agagagaaaaacttggattacaaaggagataactttagggttgagtgcctttgtagtgaggatctcttgggtagg--gaaacattgtaaacaccttgggt 27038280  T
Q  566 agtgag 571  Q
     |||||    
T  27038279 ggtgag 27038274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 16264941 - 16264896
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  16264941 cttcaaatttgtggtttggaagaacagcgaaatcgtgacacgattt 16264896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 21711813 - 21711768
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  21711813 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 21711768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 27027318 - 27027273
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  27027318 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 27027273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 30709271 - 30709316
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  30709271 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 30709316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 618
Target Start/End: Complemental strand, 47649862 - 47649746
Alignment:
Q  502 agggttgagtgtctttgtagagagtgtctcttg--ggttggaaaaaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatc-taaagc 598  Q
    |||||||||||||||||||| |||  |||||||  |||||| |||  |||||||| ||||||||||||| | || ||||||||| ||||||||  |||||    
T  47649862 agggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtta-gatttcaccatttgaaggatcaaaaagc 47649766  T
Q  599 ttcctcttgtgtcttctctt 618  Q
    ||||| |||||| |||||||    
T  47649765 ttccttttgtgttttctctt 47649746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 8738554 - 8738593
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgaca 212  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  8738554 cttcaaatttgtggtctggaagaacagagaaatcgtgaca 8738593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 9090792 - 9090831
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgaca 212  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  9090792 cttcaaatttgtggtctggaagaacagagaaatcgtgaca 9090831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 544 - 618
Target Start/End: Original strand, 18552721 - 18552795
Alignment:
Q  544 aaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||||||||| ||||||||||||||| || ||||||||||||||||||  ||| |||||| |||||| |||||||    
T  18552721 aaacattgtaaacaccttgggtagtga-gatttcaccattggaaggatcaaaaaacttccttttgtgttttctctt 18552795  T

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Target: chr3; HSP #90
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 27038667 - 27038588
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttc 238  Q
    ||||||| | ||| |||||| |||||||| ||||| ||||| ||||||||||||||||||   || ||||||||||||||    
T  27038667 ttgttgaaaattggcttcaagtttgtggtttggaaaaacagagaaatcgtgacacgatttcatcaacgtgacacgatttc 27038588  T

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Target: chr3; HSP #91
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 39032017 - 39032075
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    |||||| | ||| |||||||||||| || ||||||||||| ||||||||||||||||||    
T  39032017 tgttgaaaattggcttcaaatttgttgtttggaagaacagagaaatcgtgacacgattt 39032075  T

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Target: chr3; HSP #92
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 466 - 565
Target Start/End: Complemental strand, 23392204 - 23392106
Alignment:
Q  466 agagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttggg 564  Q
    |||||||||||||||| | | |||||||| |||    |||||||||||||||||||| |||  |||||||||||||   ||||||||||| |||||||||    
T  23392204 agagagagaaacttgggactgcaaaggagagaaatttagggttgagtgtctttgtagtgaggttctcttgggttgg--gaaacattgtaaacaccttggg 23392107  T

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Target: chr3; HSP #93
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 40735015 - 40735063
Alignment:
Q  170 tgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    |||||||||||||||||| |||| ||||||  |||||||||||||||||    
T  40735015 tgtcttcaaatttgtggtttggatgaacagataaatcgtgacacgattt 40735063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 521 - 564
Target Start/End: Complemental strand, 18656657 - 18656614
Alignment:
Q  521 gagagtgtctcttgggttggaaaaaacattgtaatcaccttggg 564  Q
    |||||||| |||| |||||| |||||||||||||||||||||||    
T  18656657 gagagtgtttcttaggttgggaaaaacattgtaatcaccttggg 18656614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 1730921 - 1730959
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgac 211  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  1730921 cttcaaatttgtggtttggaagaacagagaaatcgtgac 1730959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 592
Target Start/End: Complemental strand, 21353898 - 21353765
Alignment:
Q  462 gcttagagagagaaactt-ggattacaaaggagggaaccaaagggtt--gagtgtctttgtagagagtgtctcttg--ggttggaaaaaacattgtaatc 556  Q
    |||||||||||||||| | ||| ||||||||||| |||   ||||||  |||||||||||||| |||  |||||||  |||||| |||  ||| |||| |    
T  21353898 gcttagagagagaaacctaggaatacaaaggaggtaactttagggttttgagtgtctttgtagtgaggttctcttgagggttgggaaa--catcgtaaac 21353801  T
Q  557 accttgggtagtgaggagttcaccattggaaggatc 592  Q
    || |||||||||||| |  |||||||||||||||||    
T  21353800 actttgggtagtgagaatgtcaccattggaaggatc 21353765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 435
Target Start/End: Original strand, 22172884 - 22172957
Alignment:
Q  364 aaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgc 435  Q
    |||||||| |||||| ||| |||||||| ||||||||| || ||||||||||||||| ||  ||||||||||||    
T  22172884 aaatcgtggcacgatttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 22172957  T

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Target: chr3; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 35926101 - 35926057
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  35926101 cttcaaatttg-ggtttggaagaacagagaaatcgtgacacgattt 35926057  T

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Target: chr3; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 40592257 - 40592302
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||| ||||||||| | |||||||||||| |||||    
T  40592257 cttcaaatttgtggtttggaagaacggagaaatcgtgacatgattt 40592302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 48438823 - 48438782
Alignment:
Q  177 aaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||| || |||||||| ||||||||||||||||||    
T  48438823 aaatttgtggtttgtaagaacagagaaatcgtgacacgattt 48438782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 405 - 437
Target Start/End: Original strand, 10209004 - 10209036
Alignment:
Q  405 gaggaagactagtatttaagtgttcttgtgcag 437  Q
    |||||||||||||| ||||||||||||||||||    
T  10209004 gaggaagactagtacttaagtgttcttgtgcag 10209036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 328; Significance: 0; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 173 - 632
Target Start/End: Complemental strand, 24742565 - 24742106
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  24742565 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaat 24742466  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| || ||  ||| ||||||||     
T  24742465 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcatacctgggaacggacgcaaatcgtgc 24742366  T
Q  373 cacgatctggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgcagnnnnnnnagagagagcttggaagagcttagagag 471  Q
    |||||||||||||||||||||||||||| || ||||||||||||||| ||  ||||||||||||||       || ||||||||||||||||||||||||    
T  24742365 cacgatctggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgcag-atttgtag-gagagcttggaagagcttagagag 24742268  T
Q  472 agaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgag 571  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24742267 agaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 24742168  T
Q  572 gagttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    |||||||  | |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24742167 gagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 24742106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 223 - 630
Target Start/End: Complemental strand, 29761196 - 29760810
Alignment:
Q  223 atcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcatta 322  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  29761196 atcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtta 29761097  T
Q  323 agtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtattta 422  Q
    ||||||||||| ||||||||||| ||||||||    ||||        ||| |       |||||||| ||||||||| || ||||||||||||||| ||    
T  29761096 agtatccttgataaggactggtcataccttgg----tacg--------gacgc-------aaatcgtggcacgatttcttcagaggaagactagtatata 29761016  T
Q  423 a-gtgttcttgtgcagnnnnnnnagagagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtag 521  Q
      ||||||||||||||        | |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29761015 ttgtgttcttgtgcagatttg---gggagagcttggaagaacttagagtgagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtag 29760919  T
Q  522 agagtgtctcttgggtt-ggaaaaaacattgtaatcaccttgggtagtgaggagttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttt 619  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||| ||||||||||  |    
T  29760918 agagtgtctcttgggttgggaaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctc--t 29760821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 160 - 632
Target Start/End: Original strand, 28467977 - 28468470
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||| |||||||||   | || |||||||| |||||    
T  28467977 tgttgagatttggcttcaaatttgtggtatggaagaacagagaaatcgtgacacgaatttggcatcgtaacacgattttgtgatgccgtgagctggtttg 28468076  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||||| | ||||||||| ||||||||||||||||   |||||||||| |||||| ||  ||| ||||||||||| ||||||| ||| |    
T  28468077 cagggtgccaaatcgtgacacgatcttggaaaatcgtgacacgattttcaaacttgctcgttaagtttctatgataaggactggtcgtaccttgtgacgt 28468176  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacg------------------atttcctctgaggaagactagta---tttaagtgttcttgtgca 436  Q
    |||||  |||||||||||||  ||||||||||||||||                  ||||  || | ||||||||||||   ||||||||||||||||||    
T  28468177 acgtacaaatcgtgacacgacttggaaatcgtgacacgattttaaatcgtgacacgattttatcagtggaagactagtagtatttaagtgttcttgtgca 28468276  T
Q  437 gnnnnnnnagagagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttggg 536  Q
    |       || |||||||||||||||||||||||||||||||||||||||||||||||||||   |||||| ||||||||||||| |||  |||||||||    
T  28468277 gattttggag-gagagcttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttaagtgtctttgtagtgaggatctcttggg 28468375  T
Q  537 ttggaaaaaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    |||| ||||| ||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28468376 ttgggaaaaatattgtaaacaccttgggtagtga-gatttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 28468470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 173 - 565
Target Start/End: Complemental strand, 51521038 - 51520637
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  51521038 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgcaggacgccaaat 51520939  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||| ||| |||||||| || ||||||||| || ||| |||||||||    
T  51520938 cgtggcacgatcttgggaaatcatgacacgattcagaaacttgctcgttaagtatccctgataaggactgatc-taccttgggtcagacgcaaatcgtga 51520840  T
Q  373 cacgatct-ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgc---------agnnnnnnnagagagagcttggaaga 461  Q
    |||||| | |||||||||| ||| ||| | || ||||||| ||||||| ||  ||||||||||||         ||         |||||||||| | ||    
T  51520839 cacgatttgggaaatcgtggcacaattgcttcagaggaaggctagtatatattgtgttcttgtgcttttttacaagtaggacttaagagagcttgaatga 51520740  T
Q  462 gcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcacctt 561  Q
    |||||||||||| |||||||||   ||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  51520739 gcttagagagag-aacttggatagaaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacctt 51520641  T
Q  562 gggt 565  Q
    ||||    
T  51520640 gggt 51520637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 173 - 565
Target Start/End: Original strand, 9228698 - 9229099
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  | |||||||| ||||||||||||||||||    
T  9228698 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctcgtttgcaggacgccaaat 9228797  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||  ||| ||||||| ||| ||||||||| |    | | |||||||    
T  9228798 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccgttgcagatcgtga 9228896  T
Q  373 cacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgc--------agnnnnnnnagagagagcttggaaga 461  Q
    ||||||||  |||||||||| ||||||||| || ||||||||||||||| ||  ||||||||||||        ||         |||||||||| | ||    
T  9228897 cacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaagtgaatcttaagagagcttgtatga 9228996  T
Q  462 gcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcacctt 561  Q
    |||||||||||| |||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |  |||||||||||||||||||    
T  9228997 gcttagagagag-aacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttgggaaaacattgtaatcacctt 9229095  T
Q  562 gggt 565  Q
    ||||    
T  9229096 gggt 9229099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 173 - 565
Target Start/End: Original strand, 9223911 - 9224312
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||    
T  9223911 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaat 9224010  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||  ||| ||||||| ||| ||||||||| |    | | |||||||    
T  9224011 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccgttgcagatcgtga 9224109  T
Q  373 cacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgc--------agnnnnnnnagagagagcttggaaga 461  Q
    ||||||||  |||||||||| ||| ||||| || ||||||||||||||| ||  |||||||| |||        ||         |||||||||| | ||    
T  9224110 cacgatctagggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttcttctgcttttttgaagtgaatcttaagagagcttgtatga 9224209  T
Q  462 gcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcacctt 561  Q
    |||||||||||| |||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |  |||||||||||||||||||    
T  9224210 gcttagagagag-aacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttgggaaaacattgtaatcacctt 9224308  T
Q  562 gggt 565  Q
    ||||    
T  9224309 gggt 9224312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 173 - 435
Target Start/End: Original strand, 56141523 - 56141788
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgcc-aaa 271  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||| |||    
T  56141523 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttggaggggtcgtgagctagtttgcaggacgccaaaa 56141622  T
Q  272 tcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtg 371  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||| ||||||||| || | | ||||||||    
T  56141623 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcagatgcaaatcgtg 56141721  T
Q  372 acacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgc 435  Q
    |||||||||  |||||||||| ||||||||| || ||||||||||||||| ||  ||||||||||||    
T  56141722 acacgatcttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 56141788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 160 - 437
Target Start/End: Complemental strand, 13992879 - 13992600
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  | ||||||||||| |||||    
T  13992879 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgtcgtgagctggtttg 13992780  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||||| | |||| |||||||||||||||||||||   |||||||||| |||||| | | ||| ||||||||||| ||||||| ||| |    
T  13992779 cagggtgccaaatcgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagttttcatgataaggactggtcataccttgtgacgt 13992680  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    |||||  |||||||||||||||||||||||||||||||||||  || | |||||||||||||||||||||||||||||||    
T  13992679 acgtatcaatcgtgacacgatctggaaatcgtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcag 13992600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 160 - 437
Target Start/End: Complemental strand, 31495902 - 31495623
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  | || |||||||| |||||    
T  31495902 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 31495803  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||||| | ||||  ||||||||||||||||||||   |||||||||| |||||| ||| ||| ||||||||||| |  ||||||||      
T  31495802 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtttcttgggacga 31495703  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||| |  ||||||||||| | |||||||||||||||||||||  || | ||| | ||| |||||||||||||||||||||    
T  31495702 acgcaccaatcgtgacacaacctggaaatcgtgacacgattttatcagtggagggctaatatttaagtgttcttgtgcag 31495623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 168 - 437
Target Start/End: Original strand, 7122274 - 7122544
Alignment:
Q  168 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-ttgcaggacg 266  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||  | || ||||||||||  |||||||       
T  7122274 tttgtcttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcg-gatgccgtgagctagggttgcaggggt 7122372  T
Q  267 ccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaa 366  Q
     ||||||||||| ||||  ||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||| | |||||||||  ||| |||    
T  7122373 gcaaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaa 7122472  T
Q  367 tcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  7122473 tcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 7122544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 6 - 159
Target Start/End: Original strand, 44882044 - 44882193
Alignment:
Q  6 agaaaacaacctgcatcactcaagaacctaagtattcaaaggcaagggtcaaaagcttcggcgcaaatggagaaagcggacatcatccaagaggtgagct 105  Q
    ||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  44882044 agaaaacaacctgcatcact----aacctaagtattcaaaggcaagggtcaaaagcttcggcgcaaatggagaaagcggacgtcatccaagaggtgagct 44882139  T
Q  106 ttatgtgtattgaataaatgtgccacctcagtgaggagtattggtatcatttat 159  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  44882140 ttatgtgtattgaataaatgtgccacctcagtgaggagtagtggtatcatttat 44882193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 160 - 437
Target Start/End: Original strand, 8392982 - 8393258
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-tt 258  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  | || ||||||||||  ||    
T  8392982 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 8393079  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    |||||    ||||||||||| |||| | || ||||||||||||||| ||||||||||||| |||||||||| ||| |||||||||||||  ||||||       
T  8393080 gcaggggtgcaaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccgtgataaggactggtcttttcttgggtgg 8393179  T
Q  359 tacgtaaatcgtgacacgatct-ggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    |||| | ||||||||||||| | ||||||||||||||||||||  | ||||||| |||||| | ||||||||||||||||    
T  8393180 tacgcagatcgtgacacgatttgggaaatcgtgacacgatttcaacagaggaaggctagta-taaagtgttcttgtgcag 8393258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 173 - 419
Target Start/End: Complemental strand, 5733235 - 5732987
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtga-gctagtttgcaggacgccaaa 271  Q
    |||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||  |||| ||||| || ||||||||||||||||||    
T  5733235 cttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtgaagcaagtttgcaggacgccaaa 5733136  T
Q  272 tcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtg 371  Q
    ||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||  |||| |||||    | | ||||||    
T  5733135 tcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc-aacctggggaccgttgcagatcgtg 5733037  T
Q  372 acacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtat 419  Q
    |||||||||  |||||||||| ||||||||| || | ||| |||||||||    
T  5733036 acacgatctagggaaatcgtggcacgatttcttcaggggaggactagtat 5732987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 156 - 565
Target Start/End: Complemental strand, 3814609 - 3814202
Alignment:
Q  156 ttattgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctag 255  Q
    |||||||||| ||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    ||| ||| ||    
T  3814609 ttattgttgatattgg-cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtgaccgtaagcaag 3814511  T
Q  256 tttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttggg 355  Q
    |||||| |||||||||||||| | |||| |||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||  ||||  |     
T  3814510 tttgcaagacgccaaatcgtgtcacgat-ttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc-aacctgaga 3814413  T
Q  356 acatacgtaaatcgtgacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgcagnnnnnnnagagagag 452  Q
    ||    | | ||||||||| |||||  |||||||||||||||||||| || | ||||||||||||| ||  ||||||||||||         ||| | |     
T  3814412 accgttgcagatcgtgacaagatctagggaaatcgtgacacgatttcttcaggggaagactagtatatattgtgttcttgtgc-ttttttgaagaca-ac 3814315  T
Q  453 cttggaagagctt-agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattg 551  Q
    ||| | ||||||| ||||||| |||||||||   ||||||||||| || | ||| || |||||||||  |||||||| |||| |||||| ||||||||||    
T  3814314 cttaggagagcttaagagaga-aaacttggacatcaaaggagggatcctatggggtgtgtgtctttgatgagagtgtttcttaggttgggaaaaacattg 3814216  T
Q  552 taatcaccttgggt 565  Q
    ||||||||||||||    
T  3814215 taatcaccttgggt 3814202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 201 - 435
Target Start/End: Original strand, 18712295 - 18712531
Alignment:
Q  201 gaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgaca 300  Q
    |||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18712295 gaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgaca 18712394  T
Q  301 cgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtgacacgatct--ggaaatcgtgacacgatt 398  Q
    |||||||||||||||||| |||||||||  ||| ||||||| |||  |||||||| |    | | |||||||||| ||||  | |||||||| |||||||    
T  18712395 cgattcagaaacttgctcgttaagtatcactgataaggacttgtc-aaccttgggtccgttgaagatcgtgacacaatctaggaaaatcgtggcacgatt 18712493  T
Q  399 tcctctgaggaagactagtattta-agtgttcttgtgc 435  Q
    || || | ||||||||||||| ||  ||||||||||||    
T  18712494 tcttcaggggaagactagtatatattgtgttcttgtgc 18712531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 160 - 437
Target Start/End: Original strand, 8395191 - 8395467
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gttt 258  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  | || ||||||||| | ||    
T  8395191 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc-ggatgccgtgagctagggtt 8395288  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    |||||    |||||||| || |||| | || |||||||||||| || ||||||||||||| |||||||||| ||| ||||||||||| |  ||||||       
T  8395289 gcaggggtgcaaatcgtagcacgatttgggaaaatcgtgacacaatccagaaacttgctcgttaagtatccgtgataaggactggtcgtttcttgggtgg 8395388  T
Q  359 tacgtaaatcgtgacacgatct-ggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    |||| | ||||||||||||| | ||||||||||||||||||||  | ||||||| |||||| | ||||||||||||||||    
T  8395389 tacgcagatcgtgacacgatttgggaaatcgtgacacgatttcaacagaggaaggctagta-taaagtgttcttgtgcag 8395467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 159 - 628
Target Start/End: Original strand, 31985126 - 31985563
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagttt 258  Q
    ||||||||||||| ||||||||||||| |||| |||||||| ||||||||||||||| |||||||||||||||||||||   | |  ||||||||||||     
T  31985126 ttgttgagatttggcttcaaatttgtgatctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgataccgtgagctagtta 31985225  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    |||||  ||||||||                     |||||||||||   |||||||||  |||||| | |  || ||||||||||| ||||||| |||     
T  31985226 gcagggtgccaaatc---------------------gtgacacgattttcaaacttgctggttaagttttcaggataaggactggtcgtaccttgtgacg 31985304  T
Q  359 tacg--taaatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttg 456  Q
    ||||  | |||||||||||||| ||||||||||| ||||||||  || |  ||||||||||||||||||||||||||||||         || |||||||    
T  31985305 tacgcatcaatcgtgacacgatttggaaatcgtggcacgattttatcagttgaagactagtatttaagtgttcttgtgcagattttga--agtgagcttg 31985402  T
Q  457 gaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatc 556  Q
             |||||||||||||||||||||||||||||||||   |||||||||||| ||||||  |||  |||||||||||||   ||||||||||| |    
T  31985403 --------aagagagagaaacttggattacaaaggagggaactttagggttgagtgtttttgtattgaggatctcttgggttgg--gaaacattgtaaac 31985492  T
Q  557 accttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttca 628  Q
    ||||||||||||||  | |||||||| ||||||||| |||||||||| ||||||||||||||||||||||||    
T  31985493 accttgggtagtga-aatttcaccatgggaaggatcaaaagcttccttttgtgtcttctcttttagggttca 31985563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 159 - 437
Target Start/End: Original strand, 5135648 - 5135927
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-t 257  Q
    ||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||| |||||||  | || |||||| |||  |    
T  5135648 ttgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggt 5135745  T
Q  258 tgcaggacgccaaatcgtggcgcgatcttgggaaa-tcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttggga 356  Q
    ||||||    ||||||||| | |||| |||||||| ||||||||||||  |||||||||||| |||||||||||||| |||||| |||| | ||||||||    
T  5135746 tgcaggggtgcaaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggaccggtcgttccttggga 5135845  T
Q  357 catacgtaaatcgtgacacgatctgg--aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    |  ||| ||||||||||||||| |||  ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  5135846 cggacgcaaatcgtgacacgat-tggacaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 5135927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 160 - 437
Target Start/End: Original strand, 5137875 - 5138153
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-tt 258  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||| |||||||  | || |||||| |||  ||    
T  5137875 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggtt 5137972  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaa-tcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggac 357  Q
    |||||    ||||||||| | |||| |||||||| ||||||||||||  |||||||||||| |||||||||||||| |||||| |||| | |||||||||    
T  5137973 gcaggggtgcaaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggaccggtcgttccttgggac 5138072  T
Q  358 atacgtaaatcgtgacacgatctgg--aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
      ||| ||||||||||||||| |||  ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  5138073 ggacgcaaatcgtgacacgat-tggacaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 5138153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 168 - 345
Target Start/End: Original strand, 7124496 - 7124673
Alignment:
Q  168 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gtttgcaggacg 266  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||  | || ||||||||| | |||||||       
T  7124496 tttgtcttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttc-ggatgccgtgagctagggttgcaggggt 7124594  T
Q  267 ccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtc 345  Q
     ||||||||||| ||||  ||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  7124595 gcaaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 7124673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 173 - 435
Target Start/End: Complemental strand, 18856297 - 18856033
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgag-ctagtttgcaggacgccaaa 271  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||  ||||| |||||| | ||||||| ||| || |||    
T  18856297 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagccaagtttgctggatgcaaaa 18856199  T
Q  272 tcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtg 371  Q
    |||||||  |||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||  |||| || ||    | | ||||||    
T  18856198 tcgtggcaagatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc-aacctgggaaccgttgcagatcgtg 18856100  T
Q  372 acacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgc 435  Q
    ||| |||||  |||||||||| ||||||||| || | ||||||||||||| ||  ||||||||||||    
T  18856099 acatgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgc 18856033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 173 - 435
Target Start/End: Original strand, 45347329 - 45347593
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gtttgcaggacgccaaa 271  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||  | | || ||||||| | |||||| ||| || |||    
T  45347329 cttcaaatttgtggtctggaagaacaaagaaatcgtgacacgattttggaatcgtgacacgattaga-gatgccgtgagccaagtttgctggatgcaaaa 45347427  T
Q  272 tcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtg 371  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||  |||| || ||    | | ||||||    
T  45347428 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc-aacctgggaaccgttgcagatcgtg 45347526  T
Q  372 acacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgc 435  Q
    |||||||||  |||||||||| ||||||||| || | |||| |||||||| ||  ||||||||||||    
T  45347527 acacgatctagggaaatcgtggcacgatttcttcaggggaaaactagtatatattgtgttcttgtgc 45347593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 466 - 632
Target Start/End: Original strand, 16623064 - 16623225
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||| ||||||||||    
T  16623064 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaacaccttgggt 16623161  T
Q  566 agtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    ||||| || |||||||||||||||||| |||||||||| |||||  || ||||||||| ||||||||    
T  16623162 agtga-gatttcaccattggaaggatcaaaagcttccttttgtg--ttttcttttaggattcatatt 16623225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 466 - 629
Target Start/End: Original strand, 5396442 - 5396601
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    |||||||||||||||||||||||||||||  ||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||| ||||||||||    
T  5396442 agagagagaaacttggattacaaaggaggttactttagggttgagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaacaccttgggt 5396539  T
Q  566 agtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat 629  Q
    ||||| || |||||||||||||| ||| ||||||| || |||||||||||| ||||||||||||    
T  5396540 agtga-gatttcaccattggaagaatcaaaagctttcttttgtgtcttctc-tttagggttcat 5396601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 466 - 632
Target Start/End: Original strand, 16628643 - 16628804
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||| ||||||| ||||||||| |||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||| ||||||||||    
T  16628643 agagagagaaaattggattgcaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaacaccttgggt 16628740  T
Q  566 agtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    ||||| || |||||||||||||||||| |||||||||| |||||  || ||||||||| ||||||||    
T  16628741 agtga-gatttcaccattggaaggatcaaaagcttccttttgtg--ttttcttttaggattcatatt 16628804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 466 - 618
Target Start/End: Original strand, 5268971 - 5269121
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||| |||||||| |    
T  5268971 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaacaccttggat 5269068  T
Q  566 agtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||| || ||||||||||||||||||  |||||||||| |||||| |||||||    
T  5269069 agtga-gatttcaccattggaaggatcaaaaagcttccttttgtgttttctctt 5269121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 466 - 618
Target Start/End: Original strand, 6743186 - 6743335
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||| |||   ||| |||||||||||||||| |||  |||||||||||||   ||||||||||| ||||||||||    
T  6743186 agagagagaaacttggattacaaaggaggtaacttgaggtttgagtgtctttgtagcgaggatctcttgggttgg--gaaacattgtaaacaccttgggt 6743283  T
Q  566 agtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctctt 618  Q
    | ||| || |||||||||||||||||| ||| |||||| |||||| |||||||    
T  6743284 aatga-gatttcaccattggaaggatcaaaaacttccttttgtgttttctctt 6743335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 466 - 618
Target Start/End: Complemental strand, 3777875 - 3777725
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||| ||||||||||    
T  3777875 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaacaccttgggt 3777778  T
Q  566 agtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||| || ||||||||||||| ||||  |||||||||| |||| | |||||||    
T  3777777 agtga-gatttcaccattggaatgatcaaaaagcttccttttgtattttctctt 3777725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 469 - 618
Target Start/End: Original strand, 8689270 - 8689416
Alignment:
Q  469 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagt 568  Q
    |||||||||||||||||||||||||| |||   |||||| ||||||||||||| |||  |||||||||||||   ||||||| ||| |||||||| ||||    
T  8689270 gagagaaacttggattacaaaggaggtaactttagggtttagtgtctttgtagtgaggatctcttgggttgg--gaaacattttaaacaccttggatagt 8689367  T
Q  569 gaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctctt 618  Q
    || || |||||||||||||||||| |||| ||||| ||||||||||||||    
T  8689368 ga-gatttcaccattggaaggatcaaaagtttccttttgtgtcttctctt 8689416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 475 - 565
Target Start/End: Original strand, 18712581 - 18712671
Alignment:
Q  475 aacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    |||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||    
T  18712581 aacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgttatcaccttgggt 18712671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 470 - 634
Target Start/End: Complemental strand, 5143582 - 5143422
Alignment:
Q  470 agagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtg 569  Q
    |||||||||||||||||| |||||| |||   |||||||||||||||||||| |||  |||||||| ||||   |||| |||||| |||||| |||||||    
T  5143582 agagaaacttggattacagaggaggtaactttagggttgagtgtctttgtagtgaggatctcttggattgg--gaaactttgtaaacaccttaggtagtg 5143485  T
Q  570 aggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatattct 634  Q
    | || ||||||||||||||||||  ||||||||| |||||| ||||| |||||||||||||||||    
T  5143484 a-gatttcaccattggaaggatcataagcttccttttgtgttttctc-tttagggttcatattct 5143422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 466 - 610
Target Start/End: Original strand, 36315001 - 36315142
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||| ||||||||||||||||||||| |||   |||||| |||||||||||||||||  |||||||||||||   ||||||||||| ||| ||||||    
T  36315001 agagagataaacttggattacaaaggaggtaactttagggtttagtgtctttgtagagaggatctcttgggttgg--gaaacattgtaaacacattgggt 36315098  T
Q  566 agtgaggagttcaccattggaaggatctaaagcttcctcttgtgt 610  Q
    ||||| || || ||||||||||||||| |||||||||| ||||||    
T  36315099 agtga-gatttaaccattggaaggatcaaaagcttccttttgtgt 36315142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 466 - 610
Target Start/End: Original strand, 36329210 - 36329351
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||| ||||||||||||||||||||| |||   |||||| |||||||||||||||||  |||||||||||||   ||||||||||| ||| ||||||    
T  36329210 agagagataaacttggattacaaaggaggtaactttagggtttagtgtctttgtagagaggatctcttgggttgg--gaaacattgtaaacacattgggt 36329307  T
Q  566 agtgaggagttcaccattggaaggatctaaagcttcctcttgtgt 610  Q
    ||||| || || ||||||||||||||| |||||||||| ||||||    
T  36329308 agtga-gatttaaccattggaaggatcaaaagcttccttttgtgt 36329351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 254 - 435
Target Start/End: Original strand, 45356891 - 45357074
Alignment:
Q  254 agtttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttg 353  Q
    ||||||| ||| || |||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||  |||| |    
T  45356891 agtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc-aacctgg 45356989  T
Q  354 ggacatacgtaaatcgtgacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgc 435  Q
    | ||    | | |||||||||||||||  |||||||||||||||||||| |||| ||| ||||||||| ||  ||||||||||||    
T  45356990 gaaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttctggggaggactagtatatattgtgttcttgtgc 45357074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 466 - 592
Target Start/End: Complemental strand, 10047707 - 10047584
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||  |||  |||||||||||||   ||||||||||| ||||||||||    
T  10047707 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtaatgaggatctcttgggttgg--gaaacattgtaaacaccttgggt 10047610  T
Q  566 agtgaggagttcaccattggaaggatc 592  Q
    ||||| || ||||||||||||||||||    
T  10047609 agtga-gatttcaccattggaaggatc 10047584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 464 - 592
Target Start/End: Original strand, 25861802 - 25861927
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    ||||||||||||||||||||||||||| ||| |||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||| |||||||     
T  25861802 ttagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaacaccttga 25861899  T
Q  564 gtagtgaggagttcaccattggaaggatc 592  Q
    ||||||| || ||||||||||||||||||    
T  25861900 gtagtga-gatttcaccattggaaggatc 25861927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 159 - 632
Target Start/End: Complemental strand, 5148303 - 5147842
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagttt 258  Q
    ||||||| | ||| ||||||||||||||| |||||||| || |||||||||||||||||||  || |||||||||||||     ||||||||||||||||    
T  5148303 ttgttgaaaattggcttcaaatttgtggtttggaagaatagagaaatcgtgacacgattttatcaccgtgacacgattttgcaatgtcgtgagctagttt 5148204  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    |||||  | | ||||||||| |||| ||| |||| | ||||||||||   |||||| ||   || || | |  || ||||  ||||| ||||||||| |     
