View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2655_low_51 (Length: 234)

Name: NF2655_low_51
Description: NF2655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2655_low_51
NF2655_low_51
[»] chr2 (21 HSPs)
chr2 (26-177)||(44551588-44551742)
chr2 (185-234)||(1102503-1102552)
chr2 (185-234)||(34224382-34224431)
chr2 (185-234)||(3518908-3518957)
chr2 (185-234)||(12969967-12970016)
chr2 (186-234)||(23366790-23366838)
chr2 (185-234)||(37673965-37674014)
chr2 (185-234)||(39938170-39938219)
chr2 (185-223)||(1646526-1646564)
chr2 (185-223)||(22388138-22388176)
chr2 (185-223)||(23367028-23367066)
chr2 (185-226)||(34222058-34222099)
chr2 (185-213)||(2183191-2183219)
chr2 (185-213)||(5405230-5405258)
chr2 (185-213)||(7608283-7608311)
chr2 (185-213)||(8042256-8042284)
chr2 (185-213)||(11841593-11841621)
chr2 (185-213)||(19141066-19141094)
chr2 (185-213)||(19141300-19141328)
chr2 (185-213)||(39358146-39358174)
chr2 (185-213)||(44365391-44365419)
[»] scaffold0257 (2 HSPs)
scaffold0257 (185-234)||(23467-23516)
scaffold0257 (185-226)||(23872-23913)
[»] chr8 (36 HSPs)
chr8 (185-234)||(8697902-8697951)
chr8 (185-234)||(27034997-27035046)
chr8 (185-234)||(41307965-41308014)
chr8 (185-234)||(45278705-45278754)
chr8 (185-234)||(3585451-3585500)
chr8 (185-234)||(10646592-10646641)
chr8 (185-234)||(40486457-40486506)
chr8 (185-234)||(40918957-40919006)
chr8 (185-234)||(43275625-43275674)
chr8 (185-234)||(2540159-2540208)
chr8 (185-234)||(7146913-7146962)
chr8 (185-234)||(11174451-11174500)
chr8 (185-234)||(11646553-11646602)
chr8 (185-234)||(40058531-40058580)
chr8 (185-226)||(41305762-41305803)
chr8 (185-229)||(37345571-37345615)
chr8 (185-227)||(36068080-36068122)
chr8 (185-226)||(45278013-45278053)
chr8 (185-223)||(7147152-7147190)
chr8 (185-223)||(11646325-11646363)
chr8 (185-223)||(30999524-30999562)
chr8 (192-234)||(30999749-30999791)
chr8 (185-223)||(36068319-36068357)
chr8 (185-223)||(40058303-40058341)
chr8 (185-223)||(40918731-40918769)
chr8 (185-223)||(43275399-43275437)
chr8 (185-213)||(132017-132045)
chr8 (185-213)||(616783-616811)
chr8 (185-213)||(617017-617045)
chr8 (185-213)||(623176-623204)
chr8 (185-213)||(623410-623438)
chr8 (185-217)||(5878317-5878349)
chr8 (185-213)||(14237514-14237542)
chr8 (185-229)||(20546520-20546564)
chr8 (185-213)||(40494618-40494646)
chr8 (185-213)||(42587482-42587510)
[»] chr7 (27 HSPs)
chr7 (185-234)||(25060137-25060186)
chr7 (185-234)||(2911552-2911601)
chr7 (185-234)||(10981508-10981557)
chr7 (185-234)||(27813811-27813860)
chr7 (187-234)||(36453352-36453399)
chr7 (185-234)||(25614579-25614628)
chr7 (185-234)||(40348960-40349009)
chr7 (185-234)||(47110451-47110500)
chr7 (191-226)||(25059456-25059491)
chr7 (185-226)||(2910859-2910900)
chr7 (185-223)||(27814050-27814088)
chr7 (185-223)||(40349200-40349238)
chr7 (185-213)||(16778505-16778533)
chr7 (185-213)||(20885103-20885131)
chr7 (185-213)||(25566548-25566576)
chr7 (185-213)||(28061515-28061543)
chr7 (185-213)||(28061749-28061777)
chr7 (185-213)||(36623308-36623336)
chr7 (185-213)||(36623542-36623570)
chr7 (185-213)||(38852081-38852109)
chr7 (185-213)||(41897988-41898016)
chr7 (185-213)||(41898222-41898250)
chr7 (185-213)||(42877386-42877414)
chr7 (185-213)||(46103370-46103398)
chr7 (185-213)||(46103597-46103625)
chr7 (185-213)||(47156027-47156055)
chr7 (185-213)||(47156261-47156289)
[»] chr6 (28 HSPs)
chr6 (185-230)||(15064926-15064971)
chr6 (185-234)||(1605579-1605628)
chr6 (185-234)||(7761301-7761350)
chr6 (185-234)||(17942443-17942492)
chr6 (185-226)||(19996322-19996363)
chr6 (185-234)||(19996719-19996768)
chr6 (185-234)||(29260192-29260241)
chr6 (185-234)||(4129435-4129484)
chr6 (185-234)||(8626482-8626531)
chr6 (191-234)||(30734836-30734879)
chr6 (192-234)||(30734711-30734753)
chr6 (185-226)||(13757208-13757249)
chr6 (185-223)||(1605817-1605855)
chr6 (185-223)||(7761539-7761577)
chr6 (185-223)||(8626721-8626759)
chr6 (185-223)||(29260431-29260469)
chr6 (185-213)||(4147931-4147959)
chr6 (185-213)||(18668688-18668716)
chr6 (185-213)||(18668922-18668950)
chr6 (185-213)||(19087958-19087986)
chr6 (185-213)||(19088192-19088220)
chr6 (185-213)||(20437017-20437045)
chr6 (185-213)||(22055006-22055034)
chr6 (185-213)||(24623941-24623969)
chr6 (185-213)||(25476042-25476070)
chr6 (185-213)||(32414913-32414941)
chr6 (185-213)||(32420754-32420782)
chr6 (185-213)||(32671816-32671844)
[»] chr5 (20 HSPs)
chr5 (185-234)||(15305216-15305265)