T  5148203 gcagggtgaccaatcgtggcacgattttgtgaaaacttgacacgattttcaaacttactggatacgttttcaggataagg-ttggtcgtaccttgggtcg 5148105  T
Q  359 tacgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttg 456  Q
    |||| |  ||||||| |||||| || ||| ||||||||||| |  || |   ||||||  ||| |||||||||||||||||       || |||||||||    
T  5148104 tacgcaccaatcgtgtcacgatttgcaaaacgtgacacgatcttatcagtttaagactgctatataagtgttcttgtgcagattttgaag-gagagcttg 5148006  T
Q  457 gaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatc 556  Q
     ||         ||||||||||||||||||| |||||| |||   |||||| |||||||||||||  ||  ||||||| |||||   ||||||||||| |    
T  5148005 aaa--------tgagagaaacttggattacacaggaggtaactttagggtttagtgtctttgtagtaaggatctcttgagttgg--gaaacattgtaaac 5147916  T
Q  557 accttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    || |||| || ||| || ||||||||||||||||||  ||||||||| |||||| ||||| |||||||||||||||    
T  5147915 acattggataatga-gatttcaccattggaaggatcataagcttccttttgtgttttctc-tttagggttcatatt 5147842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 4 - 144
Target Start/End: Original strand, 44864160 - 44864299
Alignment:
Q  4 tcagaaaacaacctgcatcactcaagaacctaagtattcaaaggcaagggtcaaaagcttcggcgcaaatggagaaagcggacatcatccaagaggtgag 103  Q
    |||||||| ||||| ||||| || |||| || |||||||||||||| |||||||||| || ||  ||  |||||||||  ||  ||||||||||||||||    
T  44864160 tcagaaaa-aacctccatcattcgagaagctcagtattcaaaggcaggggtcaaaagttttggtacagttggagaaagaagatgtcatccaagaggtgag 44864258  T
Q  104 ctttatgtgtattgaataaatgtgccacctcagtgaggagt 144  Q
    ||||||||||||||||||||||||  |||| ||||||||||    
T  44864259 ctttatgtgtattgaataaatgtgttacctgagtgaggagt 44864299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 173 - 236
Target Start/End: Complemental strand, 18860509 - 18860446
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatt 236  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  18860509 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 18860446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 466 - 618
Target Start/End: Complemental strand, 5112564 - 5112413
Alignment:
Q  466 agagagagaaacttg-gattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttggg 564  Q
    ||||||||||||||| |||||||||||||| ||    ||| |||||||||||||| | |||  ||||||||||||| |||  |||||||| |||||||||    
T  5112564 agagagagaaacttgagattacaaaggaggtaattttaggtttgagtgtctttgttgtgaggttctcttgggttgggaaa--cattgtaaacaccttggg 5112467  T
Q  565 tagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    |||||| || ||||||||||||||||||  |||||||||| || ||| |||||||    
T  5112466 tagtga-gatttcaccattggaaggatcaaaaagcttccttttatgttttctctt 5112413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 466 - 618
Target Start/End: Original strand, 38152208 - 38152358
Alignment:
Q  466 agagagagaaactt-ggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttggg 564  Q
    ||||||||||| || |||||||||| |||| |||   |||||||||||||||||||| |||  ||||||||| ||| ||| |  |||||| |||||||||    
T  38152208 agagagagaaaatttggattacaaatgaggtaactttagggttgagtgtctttgtagtgaggatctcttgggatgggaaata--ttgtaaacaccttggg 38152305  T
Q  565 tagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctctt 618  Q
    ||||||  | |||||||||||||||||| |||||||||  |||||| |||||||    
T  38152306 tagtgacaa-ttcaccattggaaggatcaaaagcttccatttgtgttttctctt 38152358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 38 - 140
Target Start/End: Original strand, 44849938 - 44850040
Alignment:
Q  38 tattcaaaggcaagggtcaaaagcttcggcgcaaatggagaaagcggacatcatccaagaggtgagctttatgtgtattgaataaatgtgccacctcagt 137  Q
    |||||||||||| |||||| ||| || ||| || ||||||||||  ||  |||||||||||||||||||||||||||||||||||||||  |||||| ||    
T  44849938 tattcaaaggcaggggtcagaagttttggctcagatggagaaagaagatgtcatccaagaggtgagctttatgtgtattgaataaatgtatcacctcggt 44850037  T
Q  138 gag 140  Q
    |||    
T  44850038 gag 44850040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 466 - 592
Target Start/End: Complemental strand, 54867505 - 54867385
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||||||||||||      |||||| |||  |||||    
T  54867505 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgagaatctcttgggttggaa-----gttgtaaacactatgggt 54867411  T
Q  566 agtgaggagttcaccattggaaggatc 592  Q
    ||||| || ||||||||||||||||||    
T  54867410 agtga-gatttcaccattggaaggatc 54867385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 464 - 591
Target Start/End: Original strand, 42599344 - 42599467
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    |||| |||||||||||||||||||||||||| |||   | |||||||||||||||||| |||  |||||| ||||||   ||||||| ||| ||||||||    
T  42599344 ttagtgagagaaacttggattacaaaggaggtaacttta-ggttgagtgtctttgtagtgaggttctcttcggttgg--gaaacattctaaacaccttgg 42599440  T
Q  564 gtagtgaggagttcaccattggaaggat 591  Q
    ||||||| || |||||||||||||||||    
T  42599441 gtagtga-gatttcaccattggaaggat 42599467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 462 - 618
Target Start/End: Complemental strand, 24334144 - 24333987
Alignment:
Q  462 gcttagagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttggaaaaaacattgtaatcac 558  Q
    |||| ||||||||||||||| | ||||||| ||| |||   ||||||||| |||||||||| |||  |||||||  |||||| |||  |||||||| |||    
T  24334144 gctttgagagagaaacttgggaatacaaagaaggtaactttagggttgagagtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacac 24334047  T
Q  559 cttgggtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    |||||||||||| || ||||||||||||||||||  |||||||||| |||||| |||||||    
T  24334046 cttgggtagtga-gatttcaccattggaaggatcaaaaagcttccttttgtgttttctctt 24333987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 29761242 - 29761182
Alignment:
Q  157 tattgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  29761242 tattgttgatatttg-cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 29761182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 44838131 - 44838221
Alignment:
Q  36 agtattcaaaggcaagggtcaaaagcttcggcgcaaatggagaaagcggacatcatccaagaggtgagctttatgtgtattgaataaatgt 126  Q
    ||||||||||||||||||||||||| ||  || || ||||||||| | ||  ||||||||||||||| |||||||| |||||| |||||||    
T  44838131 agtattcaaaggcaagggtcaaaagtttttgctcagatggagaaacctgatgtcatccaagaggtgaactttatgtctattgattaaatgt 44838221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 5143867 - 5143807
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 220  Q
    |||||| | ||| ||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  5143867 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttg 5143807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 8689049 - 8689097
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgg 221  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  8689049 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttgg 8689097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 461 - 610
Target Start/End: Original strand, 3793843 - 3793993
Alignment:
Q  461 agcttagagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttggaaaaaacattgtaatca 557  Q
    ||||| ||||||||||||||| | || |||||||| |||   |||||||||||||||| ||| |||  |||||||  ||||||||||  |||||||| ||    
T  3793843 agctttgagagagaaacttgggaatataaaggaggtaactttagggttgagtgtctttatagtgaggttctcttgagggttggaaaa--cattgtaaaca 3793940  T
Q  558 ccttgggtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgt 610  Q
    ||||||||||||| || |||||||| | |||||||  |||||||||| ||||||    
T  3793941 ccttgggtagtga-gatttcaccatagaaaggatcaaaaagcttccttttgtgt 3793993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 16628358 - 16628403
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  16628358 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 16628403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 38151923 - 38151968
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  38151923 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 38151968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 565
Target Start/End: Original strand, 51336933 - 51337035
Alignment:
Q  462 gcttagagagagaaactt-ggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcacct 560  Q
    |||| ||||||||||||| ||| ||||||||| | |||   |||||||| ||||||||||| |||  |||||||||||||  |||||||||||| |||||    
T  51336933 gctttgagagagaaacttaggaatacaaaggaagtaactttagggttgaatgtctttgtagtgaggttctcttgggttgg--aaaacattgtaaacacct 51337030  T
Q  561 tgggt 565  Q
    |||||    
T  51337031 tgggt 51337035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 3778160 - 3778116
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 217  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||    
T  3778160 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 3778116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 521 - 564
Target Start/End: Original strand, 45347678 - 45347721
Alignment:
Q  521 gagagtgtctcttgggttggaaaaaacattgtaatcaccttggg 564  Q
    ||||||||||||| |||||| |||||||||||||||||||||||    
T  45347678 gagagtgtctcttaggttgggaaaaacattgtaatcaccttggg 45347721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 5268704 - 5268750
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgatttt 219  Q
    ||||||||||||||| ||||||||||| |||||||||||| ||||||    
T  5268704 cttcaaatttgtggtttggaagaacagagaaatcgtgacaggatttt 5268750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 565
Target Start/End: Complemental strand, 6542480 - 6542378
Alignment:
Q  462 gcttagagagagaaactt-ggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcacct 560  Q
    |||| ||||||||||| | ||| ||||||||||| |||   |||||||||||||||||||  |||  |||||||||||||   ||||||||||| |||||    
T  6542480 gctttgagagagaaacctaggaatacaaaggaggtaactttagggttgagtgtctttgtaatgaggttctcttgggttgg--gaaacattgtaaacacct 6542383  T
Q  561 tgggt 565  Q
    |||||    
T  6542382 tgggt 6542378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 6742901 - 6742946
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||||    
T  6742901 cttcaaatttatggtttggaagaacagagaaatcgtgacacgattt 6742946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 10047977 - 10047932
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||| |||||||||||  |||||||||||||||||    
T  10047977 cttcaaatttgtggtttggaagaacagataaatcgtgacacgattt 10047932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 16622783 - 16622824
Alignment:
Q  177 aaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||| ||||||||||| ||||||||||||||||||    
T  16622783 aaatttgtggtttggaagaacagagaaatcgtgacacgattt 16622824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 521 - 564
Target Start/End: Complemental strand, 5732887 - 5732844
Alignment:
Q  521 gagagtgtctcttgggttggaaaaaacattgtaatcaccttggg 564  Q
    |||||||| |||| |||||| |||||||||||||||||||||||    
T  5732887 gagagtgtttcttaggttgggaaaaacattgtaatcaccttggg 5732844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 466 - 618
Target Start/End: Original strand, 39774075 - 39774226
Alignment:
Q  466 agagagagaaacttggatt-acaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttggg 564  Q
    |||||||||||||||| || |||||||||| |||   |||||||||  | ||||||  |||  ||||||| ||||| |||  |||||||| |||||||||    
T  39774075 agagagagaaacttgggtttacaaaggaggtaactttagggttgagattatttgtaacgaggttctcttgagttgggaaa--cattgtaaacaccttggg 39774172  T
Q  565 tagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    |||||| |  ||||||||||||| ||||  |||||||||| |||| | |||||||    
T  39774173 tagtga-gttttcaccattggaatgatcaaaaagcttccttttgtattttctctt 39774226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 36314716 - 36314761
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||| | |||||| || ||||||||||||||||||    
T  36314716 cttcaaatttgtggtttcgaagaatagagaaatcgtgacacgattt 36314761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 36328925 - 36328970
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||| | |||||| || ||||||||||||||||||    
T  36328925 cttcaaatttgtggtttcgaagaatagagaaatcgtgacacgattt 36328970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 54867790 - 54867745
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||| |||||||| || ||| ||||||||||||||    
T  54867790 cttcaaatttgtggtttggaagaatagagaagtcgtgacacgattt 54867745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 303; Significance: 1e-170; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 173 - 632
Target Start/End: Original strand, 4759546 - 4760006
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  4759546 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaat 4759645  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||| |||||||| ||  ||| |||||||||    
T  4759646 cgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatccttgataaggactggtcataccttggaacggacgcaaatcgtga 4759745  T
Q  373 cacgatctggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgcagnnnnnnnagagagagcttggaagagcttagagag 471  Q
    |||||||||||||||||||||||||||| || ||||||||||||||| ||  ||||||||||||         |  ||||||||||||||||||||||||    
T  4759746 cacgatctggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgc--ttgtttgaaggagagcttggaagagcttagagag 4759843  T
Q  472 agaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggtt-ggaaaaaacattgtaatcaccttgggtagtga 570  Q
    |||| |||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  4759844 agaatcttggattgcaaaggaggtaaccaaagggttgagtgtctttgtagagagagtctcttgggttgggaaaaaacattgtaatcaccttgggtagtga 4759943  T
Q  571 ggagttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    ||||||||  | |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4759944 ggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 4760006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 302; E-Value: 1e-169
Query Start/End: Original strand, 173 - 632
Target Start/End: Complemental strand, 30656270 - 30655812
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30656270 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgccaaat 30656171  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||  |||||||| || ||| |||||||||    
T  30656170 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttgggtcagacgcaaatcgtga 30656071  T
Q  373 cacgatctggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgcagnnnnnnnagagagagcttggaagagcttagagag 471  Q
    |||||||||||||||||| ||||||| | || ||||||||||||||| ||  |||||||||||          |  ||||||||||||||||||| ||||    
T  30656070 cacgatctggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtg--tttttttgaaggagagcttggaagagcttaaagag 30655973  T
Q  472 agaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgag 571  Q
    || ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30655972 ag-aacttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 30655874  T
Q  572 gagttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    |||||||  | |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30655873 gagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 30655812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 173 - 632
Target Start/End: Original strand, 18852639 - 18853098
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18852639 cttcaaatttgtggtctggaagaacagagaaatcgtgatacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgccaaat 18852738  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||  ||| ||||||||||| ||||||||| || ||| | |||||||    
T  18852739 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcataccttgggtcagacgcagatcgtga 18852838  T
Q  373 cacgatctggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgcagnnnnnnnagagagagcttggaagagcttagagag 471  Q
    |||||| ||||||||||| ||||||| | || ||||||||||||||| ||  ||||||||||||         |  ||||||||||||||||||||||||    
T  18852839 cacgatttggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc--ttttttgaaggagagcttggaagagcttagagag 18852936  T
Q  472 agaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgag 571  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  18852937 agaaacttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgggtagtgag 18853036  T
Q  572 gagttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    |||||||  | |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18853037 gagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 18853098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 297; E-Value: 1e-166
Query Start/End: Original strand, 173 - 632
Target Start/End: Complemental strand, 36980002 - 36979543
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  36980002 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaat 36979903  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||  ||| ||||||||||| |||||||||   |||| |||||||||    
T  36979902 cgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtcataccttgggttgtacgcaaatcgtga 36979803  T
Q  373 cacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtg-cagnnnnnnnagagagagcttggaagagcttagagag 471  Q
    |||||||||||||||||| ||||||| | || ||||||| ||||||||||||||||||||||           ||| |||||||||||||||||||||||    
T  36979802 cacgatctggaaatcgtggcacgattgcttcagaggaaggctagtatttaagtgttcttgtgttcttttttggaga-agagcttggaagagcttagagag 36979704  T
Q  472 agaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgag 571  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||    
T  36979703 agaaacttggattacaaagaagggaaccaaagggttgagtgtctttgtagagagtgtctcttaggttgg-gaaaacattgtaatcaccttgggtagtgag 36979605  T
Q  572 gagttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    |||||||  | |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36979604 gagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 36979543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 173 - 632
Target Start/End: Original strand, 18870033 - 18870492
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18870033 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagatgtcgtgagctagtttgcaggacgccaaat 18870132  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||  | | ||||||||||| ||||||||| || ||| | |||||||    
T  18870133 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggactggtcataccttgggtcagacgcagatcgtga 18870232  T
Q  373 cacgatctggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgcagnnnnnnnagagagagcttggaagagcttagagag 471  Q
    |||||| || |||||||| ||||||| | || ||| ||||||||||| ||  ||||||||||||         |  ||||||||||||||||||||||||    
T  18870233 cacgatttgaaaatcgtggcacgattgcttcagagaaagactagtatatattgtgttcttgtgc--ttttttgaaggagagcttggaagagcttagagag 18870330  T
Q  472 agaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgag 571  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18870331 agaaacatggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 18870430  T
Q  572 gagttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    |||||||  | |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18870431 gagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 18870492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 160 - 632
Target Start/End: Original strand, 1261414 - 1261886
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||| |||||  |||||||||||||| ||||||||||  ||||||| ||||||| ||||||||||||||||||||||  | || ||||||||||||||    
T  1261414 tgttgatatttggtttcaaatttgtggtttggaagaacacagaaatcgcgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctagtttg 1261513  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||||| | ||||||||||||||||||||||||||   |||||||||| |||||||||||||| ||||||||||| |||||||||||||    
T  1261514 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacat 1261613  T
Q  360 acgt--aaatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgcagnnnnnnnagagagagcttg 456  Q
    ||||  ||||||||||||||||||||||||||||||||||||  || ||||||| ||||||||| ||||||||||||||         |  |||||||||    
T  1261614 acgttcaaatcgtgacacgatctggaaatcgtgacacgattttatcagaggaaggctagtatttaaagtgttcttgtgc--ttttttgaaggagagcttg 1261711  T
Q  457 gaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatc 556  Q
    ||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  1261712 gaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatc 1261811  T
Q  557 accttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1261812 accttgggtagtga-gatttcaccattggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 1261886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 173 - 620
Target Start/End: Complemental strand, 6311923 - 6311476
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6311923 cttcaaatttgtggtctggaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgccaaat 6311824  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||  | | ||||||| |||  |||||||| || | | |||||||||    
T  6311823 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggacttgtc-aaccttgggtcagatgcaaatcgtga 6311725  T
Q  373 cacgat--ctggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgcagnnnnnnnagagagagcttggaagagcttagag 469  Q
    ||||||    |||||||||| ||| ||||| || ||||||||||||||| ||  ||||||||||||         |||||||||||||||||||||||||    
T  6311724 cacgattgtgggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttcttgtgc--ttttttgagagagagcttggaagagcttagag 6311627  T
Q  470 agagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtg 569  Q
    | || |||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6311626 atag-aacttggatagcaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtg 6311528  T
Q  570 aggagttcacca-ttggaaggatctaaagcttcctcttgtgtcttctctttt 620  Q
    |||||||||  | ||||||||||| |||||||||||| ||| ||||||||||    
T  6311527 aggagttcattagttggaaggatcaaaagcttcctctagtgacttctctttt 6311476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 223 - 632
Target Start/End: Original strand, 10688661 - 10689073
Alignment:
Q  223 atcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcatta 322  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  10688661 atcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtta 10688760  T
Q  323 agtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtgacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtatt 420  Q
    ||||||  | | ||||||| |||  |||||||| || | | |||||||||||||||    |||||||||| ||| ||||| || |||||||||||||||     
T  10688761 agtatcactaataaggacttgtca-accttgggtcagatgcaaatcgtgacacgattgtgggaaatcgtggcacaatttcttcagaggaagactagtata 10688859  T
Q  421 taa-gtgttcttgtgcagnnnnnnnagagagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgt 519  Q
    ||  ||||||||||||||       | |||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10688860 tattgtgttcttgtgcagttttg--aaagagagcttggaagagctaagaaagagaaacttggataacaaaggagggaaccaaagggttgagtgtctttgt 10688957  T
Q  520 agagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgaggagttcaccatt---ggaaggatctaaagcttcctcttgtgtcttctc 616  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  | |   || ||||||||||||||||||| ||||||||||    
T  10688958 agagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttgggggaggatctaaagcttcctctagtgtcttctc 10689057  T
Q  617 ttttagggttcatatt 632  Q
    ||||||||||||||||    
T  10689058 ttttagggttcatatt 10689073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 157 - 632
Target Start/End: Complemental strand, 26288520 - 26288055
Alignment:
Q  157 tattgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt 256  Q
    ||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||   | || |||||||| ||    
T  26288520 tattgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggt 26288421  T
Q  257 ttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttggga 356  Q
    |||||||  ||||||||||| | | |||||||||||||||||||| |||   |||||||||| |||||| ||| ||| ||||||||||| ||||||| ||    
T  26288420 ttgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgtga 26288321  T
Q  357 catacgt--aaatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagct 454  Q
    | |||||   ||| ||| ||||| |||||||||||||||||||||  || | ||||| |||||||||||||||||||||||||       |             
T  26288320 cgtacgttccaatagtgtcacgacctggaaatcgtgacacgattttatcagtggaaggctagtatttaagtgttcttgtgcagattttgga--------- 26288230  T
Q  455 tggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaa 554  Q
      ||||||||||||||||||||||||||||||||||| ||||||   |||||||| |||||||||||||||  ||||||| ||||| |||||||||||||    
T  26288229 --gaagagcttagagagagaaacttggattacaaaggggggaactctagggttgaatgtctttgtagagagaatctcttgagttgggaaaaacattgtaa 26288132  T
Q  555 tcaccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
     ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26288131 acaccttgggtagtga-gatttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 26288055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 157 - 632
Target Start/End: Complemental strand, 26301777 - 26301312
Alignment:
Q  157 tattgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt 256  Q
    ||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||   | || |||||||| ||    
T  26301777 tattgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggt 26301678  T
Q  257 ttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttggga 356  Q
    |||||||  ||||||||||| | | |||||||||||||||||||| |||   |||||||||| |||||| ||| ||| ||||||||||| ||||||| ||    
T  26301677 ttgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgtga 26301578  T
Q  357 catacgt--aaatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagct 454  Q
    | |||||   ||| ||| ||||| |||||||||||||||||||||  || | ||||| |||||||||||||||||||||||||       |             
T  26301577 cgtacgttccaatagtgtcacgacctggaaatcgtgacacgattttatcagtggaaggctagtatttaagtgttcttgtgcagattttgga--------- 26301487  T
Q  455 tggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaa 554  Q
      ||||||||||||||||||||||||||||||||||| ||||||   |||||||| |||||||||||||||  ||||||| ||||| |||||||||||||    
T  26301486 --gaagagcttagagagagaaacttggattacaaaggggggaactctagggttgaatgtctttgtagagagaatctcttgagttgggaaaaacattgtaa 26301389  T
Q  555 tcaccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
     ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26301388 acaccttgggtagtga-gatttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 26301312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 157 - 632
Target Start/End: Complemental strand, 26313771 - 26313306
Alignment:
Q  157 tattgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt 256  Q
    ||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||   | || |||||||| ||    
T  26313771 tattgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggt 26313672  T
Q  257 ttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttggga 356  Q
    |||||||  ||||||||||| | | |||||||||||||||||||| |||   |||||||||| |||||| ||| ||| ||||||||||| ||||||| ||    
T  26313671 ttgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgtga 26313572  T
Q  357 catacgt--aaatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagct 454  Q
    | |||||   ||| ||| ||||| |||||||||||||||||||||  || | ||||| |||||||||||||||||||||||||       |             
T  26313571 cgtacgttccaatagtgtcacgacctggaaatcgtgacacgattttatcagtggaaggctagtatttaagtgttcttgtgcagattttgga--------- 26313481  T
Q  455 tggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaa 554  Q
      ||||||||||||||||||||||||||||||||||| ||||||   |||||||| |||||||||||||||  ||||||| ||||| |||||||||||||    
T  26313480 --gaagagcttagagagagaaacttggattacaaaggggggaactctagggttgaatgtctttgtagagagaatctcttgagttgggaaaaacattgtaa 26313383  T
Q  555 tcaccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
     ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26313382 acaccttgggtagtga-gatttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 26313306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 173 - 565
Target Start/End: Original strand, 7289439 - 7289831
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggt-gtcgtgagctagtttgcaggacgccaaa 271  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||  | | ||||||||||||||||||||||||    
T  7289439 cttcaaatttgtggtctggaagaacagagaaatagtgacacgattttggcatcgtgacacgatttcaagggagccatgagctagtttgcaggacgccaaa 7289538  T
Q  272 tcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtg 371  Q
    ||||| | ||||||||| ||||||||||||||||||||||||||||| |||||||||| ||| ||||||| ||| ||||||||  || | | ||||||||    
T  7289539 tcgtgacacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggacttgtc-taccttggatcagatgcaaatcgtg 7289637  T
Q  372 acacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgcagnnnnnnnagagagagcttggaagagcttaga 468  Q
    |||||||||  |||||||||| ||||||||| || ||||||||||||||| ||  ||||||||||||         | ||||||||||||||||||||||    
T  7289638 acacgatcttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc--ttttttgaaagagagcttggaagagcttaga 7289735  T
Q  469 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||| |||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  7289736 gagag-aacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 7289831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 173 - 435
Target Start/End: Original strand, 10683751 - 10684015
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10683751 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgccaaat 10683850  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||  || | |||||    | | |||||||    
T  10683851 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtc-aacttggggaccgttgcagatcgtga 10683949  T
Q  373 cacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
    ||||||||  |||||||||| |||||||||||| |   | ||||||||||| ||||||||||||||    
T  10683950 cacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgc 10684015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 173 - 378
Target Start/End: Original strand, 33037299 - 33037504
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  33037299 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaat 33037398  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||| | |||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||| | |||||| ||  ||| |||||||||    
T  33037399 cgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtcatgccttggaacggacgcaaatcgtga 33037498  T
Q  373 cacgat 378  Q
    ||||||    
T  33037499 cacgat 33037504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 448 - 632
Target Start/End: Original strand, 33037554 - 33037738
Alignment:
Q  448 gagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaac 547  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  33037554 gagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtcttcgtagagagtgtctcttgggttgggaaaaac 33037653  T
Q  548 attgtaatcaccttgggtagtgaggagttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    |||||||||||||||||||||||||||||||  | |||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  33037654 attgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctc-tttagggttcatatt 33037738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 173 - 565
Target Start/End: Original strand, 25327676 - 25328058
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||  |  ||||||||||||||||||||||||||    
T  25327676 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcttcgtggcacgatttcaagtggctgtgagctagtttgcaggacgccaaat 25327775  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    | |||| ||||||||||||||||||||||||||||||||||||||| |||||||||  ||| ||||||| |||  |||||||| |    | |  ||||||    
T  25327776 catggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-aaccttgggtccgttgcagctcgtga 25327874  T
Q  373 cacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgcagnnnnnnnagagagagcttggaagagctt-aga 468  Q
    ||||||||  |||||||||| ||||||||| || | ||||||||||||| ||  ||||||||||||          ||         ||||| ||| |||    
T  25327875 cacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgc----ttttttga--------agaagaacttaaga 25327962  T
Q  469 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||| ||||||||   ||||||||||| || | |||||| |||||||||  |||||||||||||||||||| ||||||||||||||||||||||||    
T  25327963 gagag-aacttggagatcaaaggagggatcctatgggttgtgtgtctttgatgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 25328058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 160 - 437
Target Start/End: Original strand, 3439088 - 3439363
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||  |||| |||||||||| |||    
T  3439088 tgttgagatt-gtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttg 3439186  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  || |||||||| | |||| ||||||||||||||||||||   ||||||||||| |||||||||||||| ||||||||||| |  ||||||   |    
T  3439187 cagggtgcaaaatcgtgacacgat-ttgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggt 3439285  T
Q  360 acgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||| | |||||| ||||||  || ||||||||||||||||||  | |||||||||||||| | ||||||||||||||||    
T  3439286 acgcatatcgtggcacgattgggaaaatcgtgacacgatttcaacagaggaagactagta-taaagtgttcttgtgcag 3439363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 160 - 437
Target Start/End: Original strand, 2627318 - 2627597
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  | |  |||||||| |||||    
T  2627318 tgttgagatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgattccgtgagctggtttg 2627417  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    || |  ||||||||||| | |||| |||||||||||||||||||||   |||||||||| |||||| ||| ||| ||||| ||||| |  |||| ||| |    
T  2627418 catggtgccaaatcgtgacacgattttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggattggtcgtttcttgtgacgt 2627517  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||| |  | | ||||||||||||| |||||||||||||||||  ||   ||| | |||||||||||||||||||||||||    
T  2627518 acgcaccatttgtgacacgatctgtaaatcgtgacacgattttatcgttggagggctagtatttaagtgttcttgtgcag 2627597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 160 - 437
Target Start/End: Complemental strand, 42575909 - 42575631
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-tt 258  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||  | || |||||| |||  ||    
T  42575909 tgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcg-gatgccgtgagttagggtt 42575812  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaa-tcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggac 357  Q
    |||||    ||||||||| | |||| |||||||| ||||||||||||  |||||||||||| |||||||||||||| ||||||||||||| |||||||||    
T  42575811 gcaggggtgcaaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtctttccttgggac 42575712  T
Q  358 atacgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
      ||| |||||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  42575711 ggacgcaaatcgtgacacgattgggcaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 42575631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 173 - 435
Target Start/End: Original strand, 39784337 - 39784601
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgag-ctagtttgcaggacgccaaa 271  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||  ||||| |||||| | ||||||| ||| || |||    
T  39784337 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagccaagtttgctggatgcaaaa 39784435  T
Q  272 tcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtg 371  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |  |||||||||  ||| |||||||||||  |||| |||||    | | ||||||    
T  39784436 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtc-aacctggggaccgttgcagatcgtg 39784534  T
Q  372 acacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgc 435  Q
    |||||||||  |||||||||| ||||||||| || | ||||||||||||| ||  ||||||||||||    
T  39784535 acacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgc 39784601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 505 - 632
Target Start/End: Original strand, 31071035 - 31071161
Alignment:
Q  505 gttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatctaaagcttcctc 604  Q
    ||||||||||||||||| |||  ||||||||||||| ||||||||||||| |||||||||||||||| | ||||||||||||||||||| ||||||||||    
T  31071035 gttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttgggtagtgag-atttcaccattggaaggatcttaagcttcctc 31071133  T
Q  605 ttgtgtcttctcttttagggttcatatt 632  Q
    ||||||||||||||||||||||||||||    
T  31071134 ttgtgtcttctcttttagggttcatatt 31071161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 160 - 378
Target Start/End: Original strand, 15290143 - 15290361
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gttt 258  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||||  | || |||||| || | ||    
T  15290143 tgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttc-ggatgccgtgagttagggtt 15290240  T
Q  259 gcaggacgccaaatcgtggcgcgatcttggg-aaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggac 357  Q
    |||||    ||||||||| | |||| ||||| |||||||||||||||  |||||||||||| |||||||||||||| ||||||||||  | |||||||||    
T  15290241 gcaggggtgcaaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtagttccttgggac 15290340  T
Q  358 atacgtaaatcgtgacacgat 378  Q
      ||| |||||||||||||||    
T  15290341 ggacgcaaatcgtgacacgat 15290361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 160 - 378
Target Start/End: Original strand, 15470512 - 15470730
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gttt 258  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||||  | || |||||| || | ||    
T  15470512 tgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttc-ggatgccgtgagttagggtt 15470609  T
Q  259 gcaggacgccaaatcgtggcgcgatcttggg-aaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggac 357  Q
    |||||    ||||||||| | |||| ||||| |||||||||||||||  |||||||||||| |||||||||||||| ||||||||||  | |||||||||    
T  15470610 gcaggggtgcaaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtagttccttgggac 15470709  T
Q  358 atacgtaaatcgtgacacgat 378  Q
      ||| |||||||||||||||    
T  15470710 ggacgcaaatcgtgacacgat 15470730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 466 - 618
Target Start/End: Complemental strand, 7412666 - 7412517
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||  |||||||||||||   ||||||||||| ||||||||||    
T  7412666 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagagaggatctcttgggttgg--gaaacattgtaaacaccttgggt 7412569  T
Q  566 agtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctctt 618  Q
    ||||| || |||||||||| ||||||| |||||||||| || |||||||||||    
T  7412568 agtga-gatttcaccattgaaaggatcaaaagcttccttttatgtcttctctt 7412517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 466 - 629
Target Start/End: Complemental strand, 4456354 - 4456195
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||| ||||| |||  |||||||||||||   ||||||||||| ||||||||||    
T  4456354 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctctgtagtgaggatctcttgggttgg--gaaacattgtaaacaccttgggt 4456257  T
Q  566 agtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat 629  Q
    ||||| || ||||||||| |||||||| |||||||||| |||||||||||| ||||||||||||    
T  4456256 agtga-gatttcaccattagaaggatcaaaagcttccttttgtgtcttctc-tttagggttcat 4456195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 160 - 276
Target Start/End: Original strand, 31042908 - 31043024
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| |||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||  |||| |||||||| |||||    
T  31042908 tgttgagatttgacttcaaatttgtggtctggaagaatagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctggtttg 31043007  T
Q  260 caggacgccaaatcgtg 276  Q
    ||||  |||||||||||    
T  31043008 cagggtgccaaatcgtg 31043024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 223 - 436
Target Start/End: Original strand, 25689604 - 25689817
Alignment:
Q  223 atcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcatta 322  Q
    ||||||||||||||||  |||| |||||||||| |||||||  || |||||||||| ||||  ||||||||||| |||||||   ||||||||||| |||    
T  25689604 atcgtgacacgatttcg-ggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtcacacgatcgtgaaacttgctcgtta 25689702  T
Q  323 agtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtgacacga-tctggaaatcgtgacacgatttcctctgaggaagactagtattt 421  Q
    ||||||||||| ||||||||||| | ||||||    |||  |||||||||||||| |  | |||||||||||||||| |  | ||||||| |||||||||    
T  25689703 agtatccttgataaggactggtcgttccttggtttgtacacaaatcgtgacacgattgagaaaatcgtgacacgattgcaacagaggaaggctagtattt 25689802  T
Q  422 aagtgttcttgtgca 436  Q
    |||||||||||||||    
T  25689803 aagtgttcttgtgca 25689817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 160 - 435
Target Start/End: Complemental strand, 35745979 - 35745702
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gttt 258  Q
    |||||| | ||| ||||||||||||||| ||||||||||| | ||||||| | |||||| |  |||||||||||||   | | || ||||||| | ||||    
T  35745979 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcgga-gatgccgtgagccaagttt 35745881  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    |  ||| || |||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||  |||| |||||     
T  35745880 gttggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctatgataaggactggtc-aacctggggacc 35745782  T
Q  359 tacgtaaatcgtgacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
       | | |||||||||||||||  |||||||||| ||||||||| || | | | ||||||||||| ||||||||||||||    
T  35745781 gttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgc 35745702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 469 - 618
Target Start/End: Original strand, 19175528 - 19175674
Alignment:
Q  469 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagt 568  Q
    |||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||||| ||||   ||||||||||| |||||||||||||    
T  19175528 gagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttggattgg--gaaacattgtaaacaccttgggtagt 19175625  T
Q  569 gaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctctt 618  Q
    || || ||||| |||||||||||| |||| ||||| ||||||||||||||    
T  19175626 ga-gatttcactattggaaggatcaaaagtttccttttgtgtcttctctt 19175674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 466 - 618
Target Start/End: Original strand, 4696379 - 4696529
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||  |||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||| ||||||||||    
T  4696379 agagagagaaacttggattacaaaggagataactttagggttgagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaacaccttgggt 4696476  T
Q  566 agtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||| || ||||||||||||| ||||  |||||||||| |||||| |||||||    
T  4696477 agtga-gatttcaccattggaaagatcaaaaagcttccttttgtgttttctctt 4696529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 160 - 305
Target Start/End: Complemental strand, 7412952 - 7412807
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||      || |||||||| |||||    
T  7412952 tgttgaaatttgacttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattctgtaatgccgtgagctggtttg 7412853  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgatt 305  Q
    ||||  | ||||||||||  | || ||| |||||||||||||||||    
T  7412852 cagggtgtcaaatcgtggtacaattttgtgaaatcgtgacacgatt 7412807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 466 - 610
Target Start/End: Original strand, 5702251 - 5702393
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||||||||||   ||| ||||||| ||||||||||    
T  5702251 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgg--gaaatattgtaaacaccttgggt 5702348  T
Q  566 agtgaggagttcaccattggaaggatc-taaagcttcctcttgtgt 610  Q
    ||||| || ||||||||||||| ||||  |||||||||| ||||||    
T  5702349 agtga-gatttcaccattggaatgatcaaaaagcttccttttgtgt 5702393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 466 - 610
Target Start/End: Original strand, 23799347 - 23799489
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||  |||||||||||||    |||||||||| ||||||| ||    
T  23799347 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagagaggatctcttgggttgg--ggaacattgtaaacaccttgagt 23799444  T
Q  566 agtgaggagttcaccattggaaggatc-taaagcttcctcttgtgt 610  Q
    || || || ||||||||||||||||||  |||||||||| ||||||    
T  23799445 aggga-gatttcaccattggaaggatcaaaaagcttccttttgtgt 23799489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 464 - 618
Target Start/End: Original strand, 19752163 - 19752314
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    ||||||||||||||||||||  ||||||||| |||   |||||||||||||||||||| |||  ||||||||||||    ||| ||||||| ||||||||    
T  19752163 ttagagagagaaacttggatcgcaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttg--tgaaatattgtaaacaccttgg 19752260  T
Q  564 gtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||||| || |||| |||||||||||||  |||||||||| |||||| |||||||    
T  19752261 gtagtga-gatttcatcattggaaggatcaaaaagcttcct-ttgtgttttctctt 19752314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 486 - 565
Target Start/End: Original strand, 25328105 - 25328184
Alignment:
Q  486 caaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||| || | |||||| |||||||||  |||||||||||||||||||| ||||||||||||||||||||||||    
T  25328105 caaaggagggatcctatgggttgtgtgtctttgatgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 25328184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 25689558 - 25689618
Alignment:
Q  157 tattgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25689558 tattgttgagatt-gtcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 25689618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 364 - 437
Target Start/End: Original strand, 31043112 - 31043185
Alignment:
Q  364 aaatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||||||||||||||  ||||||||||||||||||||  || | |||||||||||||||||||||||||||||||    
T  31043112 aaatcgtgacacgacttggaaatcgtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcag 31043185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 502 - 618
Target Start/End: Original strand, 26403034 - 26403150
Alignment:
Q  502 agggttgagtgtctttgtagagagtgtctcttg--ggttggaaaaaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatc-taaagc 598  Q
    |||||||||||||||||||| |||  |||||||  |||||| |||  |||||||| ||||||||||||||| || ||||||||||||||||||  |||||    
T  26403034 agggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtga-gatttcaccattggaaggatcaaaaagc 26403130  T
Q  599 ttcctcttgtgtcttctctt 618  Q
    ||||| |||||| |||||||    
T  26403131 ttccttttgtgttttctctt 26403150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 290 - 396
Target Start/End: Original strand, 31043017 - 31043125
Alignment:
Q  290 aaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgta--aatcgtgacacgatctggaaatc 387  Q
    |||||||||||||||||  |||||||||| |||||| |||  || |||||| |||| ||||||| ||| ||||||  |||||||||||||  ||||||||    
T  31043017 aaatcgtgacacgattctcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacgtacgtaccaatcgtgacacgacttggaaatc 31043116  T
Q  388 gtgacacga 396  Q
    |||||||||    
T  31043117 gtgacacga 31043125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 506 - 592
Target Start/End: Original strand, 9054231 - 9054314
Alignment:
Q  506 ttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatc 592  Q
    |||||||| ||||||| |||  |||||||||||||||||  |||| ||||||||||||||||||| || ||||||||||||||||||    
T  9054231 ttgagtgtttttgtagtgagattctcttgggttggaaaa--cattataatcaccttgggtagtga-gatttcaccattggaaggatc 9054314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 10688630 - 10688675
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  10688630 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 10688675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 466 - 618
Target Start/End: Complemental strand, 3051447 - 3051296
Alignment:
Q  466 agagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttggg 564  Q
    |||||||||||||||| | || ||||||| ||||   |||||||||||||||||||| | |  ||||||| ||||| |||  |||||||| || ||||||    
T  3051447 agagagagaaacttgggactataaaggagagaactttagggttgagtgtctttgtagtggggttctcttgagttgggaaa--cattgtaaacatcttggg 3051350  T
Q  565 tagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    |||||| || ||||||||||||| ||||  |||||||||| |||||  |||||||    
T  3051349 tagtga-gatttcaccattggaaagatcaaaaagcttccttttgtgctttctctt 3051296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 5701964 - 5702009
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  5701964 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 5702009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 466 - 591
Target Start/End: Complemental strand, 28307889 - 28307766
Alignment:
Q  466 agagagagaaactt-ggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttggg 564  Q
    |||||||||||||| ||||||||||||||| |||   || |||||||||||||||||   |  |||||| ||||||   ||||||||| | |||||||||    
T  28307889 agagagagaaacttaggattacaaaggaggtaactttagagttgagtgtctttgtagcacggttctcttaggttgg--gaaacattgttaacaccttggg 28307792  T
Q  565 tagtgaggagttcaccattggaaggat 591  Q
    |||||| || ||||| |||||||||||    
T  28307791 tagtga-gatttcacaattggaaggat 28307766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 4456625 - 4456575
Alignment:
Q  168 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    |||| ||||||||||||||| ||||||||||  ||||||||||||||||||    
T  4456625 tttggcttcaaatttgtggtttggaagaacaaagaaatcgtgacacgattt 4456575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 502 - 618
Target Start/End: Complemental strand, 6127515 - 6127399
Alignment:
Q  502 agggttgagtgtctttgtagagagtgtctctt--gggttggaaaaaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatc-taaagc 598  Q
    |||||||||||||||||||| |||  ||||||  |||||||   ||||||||||| ||  ||||||||||| || ||||||||||||||||||  |||||    
T  6127515 agggttgagtgtctttgtagtgaggttctcttgagggttgg--gaaacattgtaaacattttgggtagtga-gatttcaccattggaaggatcaaaaagc 6127419  T
Q  599 ttcctcttgtgtcttctctt 618  Q
    || || |||||| |||||||    
T  6127418 tttcttttgtgttttctctt 6127399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 521 - 564
Target Start/End: Original strand, 39784685 - 39784728
Alignment:
Q  521 gagagtgtctcttgggttggaaaaaacattgtaatcaccttggg 564  Q
    ||||| ||||||| |||||| |||||||||||||||||||||||    
T  39784685 gagagagtctcttaggttgggaaaaacattgtaatcaccttggg 39784728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 11383406 - 11383440
Alignment:
Q  203 aatcgtgacacgattttggcatcgtgacacgattt 237  Q
    |||||||||||||||||||||||||| ||||||||    
T  11383406 aatcgtgacacgattttggcatcgtggcacgattt 11383440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 405 - 437
Target Start/End: Original strand, 15290369 - 15290401
Alignment:
Q  405 gaggaagactagtatttaagtgttcttgtgcag 437  Q
    |||||||||||||| ||||||||||||||||||    
T  15290369 gaggaagactagtacttaagtgttcttgtgcag 15290401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 405 - 437
Target Start/End: Original strand, 15470738 - 15470770
Alignment:
Q  405 gaggaagactagtatttaagtgttcttgtgcag 437  Q
    |||||||||||||| ||||||||||||||||||    
T  15470738 gaggaagactagtacttaagtgttcttgtgcag 15470770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 23799105 - 23799149
Alignment:
Q  174 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    |||||||||||||| || |||||||| |||||||| |||||||||    
T  23799105 ttcaaatttgtggtttgaaagaacagagaaatcgtaacacgattt 23799149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 301; Significance: 1e-169; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 173 - 632
Target Start/End: Complemental strand, 2058592 - 2058132
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||    
T  2058592 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttga-ggtgccgtgagctagtttgcaggacgccaaat 2058494  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||   |||| |||||||||    
T  2058493 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtga 2058394  T
Q  373 cacgatctggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgcagnnnnnnnagagagagcttggaagagcttagagag 471  Q
    |||||||||||||||||| ||||||| | || ||||||| ||||||| ||  ||||||||||||||       | |||||||||||||||||||||||||    
T  2058393 cacgatctggaaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgcagatttgaaa-agagagcttggaagagcttagagag 2058295  T
Q  472 agaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgag 571  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2058294 ag-aacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 2058196  T
Q  572 gagttcaccatt---ggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    |||||||  | |   || ||||||||||||||||||| ||||||||||||||||||||||||||    
T  2058195 gagttcattagttgggggaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 2058132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 204 - 632
Target Start/End: Original strand, 1532947 - 1533374
Alignment:
Q  204 atcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacga 303  Q
    |||||||||||| ||||||||||||||| |||||  ||||| | ||||||||||||||||  ||||||||||| | ||||||||||||||||||||||||    
T  1532947 atcgtgacacgaatttggcatcgtgacatgattttgaggtgccatgagctagtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacga 1533046  T
Q  304 ttcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtgacacgatctggaaatcgtgacacgatttcctc 403  Q
    ||  ||||||| ||| |||||||||||||| ||||||||||  |||||||||||||||  ||||||||||||||||||||||||||| ||||||| | ||    
T  1533047 ttgtgaaacttactcgttaagtatccttgataaggactggttataccttgggacatacacaaatcgtgacacgatctggaaatcgtggcacgattgcttc 1533146  T
Q  404 tgaggaagactagtattta-agtgttcttgtgcagnnnnnnnagagagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaa 502  Q
     ||||||| ||||||| || ||||||||||| |||       || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1533147 agaggaaggctagtatatatagtgttcttgtacagatttg--agggagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaa 1533244  T
Q  503 gggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatctaaagcttcc 602  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1533245 gggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatctaaagcttcc 1533344  T
Q  603 tcttgtgtcttctcttttagggttcatatt 632  Q
    ||| ||||||||||||||||||||||||||    
T  1533345 tctagtgtcttctcttttagggttcatatt 1533374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 160 - 632
Target Start/End: Complemental strand, 21646643 - 21646171
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||| | ||||||||||||||||||||||  | || |||||||| |||||    
T  21646643 tgttgacatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 21646544  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||||| | ||||||||| ||||||||||||||||   |||||||||| |||||||||||||| ||| ||||||| ||||||||||| |    
T  21646543 cagggtgccaaatcgtgacacgatcttggaaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataagaactggtcataccttgggacgt 21646444  T
Q  360 acgt--aaatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttgg 457  Q
    ||||  |||||||| |||||||||||||||||||||||||||  || ||||||| |||||||||||||||||||||||||        || |||||||||    
T  21646443 acgttcaaatcgtgccacgatctggaaatcgtgacacgattttatcagaggaaggctagtatttaagtgttcttgtgcagattttgggga-agagcttgg 21646345  T
Q  458 aagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatca 557  Q
    |||||||||||||||||||||| |||||||||||||| |||   ||||||||||||||||||||||||  ||||||||||||| ||||||||||||| ||    
T  21646344 aagagcttagagagagaaacttagattacaaaggaggaaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaaaca 21646245  T
Q  558 ccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    ||||||||||||| || |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  21646244 ccttgggtagtga-gatttcaccattggaaggatctaaatcttcctctagtgtcttctcttttagggttcatatt 21646171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 160 - 632
Target Start/End: Complemental strand, 18414275 - 18413804
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| |||||||||| |||||||||||||||| ||||||||||||||| |||||||||||| ||||||||   |||| |||||||| |||||    
T  18414275 tgttgagatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattttgtggtgccgtgagctggtttg 18414176  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    |||| |||||||||||| | ||||||||||||||||| |||||||||  |||||||||  |||||| ||| ||| ||||||||||| ||||||| ||| |    
T  18414175 cagggcgccaaatcgtgacacgatcttgggaaatcgtaacacgattctcaaacttgcttgttaagtttccatgataaggactggtcgtaccttgtgacgt 18414076  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttgg 457  Q
    |||||  |||||||||||||  ||||||||||||||| ||||  ||   |||||||||||||||||||||||||||||||       || ||||||||||    
T  18414075 acgtaccaatcgtgacacgacttggaaatcgtgacacaattttatcattggaagactagtatttaagtgttcttgtgcagattttggag-gagagcttgg 18413977  T
Q  458 aagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatca 557  Q
    |||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||| |||  ||||||||||||| ||||||| ||||| ||    
T  18413976 aagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaaaacaatgtaaaca 18413877  T
Q  558 ccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    ||||||||||||| || ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  18413876 ccttgggtagtga-gatttcaccattggaaggatcttaagcttcctcttgtgtcttc-cttttagggttcatatt 18413804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 160 - 632
Target Start/End: Complemental strand, 18409399 - 18408928
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| ||||||||||||| ||||||||||||| |||||||| |||||| |||||||||||||||||||||   |||| |||||||| |||||    
T  18409399 tgttgagatttggcttcaaatttgtgttctggaagaacagagaaatcgtaacacgaatttggcatcgtgacacgattttgtggtgccgtgagctggtttg 18409300  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  |||||||| || | |||||||| ||||||||||||||||||  |||||||||  |||||| ||| ||| ||||||||||| ||||||| ||| |    
T  18409299 cagggtgccaaatcatgacacgatcttgagaaatcgtgacacgattctcaaacttgcttgttaagtttccatgataaggactggtcgtaccttgtgacgt 18409200  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttgg 457  Q
    |||||  |||||||||||||  ||||||||||||||||||||  || | |||||||||||||||||||||||| ||||||       || ||||||||||    
T  18409199 acgtaccaatcgtgacacgacttggaaatcgtgacacgattttatcagtggaagactagtatttaagtgttctcgtgcagattttggag-gagagcttgg 18409101  T
Q  458 aagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatca 557  Q
    |||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||||| |||  ||||||||||||| ||||||||||||| ||    
T  18409100 aagagcttagagagagaaacttagattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaaca 18409001  T
Q  558 ccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    ||||||||||||| || |||||||||  |||||||| |||||||||||||||||||| |||||||||||||||||    
T  18409000 ccttgggtagtga-gatttcaccattaaaaggatcttaagcttcctcttgtgtcttc-cttttagggttcatatt 18408928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 173 - 563
Target Start/End: Complemental strand, 4873709 - 4873310
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  | ||| || ||||||||||||||||||||    
T  4873709 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtaagatagtttgcaggacgccaaat 4873610  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| |||||||||||||||||||||| |||||||||||||||| |||||||||  ||| ||||||| ||||| ||||||| |    | |||||||||    
T  4873609 cgtggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaagtatcactgataaggacttgtctt-ccttgggtccgttgcaaatcgtga 4873511  T
Q  373 cacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgc--------agnnnnnnnagagagagcttggaaga 461  Q
    ||||||||  |||||||||| ||||||||| || ||||||||||||||| ||  ||||||||||||        ||         |||||||||||||||    
T  4873510 cacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaagaagaacttaagagagcttggaaga 4873411  T
Q  462 gcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcacctt 561  Q
    |||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  4873410 gcttagagagag-aacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacctt 4873312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 160 - 436
Target Start/End: Original strand, 24789426 - 24789703
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||| ||||||||||||||    
T  24789426 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtttg 24789525  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||||||| ||||||||||||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||| |||||||||   |    
T  24789526 cagggtgccaaatcgtggcacgatcttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgt 24789625  T
Q  360 acgtaaatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtat-ttaagtgttcttgtgca 436  Q
    ||| ||||| ||||||||| ||||||||||||||||||| | || ||||||| ||||||| | |||||||||||||||    
T  24789626 acgcaaatcttgacacgatttggaaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgca 24789703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 173 - 565
Target Start/End: Original strand, 24023831 - 24024232
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||  |  | ||||||||||||||||||||||||    
T  24023831 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattgtggcatcgtggcacgatttcaagtggcagagagctagtttgcaggacgccaaat 24023930  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||  |||| |||||    | | |||||||    
T  24023931 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtc-aacctggggaccgttgcagatcgtga 24024029  T
Q  373 cacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgc--------ag--nnnnnnnagagagagcttggaag 460  Q
    ||||||||  |||||||||| ||||||||| || | ||||||||||||| | |||||||||||||        ||         |||||||||||| | |    
T  24024030 cacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatat-agtgttcttgtgcttttttgaagtaagacataagagagagcttgtatg 24024128  T
Q  461 agcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcacct 560  Q
    ||||| ||||||| |||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||     
T  24024129 agctttgagagag-aacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttggaaaaacattgtaatcaccg 24024227  T
Q  561 tgggt 565  Q
    |||||    
T  24024228 tgggt 24024232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 173 - 378
Target Start/End: Original strand, 20357040 - 20357245
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20357040 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgccaaat 20357139  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||| ||||  |||||||| || ||| ||||||||     
T  20357140 cgtggcacgatcttgggaaatcgtgacatgattcagaaacttgctcgttaagtatccttgataaggaccggtcaaaccttgggtcagacgcaaatcgtgg 20357239  T
Q  373 cacgat 378  Q
    ||||||    
T  20357240 cacgat 20357245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 173 - 378
Target Start/End: Complemental strand, 21640411 - 21640206
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  21640411 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaat 21640312  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||| | |||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||| | |||||| ||  ||| |||||||||    
T  21640311 cgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtcatgccttggaacggacgcaaatcgtga 21640212  T
Q  373 cacgat 378  Q
    ||||||    
T  21640211 cacgat 21640206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 173 - 565
Target Start/End: Original strand, 31109082 - 31109489
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtc-gtgagcta-gtttgcaggacgccaa 270  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||| || | || ||||| ||||||||||||||||    
T  31109082 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttcaag-tgcctgtaagctaagtttgcaggacgccaa 31109180  T
Q  271 atcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgt 370  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||   ||| ||||||| ||||  ||||||| |    | | |||||    
T  31109181 atcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtataactgataaggacttgtctg-ccttggggccgttgcagatcgt 31109279  T
Q  371 gacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtatttaa-gtgttcttgtgc----------agnnnnnnnagagagagcttgg 457  Q
    ||||||||||  |||||||||| ||||||||| || ||||||||||||||| ||  ||||||||||||          |        ||||||||||||     
T  31109280 gacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaagataaacttaagagagagcttgt 31109379  T
Q  458 aagagctta-gagagagaaacttggattacaaaggagggaaccaaa-gggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaat 555  Q
    | ||||||| |||||| ||||||||||  ||||||||||||||| | ||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  31109380 atgagcttaagagagaaaaacttggatagcaaaggagggaaccatatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaat 31109479  T
Q  556 caccttgggt 565  Q
    ||||||||||    
T  31109480 caccttgggt 31109489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 173 - 419
Target Start/End: Complemental strand, 12406845 - 12406598
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||| ||||||||||    
T  12406845 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgcaagacgccaaat 12406746  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||  ||| ||||||| ||| ||||||||| |    | |||||||||    
T  12406745 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccgttgcaaatcgtga 12406647  T
Q  373 cacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtat 419  Q
    |||||| |  |||||||||| ||||||||| || |||||||||||||||    
T  12406646 cacgatttggggaaatcgtggcacgatttcttcagaggaagactagtat 12406598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 448 - 632
Target Start/End: Complemental strand, 21640156 - 21639973
Alignment:
Q  448 gagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaac 547  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||  ||||||||||||| ||||||    
T  21640156 gagagcttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaaaac 21640057  T
Q  548 attgtaatcaccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    ||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21640056 attgtaaacaccttgggtagtga-gatttcaccattggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 21639973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 448 - 632
Target Start/End: Original strand, 20357294 - 20357478
Alignment:
Q  448 gagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaac 547  Q
    |||||||||| ||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  20357294 gagagcttggtagagcttagtgagagaa-cttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 20357392  T
Q  548 attgtaatcaccttgggtagtgaggagttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    |||||||||||||||||||||||||||||||  | |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20357393 attgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 20357478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 160 - 397
Target Start/End: Original strand, 39730933 - 39731172
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||   | || |||||||| |||||    
T  39730933 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 39731032  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||||| | |||||||| | |||||||||||||||   |||||||||| |||||| ||| ||| ||||||||||| ||||||||||| |    
T  39731033 cagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacgt 39731132  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgat 397  Q
    |||||  |||||||||||||||||||||||||||||||||    
T  39731133 acgtaccaatcgtgacacgatctggaaatcgtgacacgat 39731172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 160 - 437
Target Start/End: Complemental strand, 6592921 - 6592644
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-tt 258  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  | || ||||||||||  ||    
T  6592921 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcg-gatgccgtgagctagggtt 6592824  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    |||||    ||||||||||| |||| | || ||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||| | |||||||||     
T  6592823 gcaggggtgcaaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 6592724  T
Q  359 tacgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
     ||| |||||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  6592723 gacgcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 6592644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 173 - 565
Target Start/End: Complemental strand, 12397480 - 12397091
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||  | |||||||||||||||||| |     ||    
T  12397480 cttcaaatttgtggtctggaagaacagagaaatcgcgacacgattttggtatcgtgacacgatttcaagtggccgtgagctagtttgcaggcc-----at 12397386  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
            |||||||||||||||||||||||||||||||||||||| |||||||||  ||| ||||||| |||| |||||||| |    | |||||||||    
T  12397385 --------gatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtct-accttgggtccgttgcaaatcgtga 12397295  T
Q  373 cacgatctgg--aaatcgtgacacgatttcctctgaggaagactagtatttaa-gtgttcttgtgcagnnnnnnnaga---------gagagcttggaag 460  Q
    |||||| |||  |||||||| ||||||||| || |||||| |||||||| ||  ||||||||||||         |||         ||||||||| | |    
T  12397294 cacgatttggggaaatcgtggcacgatttcttcagaggaatactagtatatattgtgttcttgtgccttttttgaagaagaacttaagagagcttgtatg 12397195  T
Q  461 agcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcacct 560  Q
    ||||||||||||||| |||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  12397194 agcttagagagagaa-cttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacct 12397096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 159 - 437
Target Start/End: Complemental strand, 6595138 - 6594860
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-t 257  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||  | || ||||||||||  |    
T  6595138 ttgttgagatt-gtcttcaaatttgtggtctggaaaaacagggaaatcgtgacacgattttgggatcgtgacacgatttcg-gatgccgtgagctagggt 6595041  T
Q  258 tgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggac 357  Q
    ||||||    ||||||||||| |||| | || ||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||| | |||||||||    
T  6595040 tgcaggggtgcaaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 6594941  T
Q  358 atacgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
      ||| |||||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  6594940 ggacgcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 6594860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 160 - 358
Target Start/End: Complemental strand, 43504721 - 43504523
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  | || |||||||| |||||    
T  43504721 tgttgagatttagcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 43504622  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    ||||  ||||||||||| | ||||| ||||||||||||||||||||   |||||||||| |||||| ||| ||| ||||||||||| ||||||||||||    
T  43504621 cagggtgccaaatcgtgacacgatcgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggaca 43504523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 160 - 629
Target Start/End: Complemental strand, 2479960 - 2479503
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||| ||||| ||||||||||||||| || |||||||| ||||| |||||||||||||||||||||||||||||||     || |||||||| |||||    
T  2479960 tgttgaaatttggcttcaaatttgtggtttgtaagaacagagaaattgtgacacgattttggcatcgtgacacgattttctaatgccgtgagctggtttg 2479861  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  | ||||||||| | |||| ||| |||||||| ||||||||   ||||||| |  |||||| | |  || ||||  ||||| ||||||||| | |    
T  2479860 cagggtgtcaaatcgtgtcacgattttgtgaaatcgttacacgattttcaaacttgttggttaagttttcaggataaggt-tggtcgtaccttgggtcgt 2479762  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttgg 457  Q
    ||| |  |||| || || ||| |||||| |||| ||||||||  || |  |||||||||||| |||||||||||||||||       ||| ||||||||     
T  2479761 acgcatcaatcatggcatgatttggaaaacgtggcacgattttatcagttgaagactagtatataagtgttcttgtgcagattttggaga-agagcttga 2479663  T
Q  458 aagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatca 557  Q
    |        ||||||||||||||||||||||||||||||||   |||||||||||||||| ||| |||  |||||||||||||   ||||||||||| ||    
T  2479662 a--------gagagagaaacttggattacaaaggagggaactttagggttgagtgtctttatagtgaggatctcttgggttgg--gaaacattgtaaaca 2479573  T
Q  558 ccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat 629  Q
    ||||||||||||| || |||||||||||||||||| |||||||||| || | ||||||| ||||||||||||    
T  2479572 ccttgggtagtga-gatttcaccattggaaggatcaaaagcttccttttatatcttctc-tttagggttcat 2479503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 160 - 437
Target Start/End: Complemental strand, 18392780 - 18392503
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gttt 258  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||| ||  ||||| ||||||||| | ||    
T  18392780 tgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgccgtgagctagggtt 18392683  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    |||||  || || ||||| | |||| | || |||||||||||||||   ||||||||||| |||||||||||||| ||||||||||| | |||||||||     
T  18392682 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 18392583  T
Q  359 tacgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
     ||| |||||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  18392582 gacgcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 18392503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 159 - 378
Target Start/End: Complemental strand, 32060889 - 32060671
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gtt 257  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  | || ||||||||| | |    
T  32060889 ttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc-ggatgccgtgagctagggt 32060792  T
Q  258 tgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggac 357  Q
    ||||||    ||||||||||| |||| | || |||||||||||||||  |||||||||||| |||||||||||||| ||||||||||| | |||||||||    
T  32060791 tgcaggggtgcaaatcgtggcacgatttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 32060692  T
Q  358 atacgtaaatcgtgacacgat 378  Q
      ||| |||||||||||||||    
T  32060691 ggacgcaaatcgtgacacgat 32060671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 160 - 378
Target Start/End: Original strand, 20343500 - 20343717
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||  |||| |||||||||| |||    
T  20343500 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacgcgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttg 20343598  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    | ||| || |||||||| | ||||  |||||||||||||||||||   ||||||||||| |||||||||||||| ||||||||||| |  ||||||   |    
T  20343599 ccggatgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggt 20343698  T
Q  360 acgtaaatcgtgacacgat 378  Q
    ||| | |||||||||||||    
T  20343699 acgcagatcgtgacacgat 20343717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 157 - 437
Target Start/End: Complemental strand, 25767543 - 25767267
Alignment:
Q  157 tattgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt 256  Q
    ||||||||| ||||| |||||||||||||||||||||       ||||||||||||| | ||||||||||||||||||||||  | || |||||||| ||    
T  25767543 tattgttgatatttggcttcaaatttgtggtctggaaa------gaaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgagctggt 25767450  T
Q  257 ttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttggga 356  Q
    |||||||  ||||||||||| | |||| |||||||||||||||||||||   |||||||||| |||||| ||   || |||||| |||| | ||||| ||    
T  25767449 ttgcagggtgccaaatcgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagtttctaggataaggacaggtcgtgccttgtga 25767350  T
Q  357 catacgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    | ||||||  |||||||||||||  ||||||||||||||||||||  ||   |||||||||||||||||||||||||||||||    
T  25767349 cgtacgtaccaatcgtgacacgacttggaaatcgtgacacgattttatcaatggaagactagtatttaagtgttcttgtgcag 25767267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 159 - 378
Target Start/End: Original strand, 48408397 - 48408618
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagttt 258  Q
    ||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||   | || |||||||| ||||    
T  48408397 ttgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggttt 48408496  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    |||||  ||||||||||| | |||||||| |||||||||||||||||   |||||||||| |||||| ||   || ||||||||||| |||||||  ||     
T  48408497 gcagggtgccaaatcgtgacacgatcttgagaaatcgtgacacgatttgcaaacttgctcgttaagtttctaggataaggactggtcgtaccttgtaacg 48408596  T
Q  359 tacgta--aatcgtgacacgat 378  Q
    ||||||  ||||||||||||||    
T  48408597 tacgtaccaatcgtgacacgat 48408618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 156 - 437