chr5 (185-234)||(12807081-12807130)
chr5 (185-234)||(16983258-16983307)
chr5 (185-234)||(25773649-25773698)
chr5 (185-234)||(30720720-30720769)
chr5 (185-233)||(36561328-36561376)
chr5 (185-226)||(15304822-15304863)
chr5 (185-234)||(37900852-37900901)
chr5 (185-234)||(10285285-10285334)
chr5 (185-234)||(40886838-40886887)
chr5 (185-223)||(12806853-12806891)
chr5 (185-223)||(30720492-30720530)
chr5 (185-223)||(36561099-36561137)
chr5 (185-223)||(40886610-40886648)
chr5 (185-213)||(978077-978105)
chr5 (185-213)||(978311-978339)
chr5 (185-213)||(8086264-8086292)
chr5 (185-213)||(9502627-9502655)
chr5 (185-213)||(14634157-14634185)
chr5 (185-213)||(33387453-33387481)
[»] chr4 (39 HSPs)
chr4 (185-234)||(40122713-40122762)
chr4 (185-234)||(12071561-12071610)
chr4 (185-234)||(14261044-14261093)
chr4 (185-234)||(21310425-21310474)
chr4 (185-234)||(21661763-21661812)
chr4 (185-234)||(21670527-21670576)
chr4 (185-234)||(25704651-25704700)
chr4 (185-234)||(34324811-34324860)
chr4 (185-234)||(22321495-22321544)
chr4 (185-234)||(24706475-24706524)
chr4 (187-234)||(31892240-31892287)
chr4 (192-226)||(19362189-19362223)
chr4 (185-234)||(44568837-44568886)
chr4 (185-223)||(12071799-12071837)
chr4 (185-223)||(14261283-14261321)
chr4 (200-234)||(19361662-19361696)
chr4 (185-227)||(20249247-20249289)
chr4 (185-223)||(21310660-21310698)
chr4 (185-223)||(24706247-24706285)
chr4 (185-223)||(25704890-25704928)
chr4 (185-223)||(44569076-44569114)
chr4 (192-229)||(50767871-50767908)
chr4 (185-213)||(2760730-2760758)
chr4 (185-213)||(2760961-2760989)
chr4 (185-213)||(4467520-4467548)
chr4 (185-213)||(19433358-19433386)
chr4 (187-223)||(21661537-21661573)
chr4 (187-223)||(21670301-21670337)
chr4 (185-213)||(26169986-26170014)
chr4 (185-213)||(26170221-26170249)
chr4 (185-213)||(29830343-29830371)
chr4 (185-213)||(35381128-35381156)
chr4 (185-213)||(38416650-38416678)
chr4 (185-213)||(38416884-38416912)
chr4 (185-213)||(44232077-44232105)
chr4 (185-213)||(45292066-45292094)
chr4 (185-213)||(47386520-47386548)
chr4 (185-213)||(55209574-55209602)
chr4 (185-213)||(55209808-55209836)
[»] chr3 (33 HSPs)
chr3 (185-234)||(12094582-12094631)
chr3 (185-234)||(29375138-29375187)
chr3 (185-234)||(38805245-38805294)
chr3 (185-234)||(19911509-19911558)
chr3 (185-226)||(19912174-19912215)
chr3 (185-234)||(27707392-27707441)
chr3 (185-234)||(36881282-36881331)
chr3 (185-226)||(38806341-38806382)
chr3 (185-234)||(44277459-44277508)
chr3 (185-229)||(198855-198899)
chr3 (185-234)||(3383076-3383125)
chr3 (185-226)||(12095423-12095464)
chr3 (185-234)||(13364843-13364892)
chr3 (185-234)||(19241896-19241945)
chr3 (185-234)||(43750137-43750186)
chr3 (185-226)||(44276775-44276816)
chr3 (185-229)||(46694343-46694387)
chr3 (192-234)||(32835184-32835226)
chr3 (185-228)||(48963156-48963199)
chr3 (185-223)||(13365082-13365120)
chr3 (185-223)||(19241668-19241706)
chr3 (185-223)||(29375371-29375409)
chr3 (185-223)||(36881519-36881557)
chr3 (185-223)||(46694110-46694148)
chr3 (185-213)||(6910568-6910596)
chr3 (185-213)||(13499569-13499597)
chr3 (185-213)||(19823900-19823928)
chr3 (185-213)||(20765430-20765458)
chr3 (185-213)||(27010474-27010502)
chr3 (185-213)||(27010708-27010736)
chr3 (185-213)||(42490430-42490458)
chr3 (185-213)||(42761483-42761511)
chr3 (185-213)||(42761717-42761745)
[»] chr1 (35 HSPs)
chr1 (185-234)||(3943060-3943109)
chr1 (185-234)||(9588670-9588719)
chr1 (185-234)||(284333-284382)
chr1 (185-226)||(3943763-3943804)
chr1 (185-234)||(13984995-13985044)
chr1 (185-234)||(23045507-23045556)
chr1 (185-234)||(41959078-41959127)
chr1 (185-226)||(41959809-41959850)
chr1 (186-234)||(27211192-27211240)
chr1 (192-234)||(46771644-46771686)
chr1 (185-234)||(321626-321675)
chr1 (185-226)||(9589631-9589672)
chr1 (185-234)||(24772133-24772182)
chr1 (185-234)||(40783885-40783934)
chr1 (185-226)||(44227848-44227889)
chr1 (185-227)||(47038085-47038127)
chr1 (185-234)||(44228232-44228281)
chr1 (185-233)||(23526240-23526288)
chr1 (185-223)||(284572-284610)
chr1 (185-223)||(321865-321903)
chr1 (185-223)||(23045279-23045317)
chr1 (185-223)||(24771906-24771944)
chr1 (185-223)||(40783657-40783695)
chr1 (185-226)||(51064992-51065033)
chr1 (200-229)||(52037353-52037382)
chr1 (185-213)||(6402644-6402672)
chr1 (185-217)||(10845481-10845513)
chr1 (185-213)||(11641067-11641095)
chr1 (185-213)||(16120674-16120702)
chr1 (185-213)||(30701718-30701746)