Target Start/End: Complemental strand, 1562591 - 1562310
Alignment:
Q  156 ttattgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctag 255  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  | |    |    | |    
T  1562591 ttattgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgtgtttctttttttttg 1562493  T
Q  256 tttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttggg 355  Q
    |||   ||     |||||||| | |||| |||| |||||||||||||||   ||||||||||| |||||||||||||| ||||||||||| | ||||| |    
T  1562492 ttttttgggttttaaatcgtgtcacgattttggtaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgtg 1562393  T
Q  356 acatacgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||  ||| |||||||||||||||  || ||||||||||||||||    | |||||||||||||||||| ||||||||||||||    
T  1562392 acggacgcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtatttatgtgttcttgtgcag 1562310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 167 - 345
Target Start/End: Original strand, 21811745 - 21811923
Alignment:
Q  167 atttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gtttgcaggac 265  Q
    ||||| ||||||||||||||||||||||||||| | ||||||| |||||||||| |||||||||||||| | | | || ||||||| | |||||||||      
T  21811745 atttggcttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgccatcgtgacacgatctga-gatgccgtgagcaatgtttgcagggt 21811843  T
Q  266 gccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtc 345  Q
    || |||||||||| ||||||||||||||||||||||||| ||||||||||||  |||||||||  ||| |||||||||||    
T  21811844 gcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctagttaagtatctctgataaggactggtc 21811923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 173 - 435
Target Start/End: Complemental strand, 16880648 - 16880384
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtc-gtgagc-tagtttgcaggacgccaa 270  Q
    ||||||||| ||||| ||||||| ||| | ||||||| |||||||||| ||||||||||||||  || || | | |||||| |||||||| ||| || ||    
T  16880648 cttcaaattagtggtttggaagagcagaggaatcgtgtcacgattttgccatcgtgacacgat--cagggaggcagtgagcctagtttgctggaagcaaa 16880551  T
Q  271 atcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgt 370  Q
    |||||| | |||||||||||||| |||||||||||||||||||||||  |||||| ||  ||| |||||||||||  |||| |||||    | | |||||    
T  16880550 atcgtgtcacgatcttgggaaattgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtc-aacctggggaccgttgcagatcgt 16880452  T
Q  371 gacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
    ||||||||||  |||||||||| ||||||||| |||| | | ||||||||||| ||||||||||||||    
T  16880451 gacacgatctagggaaatcgtggcacgatttcttctgggcaggactagtatttaaagtgttcttgtgc 16880384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 173 - 435
Target Start/End: Complemental strand, 16885503 - 16885239
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtc-gtgagc-tagtttgcaggacgccaa 270  Q
    ||||||||| ||||| ||||||| ||| | ||||||| |||||||||| ||||||||||||||  || || | | |||||| |||||||| ||| || ||    
T  16885503 cttcaaattagtggtttggaagagcagaggaatcgtgtcacgattttgccatcgtgacacgat--cagggaggcagtgagcctagtttgctggaagcaaa 16885406  T
Q  271 atcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgt 370  Q
    |||||| | |||||||||||||| |||||||||||||||||||||||  |||||| ||  ||| |||||||||||  |||| |||||    | | |||||    
T  16885405 atcgtgtcacgatcttgggaaattgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtc-aacctggggaccgttgcagatcgt 16885307  T
Q  371 gacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
    ||||||||||  |||||||||| ||||||||| |||| | | ||||||||||| ||||||||||||||    
T  16885306 gacacgatctagggaaatcgtggcacgatttcttctgggcaggactagtatttaaagtgttcttgtgc 16885239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 460 - 618
Target Start/End: Original strand, 46516070 - 46516226
Alignment:
Q  460 gagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcacc 559  Q
    ||||||||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  ||||||| |||||   ||||||||||| ||||    
T  46516070 gagcttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgagttgg--gaaacattgtaaacacc 46516167  T
Q  560 ttgggtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||||||||| || ||||||||||||||||||  |||||||| | |||||| |||||||    
T  46516168 ttgggtagtga-gatttcaccattggaaggatcaaaaagcttcattttgtgttttctctt 46516226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 466 - 629
Target Start/End: Complemental strand, 47263992 - 47263833
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    |||||||||||||||||||| |||||||| |||   |||||||||||||||||||| |||  |||||| ||||||   |||||||||||  |||||||||    
T  47263992 agagagagaaacttggattataaaggaggtaactttagggttgagtgtctttgtagtgagaatctcttcggttgg--gaaacattgtaaataccttgggt 47263895  T
Q  566 agtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat 629  Q
    ||||| || |||||||||||||||||| |||||||||| |||||||||||  ||||||||||||    
T  47263894 agtga-gatttcaccattggaaggatcaaaagcttccttttgtgtcttct-atttagggttcat 47263833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 466 - 618
Target Start/End: Complemental strand, 20284415 - 20284265
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    |||||||||||||||||||| |||||||| |||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||| ||||||||||    
T  20284415 agagagagaaacttggattataaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgg--gaaacattgtaaacaccttgggt 20284318  T
Q  566 agtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||| || ||||||||||||||||||  |||||||||| |||||| |||||||    
T  20284317 agtga-gatttcaccattggaaggatcaaaaagcttccttttgtgttttctctt 20284265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 466 - 618
Target Start/End: Original strand, 23402784 - 23402934
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||| ||||||||||    
T  23402784 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgg--gaaacattgtaaacaccttgggt 23402881  T
Q  566 agtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||| || ||||||||||||| ||||  |||||||||| |||||| |||||||    
T  23402882 agtga-gatttcaccattggaatgatcaaaaagcttccttttgtgttttctctt 23402934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 173 - 435
Target Start/End: Original strand, 24265689 - 24265953
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtc-gtgagcta-gtttgcaggacgccaa 270  Q
    ||||||||| ||||| ||| ||||||| | ||||||| ||||||||||   ||||||||||||  || || | | |||||||| |||||| ||| || ||    
T  24265689 cttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgat--cagggaggcagtgagctaagtttgctggaagcaaa 24265786  T
Q  271 atcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgt 370  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||  || | |||||    | | |||||    
T  24265787 atcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacttggggaccgttgcagatcgt 24265885  T
Q  371 gacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
    ||||||||||  |||||||||| |||||||||||| |   | ||||||||||| ||||||||||||||    
T  24265886 gacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgc 24265953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 290 - 437
Target Start/End: Complemental strand, 18389215 - 18389067
Alignment:
Q  290 aaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtgacacgatctgg-aaatcg 388  Q
    |||||||||||||||   ||||||||||| |||||||||||||| ||||||||||| | |||||||||  ||| |||||||||||||||  || ||||||    
T  18389215 aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgattgggaaaatcg 18389116  T
Q  389 tgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||||||||||    | |||||||||||||| ||||||||||||||||||    
T  18389115 tgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 18389067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 160 - 432
Target Start/End: Complemental strand, 47264267 - 47263994
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||| ||||| ||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||     ||||||||||| |||||    
T  47264267 tgttgaaatttggcttcaaatttgtggtttggaagaatagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgtcgtgagctggtttg 47264168  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
     |||  | ||||||||||| | ||  || |||||||||||||||||   |||||||||  |||||| | |  || ||||  ||||| || |||||| | |    
T  47264167 tagggtgtcaaatcgtggcacaattgtgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggtcgtatcttgggtcgt 47264069  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttg 432  Q
    |||||  |||| ||||||||| |||||| |||| ||||||||  || |  |||||||  ||| ||||||||||||    
T  47264068 acgtatcaatcttgacacgatttggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttg 47263994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 464 - 618
Target Start/End: Complemental strand, 2580717 - 2580566
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    ||||||||||||||||||||| ||||||||| |||   |||||||||||||||||| | |||  |||||||||||||  |||||||||||| ||||||||    
T  2580717 ttagagagagaaacttggattgcaaaggaggtaactttagggttgagtgtctttgt-gtgaggttctcttgggttgg--aaaacattgtaaacaccttgg 2580621  T
Q  564 gtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||||| || |||||||||| |||||||  |||||||||| |||||| |||||||    
T  2580620 gtagtga-gatttcaccattgaaaggatcaaaaagcttccttttgtgttttctctt 2580566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 469 - 632
Target Start/End: Complemental strand, 21989231 - 21989072
Alignment:
Q  469 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagt 568  Q
    |||||||||||||||||||||||||| |||   ||| |||||||||||||||| |||  |||||||||||||   ||||||||||| |||||||||||||    
T  21989231 gagagaaacttggattacaaaggaggtaactttaggtttgagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaacaccttgggtagt 21989134  T
Q  569 gaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    || || || |||||||||||||||  ||||||||| |  ||| ||||| |||||||||||||||    
T  21989133 ga-gattttaccattggaaggatcataagcttcctttattgttttctc-tttagggttcatatt 21989072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 469 - 618
Target Start/End: Original strand, 4796443 - 4796589
Alignment:
Q  469 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagt 568  Q
    |||||||||||||||||||||||||| |||   ||| |||||||||||||||| |||  |||||||||||||  |||||||||||| |||||||||||||    
T  4796443 gagagaaacttggattacaaaggaggtaactttagg-ttgagtgtctttgtagtgaggatctcttgggttgg--aaaacattgtaaacaccttgggtagt 4796539  T
Q  569 gaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    || || ||||||||||||||||||  |||||||| | |||||| |||||||    
T  4796540 ga-gatttcaccattggaaggatcaaaaagcttctttttgtgttttctctt 4796589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 491 - 563
Target Start/End: Complemental strand, 12406585 - 12406513
Alignment:
Q  491 gagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  12406585 gagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 12406513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 44847617 - 44847737
Alignment:
Q  158 attgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtt 257  Q
    |||||||| ||||| ||||||||||||||| |  |||||||| |||||||||||||||||||||||||||||||||||||     ||||||||||| |||    
T  44847617 attgttgaaatttggcttcaaatttgtggtttaaaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgtcgtgagctggtt 44847716  T
Q  258 tgcaggacgccaaatcgtggc 278  Q
    ||||||| | || ||||||||    
T  44847717 tgcaggatgtcagatcgtggc 44847737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 1532884 - 1532958
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacga 234  Q
    |||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  1532884 tgttgatatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacga 1532958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 464 - 592
Target Start/End: Original strand, 2647466 - 2647591
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    ||||||||||||||||||| ||||||||||  |||   |||||||||||||||||||| |||  |||||||||||||   |||||| |||| ||||||||    
T  2647466 ttagagagagaaacttggactacaaaggagataactttagggttgagtgtctttgtagtgaggatctcttgggttgg--gaaacatggtaagcaccttgg 2647563  T
Q  564 gtagtgaggagttcaccattggaaggatc 592  Q
    ||||||| || ||||||||||||||||||    
T  2647564 gtagtga-gatttcaccattggaaggatc 2647591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 466 - 588
Target Start/End: Original strand, 44847896 - 44848015
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    |||||||||||||||||||| |||||||| |||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||| |||||||| |    
T  44847896 agagagagaaacttggattataaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaacaccttggat 44847993  T
Q  566 agtgaggagttcaccattggaag 588  Q
    ||||| || ||||||||||||||    
T  44847994 agtga-gatttcaccattggaag 44848015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 159 - 305
Target Start/End: Complemental strand, 21989532 - 21989387
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagttt 258  Q
    ||||||| | ||| ||||||||||||||| ||||||||||| |||||||||||| |||||   ||||||||||||||||     ||||||||||| ||||    
T  21989532 ttgttgaaagttggcttcaaatttgtggtttggaagaacagagaaatcgtgacaagatttcatcatcgtgacacgattttgcaatgtcgtgagctggttt 21989433  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgatt 305  Q
    ||||| || | ||||||||| |||| ||| |||| ||||||||||||    
T  21989432 gcagggcgaccaatcgtggcacgattttgtgaaa-cgtgacacgatt 21989387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 466 - 618
Target Start/End: Original strand, 33332221 - 33332371
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||| ||||||||||||||||||||||| |||   |||||||||||| |||||||  ||  ||||||||||||  | ||||||||||| || |||||||    
T  33332221 agagatagaaacttggattacaaaggaggtaactttagggttgagtgtttttgtagtaaggttctcttgggttg--agaaacattgtaaacatcttgggt 33332318  T
Q  566 agtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||| || ||||||||||||||||||  |||||||||  |||||| |||||||    
T  33332319 agtga-gatttcaccattggaaggatcaaaaagcttccctttgtgttttctctt 33332371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 464 - 618
Target Start/End: Original strand, 9189775 - 9189928
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtg-tctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttg 562  Q
    ||||||||||||||||||||| ||||||||  |||   ||||||||||| |||||||||  ||  |||||||||||||   ||||||||||| |||||||    
T  9189775 ttagagagagaaacttggattgcaaaggagataactttagggttgagtgttctttgtagtaaggttctcttgggttgg--gaaacattgtaaacaccttg 9189872  T
Q  563 ggtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    |||||||| || ||||||||||||||||||  ||||||||||  ||||| |||||||    
T  9189873 ggtagtga-gatttcaccattggaaggatcaaaaagcttccttgtgtgttttctctt 9189928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 464 - 618
Target Start/End: Original strand, 9184943 - 9185095
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    |||||||||||||| | |||| ||||||||| |||   |||||||||| |||||||||  ||  |||||||||||||   ||||||||||| ||||||||    
T  9184943 ttagagagagaaacattgattgcaaaggaggtaactttagggttgagtatctttgtagtaaggttctcttgggttgg--gaaacattgtaaacaccttgg 9185040  T
Q  564 gtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||||| || ||||||||||||||||||  ||||||||||  ||||| |||||||    
T  9185041 gtagtga-gatttcaccattggaaggatcaaaaagcttccttgtgtgttttctctt 9185095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 269 - 435
Target Start/End: Original strand, 24260929 - 24261097
Alignment:
Q  269 aaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttg-ggacatacgtaaat 367  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||  | |||| ||||    | ||||    
T  24260929 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc--aacttgaggaccgttgaaaat 24261026  T
Q  368 cgtgacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
    |||||||||||||  |||||||||| ||||||||| || |   | ||||||||||| ||||||||||||||    
T  24261027 cgtgacacgatctagggaaatcgtggcacgatttcatcaggacaggactagtatttaaagtgttcttgtgc 24261097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 466 - 610
Target Start/End: Complemental strand, 3047581 - 3047438
Alignment:
Q  466 agagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttggg 564  Q
    |||||||||||||||| ||||||||||||| |||   |||||||||||||||||||| |||  |||||||||||||   ||||| | |||||| ||||||    
T  3047581 agagagagaaacttgggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgg--gaaacactataatcatcttggg 3047484  T
Q  565 tagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgt 610  Q
    |||||| || |||| |||||||||||||  |||||||||| ||||||    
T  3047483 tagtga-gatttcatcattggaaggatcaaaaagcttccttttgtgt 3047438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 160 - 305
Target Start/End: Complemental strand, 21983867 - 21983722
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||| | ||| ||||||||||||||| ||||||||||| ||||||||||||||||||   ||||||||||||||||     ||||||||||| |||||    
T  21983867 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttcatcatcgtgacacgattttgcaatgtcgtgagctggtttg 21983768  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgatt 305  Q
    ||||  | | ||||| |||  ||| ||| |||| ||||||||||||    
T  21983767 cagggtgaccaatcgcggcatgattttgtgaaaacgtgacacgatt 21983722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 544 - 632
Target Start/End: Complemental strand, 21983536 - 21983450
Alignment:
Q  544 aaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    ||||||||||| |||||||||||||||| | ||||||||||||||||||  ||||||||| |||||| ||||| |||||||||||||||    
T  21983536 aaacattgtaaacaccttgggtagtgag-atttcaccattggaaggatcataagcttccttttgtgttttctc-tttagggttcatatt 21983450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 459 - 618
Target Start/End: Complemental strand, 29160141 - 29159981
Alignment:
Q  459 agagcttagagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttggaaaaaacattgtaat 555  Q
    ||||||| ||||||||||||||| | ||||||||||| |||    ||||||||||||||| ||| |||  |||||||  |||||| |||  ||||||||     
T  29160141 agagctttgagagagaaacttgggaatacaaaggaggtaacttttgggttgagtgtctttatagtgaggttctcttgagggttgggaaa--cattgtaaa 29160044  T
Q  556 caccttgggtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||||||||||||| || |||| |||||||||||||  |||||||||| |||||| |||||||    
T  29160043 caccttgggtagtga-gatttcaacattggaaggatcaaaaagcttccttttgtgttttctctt 29159981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 462 - 610
Target Start/End: Original strand, 5817036 - 5817183
Alignment:
Q  462 gcttagagagagaaactt-ggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcacct 560  Q
    |||||||||||||||||| ||| ||||||||||| |||   | |||||||||||||||||| |||  ||| || ||||||   |||||||||||  ||||    
T  5817036 gcttagagagagaaacttgggaatacaaaggaggtaactttatggttgagtgtctttgtagtgaggttctatttggttgg--gaaacattgtaaatacct 5817133  T
Q  561 tgggtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgt 610  Q
    |||| ||||| || ||||||||||||||||||  |||||||||| ||||||    
T  5817134 tggggagtga-gatttcaccattggaaggatcaaaaagcttccttttgtgt 5817183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 466 - 544
Target Start/End: Complemental strand, 79714 - 79636
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaa 544  Q
    ||||||||||||||||||||||||||||| |||   | | |||||||||||||||| |||  ||| |||||||||||||    
T  79714 agagagagaaacttggattacaaaggaggtaactttaagattgagtgtctttgtagtgaggatcttttgggttggaaaa 79636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 18390562 - 18390506
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 217  Q
    |||||||||| ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  18390562 tgttgagatt-gtcttcaaatttgtggtttagaagaacagggaaatcgtgccacgatt 18390506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 466 - 565
Target Start/End: Complemental strand, 49092015 - 49091918
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||| |||   | |||||||||||||||||  |||  | |||||||||||   |||||||| || ||||||||||    
T  49092015 agagagagaaacttggattacaaaggaggtaactttaaggttgagtgtctttgtactgaggatatcttgggttgg--gaaacattgaaaacaccttgggt 49091918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 544 - 618
Target Start/End: Complemental strand, 49091913 - 49091839
Alignment:
Q  544 aaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    |||||||| || ||||||||||||||| || ||||||||||||||||||  |||||||||| |||||| |||||||    
T  49091913 aaacattgaaaacaccttgggtagtga-gatttcaccattggaaggatcaaaaagcttccttttgtgttttctctt 49091839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 24260833 - 24260895
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgat 235  Q
    ||||||||||||||| ||| ||||||| | ||||||| |||||||| | ||||||||||||||    
T  24260833 cttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgat 24260895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 80000 - 79955
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||| | ||||||||||| ||||||||||||||||||    
T  80000 cttcaaatttgtgatttggaagaacagagaaatcgtgacacgattt 79955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 548 - 618
Target Start/End: Complemental strand, 56195 - 56125
Alignment:
Q  548 attgtaatcaccttgggtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||||| ||||||||||||||| || ||||||||||||||||||  |||||||| | |||||| |||||||    
T  56195 attgtaaacaccttgggtagtga-gatttcaccattggaaggatcaaaaagcttctttttgtgttttctctt 56125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 544 - 618
Target Start/End: Complemental strand, 35961067 - 35960993
Alignment:
Q  544 aaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||||||||| |||||| |||||||| || ||||||||||||||||||  |||||||||| ||| || |||||||    
T  35961067 aaacattgtaaacaccttaggtagtga-gatttcaccattggaaggatcaaaaagcttccttttgcgttttctctt 35960993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 4509369 - 4509335
Alignment:
Q  203 aatcgtgacacgattttggcatcgtgacacgattt 237  Q
    ||||||||||||||||||| |||||||||||||||    
T  4509369 aatcgtgacacgattttgggatcgtgacacgattt 4509335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 4511211 - 4511177
Alignment:
Q  203 aatcgtgacacgattttggcatcgtgacacgattt 237  Q
    ||||||||||||||||||| |||||||||||||||    
T  4511211 aatcgtgacacgattttgggatcgtgacacgattt 4511177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 6431467 - 6431501
Alignment:
Q  203 aatcgtgacacgattttggcatcgtgacacgattt 237  Q
    ||||||||||||||||||| |||||||||||||||    
T  6431467 aatcgtgacacgattttgggatcgtgacacgattt 6431501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 14070382 - 14070348
Alignment:
Q  203 aatcgtgacacgattttggcatcgtgacacgattt 237  Q
    |||||||||||||||||||||||||| ||||||||    
T  14070382 aatcgtgacacgattttggcatcgtggcacgattt 14070348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 14380410 - 14380376
Alignment:
Q  203 aatcgtgacacgattttggcatcgtgacacgattt 237  Q
    |||||||||||||||||||||||||| ||||||||    
T  14380410 aatcgtgacacgattttggcatcgtggcacgattt 14380376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 619
Target Start/End: Original strand, 44848567 - 44848605
Alignment:
Q  581 attggaaggatctaaagcttcctcttgtgtcttctcttt 619  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  44848567 attggaaggatcaaaagcttccttttgtgtcttctcttt 44848605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 407 - 437
Target Start/End: Original strand, 48408628 - 48408658
Alignment:
Q  407 ggaagactagtatttaagtgttcttgtgcag 437  Q
    |||||||||||||||||||||||||||||||    
T  48408628 ggaagactagtatttaagtgttcttgtgcag 48408658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 511 - 618
Target Start/End: Original strand, 9235398 - 9235503
Alignment:
Q  511 tgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtg 609  Q
    |||||| |||| |||  ||||||||||||| |||  |||||||| |||||||| ||||||  | |||||||||| |||||||  |||||||||| |||||    
T  9235398 tgtcttcgtagtgagattctcttgggttgggaaa--cattgtaaacaccttggatagtga-tatttcaccattgcaaggatcaaaaagcttccttttgtg 9235494  T
Q  610 tcttctctt 618  Q
    | |||||||    
T  9235495 ttttctctt 9235503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 49092282 - 49092237
Alignment:
Q  174 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgatttt 219  Q
    ||||||||||| || ||||||||||| ||||| |||||||||||||    
T  49092282 ttcaaatttgtagtttggaagaacagagaaattgtgacacgatttt 49092237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 385 - 437
Target Start/End: Original strand, 20343705 - 20343756
Alignment:
Q  385 atcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||||||||||||||||  | |||||||||||||| | ||||||||||||||||    
T  20343705 atcgtgacacgatttcaacagaggaagactagta-taaagtgttcttgtgcag 20343756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 405 - 437
Target Start/End: Complemental strand, 32060663 - 32060631
Alignment:
Q  405 gaggaagactagtatttaagtgttcttgtgcag 437  Q
    |||||||||||||| ||||||||||||||||||    
T  32060663 gaggaagactagtacttaagtgttcttgtgcag 32060631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 298; Significance: 1e-167; HSPs: 68)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 158 - 632
Target Start/End: Original strand, 5674227 - 5674700
Alignment:
Q  158 attgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtt 257  Q
    |||||||| | ||| ||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||| |||||   | || |||||||| |||    
T  5674227 attgttgatagttggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacatgattttgtgatgccgtgagctggtt 5674326  T
Q  258 tgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggac 357  Q
    ||||||  ||||||||||| | | ||||||||||||||||||||||||  ||||||||||| |||||||||| ||| ||||||||||| |||||||||||    
T  5674327 tgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacgattttgaaacttgctcgttaagtatccgtgataaggactggtcataccttgggac 5674426  T
Q  358 atacgtaaatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaa-gtgttcttgtgcagnnnnnnnagagagagcttg 456  Q
     |||| |||||||||||||||||||||||||||||||||||   || ||||||| ||||||||||| ||||||||||||||       || |||||||||    
T  5674427 gtacgcaaatcgtgacacgatctggaaatcgtgacacgattgtatcagaggaaggctagtatttaaagtgttcttgtgcagatttgg-ag-gagagcttg 5674524  T
Q  457 gaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatc 556  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5674525 gaagagcttagagagataaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatc 5674624  T
Q  557 accttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5674625 accttgggtagtgaggagttcaccattggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 5674700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 160 - 632
Target Start/End: Complemental strand, 22709645 - 22709173
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||| |||||||| ||||||| |||||||||||||   | || | |||||| |||||    
T  22709645 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcatgacacgaatttggcaacgtgacacgattttgtgatgccatgagctggtttg 22709546  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||||| | ||||||||||||||||||||||||||   |||||||||| |||||| ||| ||| ||||||||||| ||||||| ||| |    
T  22709545 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgtgacgt 22709446  T
Q  360 acgt--aaatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttgg 457  Q
    || |  ||||||||||||||  ||||||||||||||||||||  |  | |||||||||||||||||||||||||||||||       ||  |||| ||||    
T  22709445 acatacaaatcgtgacacgacttggaaatcgtgacacgattttattagtggaagactagtatttaagtgttcttgtgcagattttggag-tagagtttgg 22709347  T
Q  458 aagagctt--agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaat 555  Q
    ||||| ||  ||||||| |||||||||||||||||||||||||   |||||||||||||||||||| |||  |||||||||||||   |||||||||||     
T  22709346 aagagtttgaagagagaaaaacttggattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaa 22709249  T
Q  556 caccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    |||||||| |||||| || |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  22709248 caccttggatagtga-gatttcaccattggaaggatcaaaaacttcctcttgtgtcttctcttttagggttcatatt 22709173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 173 - 565
Target Start/End: Original strand, 22010201 - 22010602
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  | ||| || ||||||||||||||||||||    
T  22010201 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtaagttagtttgcaggacgccaaat 22010300  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||  ||| ||||||| ||| ||||||||| |    | |||||||||    
T  22010301 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccgttgcaaatcgtga 22010399  T
Q  373 cacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgc--------agnnnnnnnagagagagcttggaaga 461  Q
    ||||||||  |||||||||| ||||||||| || |||| |||||||||| ||  ||||||||||||        ||         |||||||||| | ||    
T  22010400 cacgatctagggaaatcgtggcacgatttcttcagagggagactagtatatattgtgttcttgtgcttttttgaagaagaacttaagagagcttgtatga 22010499  T
Q  462 gcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcacctt 561  Q
    |||||||||||| |||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  22010500 gcttagagagag-aacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacctt 22010598  T
Q  562 gggt 565  Q
    ||||    
T  22010599 gggt 22010602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 173 - 565
Target Start/End: Complemental strand, 11857555 - 11857154
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||    
T  11857555 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaat 11857456  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| ||||||| |  ||| ||||||| |||  |||||||| |    | |||||||||    
T  11857455 cgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtaacactgataaggacttgtc-aaccttgggtccgttgcaaatcgtga 11857357  T
Q  373 cacgatct-ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgc---------agnnnnnnnagagagagcttggaaga 461  Q
    |||||| | |||||||||| ||||||||| || ||||||||||||||| ||  ||||||||||||          |         |||||||||| | ||    
T  11857356 cacgatttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttactgggagaacttaagagagcttgaatga 11857257  T
Q  462 gcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcacctt 561  Q
    |||||||||||| |||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  11857256 gcttagagagag-aacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacctt 11857158  T
Q  562 gggt 565  Q
    ||||    
T  11857157 gggt 11857154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 173 - 565
Target Start/End: Original strand, 14741938 - 14742342
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  14741938 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggtcgtgagctagtttgcaggacgccaaat 14742037  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||  ||| ||||||| |||  |||||||| |    | | |||||||    
T  14742038 cgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-aaccttgggtccgttgcagatcgtga 14742136  T
Q  373 cacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgc-----agnnnnnnnag------agagagcttgga 458  Q
    ||||||||  |||||||||| ||||||||| || | ||||||||||||| ||  ||||||||||||      |       ||      |||||||||| |    
T  14742137 cacgatctaaggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttggagaaagagagtttaagagagcttgta 14742236  T
Q  459 agagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcac 558  Q
     |||||| ||||||| ||||||||| ||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  14742237 tgagctttgagagag-aacttggataacaaaggagggaaccaatgggttaagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcac 14742335  T
Q  559 cttgggt 565  Q
     ||||||    
T  14742336 tttgggt 14742342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 173 - 328
Target Start/End: Original strand, 30125030 - 30125185
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  30125030 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaat 30125129  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatc 328  Q
    |||||| |||| |||||||||||||||||||||||||||||||||| |||||||||    
T  30125130 cgtggcacgattttgggaaatcgtgacacgattcagaaacttgctcgttaagtatc 30125185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 223 - 565
Target Start/End: Original strand, 14737128 - 14737482
Alignment:
Q  223 atcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcatta 322  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||    
T  14737128 atcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgtta 14737227  T
Q  323 agtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtgacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtatt 420  Q
    ||||||  ||| ||||||| |||  |||||||| |    | | |||||||||||||||  |||||||||| ||||||||| || | |||||||||||||     
T  14737228 agtatcactgataaggacttgtc-aaccttgggtccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtata 14737326  T
Q  421 ta-agtgttcttgtgc--------agnnnnnnna---gagagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttg 508  Q
    ||  ||||||||||||        ||       |    |||||||||| | |||||| ||||||| ||||||||| ||||||||||||||||| ||||||    
T  14737327 tattgtgttcttgtgcttttttggagaaagagaacttaagagagcttgtatgagctttgagagag-aacttggataacaaaggagggaaccaatgggttg 14737425  T
Q  509 agtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  14737426 agtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 14737482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 158 - 437
Target Start/End: Original strand, 411683 - 411965
Alignment:
Q  158 attgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtt 257  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||| |||||  |||| |||||||||||     
T  411683 attgttgagatttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacgaatttggcattgtgacacaatttcgtggtgccgtgagctagtc 411782  T
Q  258 tgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcag-aaacttgctcattaagtatccttgacaaggactggtcttaccttggga 356  Q
    ||||||  ||||||||||| | ||||  ||||||||||||||||||||  | |||||||||| |||||| ||| ||| ||||||||||| ||||||||||    
T  411783 tgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttggga 411882  T
Q  357 c--atacgtaaatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    |  || |   ||||||||||| ||| |||||||||||||||||||  || | ||||| |  ||||||||||||||||||||||    
T  411883 cggatgcaccaatcgtgacacaatcaggaaatcgtgacacgattttatcagtggaaggcatgtatttaagtgttcttgtgcag 411965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 160 - 437
Target Start/End: Complemental strand, 3073343 - 3073064
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||  | || |||||||| || |     
T  3073343 tgttgagatttgtcttcaaatttgtggtctggaagaacaggaaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtcta 3073244  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttggga--c 357  Q
    ||||  ||||||||||| | ||||  | ||||||||||||||||||   |||||||||| |||||| ||| ||| ||||||||||| ||||||||||       
T  3073243 cagggtgccaaatcgtgacacgattgttggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcataccttgggatgg 3073144  T
Q  358 atacgtaaatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    || |   |||||| ||||||||||||||||||||||||||||  || | ||| | |||||||||||||||||||||||||    
T  3073143 atgcactaatcgttacacgatctggaaatcgtgacacgattttatcagtggagggctagtatttaagtgttcttgtgcag 3073064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 159 - 437
Target Start/End: Complemental strand, 16579102 - 16578825
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagttt 258  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||| |||||||||| ||    
T  16579102 ttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt 16579004  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    |||||  || |||||||||| |||| | || |||||||||||||||   ||||||||||| |||||||||||||| ||||||||||| |  ||||||       
T  16579003 gcagggtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtgg 16578904  T
Q  359 tacgtaaatcgtgacacgatct-ggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    |||| | ||||||||||||| | ||||||||||||||||||||  | |||||||  ||||| | || |||||||||||||    
T  16578903 tacgcagatcgtgacacgatttgggaaatcgtgacacgatttcaacagaggaagggtagta-taaattgttcttgtgcag 16578825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 159 - 437
Target Start/End: Original strand, 16616278 - 16616555
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagttt 258  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||| |||||||||| ||    
T  16616278 ttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt 16616376  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    |||||  || |||||||||| |||| | || |||||||||||||||   ||||||||||| |||||||||||||| ||||||||||| |  ||||||       
T  16616377 gcagggtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtgg 16616476  T
Q  359 tacgtaaatcgtgacacgatct-ggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    |||| | ||||||||||||| | ||||||||||||||||||||  | |||||||  ||||| | || |||||||||||||    
T  16616477 tacgcagatcgtgacacgatttgggaaatcgtgacacgatttcaacagaggaagggtagta-taaattgttcttgtgcag 16616555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 168 - 437
Target Start/End: Original strand, 34166673 - 34166944
Alignment:
Q  168 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-ttgcaggacg 266  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||  | || |||||| |||  |||||||       
T  34166673 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggt 34166771  T
Q  267 ccaaatcgtggcgcgatcttgggaaa-tcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaa 365  Q
     ||||||||| | |||| |||||||| ||||||||||||  |||||||||||| |||||||||||||| ||||||||||| | ||||||||| |||| ||    
T  34166772 gcaaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgtacgcaa 34166871  T
Q  366 atcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    |||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  34166872 atcgtgacacgattgggcaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 34166944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 223 - 378
Target Start/End: Complemental strand, 5266610 - 5266455
Alignment:
Q  223 atcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcatta 322  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5266610 atcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcatta 5266511  T
Q  323 agtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtgacacgat 378  Q
    ||||||||||| ||||||||||| |||||||  ||  ||| |||||||||||||||    