chr1 (185-213)||(36399332-36399360)
chr1 (185-213)||(36757486-36757514)
chr1 (185-213)||(40771772-40771800)
chr1 (185-213)||(40772006-40772034)
chr1 (185-213)||(52024260-52024288)
[»] scaffold1770 (1 HSPs)
scaffold1770 (185-234)||(170-219)
[»] scaffold1431 (1 HSPs)
scaffold1431 (185-234)||(127-176)
[»] scaffold0054 (2 HSPs)
scaffold0054 (185-229)||(45454-45498)
scaffold0054 (185-223)||(45692-45730)
[»] scaffold0022 (1 HSPs)
scaffold0022 (185-213)||(100647-100675)


Alignment Details
Target: chr2 (Bit Score: 129; Significance: 7e-67; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 44551588 - 44551742
Alignment:
Q  26 tattagttgctagaaaaatgatggtaacacaaaatatgtcataaaattata---tctctatctaaattttgccataaaaacattaatatgggtgcagctc 122  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||    
T  44551588 tattagttgctaaaaaaatgatggtaacacaaaatatgtcataaaattataatatctctatctaaattttgccataaaaacattaatatgggtgcagctc 44551687  T
Q  123 ccccacctcaacatttaggacttcaacactcaacttttatgattgattatttggt 177  Q
     ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  44551688 tcccacctcaacatttaggacttcaacactcaacttttatgattaattatttggt 44551742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 1102503 - 1102552
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1102503 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 1102552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 34224431 - 34224382
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  34224431 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 34224382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 3518908 - 3518957
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  3518908 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 3518957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 12970016 - 12969967
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  12970016 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 12969967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 23366790 - 23366838
Alignment:
Q  186 actccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  23366790 actccctccgtttcaaaatacatgtccattttggagaaattgcactaac 23366838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 37674014 - 37673965
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||||||||||||||||||||| |||||| ||||||||||| ||||    
T  37674014 tactccctccgtttcaaaatacatgttcattttggagaaattgcactaac 37673965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 39938170 - 39938219
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  39938170 tactccctccgtttcaaaatacatgaccattttggagaaattgcactaac 39938219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 1646564 - 1646526
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  1646564 tactccctccgtttcataatacctgtccattttagagaa 1646526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 22388138 - 22388176
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  22388138 tactccctccgtttcataatacttgtccattttagagaa 22388176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 23367066 - 23367028
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  23367066 tactccctccgtttcataatacttgtccattttagagaa 23367028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 34222058 - 34222099
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaatt 226  Q
    |||||| ||||||| ||||||||||||||||||| |||||||    
T  34222058 tactccttccgttttaaaatacatgtccattttatagaaatt 34222099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 2183219 - 2183191
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  2183219 tactccctccgtttcaaaatacatgtcca 2183191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 5405258 - 5405230
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  5405258 tactccctccgtttcaaaatacatgtcca 5405230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 7608311 - 7608283
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  7608311 tactccctccgtttcaaaatacatgtcca 7608283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 8042284 - 8042256
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  8042284 tactccctccgtttcaaaatacatgtcca 8042256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 11841593 - 11841621
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  11841593 tactccctccgtttcaaaatacatgtcca 11841621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 19141066 - 19141094
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  19141066 tactccctccgtttcaaaatacatgtcca 19141094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 19141328 - 19141300
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  19141328 tactccctccgtttcaaaatacatgtcca 19141300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 39358146 - 39358174
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  39358146 tactccctccgtttcaaaatacatgtcca 39358174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 44365419 - 44365391
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  44365419 tactccctccgtttcaaaatacatgtcca 44365391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 23467 - 23516
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23467 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 23516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 23913 - 23872
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaatt 226  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  23913 tactccatccgtttcaaaatacatgtccattttagagaaatt 23872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 8697951 - 8697902
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8697951 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 8697902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 27034997 - 27035046
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27034997 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 27035046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 41308014 - 41307965
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41308014 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 41307965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 45278754 - 45278705
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45278754 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 45278705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 3585451 - 3585500
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  3585451 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 3585500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 10646592 - 10646641
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  10646592 tacttcctccgtttcaaaatacatgtccattttggagaaattgcagtaac 10646641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 40486506 - 40486457
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||    
T  40486506 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaac 40486457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 40919006 - 40918957
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  40919006 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 40918957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 43275674 - 43275625
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  43275674 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 43275625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 2540208 - 2540159
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||| |||||||||||||||||||||||||||| ||||||||||| ||||    
T  2540208 tacttcctccgtttcaaaatacatgtccattttggagaaattgcactaac 2540159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 7146913 - 7146962
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||| ||||||||||||||||||||||||||  |||||||||||||||    
T  7146913 tactccttccgtttcaaaatacatgtccattttgaagaaattgcagtaac 7146962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 11174500 - 11174451
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||||||||||||||||||||| |||||| ||||||||||| ||||    
T  11174500 tactccctccgtttcaaaatacatgttcattttggagaaattgcactaac 11174451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 11646602 - 11646553
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||| |||||||||||||||||||||||| ||||||||||| ||||    
T  11646602 tactcccttcgtttcaaaatacatgtccattttggagaaattgcactaac 11646553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 40058580 - 40058531
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  40058580 tactccctccgtttcaaaatacatgtccatttcggagaaattgcactaac 40058531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 41305762 - 41305803
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaatt 226  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  41305762 tactctctccgtttcaaaatacatgtccattttagagaaatt 41305803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 37345571 - 37345615
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgca 229  Q
    |||||||||||||||||||||||||||||||||  ||||||||||    