T  5266510 agtatccttgataaggactggtcataccttgaaacggacgcaaatcgtgacacgat 5266455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 160 - 437
Target Start/End: Original strand, 6026834 - 6027111
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-tt 258  Q
    |||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||  ||||| ||||||||||||| ||||| || |||||||  ||    
T  6026834 tgttgagatt-gtcttcaaatttgtggtttggaagaatagggaaatcgtgacacgattgcggcattgtgacacgatttcgaggtg-cgagagctagggtt 6026931  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    |||||    ||||||||||| |||| | || ||||||||||||||| ||||||||||||| |||||||||||||| |||||| |||| | |||||||||     
T  6026932 gcaggggtgcaaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggaccggtcgttccttgggacg 6027031  T
Q  359 tacgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
     ||| |||||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  6027032 gacgcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 6027111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 160 - 437
Target Start/End: Original strand, 16554454 - 16554730
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||  |||| |||||||||| ||     
T  16554454 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggggtgccgtgagctaggtta 16554552  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  || |||| ||||| |||| | || |||||||||||||||   ||||||||||| |||||||||||||| ||||||||||| |  ||||||   |    
T  16554553 cagggtgcaaaattgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggt 16554652  T
Q  360 acgtaaatcgtgacacgatct-ggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||| | ||||||||||||| | ||||||||||||||||||||  | ||||||| |||||| | || |||||||||||||    
T  16554653 acgcagatcgtgacacgatttgggaaatcgtgacacgatttcaacagaggaaggctagta-taaattgttcttgtgcag 16554730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 160 - 437
Target Start/End: Original strand, 16631010 - 16631286
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||  |||| |||||||||| ||     
T  16631010 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggggtgccgtgagctaggtta 16631108  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  || |||| ||||| |||| | || |||||||||||||||   ||||||||||| |||||||||||||| ||||||||||| |  ||||||   |    
T  16631109 cagggtgcaaaattgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggt 16631208  T
Q  360 acgtaaatcgtgacacgatct-ggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||| | ||||||||||||| | ||||||||||||||||||||  | ||||||| |||||| | || |||||||||||||    
T  16631209 acgcagatcgtgacacgatttgggaaatcgtgacacgatttcaacagaggaaggctagta-taaattgttcttgtgcag 16631286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 158 - 437
Target Start/End: Complemental strand, 6136549 - 6136271
Alignment:
Q  158 attgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt- 256  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||  | || ||||||||||      
T  6136549 attgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggaatcgagacacgatttcg-gatgccgtgagctaggg 6136452  T
Q  257 ttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttggga 356  Q
    |||||||     |||||||||| ||||  ||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||| | ||||||||    
T  6136451 ttgcaggggtgaaaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttggga 6136352  T
Q  357 catacgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    |  | | |||||||||||| ||  || ||||||||||||||||    | ||||||||||||||||||||| |||||||||||    
T  6136351 cggaagcaaatcgtgacacaattgggaaaatcgtgacacgattggaacagaggaagactagtatttaagt-ttcttgtgcag 6136271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 160 - 437
Target Start/End: Complemental strand, 33342688 - 33342410
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-tt 258  Q
    |||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||| |||| ||| |||||||  | || ||||||||||  ||    
T  33342688 tgttgagatt-gtcttcaaatttgtggtttggaagaacatggaaatcgtgacacgattttgggatcgcgacgcgatttcg-gatgccgtgagctagggtt 33342591  T
Q  259 gcaggacgccaaatcgtggcgcgatct-tgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggac 357  Q
    |||||    ||||||||||| |||| | |||||||||||||||||||  |||||||||||| |||||||||||||| ||||||||||| | |||||||||    
T  33342590 gcaggggtgcaaatcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 33342491  T
Q  358 atacgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
      ||| |||||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  33342490 ggacgcaaatcgtgacacgattgggcaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 33342410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 160 - 378
Target Start/End: Original strand, 27647467 - 27647685
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||| |||||||||| |||    
T  27647467 tgttgagttttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttg 27647566  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  || |||||||||| ||||  || ||||||||||||||||   ||||||||||| |||||||||||||| |  |||||||| |  ||||||   |    
T  27647567 cagggtgcaaaatcgtggcacgattgtgagaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgatattgactggtcgtttcttgggtggt 27647666  T
Q  360 acgtaaatcgtgacacgat 378  Q
    ||| | |||||||||||||    
T  27647667 acgcagatcgtgacacgat 27647685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 156 - 437
Target Start/End: Original strand, 34164440 - 34164722
Alignment:
Q  156 ttattgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctag 255  Q
    ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||| ||| |||||||| |||||||  | || |||||| |||    
T  34164440 ttattgttgag-tttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgatttcg-gatgccgtgagttag 34164537  T
Q  256 t-ttgcaggacgccaaatcgtggcgcgatcttgggaaa-tcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttg 353  Q
      |||||||    ||||||||| | |||| |||||||| ||||||||||||  |||||||||||| |||||||||||||| ||||||||||| | |||||    
T  34164538 ggttgcaggggtgcaaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttg 34164637  T
Q  354 ggacatacgtaaatcgtgacacgatctgg--aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||||  ||| ||||||||||||||| |||  ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  34164638 ggacggacgcaaatcgtgacacgat-tggacaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 34164722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 160 - 378
Target Start/End: Complemental strand, 2172104 - 2171884
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    ||||||||||||  |||||||||||||||||||||||||| ||||||| |||| || ||||||||||||||||||||||  | || |||||||| |||||    
T  2172104 tgttgagatttggtttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 2172005  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||||| | ||||||||||||||||||||||||||   |||||||||| |||||| |||  || |||||| |||| ||||||| ||| |    
T  2172004 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattgtaaaacttgctcgttaagtttccaagataaggacaggtcgtaccttgtgacgt 2171905  T
Q  360 acgta--aatcgtgacacgat 378  Q
    |||||  ||||||||||||||    
T  2171904 acgtaccaatcgtgacacgat 2171884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 160 - 397
Target Start/End: Original strand, 25420797 - 25421034
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gttt 258  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||  | || ||||||||| | ||    
T  25420797 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacaattttgggaccgtgacacgatttc-ggatgccgtgagctagggtt 25420894  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    |||||    ||||||||||| |||| | || |||||||||||||||   ||||||||||| |||||||||||||| ||||||||||| | |||||||||     
T  25420895 gcaggggtgcaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 25420994  T
Q  359 tacgtaaatcgtgacacgatctgg-aaatcgtgacacgat 397  Q
     ||| ||||||||||| |||  || |||||||||||||||    
T  25420995 gacgcaaatcgtgacatgattgggaaaatcgtgacacgat 25421034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 168 - 378
Target Start/End: Original strand, 13150856 - 13151067
Alignment:
Q  168 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-ttgcaggacg 266  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||| |||||||  | || |||||| |||  |||||||       
T  13150856 tttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggt 13150954  T
Q  267 ccaaatcgtggcgcgatcttgggaaa-tcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaa 365  Q
     ||||||||| | |||| |||||||| ||||||||||||  |||||||||||| |||||||||||||| ||||||||||| | |||||||||  ||| ||    
T  13150955 gcaaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaa 13151054  T
Q  366 atcgtgacacgat 378  Q
    |||||||||||||    
T  13151055 atcgtgacacgat 13151067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 173 - 400
Target Start/End: Complemental strand, 6439071 - 6438843
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gtttgcaggacgccaaa 271  Q
    |||||||||| |||||||||||||||  ||||||||||||||||||||| ||||||||||||||  | |||| ||||||| | |||||| ||| ||  ||    
T  6439071 cttcaaatttatggtctggaagaacatagaaatcgtgacacgattttggaatcgtgacacgattgga-ggtgccgtgagccaagtttgctggatgcataa 6438973  T
Q  272 tcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtg 371  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||  |||| || ||    | | ||||||    
T  6438972 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaagtatcactgataaggactggtc-aacctgggaaccgttgcagatcgtg 6438874  T
Q  372 acacgatct--ggaaatcgtgacacgatttc 400  Q
    |||||||||  ||||||||||||||||||||    
T  6438873 acacgatctagggaaatcgtgacacgatttc 6438843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 160 - 435
Target Start/End: Complemental strand, 16839331 - 16839054
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gttt 258  Q
    |||||| | ||| ||||||||||||||| ||||||||||| | ||||||| | |||||| |  |||||||||||||   | | || ||||||| | ||||    
T  16839331 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcgga-gatgccgtgagccaagttt 16839233  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    || ||| || |||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||  ||||||||||     
T  16839232 gctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttgggacc 16839134  T
Q  359 tacgtaaatcgtgacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtat-ttaagtgttcttgtgc 435  Q
       | | |||||||||||||||  |||||||||||||||||||| || | | | ||||||||| | ||||||||||||||    
T  16839133 gttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 16839054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 160 - 435
Target Start/End: Original strand, 33329932 - 33330209
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gttt 258  Q
    |||||| | ||| ||||||||||||||| ||||||||||| | ||||||| | |||||| |  |||||||||||||   | | || ||||||| | ||||    
T  33329932 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcgga-gatgccgtgagccaagttt 33330030  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    || ||| || |||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||  |||| |||||     
T  33330031 gctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacctggggacc 33330129  T
Q  359 tacgtaaatcgtgacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
       | | |||||||||||||||  |||||||||| ||||||||| || | | | ||||||||||| ||||||||||||||    
T  33330130 gttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgc 33330209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 159 - 629
Target Start/End: Original strand, 5756950 - 5757408
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagttt 258  Q
    ||||||| ||||| ||| |||||| |||| |  ||||| || ||||| ||||||||||| |||||||||||||| ||||     ||||||||| | ||||    
T  5756950 ttgttgaaatttggctttaaatttatggtttaaaagaatagagaaattgtgacacgattgtggcatcgtgacacaattttgtaatgtcgtgagttggttt 5757049  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    |||||  | ||||||||||  |||| ||| |||||||||||||||||   |||||||||  |||||| | |  || ||||  ||||| |||||| || |     
T  5757050 gcagggtgtcaaatcgtggtacgattttgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggt-tggtcgtacctttggtcg 5757148  T
Q  359 tacgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttg 456  Q
    || |||  ||||||| |||||| |||||| |||| ||||||||  || |  |||||||  ||  |||||||| ||||||||       || ||||||| |    
T  5757149 tatgtatcaatcgtggcacgatttggaaaacgtggcacgattttatcagctgaagactgctaaataagtgtttttgtgcagattttggag-gagagct-g 5757246  T
Q  457 gaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatc 556  Q
    ||||||       ||||||||||||||||||||||||| |||   |||||||||||||||||||   ||  |||||||||||||   ||||||||||| |    
T  5757247 gaagag-------agagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtatttaggatctcttgggttgg--gaaacattgtaaac 5757337  T
Q  557 accttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat 629  Q
    |||||||||||||| || |||||||||||||||||| ||||||||||   |||||||||| ||||||||||||    
T  5757338 accttgggtagtga-gatttcaccattggaaggatcaaaagcttccttccgtgtcttctc-tttagggttcat 5757408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 158 - 276
Target Start/End: Complemental strand, 6097988 - 6097870
Alignment:
Q  158 attgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtt 257  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||  | || |||||||| |||    
T  6097988 attgttgagatttgtcttcaaatttgtggtttggaagaacagggaaatcctgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtt 6097889  T
Q  258 tgcaggacgccaaatcgtg 276  Q
    ||||||  || ||||||||    
T  6097888 tgcagggtgctaaatcgtg 6097870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 464 - 618
Target Start/End: Complemental strand, 31979840 - 31979689
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    ||||||||||||||||||| | ||||||||| |||   |||||||||||||||||||| |||  ||| ||||||||  | ||||||||||| ||||||||    
T  31979840 ttagagagagaaacttggactgcaaaggaggtaactttagggttgagtgtctttgtagtgaggttcttttgggttg--agaaacattgtaaacaccttgg 31979743  T
Q  564 gtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctctt 618  Q
    ||||||| || |||||||||||||||||| |||||||||| |||||| |||||||    
T  31979742 gtagtga-gatttcaccattggaaggatcaaaagcttccttttgtgttttctctt 31979689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 159 - 435
Target Start/End: Complemental strand, 6006008 - 6005730
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gtt 257  Q
    ||||||| | ||| ||||||||||||||| ||||| ||||| | ||||||| | |||||| |  |||||||||||||   | | || | ||||| | |||    
T  6006008 ttgttgaaaattggcttcaaatttgtggtttggaaaaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcgga-gatgccatgagccaagtt 6005910  T
Q  258 tgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggac 357  Q
    ||| ||| || |||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||  |||| |||||    
T  6005909 tgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacctggggac 6005811  T
Q  358 atacgtaaatcgtgacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
        | | |||||||||||||||  |||||||||| ||||||||| || | | | ||||||||||| ||||||||||||||    
T  6005810 cgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgc 6005730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 160 - 435
Target Start/End: Original strand, 33335429 - 33335706
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gttt 258  Q
    |||||| | ||| ||||||||||||||| ||||||||||| | ||||||  | |||||| |  |||||||||||||   | | || ||||||| | ||||    
T  33335429 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtttcgcgatttggcaatcgtgacacgatcgga-gatgccgtgagccaagttt 33335527  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    || ||| || |||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||  |||| |||||     
T  33335528 gctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacctggggacc 33335626  T
Q  359 tacgtaaatcgtgacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
       | | |||||||||||||||  |||||||||| ||||||||| || | | | ||||||||||| |||||||| |||||    
T  33335627 gttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcatgtgc 33335706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 290 - 437
Target Start/End: Original strand, 25421020 - 25421168
Alignment:
Q  290 aaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtgacacgatctgg-aaatcg 388  Q
    |||||||||||||||   ||||||||||| |||||||||||||| ||||||||||| | |||||||||  ||| ||||||||||| |||  || ||||||    
T  25421020 aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacatgattgggaaaatcg 25421119  T
Q  389 tgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||||||||||    | |||||||||||||| ||||||||||||||||||    
T  25421120 tgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 25421168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 464 - 618
Target Start/End: Original strand, 5572012 - 5572163
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    ||||||||||||||||||||||||| ||||| |||   ||||||| |||||||||||| | |  |||||||||||||   ||||||||||| ||||||||    
T  5572012 ttagagagagaaacttggattacaatggaggtaactttagggttgggtgtctttgtagtggggatctcttgggttgg--gaaacattgtaaacaccttgg 5572109  T
Q  564 gtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctctt 618  Q
    ||||||| || ||||| ||||||| |||| |||||||||| |||||| |||||||    
T  5572110 gtagtga-gatttcactattggaatgatcaaaagcttccttttgtgttttctctt 5572163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 160 - 305
Target Start/End: Complemental strand, 23896957 - 23896812
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||| ||||| ||||||||||||||| || ||||||||  ||||||||||||||||||||||||||||||||||||     | ||||||| | |||||    
T  23896957 tgttgaaatttgccttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattttgtaatatcgtgagttggtttg 23896858  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgatt 305  Q
    ||||  | ||||||||||  |||| ||| |||||||||||||||||    
T  23896857 cagggtgtcaaatcgtggtacgattttgtgaaatcgtgacacgatt 23896812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 160 - 237
Target Start/End: Original strand, 26253589 - 26253666
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgattt 237  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||| |||||    
T  26253589 tgttgagatttgtcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacaagattt 26253666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 254 - 435
Target Start/End: Original strand, 28155164 - 28155347
Alignment:
Q  254 agtttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttg 353  Q
    ||||||||||  || |||||||||| ||||||||||||||||||||||||| ||||||||||||  |||||||||  ||| |||||||||||  |||| |    
T  28155164 agtttgcagggtgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggtc-aacctgg 28155262  T
Q  354 ggacatacgtaaatcgtgacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgc 435  Q
    ||||    | | |||||||||||||||  |||||||||||||||||||| || | ||| ||||||||| ||  ||||||||||||    
T  28155263 ggaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaggactagtatatattgtgttcttgtgc 28155347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 466 - 618
Target Start/End: Original strand, 31086245 - 31086394
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    |||||||||||||||||||||||||| || |||   |||||||||||||||||||| |||  |||||| |||||  | ||||||||||| ||||||||||    
T  31086245 agagagagaaacttggattacaaagggggtaactttagggttgagtgtctttgtagtgaggatctcttaggttg--agaaacattgtaaacaccttgggt 31086342  T
Q  566 agtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctctt 618  Q
     |||| || |||||||||||||||||| |||||||| | || ||| |||||||    
T  31086343 tgtga-gatttcaccattggaaggatcaaaagcttctttttatgttttctctt 31086394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 464 - 592
Target Start/End: Complemental strand, 31936903 - 31936778
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    ||||||||||||||||||||| ||||||||| |||   |||||||||||||||||||| |||  ||| |||||||||   ||||||||||| ||||||||    
T  31936903 ttagagagagaaacttggattgcaaaggaggtaactttagggttgagtgtctttgtagtgaggatctattgggttgg--gaaacattgtaaacaccttgg 31936806  T
Q  564 gtagtgaggagttcaccattggaaggatc 592  Q
    ||||||| || ||||||||||||||||||    
T  31936805 gtagtga-gatttcaccattggaaggatc 31936778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 223 - 437
Target Start/End: Original strand, 16652759 - 16652973
Alignment:
Q  223 atcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcatta 322  Q
    ||||||||||||||||  |||| |||||||||| ||| |||  || || ||||||  |||| | || |||||||||||| ||   ||||||||||| |||    
T  16652759 atcgtgacacgatttcggggtgccgtgagctaggttgtagggtgcaaagtcgtggaacgatttgggaaaatcgtgacacaatcgtgaaacttgctcgtta 16652858  T
Q  323 agtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtgacacgatct-ggaaatcgtgacacgatttcctctgaggaagactagtattt 421  Q
    ||||||||||| ||||||||||| |  ||||||   |||| | ||||||||||||| | ||||||||||||||||||||  | ||||||| |||||| |     
T  16652859 agtatccttgataaggactggtcgtttcttgggtggtacgcagatcgtgacacgatttgggaaatcgtgacacgatttcaacagaggaaggctagta-ta 16652957  T
Q  422 aagtgttcttgtgcag 437  Q
    || |||||||||||||    
T  16652958 aattgttcttgtgcag 16652973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 466 - 618
Target Start/End: Original strand, 24435743 - 24435892
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||| ||||||||||||||  |||   |||||||||||||||||| | |||  ||||||| |||||   ||||||||||| ||||||||||    
T  24435743 agagagagaaactaggattacaaaggagataactttagggttgagtgtctttgt-gtgaggttctcttgagttgg--gaaacattgtaaacaccttgggt 24435839  T
Q  566 agtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||| || ||||||||||||||||||  |||||||||| |||||| |||||||    
T  24435840 agtga-gatttcaccattggaaggatcaaaaagcttccttttgtgttttctctt 24435892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 156 - 238
Target Start/End: Original strand, 34151824 - 34151905
Alignment:
Q  156 ttattgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttc 238  Q
    ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||| ||| |||||||| |||||||    
T  34151824 ttattgttgag-tttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgatttc 34151905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 470 - 592
Target Start/End: Original strand, 5017271 - 5017390
Alignment:
Q  470 agagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtg 569  Q
    |||||||||||||||||||| |||  |||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||| ||||||||||| ||    
T  5017271 agagaaacttggattacaaacgagataactttagggttgagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaacaccttgggtaatg 5017368  T
Q  570 aggagttcaccattggaaggatc 592  Q
    | || ||||||||||||||||||    
T  5017369 a-gatttcaccattggaaggatc 5017390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 173 - 345
Target Start/End: Complemental strand, 5344052 - 5343880
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtc-gtgagcta-gtttgcaggacgccaa 270  Q
    ||||||||||||||| ||| ||||||| ||||||||| |||||||| | ||||||||||||||  || || |   |||||| | || | | | | || ||    
T  5344052 cttcaaatttgtggtttgggagaacagagaaatcgtgtcacgatttggtcatcgtgacacgat--cagggaggaagtgagccaagtcttctgaaagcaaa 5343955  T
Q  271 atcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtc 345  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||    
T  5343954 atcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 5343880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 16652716 - 16652773
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  16652716 tgttgagatt-gtcttcaaatttgtggtctgaaagaacagggaaatcgtgacacgattt 16652773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 544 - 618
Target Start/End: Complemental strand, 18233096 - 18233023
Alignment:
Q  544 aaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctctt 618  Q
    ||||||||||| |||||||||||||||| | |||||||||||||||||| |||||||||| |||||| |||||||    
T  18233096 aaacattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgttttctctt 18233023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 462 - 618
Target Start/End: Original strand, 21801108 - 21801265
Alignment:
Q  462 gcttagagagagaaacttg-gattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttggaaaaaacattgtaatcac 558  Q
    |||| |||||||||||||| || ||||||| ||| |||   |||||||||||||||||||| |||  |||||||  |||||| |||  |||||||| |||    
T  21801108 gctttgagagagaaacttgagaatacaaagcaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacac 21801205  T
Q  559 cttgggtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    |||||||||||| || |||| |||||||||||||  |||||||||| |||||| |||||||    
T  21801206 cttgggtagtga-gatttcaacattggaaggatcaaaaagcttccttttgtgttttctctt 21801265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 468 - 592
Target Start/End: Complemental strand, 22964023 - 22963902
Alignment:
Q  468 agagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtag 567  Q
    |||||||||||| ||||||||| |||  |||   |||||||||||||||||||| ||   |||||||| |||| |||  |||||||| ||||||||||||    
T  22964023 agagagaaactttgattacaaaagagctaactttagggttgagtgtctttgtagtgaagatctcttggattgggaaa--cattgtaaacaccttgggtag 22963926  T
Q  568 tgaggagttcaccattggaaggatc 592  Q
    ||| || ||||||||||||||||||    
T  22963925 tga-gatttcaccattggaaggatc 22963902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 468 - 592
Target Start/End: Original strand, 23824370 - 23824491
Alignment:
Q  468 agagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtag 567  Q
    |||||||||||| ||||||||| |||  |||   |||||||||||||||||||| ||   |||||||| |||| |||  |||||||| ||||||||||||    
T  23824370 agagagaaactttgattacaaaagagctaactttagggttgagtgtctttgtagtgaagatctcttggattgggaaa--cattgtaaacaccttgggtag 23824467  T
Q  568 tgaggagttcaccattggaaggatc 592  Q
    ||| || ||||||||||||||||||    
T  23824468 tga-gatttcaccattggaaggatc 23824491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 511 - 629
Target Start/End: Complemental strand, 21356318 - 21356204
Alignment:
Q  511 tgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgt 610  Q
    ||||||||||| |||  ||||||||||| | |||  |||||||| ||||||||||||||| || |||| ||||||||| ||| |||||||||| ||||||    
T  21356318 tgtctttgtagtgaggatctcttgggttaggaaa--cattgtaaacaccttgggtagtga-gatttcatcattggaagaatcaaaagcttccttttgtgt 21356222  T
Q  611 cttctcttttagggttcat 629  Q
    ||| || ||||||||||||    
T  21356221 cttttc-tttagggttcat 21356204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 290 - 433
Target Start/End: Original strand, 26253698 - 26253843
Alignment:
Q  290 aaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgta--aatcgtgacacgatctggaaatc 387  Q
    ||||||||||||||||   |||||||||  |||||| | |  || ||||||||||| ||| ||| ||| ||||||  |||||||||||||| ||||||||    
T  26253698 aaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggactggtcgtactttgtgacgtacgtatcaatcgtgacacgatttggaaatc 26253797  T
Q  388 gtgacacgatttcctctgaggaagactagtatttaagtgttcttgt 433  Q
    ||| ||||||||  || |  | ||||| ||||||||||||||||||    
T  26253798 gtggcacgattttatcagttggagacttgtatttaagtgttcttgt 26253843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 5266641 - 5266596
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  5266641 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 5266596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 14737097 - 14737142
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  14737097 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 14737142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 466 - 521
Target Start/End: Original strand, 10076962 - 10077017
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtag 521  Q
    ||||||||||||||||||||||||||||| |||   ||||||||||||||||||||    
T  10076962 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtag 10077017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 544 - 618
Target Start/End: Complemental strand, 4630203 - 4630130
Alignment:
Q  544 aaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctctt 618  Q
    ||||||| ||| ||| |||||||||||| | |||||||||||||||||| |||||||||| |||||| |||||||    
T  4630203 aaacattttaaacacattgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgttttctctt 4630130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 466 - 540
Target Start/End: Complemental strand, 18234409 - 18234335
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgg 540  Q
    ||||| ||||||||||||||||||||||| | |   |||||||||||||||||||| |||  |||||||||||||    
T  18234409 agagaaagaaacttggattacaaaggaggtagctttagggttgagtgtctttgtagtgaggatctcttgggttgg 18234335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 6097800 - 6097747
Alignment:
Q  384 aatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||||||||||||||||  || | |||||||||||||||||||||||||||||||    
T  6097800 aatcgtgacacgattttatcaggggaagactagtatttaagtgttcttgtgcag 6097747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 290 - 378
Target Start/End: Complemental strand, 6097877 - 6097787
Alignment:
Q  290 aaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgta--aatcgtgacacgat 378  Q
    ||||||||||||||||   |||||||||| |||||| ||| ||| ||||||||||| ||||| ||||| |||| |  ||||||||||||||    
T  6097877 aaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtacctggggacgtacgcaccaatcgtgacacgat 6097787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 544 - 591
Target Start/End: Complemental strand, 14521924 - 14521877
Alignment:
Q  544 aaacattgtaatcaccttgggtagtgaggagttcaccattggaaggat 591  Q
    ||||||||||| |||||||||||||||| | |||||||||||||||||    
T  14521924 aaacattgtaaacaccttgggtagtgagaatttcaccattggaaggat 14521877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 28155102 - 28155145
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgat 216  Q
    ||||||||||||||||||||||||||| | ||||||||||||||    
T  28155102 cttcaaatttgtggtctggaagaacagagcaatcgtgacacgat 28155145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 503 - 565
Target Start/End: Complemental strand, 28184749 - 28184684
Alignment:
Q  503 gggttgagtgtctttgtagagagtgtctcttgggtt---ggaaaaaacattgtaatcaccttgggt 565  Q
    |||||||| |||||||| ||||||||||||||||||   | ||||||||| |||||||||||||||    
T  28184749 gggttgagggtctttgttgagagtgtctcttgggtttgggaaaaaaacatagtaatcaccttgggt 28184684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 469 - 539
Target Start/End: Original strand, 21272763 - 21272833
Alignment:
Q  469 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttg 539  Q
    ||||||||||| ||||||||||| || |||   |||||||||||||||||||| |||  ||||||||||||    
T  21272763 gagagaaactttgattacaaagggggtaactttagggttgagtgtctttgtagtgaggttctcttgggttg 21272833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 2171897 - 2171844
Alignment:
Q  384 aatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||||||||||||||||  || | ||||| |||||||||||||||||||||||||    
T  2171897 aatcgtgacacgattttatcagtggaaggctagtatttaagtgttcttgtgcag 2171844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 5016981 - 5017026
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||| |||||||||||  |||||||||||||||||    
T  5016981 cttcaaatttgtggtttggaagaacagaaaaatcgtgacacgattt 5017026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 31085958 - 31086003
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||| | ||||||||| ||||||||||||||||||    
T  31085958 cttcaaatttgtggtttagaagaacagagaaatcgtgacacgattt 31086003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 5571755 - 5571806
Alignment:
Q  167 atttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||||||| | ||| |||| || ||||||||||||||||||    
T  5571755 atttgtcttcaaatttgtgttttgggagaatagagaaatcgtgacacgattt 5571806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 521 - 564
Target Start/End: Original strand, 28155432 - 28155475
Alignment:
Q  521 gagagtgtctcttgggttggaaaaaacattgtaatcaccttggg 564  Q
    |||||||| |||| |||||| |||||||||||||||||||||||    
T  28155432 gagagtgtttcttaggttgggaaaaacattgtaatcaccttggg 28155475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 466 - 516
Target Start/End: Complemental strand, 23896678 - 23896628
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctt 516  Q
    ||||||||||||||||||||||||||||| |||   || ||||||||||||    
T  23896678 agagagagaaacttggattacaaaggaggtaactttagagttgagtgtctt 23896628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 21272474 - 21272514
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacac 213  Q
    ||||||||||||| | |||| ||||||||||||||||||||    
T  21272474 cttcaaatttgtgttttggaggaacagggaaatcgtgacac 21272514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 283; Significance: 1e-158; HSPs: 70)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 159 - 628
Target Start/End: Complemental strand, 24136485 - 24136017
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagttt 258  Q
    ||||||| |||||  |||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| |||||  | || |||||||||||||    
T  24136485 ttgttgatatttggtttcaaatttgtggtctggaagaacacagaaatcgtgacacgaatttggcatcgtgacacaatttcgtgatgccgtgagctagttt 24136386  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    |||||  ||||||||||| | ||||||||||||||||||||||||||   |||||||||| |||||||||||||| ||||||||||| |||||||||||     
T  24136385 gcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacg 24136286  T
Q  359 tacgtaaatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaa-gtgttcttgtgcagnnnnnnnagag-agagcttg 456  Q
    |||| ||||||||||||||||||||||||||| |||||||   || ||||||  ||||||| ||| |||||||||||||         ||| ||||||||    
T  24136285 tacgcaaatcgtgacacgatctggaaatcgtggcacgattgtatcagaggaaagctagtatataaagtgttcttgtgcatttttg---gagtagagcttg 24136189  T
Q  457 gaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatc 556  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  24136188 gaagagctaagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagaaagtgtctcttgggttgggaaaaacattgtaatc 24136089  T
Q  557 accttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttca 628  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24136088 accttgggtagtgaggagttcaccattggaaggatctaaagcttcctctagtgtcttctcttttagggttca 24136017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 223 - 632
Target Start/End: Complemental strand, 31180787 - 31180379
Alignment:
Q  223 atcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcatta 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||| |||    
T  31180787 atcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagagactttctcgtta 31180688  T
Q  323 agtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtgacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtatt 420  Q
    ||||||  ||| |||||||||||  |||||||| || ||| ||||||||||| |||||  |||||||||| ||||||| | || |||||||||||||||     
T  31180687 agtatcactgataaggactggtca-accttgggtcagacgcaaatcgtgacatgatcttgggaaatcgtggcacgattgcttcagaggaagactagtata 31180589  T
Q  421 taa-gtgttcttgtgcagnnnnnnnagagagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgt 519  Q
    ||  ||||||||||||         || | | |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  31180588 tattgtgttcttgtgc--tttttgaagcggg-gcttggaagagcttagagagagaa-cttggataacaaaggagggaaccaaagggttgagtgtctttgt 31180493  T
Q  520 agagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgaggagttcacca-ttggaaggatctaaagcttcctcttgtgtcttctctt 618  Q
     |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||| ||||||||||||    
T  31180492 tgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctctt 31180393  T
Q  619 ttagggttcatatt 632  Q
    ||| ||||||||||    
T  31180392 ttatggttcatatt 31180379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 290 - 632
Target Start/End: Complemental strand, 35388169 - 35387827
Alignment:
Q  290 aaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgt--aaatcgtgacacgatctggaaatc 387  Q
    |||| |||||||||||   |||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||  ||||||||||||||||||||||||    
T  35388169 aaattgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacgtacgttcaaatcgtgacacgatctggaaatc 35388070  T
Q  388 gtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttggaagagcttagagagagaaacttggattaca 487  Q
    ||||||||||||  || ||||||| |||||||||||||||||||||||||       | |||||||||||||||||||||||||| ||||||||||||||    
T  35388069 gtgacacgattttatcagaggaaggctagtatttaagtgttcttgtgcagattttgga-agagagcttggaagagcttagagagaaaaacttggattaca 35387971  T
Q  488 aaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgaggagttcaccattggaa 587  Q
    |||||||||||   |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  35387970 aaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttggaaaaaacattgtaatcaccttgggtagtga-gatttcaccattggaa 35387872  T
Q  588 ggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||    
T  35387871 ggatctaaaacttcctctagtgtcttctcttttagggttcatatt 35387827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 173 - 565
Target Start/End: Complemental strand, 27450397 - 27449994
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  27450397 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgcaggacgccaaat 27450298  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||| ||||||||| || ||| |||||||||    
T  27450297 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcagacgcaaatcgtga 27450199  T
Q  373 cacgatct-ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgc-----------agnnnnnnnagagagagcttggaa 459  Q
    |||||| | |||||||||| ||||||| | || ||||||| ||||||| ||  ||||||||||||           |          |||||||||| |     
T  27450198 cacgatttgggaaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgcttttttacaaaaaaaaaacttaagagagcttgaat 27450099  T
Q  460 gagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcacc 559  Q
    |||||||||||||| |||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  27450098 gagcttagagagag-aacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacc 27450000  T
Q  560 ttgggt 565  Q
    ||||||    
T  27449999 ttgggt 27449994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 173 - 565
Target Start/End: Complemental strand, 27445554 - 27445150
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  27445554 cttcaaatttgtggtctagaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgcaggacgccaaat 27445455  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||| ||||||||| || ||| |||||||||    
T  27445454 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcagacgcaaatcgtga 27445356  T
Q  373 cacgatct-ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgcagnnnnnnnaga------------gagagcttgga 458  Q
    |||||| | |||||||||| ||||||| | || ||||||| ||||||| ||  ||||||||||||         | |            ||||||||| |    
T  27445355 cacgatttgggaaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgcttttttacaaaaaaaaaaacttaagagagcttgaa 27445256  T
Q  459 agagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcac 558  Q
     |||||||||||||| |||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  27445255 tgagcttagagagag-aacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcac 27445157  T
Q  559 cttgggt 565  Q
    |||||||    
T  27445156 cttgggt 27445150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 173 - 565
Target Start/End: Complemental strand, 43599306 - 43598904
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtc-gtgagctagtttgcaggacgccaaa 271  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| | | |||||||||||||||||||||||||    
T  43599306 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagtttgcaggacgccaaa 43599207  T
Q  272 tcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtg 371  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||| ||||||||| || ||| ||||||||    
T  43599206 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcagacgcaaatcgtg 43599108  T
Q  372 acacgatct-ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtg---------cagnnnnnnnagagagagcttggaag 460  Q
    ||||||| | |||||||||||||||||| | || ||||||| ||||||| ||  |||||||||||           |         |||||||||| | |    
T  43599107 acacgatttgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtgtttttttactgggagaacttaagagagcttgaatg 43599008  T
Q  461 agcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcacct 560  Q
    ||||||||||||| |||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  43599007 agcttagagagag-aacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacct 43598909  T
Q  561 tgggt 565  Q
    |||||    
T  43598908 tgggt 43598904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 173 - 565
Target Start/End: Complemental strand, 43604798 - 43604396
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtc-gtgagctagtttgcaggacgccaaa 271  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| | | |||||||||||||||||||||||||    
T  43604798 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagtttgcaggacgccaaa 43604699  T
Q  272 tcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtg 371  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||| ||||||||| || ||| ||||||||    
T  43604698 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcagacgcaaatcgtg 43604600  T
Q  372 acacgatct-ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtg---------cagnnnnnnnagagagagcttggaag 460  Q
    ||||||| | |||||||||||||||||| | || ||||||| ||||||| ||  |||||||||||           |         |||||||||| | |    
T  43604599 acacgatttgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtgtttttttactgggagaacttaagagagcttgaatg 43604500  T
Q  461 agcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcacct 560  Q
    ||||||||||||| |||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  43604499 agcttagagagag-aacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacct 43604401  T
Q  561 tgggt 565  Q
    |||||    
T  43604400 tgggt 43604396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 173 - 565
Target Start/End: Complemental strand, 43610290 - 43609888
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtc-gtgagctagtttgcaggacgccaaa 271  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| | | |||||||||||||||||||||||||    
T  43610290 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagtttgcaggacgccaaa 43610191  T
Q  272 tcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtg 371  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||| ||||||||| || ||| ||||||||    
T  43610190 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcagacgcaaatcgtg 43610092  T
Q  372 acacgatct-ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtg---------cagnnnnnnnagagagagcttggaag 460  Q
    ||||||| | |||||||||||||||||| | || ||||||| ||||||| ||  |||||||||||           |         |||||||||| | |    
T  43610091 acacgatttgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtgtttttttactgggagaacttaagagagcttgaatg 43609992  T
Q  461 agcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcacct 560  Q
    ||||||||||||| |||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  43609991 agcttagagagag-aacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacct 43609893  T
Q  561 tgggt 565  Q
    |||||    
T  43609892 tgggt 43609888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 246 - 632
Target Start/End: Complemental strand, 38219944 - 38219563
Alignment:
Q  246 cgtgagctagtttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtc 345  Q
    |||||||| ||||| |||  ||||||||||| | |||||||||||||| |||||||||||   |||||||||  |||||| ||| ||| |||||||||||    
T  38219944 cgtgagctggtttgtagggtgccaaatcgtgacacgatcttgggaaattgtgacacgattttcaaacttgcttgttaagtttccatgataaggactggtc 38219845  T
Q  346 ttaccttgggacatacgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnn 443  Q
     ||||||| ||| |||||   |||||||||||||| ||||||||||||||| ||||  || ||||||| ||||||     ||||||||||||||          
T  38219844 gtaccttgtgacgtacgttccaatcgtgacacgatttggaaatcgtgacacaattttatcagaggaaggctagta-----gtgttcttgtgcagattttg 38219750  T
Q  444 nagagagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaa 543  Q
     ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||| |||  ||||||||||||| ||    
T  38219749 aaga-agagctttgaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaa 38219651  T
Q  544 aaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    ||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38219650 aaacattgtaaacaccttgggtagtga-gatttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 38219563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 223 - 565
Target Start/End: Complemental strand, 43592811 - 43592459
Alignment:
Q  223 atcgtgacacgatttcaaggtgtc-gtgagctagtttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcatt 321  Q
    |||||||||||||||||||| | | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  43592811 atcgtgacacgatttcaagggggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtt 43592712  T
Q  322 aagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtgacacgatct-ggaaatcgtgacacgatttcctctgaggaagactagtatt 420  Q
    |||||||| ||| ||||||||||| ||||||||| || ||| ||||||||||||||| | |||||||||||||||||| | || ||||||| |||||||     
T  43592711 aagtatccctgataaggactggtc-taccttgggtcagacgcaaatcgtgacacgatttgggaaatcgtgacacgattgcttcggaggaaggctagtata 43592613  T
Q  421 ta-agtgttcttgtgc---------agnnnnnnnagagagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgag 510  Q
    ||  ||||||||||||          |         |||||||||| | |||||||||||||| |||||||||  |||||||||||||||| ||||||||    
T  43592612 tattgtgttcttgtgcttttttactgggagaacttaagagagcttgaatgagcttagagagag-aacttggatagcaaaggagggaaccaatgggttgag 43592514  T
Q  511 tgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  43592513 tgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 43592459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 173 - 435
Target Start/End: Original strand, 1456650 - 1456914
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||    
T  1456650 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttacaggacgccaaat 1456749  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| ||||||||||||||||||||||||||||||||||||||  |||||||||| ||| ||||||| ||| ||||||||| || | | |||||||||    
T  1456750 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgcttgttaagtatccctgataaggacttgtc-taccttgggtcagatgcaaatcgtga 1456848  T
Q  373 cacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgc 435  Q
    |||| |||  |||||||||| ||||||||| |  ||||||||||||||| ||  ||||||||||||    
T  1456849 cacggtcttgggaaatcgtggcacgatttctttagaggaagactagtatatattgtgttcttgtgc 1456914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 173 - 565
Target Start/End: Complemental strand, 15045267 - 15044865
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    |||||||||||| || ||||||||||| ||||||||||||||||||||| ||||||||||||||| | | || ||||||| |||||||||||||||||||    
T  15045267 cttcaaatttgtagtttggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatttga-gatgccgtgagccagtttgcaggacgccaaat 15045169  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||  |||| ||| |    | | |||||||    
T  15045168 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtc-aacctggggtccgttgcagatcgtga 15045070  T
Q  373 cacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgc--------agnnnnnnnagagagagcttggaaga 461  Q
    ||||||||  |||||||||| ||||||||| || | ||||||||||||| ||  ||||||||||||        ||         |||||||||| | ||    
T  15045069 cacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaagaagaacttaagagagcttgtatga 15044970  T
Q  462 gcttag-agagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttggg-ttggaaaaaacattgtaatcacc 559  Q
    |||| | |||||| |||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||    
T  15044969 gctttgtagagag-aacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttgggaaaaacattgtaatcacc 15044871  T
Q  560 ttgggt 565  Q
    ||||||    
T  15044870 ttgggt 15044865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 160 - 437
Target Start/End: Complemental strand, 18442233 - 18441954
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | || |||||||| |||||    
T  18442233 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctggtttg 18442134  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||||| | ||||  ||||||||||||||||||||   |||||||||| |||||| ||| ||| ||||||||||| |  ||||||||      
T  18442133 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtttcttgggacga 18442034  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||| |  ||||||||||||| |||||||||||||||||||||  || | ||| | |||||||||||||||||||||||||    
T  18442033 acgcaccaatcgtgacacgacctggaaatcgtgacacgattttatcagtggagggctagtatttaagtgttcttgtgcag 18441954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 160 - 437
Target Start/End: Original strand, 26177466 - 26177745
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  | || |||||||| |||||    
T  26177466 tgttgagatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 26177565  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||||| | ||||| ||||||||||||||||||||   |||||||||| |||||| ||| ||| ||||||||||| |||||||||||      
T  26177566 cagggtgccaaatcgtgacacgatcatgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacgg 26177665  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||| |  ||||||||||||| |||||||||||||||||||||  || | ||| | |||||||||||||||||||| ||||    
T  26177666 acgcaccaatcgtgacacgacctggaaatcgtgacacgattttatcagtggagggctagtatttaagtgttcttgcgcag 26177745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 160 - 437
Target Start/End: Complemental strand, 9789809 - 9789530
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  | || |||||||| |||||    
T  9789809 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 9789710  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||||| | ||||  ||||||||||||||||||||   |||||||||| |||||| ||| ||| ||||||||||| |  |||| |||      
T  9789709 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgaaaacttgctcgttaagtttccatgataaggactggtcgtttcttgcgacga 9789610  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||| |  | ||||||||||| ||| |||||||||||||||||  || | ||| | |||||||||||||||||||||||||    
T  9789609 acgcaccattcgtgacacgacctgaaaatcgtgacacgattttatcagtggagggctagtatttaagtgttcttgtgcag 9789530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 173 - 345
Target Start/End: Complemental strand, 30631936 - 30631764
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||    
T  30631936 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagccagtttgcaggacgccaaat 30631837  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtc 345  Q
    |||| | |||| |||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||    
T  30631836 cgtgacacgattttgggaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtc 30631764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 168 - 437
Target Start/End: Original strand, 25077713 - 25077983
Alignment:
Q  168 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-ttgcaggacg 266  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  | |||| ||||||||||  ||| |||       
T  25077713 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcgattgga-ggtgccgtgagctagggttgtaggggt 25077811  T
Q  267 ccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaa 366  Q
     ||||||||| | ||||  ||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||| | |||||||||  ||| |||    
T  25077812 gcaaatcgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaa 25077911  T
Q  367 tcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  25077912 tcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 25077983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 168 - 437
Target Start/End: Original strand, 25135682 - 25135952
Alignment:
Q  168 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-ttgcaggacg 266  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  | |||| ||||||||||  ||| |||       
T  25135682 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcgattgga-ggtgccgtgagctagggttgtaggggt 25135780  T
Q  267 ccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaa 366  Q
     ||||||||| | ||||  ||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||| | |||||||||  ||| |||    
T  25135781 gcaaatcgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaa 25135880  T
Q  367 tcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  25135881 tcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 25135952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 173 - 328
Target Start/End: Original strand, 29402562 - 29402717
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||  | | |||||||||||||||||||||||||    
T  29402562 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttcaagtggccatgagctagtttgcaggacgccaaat 29402661  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatc 328  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29402662 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatc 29402717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 160 - 437
Target Start/End: Original strand, 10592844 - 10593120
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||  |||| |||||| ||| |||    
T  10592844 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacga-ttccgggtgccgtgagataggttg 10592941  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  || |||||||||| |||| | || |||||||||||||||   ||||||||||| |||||||||| ||| ||||||||||| |  ||| ||   |    
T  10592942 cagggtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccgtgataaggactggtcgtttcttcggtggt 10593041  T
Q  360 acgtaaatcgtgacacgatct-ggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||| | ||||||||||||| | ||||||||||||||||||||  | ||||||||||||||| |||||||||||||||||    
T  10593042 acgcagatcgtgacacgatttgggaaatcgtgacacgatttcaacagaggaagactagtatgtaagtgttcttgtgcag 10593120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 160 - 619
Target Start/End: Original strand, 9352807 - 9353253
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| ||||||||||||||| || |||||||| ||||||||||| ||||| |||||||||||||||||||     || |||||||| |||||    
T  9352807 tgttgagatttggcttcaaatttgtggtttgaaagaacagagaaatcgtgacgcgattgtggcatcgtgacacgattttgtaatgccgtgagctggtttg 9352906  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  | ||||||||||| ||||  || |||||||||||||||||   |||||||||  |||||| | |  || ||||  ||||| ||||||||| | |    
T  9352907 cagggtgtcaaatcgtggcacgattctgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggt-tggtcgtaccttgggtcgt 9353005  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttgg 457  Q
    || ||  ||||||| |||||| |||||| |||| ||||||||  || |  ||||||| ||||||||||||||||||||||        | |||||    |    
T  9353006 acatatcaatcgtggcacgatttggaaaacgtggcacgattttatcagctgaagactggtatttaagtgttcttgtgcagatttt---gggagag----g 9353098  T
Q  458 aagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatca 557  Q
    | ||    ||||||||||||||||||||||||||||| |||   |||||| ||||||||||||| |||  |||||||||||||   ||||||||||| ||    
T  9353099 atga----agagagagaaacttggattacaaaggaggtaactttagggttaagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaaca 9353192  T
Q  558 ccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttt 619  Q
    ||||||||||||| || |||||||||||||||||| |||||||||| |||||||||||||||    
T  9353193 ccttgggtagtga-gatttcaccattggaaggatcaaaagcttccttttgtgtcttctcttt 9353253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 160 - 357
Target Start/End: Original strand, 29719965 - 29720163
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||| ||||||||||| ||    
T  29719965 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtctg 29720064  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcag-aaacttgctcattaagtatccttgacaaggactggtcttaccttgggac 357  Q
    ||||  ||||||||||| | ||||  ||||||||||||||||||||  | |||||||||| |||||| ||| ||| ||||||||||| |||||||||||    
T  29720065 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttgggac 29720163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 158 - 437
Target Start/End: Original strand, 40379676 - 40379955
Alignment:
Q  158 attgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gt 256  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||  ||||| ||||||||| |     
T  40379676 attgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgccgtgagctaggg 40379773  T
Q  257 ttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttggga 356  Q
    |||||||  || || ||||| | |||| | || |||||||||||||||   ||||||||||| |||||||||||||| ||||||||||| | ||||||||    
T  40379774 ttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttggga 40379873  T
Q  357 catacgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    |  ||| |||||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  40379874 cggacgcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 40379955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 160 - 437
Target Start/End: Original strand, 26170357 - 26170636
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    ||||||| |||| |||||||||| |||| ||||||||||||||||||||||||||| ||||| |||||||||||||||   | || |||||||| |||||    
T  26170357 tgttgagttttggcttcaaatttatggtatggaagaacagggaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggtttg 26170456  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||||| | ||||| |||||||||||||||  |||   |||||||||| |||||| ||| ||| ||||||||||| |||||||||||      
T  26170457 cagggtgccaaatcgtgacacgatcgtgggaaatcgtgacataatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacgg 26170556  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||| |  ||||||||||||| ||||| |||||||||||||||  || | ||| | |||||||||||||||||||||||||    
T  26170557 acgcaccaatcgtgacacgacctggatatcgtgacacgattttatcagtggagggctagtatttaagtgttcttgtgcag 26170636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 160 - 437
Target Start/End: Original strand, 16546216 - 16546493
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gttt 258  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||| ||  ||||| ||||||||| | ||    
T  16546216 tgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgccgtgagctagggtt 16546313  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    |||||  || || ||||| | |||| | || |||||||||||||||   ||||||||||| |||||||||||||| ||||||||||| | |||||||||     
T  16546314 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 16546413  T
Q  359 tacgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
     ||| |||||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  16546414 gacgcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 16546493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 160 - 437
Target Start/End: Original strand, 40381889 - 40382166
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gttt 258  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||| ||  ||||| ||||||||| | ||    
T  40381889 tgttgagatt-gtcttcaaatttgtggtctgaaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgccgtgagctagggtt 40381986  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    |||||  || || ||||| | |||| | || |||||||||||||||   ||||||||||| |||||||||||||| ||||||||||| | |||||||||     
T  40381987 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 40382086  T
Q  359 tacgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
     ||| |||||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  40382087 gacgcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 40382166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 159 - 345
Target Start/End: Complemental strand, 22536853 - 22536668
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagttt 258  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||| |||||||||| ||    
T  22536853 ttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggtt 22536755  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtc 345  Q
    |||||  || |||||||||| | ||  |||||||||||||||||||   ||||||||||| |||||||||||||| |||||||||||    
T  22536754 gcagggtgcaaaatcgtggcacaattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 22536668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 160 - 437
Target Start/End: Original strand, 16543994 - 16544271
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-tt 258  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||  | ||||  |||||||||  ||    
T  16543994 tgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattgga-ggtgctgtgagctagggtt 16544091  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
     ||||  || || ||||| | |||| | || |||||||||||||||   ||||||||||| |||||||||||||| ||||||||||| | |||||||||     
T  16544092 acagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 16544191  T
Q  359 tacgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
     ||| |||||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  16544192 gacgcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 16544271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 475 - 632
Target Start/End: Complemental strand, 30631730 - 30631572
Alignment:
Q  475 aacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagt-gagga 573  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  30631730 aacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtggagga 30631631  T
Q  574 gttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    |||||  | |||||||||||||||||||||||| ||| |||||| |||||||||||||||    
T  30631630 gttcattagttggaaggatctaaagcttcctctagtgacttctc-tttagggttcatatt 30631572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 365 - 629
Target Start/End: Complemental strand, 15464952 - 15464700
Alignment:
Q  365 aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttggaagagct 464  Q
    |||||||||||||| ||||||||||| ||||||||  || |  ||||||||||||||||||||||||||||||       || ||||||||| |          
T  15464952 aatcgtgacacgatttggaaatcgtggcacgattttatcagtagaagactagtatttaagtgttcttgtgcagattttggag-gagagcttgaa------ 15464860  T
Q  465 tagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttggg 564  Q
      |||||||||||||||||||||||| ||| |||   |||||||||||||||||||| |||  ||||||||||||| |||  ||| |||| |||||||||    
T  15464859 --gagagagaaacttggattacaaagaaggaaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaa--catcgtaaacaccttggg 15464764  T
Q  565 tagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat 629  Q
    ||||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  15464763 tagtgag-atttcaccattggaaggatcaaaagcttccttttgtgtcttctcttttagggttcat 15464700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 160 - 362
Target Start/End: Original strand, 16407641 - 16407843
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||   | || |||||||| |||||    
T  16407641 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgagctggtttg 16407740  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||||| | |||||||| | |||||||||||||||   |||||||||| |||||| ||| ||| |||||| |||| ||||||||||| |    
T  16407741 cagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggaccggtcgtaccttgggacgt 16407840  T
Q  360 acg 362  Q
    |||    
T  16407841 acg 16407843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 160 - 339
Target Start/End: Original strand, 29722152 - 29722332
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||  |||||||||| ||    
T  29722152 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgctgtgagctagtctg 29722251  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcag-aaacttgctcattaagtatccttgacaagga 339  Q
    || |  ||||||||||| | ||||  ||||||||||||||||||||  | |||||||||| |||||| ||| ||| |||||    
T  29722252 catggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataagga 29722332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 160 - 362
Target Start/End: Original strand, 16409077 - 16409279
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||   | ||||||||||| |||||    
T  16409077 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgtcgtgagctggtttg 16409176  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    || |  ||||||| ||| | |||||||| | |||||||||||||||   |||||||||| |||||| ||| ||| ||||||||||| ||| ||||||| |    
T  16409177 caaggtgccaaattgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtacattgggacgt 16409276  T
Q  360 acg 362  Q
    |||    
T  16409277 acg 16409279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 160 - 436
Target Start/End: Complemental strand, 29751724 - 29751467
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||  |||||||||||  |||| |||||||||| |||    
T  29751724 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgaatttggcatcacgacacgatttcgtggtgccgtgagctaggttg 29751625  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||                     |||||||||||  ||||||||||| |||||||||||||| ||||||||||| |||||||||   |    
T  29751624 cagggtgccaaatc---------------------gtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgt 29751546  T
Q  360 acgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtat-ttaagtgttcttgtgca 436  Q
    ||| ||||||||||||||| ||| |||||||||||||||| | |  ||||||| ||||||| | |||||||||||||||    
T  29751545 acgcaaatcgtgacacgatttggaaaatcgtgacacgattgctttagaggaaggctagtatataaagtgttcttgtgca 29751467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 449 - 565
Target Start/End: Original strand, 1456952 - 1457067
Alignment:
Q  449 agagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaaca 548  Q
    ||||||||||||||||||||||||||| |||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||    
T  1456952 agagcttggaagagcttagagagagaa-cttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaaca 1457050  T
Q  549 ttgtaatcaccttgggt 565  Q
    |||||||||||||||||    
T  1457051 ttgtaatcaccttgggt 1457067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 466 - 629
Target Start/End: Original strand, 36932119 - 36932279
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||| |||||||||||||   |||||||||||||||| ||| ||   ||||||||||||| |||  |||||||| ||||||||||    
T  36932119 agagagagaaacttggattgcaaaggagggaactttagggttgagtgtctttatagtgatgatctcttgggttgggaaa--cattgtaaacaccttgggt 36932216  T
Q  566 agtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat 629  Q
    |||||| | |||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  36932217 agtgag-atttcaccattggaaggatcaaaagcttcctcttgtgtcttctgttttagggttcat 36932279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 29752390 - 29752267
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  | || |||||||||| |||    
T  29752390 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgctgccgtgagctaggttg 29752291  T
Q  260 caggacgccaaatcgtggcgcgat 283  Q
    ||||  ||||||||||||| ||||    
T  29752290 cagggtgccaaatcgtggcacgat 29752267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 466 - 630
Target Start/End: Complemental strand, 14520556 - 14520396
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    |||||||||||||| |||||||||||||| |||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||| |||||||| |    
T  14520556 agagagagaaacttagattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaacaccttggat 14520459  T
Q  566 agtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcata 630  Q
    ||||| || |||||||||||||||||| |||||||||| |||||||||||| |||||||||||||    
T  14520458 agtga-gatttcaccattggaaggatcaaaagcttccttttgtgtcttctc-tttagggttcata 14520396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 160 - 435
Target Start/End: Complemental strand, 33768772 - 33768495
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gttt 258  Q
    |||||| | ||| ||||||||||||||| ||||||||||| | ||||||| | |||||| |  |||||||||||||   | | || ||||||| | ||||    
T  33768772 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcgga-gatgccgtgagccaagttt 33768674  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    || ||| || |||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||  |||| |||||     
T  33768673 gctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacctggggacc 33768575  T
Q  359 tacgtaaatcgtgacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
       | | |||||||||||||||  |||||||||| ||||||||| || | | | ||||||||||| ||||||||||||||    
T  33768574 gttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcatgactagtatttaaagtgttcttgtgc 33768495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 160 - 435
Target Start/End: Complemental strand, 33791904 - 33791627
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gttt 258  Q
    |||||| | ||| ||||||||||||||| ||||||||||| | ||||||| | |||||| |  |||||||||||||   | | || ||||||| | ||||    
T  33791904 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcgga-gatgccgtgagccaagttt 33791806  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    || ||| || |||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||  |||| |||||     
T  33791805 gctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacctggggacc 33791707  T
Q  359 tacgtaaatcgtgacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
       | | |||||||||||||||  |||||||||| ||||||||| || | | | ||||||||||| ||||||||||||||    
T  33791706 gttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgc 33791627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 160 - 435
Target Start/End: Complemental strand, 2785963 - 2785686
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gttt 258  Q
    |||||| | ||| ||||||||||||||| ||||||||||| | ||||||| | |||||| |  |||||||||||||   | | || ||||||| | ||||    
T  2785963 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcgga-gatgccgtgagccaagttt 2785865  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    || ||| || |||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||  |||| ||||      
T  2785864 gctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacctggggagc 2785766  T
Q  359 tacgtaaatcgtgacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
       | | |||||||||||||||  |||||||||| ||||||||| || | | | ||||||||||| ||||||||||||||    
T  2785765 gttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgc 2785686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 464 - 618
Target Start/End: Original strand, 24553296 - 24553448
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    ||||||| ||||||||||||||||||||||| |||  ||||||||||||||||||||| |||  |||||||||||||   ||||||||||| ||||||||    
T  24553296 ttagagaaagaaacttggattacaaaggaggtaacttaagggttgagtgtctttgtagtgaggttctcttgggttgg--gaaacattgtaaacaccttgg 24553393  T
Q  564 gtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||||| || ||||||||| ||||||||  |||||||||| |||||| |||||||    
T  24553394 gtagtga-gatttcaccattagaaggatcaaaaagcttccttttgtgttttctctt 24553448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 464 - 618
Target Start/End: Complemental strand, 28832585 - 28832433
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    ||||||||||||||||||||||||||||||| |||   || ||||||||||||||||| |||  |||||||||||||   ||||||||||| ||||||||    
T  28832585 ttagagagagaaacttggattacaaaggaggtaactttagagttgagtgtctttgtagtgaggttctcttgggttgg--gaaacattgtaaacaccttgg 28832488  T
Q  564 gtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||||| || ||||||||||||||||||  |||||||||| |||||| |||||||    
T  28832487 gtagtga-gatttcaccattggaaggatcaaaaagcttccttttgtgttttctctt 28832433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 469 - 618
Target Start/End: Original strand, 11916746 - 11916892
Alignment:
Q  469 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagt 568  Q
    |||||||||||||||||||||||||| |||   |||||||||| ||||||||| |||  |||||||||||||   ||||||||||| |||||||||||||    
T  11916746 gagagaaacttggattacaaaggaggtaactttagggttgagtttctttgtagtgaggatctcttgggttgg--gaaacattgtaaacaccttgggtagt 11916843  T
Q  569 gaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctctt 618  Q
    || || |||||||||||||||||| ||| |||||| |||||| |||||||    
T  11916844 ga-gatttcaccattggaaggatcaaaaacttccttttgtgttttctctt 11916892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 173 - 345
Target Start/End: Original strand, 28807088 - 28807260
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gtttgcaggacgccaaa 271  Q
    |||||||||| |||||||||||||||| | ||||||| ||||||||||  ||||||||||||| | | | || ||||||| | |||||||||  || |||    
T  28807088 cttcaaatttatggtctggaagaacagaggaatcgtgtcacgattttgcaatcgtgacacgatctga-gatgccgtgagccaagtttgcagggtgcaaaa 28807186  T
Q  272 tcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtc 345  Q
    ||||||| ||||||||||||||||||||||||| |||||||||| |  |||||||||  ||| |||||||||||    
T  28807187 tcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggttaagtatctctgataaggactggtc 28807260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 464 - 618
Target Start/End: Original strand, 31300364 - 31300516
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    ||||||||||||||||||||| ||||||||| |||   | |||||||||||||||||| |||  ||||||||||||  | ||||||||||| ||||||||    
T  31300364 ttagagagagaaacttggattgcaaaggaggtaactttaaggttgagtgtctttgtagtgaggttctcttgggttg--agaaacattgtaaacaccttgg 31300461  T
Q  564 gtagtgaggagttcaccattggaaggatctaaa-gcttcctcttgtgtcttctctt 618  Q
    ||||||| || |||||||||||||||||| ||| ||||||| |||||| |||||||    
T  31300462 gtagtga-gatttcaccattggaaggatcaaaaggcttccttttgtgttttctctt 31300516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 160 - 276
Target Start/End: Complemental strand, 15465125 - 15465009
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| |||||||||||||||||| |||||||| ||||||||||||||| ||||| |||||||||||||||   | || |||||||| |||||    
T  15465125 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggtttg 15465026  T
Q  260 caggacgccaaatcgtg 276  Q
    ||||  |||||||||||    
T  15465025 cagggtgccaaatcgtg 15465009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 160 - 276
Target Start/End: Original strand, 36931843 - 36931959
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||  ||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||| ||||||||   | ||||||||||| |||||    
T  36931843 tgttgagatttcgcttcaaatttgtggtttggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattttgtgatgtcgtgagctggtttg 36931942  T
Q  260 caggacgccaaatcgtg 276  Q
    ||||  |||||||||||    
T  36931943 cagggtgccaaatcgtg 36931959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 466 - 618
Target Start/End: Original strand, 11181603 - 11181753
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    |||||||||||||||| |||||||||||| |||   | |||||||||||||||||| |||  |||||||||||||   ||||||||||| ||||||||||    
T  11181603 agagagagaaacttggtttacaaaggaggtaactttatggttgagtgtctttgtagtgaggttctcttgggttgg--gaaacattgtaaacaccttgggt 11181700  T
Q  566 agtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    |||||  | ||||||||||||||||||  |||||||||| |||||| |||||||    
T  11181701 agtga-aatttcaccattggaaggatcaaaaagcttccttttgtgttttctctt 11181753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 466 - 618
Target Start/End: Original strand, 17003730 - 17003880
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||  |||   |||||||| ||||||||||| |||  ||||||||||| |   ||||||||||| ||||||||||    
T  17003730 agagagagaaacttggattacaaaggagataactttagggttgaatgtctttgtagtgaggttctcttgggtttg--gaaacattgtaaacaccttgggt 17003827  T
Q  566 agtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||| || ||||||||||||||||||  |||||||||| |||||| |||||||    
T  17003828 agtga-gatttcaccattggaaggatcaaaaagcttccttttgtgttttctctt 17003880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 167 - 344
Target Start/End: Original strand, 37560953 - 37561130
Alignment:
Q  167 atttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gtttgcaggac 265  Q
    ||||| ||||||||||||||||||||||||||| | ||||||||||||||||    ||||||||||||| | | | || ||||||| | ||||  | |      
T  37560953 atttggcttcaaatttgtggtctggaagaacagagtaatcgtgacacgatttgataatcgtgacacgatctga-gatgccgtgagccaagttttgatgga 37561051  T
Q  266 gccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggt 344  Q
    | ||||||||||| ||||||||||||||||||||||||| ||||||||||||  |||||||||  ||| ||||||||||    
T  37561052 ggcaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggt 37561130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 167 - 344
Target Start/End: Original strand, 37556131 - 37556308
Alignment:
Q  167 atttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgag-ctagtttgcaggac 265  Q
    ||||| ||||||||||||||||||||||||||| | |||||||||||||||| |  ||||||||||||| |  || || |||||| | |||||  | |      
T  37556131 atttggcttcaaatttgtggtctggaagaacagagtaatcgtgacacgatttggtaatcgtgacacgatct-gagatgccgtgagccaagttttgatgga 37556229  T
Q  266 gccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggt 344  Q
    | ||||||||||| |||||||||||||| ||||||||||  |||||||||||  |||||||||  ||| ||||||||||    
T  37556230 ggcaaatcgtggcacgatcttgggaaattgtgacacgatctagaaacttgctggttaagtatctctgataaggactggt 37556308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 159 - 435
Target Start/End: Original strand, 31396488 - 31396766
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gtt 257  Q
    ||||||| | ||| ||||||||||||||| ||| ||||||| | ||||||| |||||||| |  |||||||||||||   |  | |  |||||||| |||    
T  31396488 ttgttgaaaattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagag-gcagtgagctaagtt 31396586  T
Q  258 tgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggac 357  Q
    ||| ||| || |||||||| | |||||||||||||||||||||||||||||| ||||| |  |||||| ||  ||| |||||||||||  |||| |||||    
T  31396587 tgctggaagcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagacacttgttggttaagtttctctgataaggactggtc-aacctggggac 31396685  T
Q  358 atacgtaaatcgtgacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
        | | |||||||||||||||  || ||||||||||||||||| || | | | |||| |||||| ||||||||||||||    
T  31396686 cgttgcagatcgtgacacgatctagggtaatcgtgacacgatttcttcagggcaggacttgtatttaaagtgttcttgtgc 31396766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 464 - 592
Target Start/End: Original strand, 42127139 - 42127264
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    |||||| |||||||||||||||||||||||| |||   | |||||||| ||||||||| |||  ||||||||||||  | ||||||||||  ||||||||    
T  42127139 ttagagtgagaaacttggattacaaaggaggtaactttaaggttgagtatctttgtagtgaggttctcttgggttg--agaaacattgtatacaccttgg 42127236  T
Q  564 gtagtgaggagttcaccattggaaggatc 592  Q
    ||||||| || ||||||||||||||||||    
T  42127237 gtagtga-gatttcaccattggaaggatc 42127264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 160 - 435
Target Start/End: Original strand, 31401346 - 31401623
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gttt 258  Q
    |||||| | ||| ||||||||||||||| ||| |||| || | ||||||| |||||||| |  |||||||||||||   |  | |  |||||||| ||||    
T  31401346 tgttgaaaattggcttcaaatttgtggtttgggagaatagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagag-gcagtgagctaagttt 31401444  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    || ||| || |||||||| | ||||||||||||||||||||| ||||||||||||||||  |||||| ||  ||| |||||||||||  |||| |||||     
T  31401445 gctggaagcaaaatcgtgccacgatcttgggaaatcgtgacatgattcagaaacttgctgcttaagtttctctgataaggactggtc-aacctggggacc 31401543  T
Q  359 tacgtaaatcgtgacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
       | | |||||||||||||||  || ||||||||||||||||| || | | | |||| |||||| ||||||||||||||    
T  31401544 gttgcagatcgtgacacgatctagggtaatcgtgacacgatttcttcagggcaggacttgtatttaaagtgttcttgtgc 31401623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 469 - 610
Target Start/End: Original strand, 12083951 - 12084089
Alignment:
Q  469 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagt 568  Q
    |||||||||||||||||||||||||| |||   |||||||||||||||| ||| |||  |||||||||||||   ||||||| ||| |||||||||||||    
T  12083951 gagagaaacttggattacaaaggaggtaactttagggttgagtgtctttatagtgaggatctcttgggttgg--taaacattttaaacaccttgggtagt 12084048  T
Q  569 gaggagttcacca-ttggaaggatctaaagcttcctcttgtgt 610  Q
    || || ||||||| ||||||||||  |||||||||| ||||||    
T  12084049 ga-gaattcaccatttggaaggat-aaaagcttccttttgtgt 12084089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 462 - 618
Target Start/End: Complemental strand, 10282085 - 10281928
Alignment:
Q  462 gcttagagagagaaacttg-gattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttggaaaaaacattgtaatcac 558  Q
    |||| |||||||||||||| || ||||||||||| |||   |||||||||||||||||||| |||  |||||||  |||||  |||  |||||||| |||    
T  10282085 gctttgagagagaaacttgagaatacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagggttgtgaaa--cattgtaaacac 10281988  T
Q  559 cttgggtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    |||||||||||| || ||||||||||||||||||  ||||||| || |||||| |||||||    
T  10281987 cttgggtagtga-gatttcaccattggaaggatcaaaaagctttcttttgtgttttctctt 10281928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 502 - 618
Target Start/End: Complemental strand, 19589035 - 19588921
Alignment:
Q  502 agggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatc-taaagctt 600  Q
    |||||||||||||||||||| |||  |||||||||||||   ||||||||||| || |||||| ||||| || ||||||||||||||||||  ||| |||    
T  19589035 agggttgagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaacatcttgggcagtga-gatttcaccattggaaggatcaaaaatctt 19588939  T
Q  601 cctcttgtgtcttctctt 618  Q
    ||| |||||| |||||||    
T  19588938 ccttttgtgttttctctt 19588921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 35388246 - 35388196
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtga 210  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  35388246 tgttgagatttgacttcaaatttgtggtctggaagaacagagaaatcgtga 35388196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 31180818 - 31180773
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  31180818 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 31180773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 43592842 - 43592797
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  43592842 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 43592797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 14520855 - 14520796
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||| | ||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  14520855 ttgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 14520796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 480 - 592
Target Start/End: Original strand, 7160689 - 7160798
Alignment:
Q  480 ggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgaggagttcac 579  Q
    |||||||||| |||| |||   |||||||||||||||||||| |||  |||||||| ||||   ||||||||||||||||||||  ||||| || ||||     
T  7160689 ggattacaaatgaggtaactttagggttgagtgtctttgtagtgaggttctcttggattgg--gaaacattgtaatcaccttggacagtga-gatttcat 7160785  T
Q  580 cattggaaggatc 592  Q
    |||||||||||||    
T  7160786 cattggaaggatc 7160798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 341 - 437
Target Start/End: Original strand, 36932002 - 36932100
Alignment:
Q  341 tggtcttaccttgggacatacgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||||| ||||||||| | ||||||  ||||||||||| || || |||||||| ||||||||  || |  ||||||| ||||||||||||||||||||||    
T  36932002 tggtcgtaccttgggtcgtacgtatcaatcgtgacacaatttgaaaatcgtggcacgattttatcagctgaagactggtatttaagtgttcttgtgcag 36932100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 521 - 564
Target Start/End: Original strand, 28807436 - 28807479
Alignment:
Q  521 gagagtgtctcttgggttggaaaaaacattgtaatcaccttggg 564  Q
    |||||||| |||| |||||| |||||||||||||||||||||||    
T  28807436 gagagtgtttcttaggttgggaaaaacattgtaatcaccttggg 28807479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 601 - 632
Target Start/End: Complemental strand, 38192369 - 38192338
Alignment:
Q  601 cctcttgtgtcttctcttttagggttcatatt 632  Q
    ||||||||||||||||||||||||||||||||    
T  38192369 cctcttgtgtcttctcttttagggttcatatt 38192338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 11916452 - 11916502
Alignment:
Q  168 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    |||| ||||||||||||||| || |||||||| ||||||||||||| ||||    
T  11916452 tttggcttcaaatttgtggtttgaaagaacagagaaatcgtgacacaattt 11916502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 461 - 608
Target Start/End: Complemental strand, 3880634 - 3880486
Alignment:
Q  461 agcttagagagagaaactt-ggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttggaaaaaacattgtaatca 557  Q
    ||||| ||||||||||| | ||| ||||||||||| |||   || |||||||||| |||||| |||  |||||||  |||||  | ||||||||||| ||    
T  3880634 agctttgagagagaaacctaggaatacaaaggaggtaacttgagagttgagtgtccttgtagtgaggttctcttgagggttg--agaaacattgtaaaca 3880537  T
Q  558 ccttgggtagtgaggagttcaccattggaaggatc-taaagcttcctcttgt 608  Q
    | |||||| ||||| | ||||||||||||||||||  |||||||||| ||||    
T  3880536 cattgggttgtgag-atttcaccattggaaggatcaaaaagcttccttttgt 3880486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 12083667 - 12083708
Alignment:
Q  177 aaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    |||||| |||| ||||||||||| ||||||||||||||||||    
T  12083667 aaatttatggtttggaagaacagagaaatcgtgacacgattt 12083708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 381 - 437
Target Start/End: Original strand, 29722330 - 29722386
Alignment:
Q  381 ggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    |||||||||||||||||||  || | ||||| |  ||||||||||||||||||||||    
T  29722330 ggaaatcgtgacacgattttatcagtggaaggcatgtatttaagtgttcttgtgcag 29722386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 251; Significance: 1e-139; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 160 - 632
Target Start/End: Original strand, 19365768 - 19366240
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||   | || |||||||| |||||    
T  19365768 tgttgagatttgacttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 19365867  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||||| | ||||||||||||||||||||||||||   |||||||||| |||| | |||  || |||||| |||| ||| ||| ||| |    
T  19365868 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaattttccaggataaggacaggtcgtacattgtgacgt 19365967  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttgg 457  Q
    |||||  |||||||||||||  ||||||||||||||||||||  || | |||||||||||||||||||||||||||||||       || ||||||||||    
T  19365968 acgtaccaatcgtgacacgacttggaaatcgtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcagattttggag-gagagcttgg 19366066  T
Q  458 aagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatca 557  Q
    |||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||| |||  ||||||||||||| ||||| ||||||| ||    
T  19366067 aagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaaaatattgtaaaca 19366166  T
Q  558 ccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19366167 ccttgggtagtga-gatttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 19366240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 240 - 632
Target Start/End: Original strand, 24786904 - 24787295
Alignment:
Q  240 aggtgtcgtgagctagtttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaagga 339  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  24786904 aggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 24787003  T
Q  340 ctggtcttaccttgggacatacgtaaatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaa-gtgttcttgtgcagn 438  Q
    ||||||  |||||||| || ||| ||||||||||||||||||||||||||| ||||||| | || ||||||||||||||| ||  ||||||||||||       
T  24787004 ctggtcaaaccttgggtcagacgcaaatcgtgacacgatctggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc--t 24787101  T
Q  439 nnnnnnagagagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggtt 538  Q
          |  |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24787102 tttttgaaggagagcttggaagagcttagagagagaa-cttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggtt 24787200  T
Q  539 ggaaaaaacattgtaatcaccttgggtagtgaggagttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    || ||||||||| ||||||||||||| |||||||||||||  | |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24787201 gggaaaaacattataatcaccttgggcagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 24787295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 160 - 632
Target Start/End: Original strand, 24202251 - 24202701
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  | || |||||||| |||||    
T  24202251 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 24202350  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||                     |||||||||||||   |||||||||| |||||||||||||| ||||||||||| || ||||||||      
T  24202351 cagggtgccaaa---------------------tcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcatatcttgggacgc 24202429  T
Q  360 acgt--aaatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttgg 457  Q
    ||||  |||||||||||||||||||||||||||||||||||   || ||||||| ||||||||||||||||||||||||         ||||||||||||    
T  24202430 acgttcaaatcgtgacacgatctggaaatcgtgacacgattgtatcagaggaaggctagtatttaagtgttcttgtgcatattttg--gagagagcttgg 24202527  T
Q  458 aagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatca 557  Q
    |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24202528 aagagcttagagagagaaacttggattacaaaggagggaactttagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatca 24202627  T
Q  558 ccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    ||||||||||||| ||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24202628 ccttgggtagtga-gatctcaccattggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 24202701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 160 - 632
Target Start/End: Original strand, 19360912 - 19361364
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| |||||||||||||||||| |||||||| ||||||||||||||| ||||| |||||||||||||||   | || |||||||| |||||    
T  19360912 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggtttg 19361011  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||||| | ||||||||||||||||||||||||||   |||||||||| |||||| |||  || |||||| |||| ||||||| ||| |    
T  19361012 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacgt 19361111  T
Q  360 acgtaaatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttggaa 459  Q
    |||||                   ||||||||||||||||  || | |||||||||||||||||||||||||||||||       || ||||||||||||    
T  19361112 acgtacc-----------------aatcgtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcagattttggag-gagagcttggaa 19361193  T
Q  460 gagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcacc 559  Q
    |||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||||| |||  |||||||||||||  |||||||||||| ||||    
T  19361194 gagcttagagagagaaacttagattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgg-gaaaacattgtaaacacc 19361292  T
Q  560 ttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19361293 ttgggtagtga-gatttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 19361364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 384 - 632
Target Start/End: Original strand, 19358530 - 19358775
Alignment:
Q  384 aatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttggaagagcttagagagagaaacttggat 483  Q
    ||||||||||||||||  || | |||||||||||||||||||||||||||||||       || ||||||||||||||||||||||||||||||||||||    
T  19358530 aatcgtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcagattttggag-gagagcttggaagagcttagagagagaaacttggat 19358628  T
Q  484 tacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgaggagttcaccatt 583  Q
    |||||||||||||||   |||||||||||||||||||| |||  ||| |||||||||  |||||||||||| ||||||||||||||| || |||||||||    
T  19358629 tacaaaggagggaactctagggttgagtgtctttgtagtgaggatcttttgggttgg-gaaaacattgtaaacaccttgggtagtga-gatttcaccatt 19358726  T
Q  584 ggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19358727 ggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 19358775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 160 - 436
Target Start/End: Complemental strand, 20622821 - 20622543
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||| ||||||||||| ||    
T  20622821 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtctg 20622722  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||||| | ||||  ||||||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||| |||||||||   |    
T  20622721 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggtggt 20622622  T
Q  360 acgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtat-ttaagtgttcttgtgca 436  Q
    ||| |||||||| || ||| ||| |||||||||||| ||| | || ||||||| ||||||| | |||||||||||||||    
T  20622621 acgcaaatcgtggcatgatttggaaaatcgtgacacaattgcttcagaggaaggctagtatataaagtgttcttgtgca 20622543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 223 - 419
Target Start/End: Original strand, 24793709 - 24793905
Alignment:
Q  223 atcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcatta 322  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  24793709 atcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtta 24793808  T
Q  323 agtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtat 419  Q
    ||||||||||| |||||||||||  |||||||| || ||| ||||||||||||||||||||||||||| ||||||| | || |||||||||||||||    
T  24793809 agtatccttgataaggactggtcaaaccttgggtcagacgcaaatcgtgacacgatctggaaatcgtggcacgattgcttcagaggaagactagtat 24793905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 160 - 437
Target Start/End: Original strand, 9986785 - 9987064
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||  |||| |||||||| || ||    
T  9986785 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttgacatcgtaacacgatttcgtggtgccgtgagctggtctg 9986884  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggac-- 357  Q
    |||   ||||||||||| | |||| |||||||||||||||||||||   |||||||||| |||||| ||| | | ||||||||||| |||||||||||      
T  9986885 cagtgtgccaaatcgtgacacgattttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccataataaggactggtcataccttgggacgg 9986984  T
Q  358 atacgtaaatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    || |   |||||||||||||||||||||||||||||| ||||  || | ||| | |||||||||||||||||||||||||    
T  9986985 atgcaccaatcgtgacacgatctggaaatcgtgacacaattttatcagtggagggctagtatttaagtgttcttgtgcag 9987064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 159 - 437
Target Start/End: Original strand, 44203217 - 44203495
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-t 257  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  | |||| ||||||||||  |    
T  44203217 ttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggaatcgtgacacgattgga-ggtgccgtgagctagggt 44203314  T
Q  258 tgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggac 357  Q
    ||||||    ||||||||||| |||| | || ||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||| | |||||||||    
T  44203315 tgcaggggtgcaaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 44203414  T
Q  358 atacgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
      ||| |||||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  44203415 ggacgcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 44203495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 160 - 629
Target Start/End: Original strand, 13604095 - 13604552
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| |||||| ||||||||   | ||||||||||| |||||    
T  13604095 tgttgagatttgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggtatcgtggcacgattttgtgatgtcgtgagctggtttg 13604194  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    |||   | ||||||||| | |||| ||| | |||||||||| ||||   |||||||||  |||||| | |  || ||||  ||||| ||||||||| | |    
T  13604195 cagtgtgtcaaatcgtgacacgattttgtggaatcgtgacatgattttcaaacttgctggttaagttttcaggataaggt-tggtcgtaccttgggtcgt 13604293  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttgg 457  Q
    |||||  |||||||||||||| |||||| |||| ||||||||  || |  |||||||  ||| ||||||||||||||||        || ||||||||      
T  13604294 acgtatcaatcgtgacacgatttggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgcaaattttggag-gagagctt-- 13604390  T
Q  458 aagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatca 557  Q
    ||      |||||||||||||||||||||||||||||||||   |||||||||| ||||||||| |||  |||||||||||||   ||||||||||| ||    
T  13604391 aa------agagagagaaacttggattacaaaggagggaactttagggttgagtatctttgtagtgaggatctcttgggttgg--gaaacattgtaaaca 13604482  T
Q  558 ccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat 629  Q
    ||||||||||||| || |||||||||||||||||| |||||||||| |||||||||||| ||||||||||||    
T  13604483 ccttgggtagtga-gatttcaccattggaaggatcaaaagcttccttttgtgtcttctc-tttagggttcat 13604552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 160 - 437
Target Start/End: Original strand, 40281958 - 40282238
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||   |||| |||||||||| |||    
T  40281958 tgttgagatttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacgaatttggcatcgtgacacgatttagtggtgccgtgagctaggttg 40282057  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcag-aaacttgctcattaagtatccttgacaaggactggtcttaccttgggac- 357  Q
    ||||  ||||||||||| | ||||  ||| ||||||||||||||||  | |||||||||| |||||| ||| ||| ||||||||||| |||||||||||     
T  40282058 cagggtgccaaatcgtgacacgattgtggtaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttgggacg 40282157  T
Q  358 -atacgtaaatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
     || |   ||||||||||||||| |||||||||||||||||||  || | ||||| |  ||||||||||||||||||||||    
T  40282158 gatgcaccaatcgtgacacgatcaggaaatcgtgacacgattttatcagtggaaggcatgtatttaagtgttcttgtgcag 40282238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 168 - 435
Target Start/End: Complemental strand, 41391178 - 41390910
Alignment:
Q  168 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgc 267  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| | | || ||||||| ||||||||||||||    
T  41391178 tttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatttga-gatgccgtgagccagtttgcaggacgc 41391080  T
Q  268 caaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaat 367  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  ||| |||||||||||  |||| ||| |    | | ||    
T  41391079 caaatcgtggcacgatcttgggaaatcgtgacatgattcagaaacttgctcattaagtatcactgataaggactggtc-aacctggggtccgctgcagat 41390981  T
Q  368 cgtgacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgc 435  Q
    |||||||||||||  |||||||||| ||||||||| || | ||||||||||||| ||  ||||||||||||    
T  41390980 cgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgc 41390910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 160 - 437
Target Start/End: Original strand, 9036003 - 9036279
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||| |||||||||| |||    
T  9036003 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 9036101  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  || || ||||| | | || |||  |||||||||||||||   ||||||||||| |||||||||||||| ||||||||||| |  ||||||   |    
T  9036102 cagggtgcaaattcgtgtcactattttgttaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtgtt 9036201  T
Q  360 acgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||| | |||||||||||||  || ||||||||||||||||||  | |||||||||||||| | ||||||||||||||||    
T  9036202 acgcagatcgtgacacgattgggaaaatcgtgacacgatttcaacagaggaagactagta-taaagtgttcttgtgcag 9036279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 160 - 437
Target Start/End: Original strand, 21053540 - 21053819
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||  |||||||||  ||    
T  21053540 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgcagtgagctagaatg 21053638  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcag-aaacttgctcattaagtatccttgacaaggactggtcttaccttgggac- 357  Q
    || |  ||||||||||| | ||||  ||||||||||||||||||||  | |||||||||| |||||| ||| ||| ||||||||||| ||||||| |||     
T  21053639 caaggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttgagacg 21053738  T
Q  358 -atacgtaaatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
     || |   ||||||||||||||| |||||||||||||||||||  || | ||||| |  ||||||||||||||||||||||    
T  21053739 gatgcaccaatcgtgacacgatcaggaaatcgtgacacgattttatcagtggaaggcatgtatttaagtgttcttgtgcag 21053819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 173 - 435
Target Start/End: Original strand, 1054526 - 1054790
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gtttgcaggacgccaaa 271  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||| ||||||  | |||| ||||||| | |||||||||||||||||    
T  1054526 cttcaaatttgtggtctggaagaacagagaaatcgtgtcacgattttggaatcgtgatacgattgga-ggtgccgtgagccaagtttgcaggacgccaaa 1054624  T
Q  272 tcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtg 371  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||  |||| || ||    | | ||||||    
T  1054625 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaagtatcactgataaggactggtc-aacctgggaaccgttgcagatcgtg 1054723  T
Q  372 acacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgc 435  Q
    |||||||||  |||||||||||||||||||| || | ||| ||||||||| ||  ||||||||||||    
T  1054724 acacgatctagggaaatcgtgacacgatttcttcaggggaggactagtatatattgtgttcttgtgc 1054790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 173 - 400
Target Start/End: Complemental strand, 39446070 - 39445842
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gtttgcaggacgccaaa 271  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| | | || ||||||| | |||||||||||||||||    
T  39446070 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatttga-gatgccgtgagccaagtttgcaggacgccaaa 39445972  T
Q  272 tcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtg 371  Q
    ||||||| ||||||||||||||| ||||||||| ||||||||||||| |||||||||  ||| |||||||||||  |||| |||||    | | ||||||    
T  39445971 tcgtggcacgatcttgggaaatcatgacacgatccagaaacttgctcgttaagtatcactgataaggactggtc-aacctggggaccgttgcagatcgtg 39445873  T
Q  372 acacgatct--ggaaatcgtgacacgatttc 400  Q
    |||||||||  |||||||||| |||||||||    
T  39445872 acacgatctagggaaatcgtggcacgatttc 39445842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 158 - 378
Target Start/End: Original strand, 51764988 - 51765210
Alignment:
Q  158 attgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtt 257  Q
    |||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||  | || |||||||| |||    
T  51764988 attgttgagatttggctttaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgatttcgtgatgccgtgagctggtt 51765087  T
Q  258 tgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggac 357  Q
    ||||||  ||||||||||| | |||||||| | |||||||||||||||   |||||||||| |||||| ||| ||| ||||||||||| ||||||| |||    
T  51765088 tgcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcataccttgtgac 51765187  T
Q  358 atacgta--aatcgtgacacgat 378  Q
     ||||||  ||||||||||||||    
T  51765188 gtacgtaccaatcgtgacacgat 51765210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 173 - 400
Target Start/End: Original strand, 44023389 - 44023617
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgag-ctagtttgcaggacgccaaa 271  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||  ||||| |||||| | ||||||| ||| || |||    
T  44023389 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagccaagtttgctggatgcaaaa 44023487  T
Q  272 tcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtg 371  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||  |||| |||||    | | ||||||    
T  44023488 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc-aacctggggaccgttgcagatcgtg 44023586  T
Q  372 acacgatct--ggaaatcgtgacacgatttc 400  Q
    |||||||||  |||||||||| |||||||||    
T  44023587 acacgatctagggaaatcgtggcacgatttc 44023617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 173 - 435
Target Start/End: Original strand, 25439411 - 25439675
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gtttgcaggacgccaaa 271  Q
    ||||||||||||||||||||||||||| | |||||||||||||||| |  ||||||||||||||| | | || ||||||| | |||||||||| || |||    
T  25439411 cttcaaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgatttga-gatgccgtgagccaagtttgcaggatgcaaaa 25439509  T
Q  272 tcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtg 371  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||  |||||||||  ||| |||||||||||  |||| |||||    | | ||||||    
T  25439510 tcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggtc-aacctggggactgttgcagatcgtg 25439608  T
Q  372 acacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgc 435  Q
    |||||||||  |||||||||| ||||||||| || | ||| ||||||||||||  ||||||||||||    
T  25439609 acacgatctagggaaatcgtggcacgatttcttcaggggaggactagtatttattgtgttcttgtgc 25439675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 223 - 435
Target Start/End: Complemental strand, 41398778 - 41398565
Alignment:
Q  223 atcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcatta 322  Q
    ||||||||||||||| | | || ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41398778 atcgtgacacgatttga-gatgccgtgagccagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcatta 41398680  T
Q  323 agtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtgacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtatt 420  Q
    |||||| |||| |||||||||||  |||| ||| |    | | |||||||||||||||  |||||||||| ||||||||| || | |||||||||||||     
T  41398679 agtatcattgataaggactggtc-aacctggggtccgctgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtata 41398581  T
Q  421 ta-agtgttcttgtgc 435  Q
    ||  ||||||||||||    
T  41398580 tattgtgttcttgtgc 41398565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 173 - 435
Target Start/End: Original strand, 25444604 - 25444868
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gtttgcaggacgccaaa 271  Q
    ||||||||||||||||||||||||||| | |||||||||||||||| |  ||||||||||||||| | | || ||||||| | ||||| |||| || |||    
T  25444604 cttcaaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgatttga-gatgccgtgagccaagtttgtaggatgcaaaa 25444702  T
Q  272 tcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtg 371  Q
    ||||||| ||||||||||||||||||||||||| |||||||||| |  |||||||||  ||| |||||||||||  |||| |||||    | | ||||||    
T  25444703 tcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggttaagtatctctgataaggactggtc-aacctagggaccgttgcagatcgtg 25444801  T
Q  372 acacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgc 435  Q
    |||||||||  |||||||||| ||||||||| || | ||| ||||||||||||  ||||||||||||    
T  25444802 acacgatctagggaaatcgtggcacgatttcttcaggggaggactagtatttattgtgttcttgtgc 25444868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 469 - 618
Target Start/End: Original strand, 21536344 - 21536490
Alignment:
Q  469 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagt 568  Q
    |||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||| ||||||  |||||||||||| |||||||||||||    
T  21536344 gagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttaggttgg--aaaacattgtaaacaccttgggtagt 21536441  T
Q  569 gaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctctt 618  Q
     | || |||||||||||||||||| |||||||||| ||||||||||||||    
T  21536442 -aagatttcaccattggaaggatcgaaagcttccttttgtgtcttctctt 21536490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 469 - 618
Target Start/End: Complemental strand, 3282030 - 3281884
Alignment:
Q  469 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagt 568  Q
    ||||||||||||||||||||| |||| |||   | |||||||||||||||||| |||  ||||||||||||| |||  |||||||| |||||||||||||    
T  3282030 gagagaaacttggattacaaatgaggtaactttatggttgagtgtctttgtagtgaggatctcttgggttgggaaa--cattgtaaacaccttgggtagt 3281933  T
Q  569 gaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctctt 618  Q
    ||| | |||||||||||||||||| |||||||||| ||||||||||||||    
T  3281932 gag-atttcaccattggaaggatcaaaagcttccttttgtgtcttctctt 3281884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 466 - 619
Target Start/End: Complemental strand, 37070093 - 37069943
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||| |||   | |||||||||||||||||| |||  |||||||||||||   ||||||||||| |||||||| |    
T  37070093 agagagagaaacttggattacaaaggaggtaactttatggttgagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaacaccttggat 37069996  T
Q  566 agtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttt 619  Q
    | ||| || |||||||||||||||||| |||||||||| |||||||||||||||    
T  37069995 aatga-gatttcaccattggaaggatcaaaagcttccttttgtgtcttctcttt 37069943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 543 - 632
Target Start/End: Original strand, 19379916 - 19380004
Alignment:
Q  543 aaaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    |||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19379916 aaaacattgtaaacaccttgggtagtgag-atttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 19380004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 464 - 610
Target Start/End: Original strand, 47098594 - 47098738
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    ||||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||| ||||||||    
T  47098594 ttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagcgaggttctcttgggttgg--gaaacattgtaaacaccttgg 47098691  T
Q  564 gtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgt 610  Q
    ||||||| || ||||||||||||||||||  |||||||||| ||||||    
T  47098692 gtagtga-gatttcaccattggaaggatcaaaaagcttccttttgtgt 47098738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 447 - 565
Target Start/End: Complemental strand, 41398534 - 41398415
Alignment:
Q  447 agagagcttggaagagctta-gagagagaaacttggattacaaaggagggaaccaaa-gggttgagtgtctttgtagagagtgtctcttgggttggaaaa 544  Q
    |||||||||| | ||||||  ||||||||| |||||||  ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||    
T  41398534 agagagcttgtatgagcttttgagagagaa-cttggatagcaaaggagggaaccaaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaa 41398436  T
Q  545 aacattgtaatcaccttgggt 565  Q
    |||||||||||||||||||||    
T  41398435 aacattgtaatcaccttgggt 41398415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 466 - 618
Target Start/End: Complemental strand, 13598726 - 13598576
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||| ||||||||||||||||| |||   | |||||||||||||||||| |||  |||||||||||||   ||||||||||| ||||||||||    
T  13598726 agagagagaaaattggattacaaaggaggtaactttatggttgagtgtctttgtagtgaggatctcttgggttgg--caaacattgtaaacaccttgggt 13598629  T
Q  566 agtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||| || ||||||||||||||||||  |||||||||| |||||| |||||||    
T  13598628 agtga-gatttcaccattggaaggatcaaaaagcttccttttgtgttttctctt 13598576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 466 - 618
Target Start/End: Original strand, 26644669 - 26644818
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||  ||    |||||||||||||||||||| ||   ||| ||||||||| |||  |||||||| ||||||| ||    
T  26644669 agagagagaaacttggattacaaaggagataattttagggttgagtgtctttgtagtgaagatcttttgggttgggaaa--cattgtaaacaccttgagt 26644766  T
Q  566 agtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctctt 618  Q
    |||||| | |||||||||||||||||| |||||||||| ||||||||||||||    
T  26644767 agtgag-atttcaccattggaaggatcaaaagcttccttttgtgtcttctctt 26644818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 464 - 592
Target Start/End: Original strand, 47102608 - 47102733
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    ||||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||| ||||||||    
T  47102608 ttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgg--gaaacattgtaaacaccttgg 47102705  T
Q  564 gtagtgaggagttcaccattggaaggatc 592  Q
    ||||||| || |||| |||||||||||||    
T  47102706 gtagtga-gatttcatcattggaaggatc 47102733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 464 - 618
Target Start/End: Original strand, 27104171 - 27104322
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    ||||||||||||||||||||||||||||||| |||   | |||||||||||||||||| ||| ||||||||||||||   ||||||| ||| ||||||||    
T  27104171 ttagagagagaaacttggattacaaaggaggtaactttaaggttgagtgtctttgtagtgag-gtctcttgggttgg--gaaacattataagcaccttgg 27104267  T
Q  564 gtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||||| || |||||||||||||| |||  |||||||||| |||||| |||||||    
T  27104268 gtagtga-gatttcaccattggaagaatcaaaaagcttccttttgtgttttctctt 27104322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 468 - 618
Target Start/End: Complemental strand, 29652137 - 29651989
Alignment:
Q  468 agagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtag 567  Q
    ||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  ||| |||||||||   ||||||||||| ||||||||||||    
T  29652137 agagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatcttttgggttgg--gaaacattgtaaacaccttgggtag 29652040  T
Q  568 tgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||| || ||||||||||||||||||  |||| ||||| |||||| |||||||    
T  29652039 tga-gatttcaccattggaaggatcaaaaagtttccttttgtgttttctctt 29651989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 447 - 565
Target Start/End: Complemental strand, 41390879 - 41390760
Alignment:
Q  447 agagagcttggaagagctta-gagagagaaacttggattacaaaggagggaaccaaaggg-ttgagtgtctttgtagagagtgtctcttgggttggaaaa 544  Q
    |||||||||| | ||||||  ||||||||| |||||||  ||||||||||||||||| || |||||||||||||| |||||||||||||||||||| |||    
T  41390879 agagagcttgtatgagcttttgagagagaa-cttggatagcaaaggagggaaccaaatggattgagtgtctttgttgagagtgtctcttgggttgggaaa 41390781  T
Q  545 aacattgtaatcaccttgggt 565  Q
    |||||||||||||||||||||    
T  41390780 aacattgtaatcaccttgggt 41390760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 464 - 618
Target Start/End: Complemental strand, 32889766 - 32889616
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    ||||||||||||||||||||| ||||||||| |||   |||||||||||||||||||| |||  | | |||||||||   ||||||||||| ||||||||    
T  32889766 ttagagagagaaacttggattgcaaaggaggtaactttagggttgagtgtctttgtagtgaggtttttttgggttgg--gaaacattgtaaacaccttgg 32889669  T
Q  564 gtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctctt 618  Q
    ||||||| || ||||||||||||||| || ||||||| || |||||| |||||||    
T  32889668 gtagtga-gatttcaccattggaaggttcaaaagctt-cttttgtgttttctctt 32889616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 464 - 618
Target Start/End: Complemental strand, 9476590 - 9476438
Alignment:
Q  464 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgg 563  Q
    ||||||||||||||||||||||||||||||| |||    ||||||| ||||||||||| |||  |||||| ||||||   ||||||||||| || |||||    
T  9476590 ttagagagagaaacttggattacaaaggaggtaacttttgggttgaatgtctttgtagtgaggttctctttggttgg--gaaacattgtaaacatcttgg 9476493  T
Q  564 gtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||||| || ||||||||| ||||||||  |||||||||| |||||| |||||||    
T  9476492 gtagtga-gatttcaccatttgaaggatcaaaaagcttccttttgtgttttctctt 9476438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 462 - 618
Target Start/End: Original strand, 40816580 - 40816737
Alignment:
Q  462 gcttagagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttggaaaaaacattgtaatcac 558  Q
    |||| ||||||||||||||| | ||||||||||| |||   |||||||||||||||||||| |||  |||||||  |||||| |||  |||||||| |||    
T  40816580 gctttgagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacac 40816677  T
Q  559 cttgggtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    |||||||||||| || ||||||||||||||||||  |||||||||| |||||| |||||||    
T  40816678 cttgggtagtga-gatttcaccattggaaggatcaaaaagcttccttttgtgttttctctt 40816737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 254 - 436
Target Start/End: Original strand, 43988042 - 43988226
Alignment:
Q  254 agtttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttg 353  Q
    ||||||| ||| || |||||||| | ||||||||| ||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||  || | |    
T  43988042 agtttgctggaagcaaaatcgtgccacgatcttggtaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacttgg 43988140  T
Q  354 ggacatacgtaaatcgtgacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgca 436  Q
    ||||    | | |||||||||||||||  |||||||||| ||||||||| || | | | ||||||||||| ||||| |||||||||    
T  43988141 ggaccgttgcatatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgctcttgtgca 43988226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 467 - 618
Target Start/End: Complemental strand, 19073256 - 19073104
Alignment:
Q  467 gagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctctt--gggttggaaaaaacattgtaatcaccttgg 563  Q
    ||||||||||||||| | ||||||||||| |||   |||||||||||||||||||| |||  ||||||  |||||||   ||||||||||| ||||||||    
T  19073256 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgg--gaaacattgtaaacaccttgg 19073159  T
Q  564 gtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
     |||||| || ||||||||||||||||||  |||||||||| |||||| |||||||    
T  19073158 atagtga-gatttcaccattggaaggatcaaaaagcttccttttgtgttttctctt 19073104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 467 - 618
Target Start/End: Complemental strand, 19121146 - 19120994
Alignment:
Q  467 gagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctctt--gggttggaaaaaacattgtaatcaccttgg 563  Q
    ||||||||||||||| | ||||||||||| |||   |||||||||||||||||||| |||  ||||||  |||||||   ||||||||||| ||||||||    
T  19121146 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgg--gaaacattgtaaacaccttgg 19121049  T
Q  564 gtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
     |||||| || ||||||||||||||||||  |||||||||| |||||| |||||||    
T  19121048 atagtga-gatttcaccattggaaggatcaaaaagcttccttttgtgttttctctt 19120994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 468 - 629
Target Start/End: Complemental strand, 22819756 - 22819596
Alignment:
Q  468 agagagaaacttggatt-acaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggta 566  Q
    |||||||||||||| || |||||||||| |||   ||| || ||||||||||||| |||  |||||||||||||   ||||||||||| |||||||||||    
T  22819756 agagagaaacttgggtttacaaaggaggtaactttaggatttagtgtctttgtagtgaggttctcttgggttgg--gaaacattgtaaacaccttgggta 22819659  T
Q  567 gtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctcttttagggttcat 629  Q
    || |  | ||||||||||||||||||  |||||||||| |||||| || ||| ||||| |||||    
T  22819658 gtta-catttcaccattggaaggatcaaaaagcttccttttgtgttttttctcttaggattcat 22819596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 177 - 305
Target Start/End: Original strand, 26644390 - 26644518
Alignment:
Q  177 aaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtg 276  Q
    ||||||||||| ||||||||||| | |||||||| ||||||||| |||||| |||||||||     |||| |||||| ||||||| |  | |||||||||    
T  26644390 aaatttgtggtttggaagaacagaggaatcgtgatacgattttgtcatcgtaacacgattttgtaatgtcatgagctggtttgcacggtgtcaaatcgtg 26644489  T
Q  277 gcgcgatcttgggaaatcgtgacacgatt 305  Q
    || |||| ||| |||| ||||||||||||    
T  26644490 gcacgattttgtgaaaacgtgacacgatt 26644518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 167 - 237
Target Start/End: Original strand, 21536119 - 21536189
Alignment:
Q  167 atttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgattt 237  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||||||   || |||||||||||||    
T  21536119 atttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttcatcaacgtgacacgattt 21536189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 462 - 587
Target Start/End: Original strand, 47703699 - 47703824
Alignment:
Q  462 gcttagagagagaaacttg-gattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttggaaaaaacattgtaatcac 558  Q
    |||| |||||||||||||| || ||||||||||| |||   |||||||||||||||||||| |||  |||||||  |||||| |||  |||||||| |||    
T  47703699 gctttgagagagaaacttgagaatacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacac 47703796  T
Q  559 cttgggtagtgaggagttcaccattggaa 587  Q
    |||||||||||| || |||||||||||||    
T  47703797 cttgggtagtga-gatttcaccattggaa 47703824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 24793678 - 24793723
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  24793678 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 24793723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 528 - 618
Target Start/End: Original strand, 16124347 - 16124435
Alignment:
Q  528 tctcttgggttggaaaaaacattgtaatcaccttgggtagtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||||||||||| |||  |||||||| ||||||||||||||| || ||||||||||||||||||  |||||||||| |||||| |||||||    
T  16124347 tctcttgggttgggaaa--cattgtaaacaccttgggtagtga-gatttcaccattggaaggatcaaaaagcttccttttgtgttttctctt 16124435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 3282335 - 3282273
Alignment:
Q  156 ttattgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    |||||||||| ||||| |||||||||||||||  ||||||||||  |||||||||||||||||    
T  3282335 ttattgttgaaatttggcttcaaatttgtggttaggaagaacagaaaaatcgtgacacgattt 3282273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 41398814 - 41398764
Alignment:
Q  168 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    |||| |||||||||||||||||| |||||||| ||||||||||||||||||    
T  41398814 tttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgattt 41398764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 13599012 - 13598967
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  13599012 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 13598967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 37070378 - 37070334
Alignment:
Q  174 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||    
T  37070378 ttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 37070334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 504 - 591
Target Start/End: Original strand, 9022715 - 9022799
Alignment:
Q  504 ggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagtgaggagttcaccattggaaggat 591  Q
    |||||| ||||||||||| |||  ||||||||||||  | ||||||||||| ||||||  ||||||| || |||||||||||||||||    
T  9022715 ggttgaatgtctttgtagtgaggttctcttgggttg--agaaacattgtaaacacctttcgtagtga-gatttcaccattggaaggat 9022799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 16124197 - 16124238
Alignment:
Q  177 aaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||| ||||||||||| |||||||||| |||||||    
T  16124197 aaatttgtggtttggaagaacagagaaatcgtgatacgattt 16124238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 1192296 - 1192328
Alignment:
Q  206 cgtgacacgattttggcatcgtgacacgatttc 238  Q
    ||||| |||||||||||||||||||||||||||    
T  1192296 cgtgatacgattttggcatcgtgacacgatttc 1192328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 236; Significance: 1e-130; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 159 - 632
Target Start/End: Original strand, 17430 - 17884
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagttt 258  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  | || |||||||| ||||    
T  17430 ttgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggttt 17529  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    |||||  ||||||||||| | ||||||||||||||||||||| ||||   |||||||||| |||||||||||||| ||||| ||||| ||||||| |||     
T  17530 gcagggtgccaaatcgtgacacgatcttgggaaatcgtgacatgattttcaaacttgctcgttaagtatccttgataaggattggtcgtaccttgtgacg 17629  T
Q  359 tacgtaaatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttgga 458  Q
    |||||              ||    ||||||||||||||||  || | ||||| |||||||||||||||||||||||||       || |||||||||||    
T  17630 tacgt--------------tcc---aatcgtgacacgattttatcagtggaaggctagtatttaagtgttcttgtgcagattttgaag-gagagcttgga 17711  T
Q  459 agagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcac 558  Q
    ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||    
T  17712 agagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaatcac 17811  T
Q  559 cttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17812 cttgggtagtga-gatttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 17884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 448 - 632
Target Start/End: Original strand, 23794 - 23977
Alignment:
Q  448 gagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaac 547  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||  ||||||||||||| ||||||    
T  23794 gagagcttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaaaac 23893  T
Q  548 attgtaatcaccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 632  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23894 attgtaatcaccttgggtagtga-gatttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 23977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 159; Significance: 2e-84; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 173 - 565
Target Start/End: Original strand, 34566 - 34967
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||  | ||| || | ||||||| ||||||||||    
T  34566 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacactatttcaagtggccgttagtttgtttgcatgacgccaaat 34665  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||  ||| ||||||| ||| ||||||||| |    | | |||||||    
T  34666 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccgttgcagatcgtga 34764  T
Q  373 cacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgc--------agnnnnnnnagagagagcttggaaga 461  Q
    ||||||||  |||||||||| ||| ||||| || ||||||||||||||| ||  |||||||| |||        ||         |||||||||| | ||    
T  34765 cacgatctagggaaatcgtggcactatttcttcagaggaagactagtatatattgtgttcttttgcttttttgaagtgaatcttaagagagcttgtatga 34864  T
Q  462 gcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcacctt 561  Q
    |||||||||||| |||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |  |||||||||||||||||||    
T  34865 gcttagagagag-aacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttgggaaaacattgtaatcacctt 34963  T
Q  562 gggt 565  Q
    ||||    
T  34964 gggt 34967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 157; Significance: 4e-83; HSPs: 3)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 156 - 437
Target Start/End: Complemental strand, 11757 - 11475
Alignment:
Q  156 ttattgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctag 255  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| | || |||||||| |    
T  11757 ttattgttgagatttggcttcaaaattgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctgg 11658  T
Q  256 tttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttggg 355  Q
    ||||||||  ||||||||||| | |||| |||||||||||||||||||||   |||||||||| |||||| ||| ||| ||||||||||| |||||||||    
T  11657 tttgcagggtgccaaatcgtgacacgat-ttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttggg 11559  T
Q  356 acatacgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    || |||| |  |||||||||||||||||||||||||||||||||||  || | ||||| |||||||||||||||||||||||||    
T  11558 acgtacgcaccaatcgtgacacgatctggaaatcgtgacacgattttatcagtggaaggctagtatttaagtgttcttgtgcag 11475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 160 - 378
Target Start/End: Complemental strand, 9308 - 9089
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  | || |||||||| |||||    
T  9308 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 9209  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||  ||||||||||| |  ||| |||||||||||||||||||||   |||||||||| |||||| ||| ||| ||||||||||| ||||||||||| |    
T  9208 cagggtgccaaatcgtgacatgat-ttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacgt 9110  T
Q  360 acgta--aatcgtgacacgat 378  Q
    ||| |  ||||||||||||||    
T  9109 acgcaccaatcgtgacacgat 9089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 9102 - 9049
Alignment:
Q  384 aatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||||||||||||||||  || | ||||| |||||||||||||||||||||||||    
T  9102 aatcgtgacacgattttatcagtggaaggctagtatttaagtgttcttgtgcag 9049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 141; Significance: 1e-73; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 173 - 565
Target Start/End: Original strand, 3349 - 3754
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaat 272  Q
    |||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||  | |||||||||||||| ||||||||||||    
T  3349 cttcaaatttgtggtctggaagaaaagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtgagctagtttgaaggacgccaaat 3448  T
Q  273 cgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgtga 372  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||  ||| ||||||| |||  |||| |||||    | | |||||||    
T  3449 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcaatgataaggactagtc-aacctggggaccgttgcagatcgtga 3547  T
Q  373 cacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattta-agtgttcttgtgc----------agnnnnnnnagagagagcttggaa 459  Q
    ||||||||  | |||||||||||||||||| || | ||||||||||||| ||  || |||||||||          ||         |||||| ||| |     
T  3548 cacgatctaggaaaatcgtgacacgatttcttcaggggaagactagtatatattgtattcttgtgcttttttttgtagaagaacttaagagagattgtat 3647  T
Q  460 gagcttag-agagagaaacttggattacaaaggagggaaccaaa-gggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatca 557  Q
    |||||| | |||||| |||||||||  ||||||||||||||||| ||||||||||||||||| ||||||||||||| |||| | ||||||||||||||||    
T  3648 gagctttgtagagag-aacttggatagcaaaggagggaaccaaatgggttgagtgtctttgttgagagtgtctcttaggttaggaaaaacattgtaatca 3746  T
Q  558 ccttgggt 565  Q
    ||||||||    
T  3747 ccttgggt 3754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 132; Significance: 3e-68; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 160 - 437
Target Start/End: Complemental strand, 3185 - 2908
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-tt 258  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  | || ||||||||||  ||    
T  3185 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcg-gatgccgtgagctagggtt 3088  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    |||||    ||||||||||| ||||  ||||||||||||||||||| ||||||||||||| |||||||| ||||| ||||||||||| | |||||||||     
T  3087 gcaggggtgcaaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtattcttgataaggactggtcgttccttgggacg 2988  T
Q  359 tacgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
     ||| |||||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  2987 gacgcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 2908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 131; Significance: 1e-67; HSPs: 5)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 160 - 629
Target Start/End: Original strand, 132752 - 133209
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| |||||| ||||||||   | ||||||||||| |||||    
T  132752 tgttgagatttgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggtatcgtggcacgattttgtgatgtcgtgagctggtttg 132851  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    |||   | ||||||||| | |||| ||| | |||||||||| ||||   |||||||||  |||||| | |  || ||||  ||||| ||||||||| | |    
T  132852 cagtgtgtcaaatcgtgacacgattttgtggaatcgtgacatgattttcaaacttgctggttaagttttcaggataaggt-tggtcgtaccttgggtcgt 132950  T
Q  360 acgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttgg 457  Q
    |||||  |||||||||||||| |||||| |||| ||||||||  || |  |||||||  ||| ||||||||||||||||        || ||||||||      
T  132951 acgtatcaatcgtgacacgatttggaaaacgtggcacgattttatcagctgaagactgctatataagtgttcttgtgcaaattttggag-gagagctt-- 133047  T
Q  458 aagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatca 557  Q
    ||      |||||||||||||||||||||||||||||||||   |||||||||| ||||||||| |||  |||||||||||||   ||||||||||| ||    
T  133048 aa------agagagagaaacttggattacaaaggagggaactttagggttgagtttctttgtagtgaggatctcttgggttgg--gaaacattgtaaaca 133139  T
Q  558 ccttgggtagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat 629  Q
    ||||||||||||| || |||||||||||||||||| |||||||||| |||||||||||| ||||||||||||    
T  133140 ccttgggtagtga-gatttcaccattggaaggatcaaaagcttccttttgtgtcttctc-tttagggttcat 133209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 466 - 618
Target Start/End: Complemental strand, 6011 - 5861
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||| ||||||||||||||||| |||   | |||||||||||||||||| |||  |||||||||||||   ||||||||||| ||||||||||    
T  6011 agagagagaaaattggattacaaaggaggtaactttatggttgagtgtctttgtagtgaggatctcttgggttgg--caaacattgtaaacaccttgggt 5914  T
Q  566 agtgaggagttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 618  Q
    ||||| || ||||||||||||||||||  |||||||||| |||||| |||||||    
T  5913 agtga-gatttcaccattggaaggatcaaaaagcttccttttgtgttttctctt 5861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 466 - 610
Target Start/End: Complemental strand, 2819 - 2678
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||| ||||||||||||  ||| |||   |||||| ||| ||||||||| |||  ||||||||||||| |||  |||||||| ||||||| ||    
T  2819 agagagagaaa-ttggattacaaaaaaggtaactttagggttaagtttctttgtagtgaggatctcttgggttgggaaa--cattgtaaacaccttgcgt 2723  T
Q  566 agtgaggagttcaccattggaaggatc-taaagcttcctcttgtgt 610  Q
    ||||| || ||||||||||||||||||  |||||||||| ||||||    
T  2722 agtga-gatttcaccattggaaggatcaaaaagcttccttttgtgt 2678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 6297 - 6252
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  6297 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 6252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 3105 - 3060
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||||    
T  3105 cttcaaatttgtggtttggaagaacagagaaatcatgacacgattt 3060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 128; Significance: 8e-66; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 160 - 437
Target Start/End: Complemental strand, 4310 - 4033
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-tt 258  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| | |||| ||||||||||  ||    
T  4310 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacgatttta-ggtgccgtgagctagggtt 4213  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    |||||    ||||||||||| ||||  ||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||| | |||||||||     
T  4212 gcaggggtgcaaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 4113  T
Q  359 tacgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
     ||| |||||||||||| ||  || ||||||||||||||||    | |||||||||||||| |||||||||| |||||||    
T  4112 gacgcaaatcgtgacacaattgggaaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcctgtgcag 4033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 126; Significance: 1e-64; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 160 - 378
Target Start/End: Original strand, 21939 - 22159
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    ||||||||||||  |||||||||||||||||||||||||| ||||||| |||| || |||||||||||||||||||||| ||||| ||||||||||||||    
T  21939 tgttgagatttggtttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgatttcgaggtgccgtgagctagtttg 22038  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacat 359  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||   |||||||||| |||||||||  ||| |||||| |||| ||||||| ||| |    
T  22039 caggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattgtaaaacttgctcgttaagtatcactgataaggacaggtcgtaccttgtgacgt 22138  T
Q  360 acgta--aatcgtgacacgat 378  Q
    |||||  ||||||||||||||    
T  22139 acgtaccaatcgtgacacgat 22159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 108; Significance: 7e-54; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 201 - 437
Target Start/End: Original strand, 523 - 761
Alignment:
Q  201 gaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgaca 300  Q
    ||||||||||||||| ||||||||||||||||||||||  | || ||||||||||||||||||  ||||||||||| | |||||||| | ||||||||||    
T  523 gaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctagtttgcagggtgccaaatcgtgacacgatcttgaggaatcgtgaca 622  T
Q  301 cgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgta--aatcgtgacacgatctggaaatcgtgacacgatt 398  Q
    |||||   ||| |||||| |||||| |||  || | ||||||||| ||||||| ||| ||||||  ||| |||||||||| |||||||||||||||||||    
T  623 cgattttcaaatttgctcgttaagtttccaggatagggactggtcgtaccttgtgacgtacgtaccaattgtgacacgatttggaaatcgtgacacgatt 722  T
Q  399 tcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    |  || | |||||||||||||||||||||||||||||||    
T  723 ttatcagtggaagactagtatttaagtgttcttgtgcag 761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 105; Significance: 4e-52; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 160 - 437
Target Start/End: Original strand, 5859 - 6137
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagt-tt 258  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||  | |||| ||||||||||  ||    
T  5859 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggagtcgtgacacgattgga-ggtgccgtgagctagggtt 5956  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaa-tcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggac 357  Q
    |||||  || || ||||| | ||||  ||| ||| ||||||||||||   ||||||||||| |||||||||||||| ||||||||||| | |||||||||    
T  5957 gcagggtgcaaattcgtgtcacgattgtggcaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 6056  T
Q  358 atacgtaaatcgtgacacgatctgg-aaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
      ||| |||||||||||||||  || ||||||||||||||||    | |||||||||||||| ||||||||||||||||||    
T  6057 ggacgcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 6137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 104; Significance: 2e-51; HSPs: 3)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 167 - 629
Target Start/End: Original strand, 43441 - 43891
Alignment:
Q  167 atttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacg 266  Q
    ||||| |||||||||| |||| |||||||| || ||||||||||||||||| |||||||||||||||||||     ||||||||||| |||| ||||  |    
T  43441 atttggcttcaaatttatggtttggaagaatagagaaatcgtgacacgattgtggcatcgtgacacgattttgtaatgtcgtgagctggtttacagggtg 43540  T
Q  267 ccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgta-- 364  Q
     ||||||||||  |||| ||| |||||||||||| ||||   |||||||||  |||||| | |  || ||||  ||||| ||||||||| | || |||      
T  43541 tcaaatcgtggtacgattttgtgaaatcgtgacatgattttcaaacttgctggttaagttttcaggataaggt-tggtcgtaccttgggtcgtatgtatc 43639  T
Q  365 aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcagnnnnnnnagagagagcttggaagagct 464  Q
    ||||||| |||||| |||||| |||| ||||||||  || |  ||| |||  ||| |||||||| ||||||||       || ||||||| |||||||      
T  43640 aatcgtggcacgatttggaaaacgtggcacgattttatcagctgaatactgctatataagtgtttttgtgcagattttggag-gagagct-ggaagag-- 43735  T
Q  465 tagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttggg 564  Q
         ||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  ||| |||||||||   ||||||||||| |||||||||    
T  43736 -----agagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatcttttgggttgg--gaaacattgtaaacaccttggg 43828  T
Q  565 tagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat 629  Q
    |||||| || |||||||||||||||||| |||||||||| |||||||||||| ||||||||||||    
T  43829 tagtga-gatttcaccattggaaggatcaaaagcttccttttgtgtcttctc-tttagggttcat 43891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 466 - 629
Target Start/End: Original strand, 36603 - 36762
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||||||||||  |||||||||||| ||||||||||    
T  36603 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgg--aaaacattgtaaacaccttgggt 36700  T
Q  566 agtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat 629  Q
    ||||| || |||||||||||||||||| |||||||||| |||||||||||| ||||||||||||    
T  36701 agtga-gatttcaccattggaaggatcaaaagcttccttttgtgtcttctc-tttagggttcat 36762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 36322 - 36384
Alignment:
Q  158 attgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 220  Q
    |||||||| | ||| ||||||||||||||| ||||||||||| |||||| ||| |||||||||    
T  36322 attgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcatgatacgattttg 36384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 97; Significance: 2e-47; HSPs: 3)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 466 - 629
Target Start/End: Original strand, 8188 - 8348
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    |||||||||||||||||||||||||||||||||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||| ||||||||||    
T  8188 agagagagaaacttggattacaaaggagggaactttagggttgagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaacaccttgggt 8285  T
Q  566 agtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat 629  Q
    ||||| || |||||||||||||||||  |||||||||| |||||||||||||||||||||||||    
T  8286 agtga-gatttcaccattggaaggattaaaagcttccttttgtgtcttctcttttagggttcat 8348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 160 - 276
Target Start/End: Original strand, 7911 - 8027
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||||||||| |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||   | || |||||| | |||||    
T  7911 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagttggtttg 8010  T
Q  260 caggacgccaaatcgtg 276  Q
    ||||  |||||||||||    
T  8011 cagggtgccaaatcgtg 8027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 437
Target Start/End: Original strand, 8070 - 8168
Alignment:
Q  341 tggtcttaccttgggacatacgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgcag 437  Q
    ||||| ||||||||| | ||||||  |||||||||||||| || |||||||| || |||||  || |  ||||||| |||||||||||||| |||||||    
T  8070 tggtcgtaccttgggtcgtacgtatcaatcgtgacacgatttgaaaatcgtggcatgattttatcagctgaagactggtatttaagtgttcgtgtgcag 8168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 173 - 345
Target Start/End: Complemental strand, 933 - 761
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gtttgcaggacgccaaa 271  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||  | |||| ||||||| | |||||| ||| || |||    
T  933 cttcaaatttgtggtatggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattgga-ggtgccgtgagccaagtttgctggatgcaaaa 835  T
Q  272 tcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtc 345  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||    
T  834 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 83; Significance: 5e-39; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 223 - 341
Target Start/End: Complemental strand, 8230 - 8112
Alignment:
Q  223 atcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcatta 322  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||    
T  8230 atcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgtta 8131  T
Q  323 agtatccttgacaaggact 341  Q
    ||||||  ||| |||||||    
T  8130 agtatcactgataaggact 8112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 8261 - 8216
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 218  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  8261 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 8216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 72; Significance: 2e-32; HSPs: 3)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 466 - 619
Target Start/End: Complemental strand, 45525 - 45374
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtcttt-gtagagagtgtctcttgggttggaaaaaacattgtaatcaccttggg 564  Q
    ||||||||||||||||||||||||||||| |||   |||||||| ||||||| |||| |||  ||||||||||||  |||  |||||||| |||||||||    
T  45525 agagagagaaacttggattacaaaggaggtaactttagggttgaatgtcttttgtagtgaggatctcttgggttgtgaaa--cattgtaaacaccttggg 45428  T
Q  565 tagtgaggagttcaccattggaaggatctaaagcttcctcttgtgtcttctcttt 619  Q
    ||||||| | |||||||||||||||||| |||||||||| |||||||||||||||    
T  45427 tagtgag-atttcaccattggaaggatcaaaagcttccttttgtgtcttctcttt 45374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 45805 - 45744
Alignment:
Q  159 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 220  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||| ||||||    
T  45805 ttgttgagatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacaattttg 45744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 243 - 436
Target Start/End: Complemental strand, 45740 - 45546
Alignment:
Q  243 tgtcgtgagctagtttgcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactg 342  Q
    |||||||||||  ||||||||  | ||||||||||| ||||  || |||||||||||||||||   |||||||||   ||||| | |  || ||||  ||    
T  45740 tgtcgtgagctgatttgcagggtgtcaaatcgtggcacgattctgtgaaatcgtgacacgattttcaaacttgctggctaagttttcaggataaggt-tg 45642  T
Q  343 gtcttaccttgggacatacgta--aatcgtgacacgatctggaaatcgtgacacgatttcctctgaggaagactagtatttaagtgttcttgtgca 436  Q
    ||| ||||||||| | ||| ||  |||||||||||||| |||||| |||| ||||||||  || |  ||||| | |||||||||||||||||||||    
T  45641 gtcgtaccttgggtcgtacatatcaatcgtgacacgatttggaaaacgtggcacgattttatcagctgaagattggtatttaagtgttcttgtgca 45546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 173 - 435
Target Start/End: Original strand, 1751 - 2015
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtc-gtgagcta-gtttgcaggacgccaa 270  Q
    ||||||||| ||||| ||||||||||| | ||||||| |||||||| |  |||||||||||||  |  || | | |||||| | |||||| ||| || ||    
T  1751 cttcaaattagtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat--cggggaggcagtgagccaagtttgctggaagcaaa 1848  T
Q  271 atcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgt 370  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||  |||||| ||  ||| |||||||||||  ||||||||||    | | |||||    
T  1849 atcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtc-aaccttgggaccgttgcagatcgt 1947  T
Q  371 gacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtat-ttaagtgttcttgtgc 435  Q
    ||||||||||  |||||||||||||||||||| || | | | ||||||||| | ||||||||||||||    
T  1948 gacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 2015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 173 - 435
Target Start/End: Original strand, 13796 - 14060
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtc-gtgagcta-gtttgcaggacgccaa 270  Q
    ||||||||| ||||| ||| ||||||| | ||||||| ||||||||||   ||||||||||||  || || | | |||||||| |||||| ||| || ||    
T  13796 cttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgat--cagggaggcagtgagctaagtttgctggaagcaaa 13893  T
Q  271 atcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgt 370  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||  || | |||||    | | |||||    
T  13894 atcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacttggggaccgttgcagatcgt 13992  T
Q  371 gacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
    ||||||||||  |||||||||| |||||||||||| |   | ||||||||||| ||||||||||||||    
T  13993 gacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgc 14060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 160 - 435
Target Start/End: Original strand, 18663 - 18940
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagcta-gttt 258  Q
    |||||| | ||| ||||||||||||||| ||| ||||||| | ||||||| | |||||| |  |||||||||||||   |  | |  |||||||| ||||    
T  18663 tgttgaaaattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcggagag-gcagtgagctaagttt 18761  T
Q  259 gcaggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggaca 358  Q
    || ||| || |||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| || |||||||| | ||| |||||     
T  18762 gctggaagcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaagactggtcat-cctggggacc 18860  T
Q  359 tacgtaaatcgtgacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
       | |||||||||||||||||  |||||||||| ||||||||| || | | | ||||| ||||| ||||||||||||||    
T  18861 gttgcaaatcgtgacacgatctaaggaaatcgtggcacgatttcttcagggcaggactaatatttaaagtgttcttgtgc 18940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 173 - 435
Target Start/End: Original strand, 148456 - 148720
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtc-gtgagcta-gtttgcaggacgccaa 270  Q
    ||||||||| ||||| ||||||||||| | ||||||| |||||||| |  |||||||||||||  |  || | | |||||| | |||||| ||| || ||    
T  148456 cttcaaattagtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat--cggggaggcagtgagccaagtttgctggaagcaaa 148553  T
Q  271 atcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgt 370  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||  |||||| ||  ||| |||||||||||  ||||||||||    | | |||||    
T  148554 atcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtc-aaccttgggaccgttgcagatcgt 148652  T
Q  371 gacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtat-ttaagtgttcttgtgc 435  Q
    ||||||||||  |||||||||||||||||||| || | | | ||||||||| | ||||||||||||||    
T  148653 gacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 148720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 173 - 435
Target Start/End: Original strand, 176462 - 176726
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtc-gtgagcta-gtttgcaggacgccaa 270  Q
    ||||||||| ||||| ||| ||||||| | ||||||| ||||||||||   ||||||||||||  || || | | |||||||| |||||| ||| || ||    
T  176462 cttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgat--cagggaggcagtgagctaagtttgctggaagcaaa 176559  T
Q  271 atcgtggcgcgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgacaaggactggtcttaccttgggacatacgtaaatcgt 370  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||  ||| |||||||||||  || ||||| |    | | |||||    
T  176560 atcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aactttgggtccgttgcagatcgt 176658  T
Q  371 gacacgatct--ggaaatcgtgacacgatttcctctgaggaagactagtattt-aagtgttcttgtgc 435  Q
    ||||||||||  |||||||||| |||||||||||| |   | ||||||||||| ||||||||||||||    
T  176659 gacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgc 176726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 469 - 610
Target Start/End: Complemental strand, 86006 - 85868
Alignment:
Q  469 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggtagt 568  Q
    |||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||| ||| |||||||||    
T  86006 gagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgg--gaaacattgtaaacactttgggtagt 85909  T
Q  569 gaggagttcaccattggaaggatctaaagcttcctcttgtgt 610  Q
    || || |||||||||||||||||| ||| |||||| ||||||    
T  85908 ga-gatttcaccattggaaggatcaaaaacttccttttgtgt 85868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 160 - 305
Target Start/End: Original strand, 1083 - 1228
Alignment:
Q  160 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgtcgtgagctagtttg 259  Q
    |||||| ||||| ||||||||||||||| || ||||||||  ||||||||||||||||||||||||||||||||||||     | ||||||| | |||||    
T  1083 tgttgaaatttgccttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattttgtaatatcgtgagttggtttg 1182  T
Q  260 caggacgccaaatcgtggcgcgatcttgggaaatcgtgacacgatt 305  Q
    ||||  | ||||||||||  |||| ||| |||||||||||||||||    
T  1183 cagggtgtcaaatcgtggtacgattttgtgaaatcgtgacacgatt 1228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 1721 - 1784
Alignment:
Q  173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtgacacgatt 236  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  1721 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 1784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 462 - 592
Target Start/End: Complemental strand, 11064 - 10934
Alignment:
Q  462 gcttagagagagaaactt-ggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttggaaaaaacattgtaatcac 558  Q
    |||| ||||||||||||| ||| ||||||||||| |||   | |||||||||||||||||| |||  |||||||  |||||| |||  |||||||| |||    
T  11064 gctttgagagagaaactttggaatacaaaggaggtaactttatggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacac 10967  T
Q  559 cttgggtagtgaggagttcaccattggaaggatc 592  Q
    |||||||||||| || ||||||||||||||||||    
T  10966 cttgggtagtga-gatttcaccattggaaggatc 10934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 466 - 571
Target Start/End: Complemental strand, 23859 - 23755
Alignment:
Q  466 agagagagaaacttg-gattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttggg 564  Q
    ||||||||||||||| |||||||| ||||| |||   | ||||||| |||||| ||| |||  ||| |||||||||||||||  ||||||||||||||||    
T  23859 agagagagaaacttgagattacaatggaggtaactttaaggttgagcgtctttatagtgaggttctattgggttggaaaaaa--ttgtaatcaccttggg 23762  T
Q  565 tagtgag 571  Q
    |||||||    
T  23761 tagtgag 23755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 466 - 571
Target Start/End: Complemental strand, 17577 - 17474
Alignment:
Q  466 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggaaaaaacattgtaatcaccttgggt 565  Q
    |||||||||| ||||||||||| |||||| |||   | |||||||||||||||||| |    |||||||| ||||   ||||||||||| ||||||||||    
T  17577 agagagagaaccttggattacataggaggtaactttacggttgagtgtctttgtagtggagatctcttggattgg--gaaacattgtaaacaccttgggt 17480  T
Q  566 agtgag 571  Q
    ||||||    
T  17479 agtgag 17474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 6750 - 6784
Alignment:
Q  203 aatcgtgacacgattttggcatcgtgacacgattt 237  Q
    |||||||||||||||||||||||||| ||||||||    
T  6750 aatcgtgacacgattttggcatcgtggcacgattt 6784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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