T  37345571 tactccctccgtttcaaaatacatgtccattttgaagaaattgca 37345615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 36068080 - 36068122
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattg 227  Q
    ||||||||||||||||||||||||||||||||| ||| |||||    
T  36068080 tactccctccgtttcaaaatacatgtccattttggaggaattg 36068122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 45278013 - 45278053
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaatt 226  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  45278013 tactccctc-gtttcaaaatacatgtccattttagagaaatt 45278053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 7147190 - 7147152
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  7147190 tactccctccgtttcataatacttgtccattttagagaa 7147152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 11646325 - 11646363
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  11646325 tactccctccgtttcataatacttgtccattttagagaa 11646363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 30999524 - 30999562
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  30999524 tactccctccgtttcataatacttgtccattttagagaa 30999562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 234
Target Start/End: Complemental strand, 30999791 - 30999749
Alignment:
Q  192 tccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||||||||||||||| ||||| ||||||||||| ||||    
T  30999791 tccgtttcaaaatacatgtcaattttggagaaattgcactaac 30999749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 36068357 - 36068319
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  36068357 tactccctccgtttcataatacttgtccattttagagaa 36068319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 40058303 - 40058341
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  40058303 tactccctccgtttcataatacttgtccattttagagaa 40058341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 40918731 - 40918769
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  40918731 tactccctccgtttcataatacttgtccattttagagaa 40918769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 43275399 - 43275437
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  43275399 tactccctccgtttcataatacttgtccattttagagaa 43275437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 132017 - 132045
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  132017 tactccctccgtttcaaaatacatgtcca 132045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 616783 - 616811
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  616783 tactccctccgtttcaaaatacatgtcca 616811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 617045 - 617017
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  617045 tactccctccgtttcaaaatacatgtcca 617017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 623176 - 623204
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  623176 tactccctccgtttcaaaatacatgtcca 623204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 623438 - 623410
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  623438 tactccctccgtttcaaaatacatgtcca 623410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 5878317 - 5878349
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccatttt 217  Q
    ||||||||||||||| |||||||||||||||||    
T  5878317 tactccctccgtttccaaatacatgtccatttt 5878349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 14237542 - 14237514
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  14237542 tactccctccgtttcaaaatacatgtcca 14237514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 20546564 - 20546520
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgca 229  Q
    |||||||||| |||||||||| |||||||||||  ||||||||||    
T  20546564 tactccctccatttcaaaatatatgtccattttgaagaaattgca 20546520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 40494646 - 40494618
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  40494646 tactccctccgtttcaaaatacatgtcca 40494618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 42587510 - 42587482
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  42587510 tactccctccgtttcaaaatacatgtcca 42587482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 25060186 - 25060137
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25060186 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 25060137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 2911601 - 2911552
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  2911601 tactccctccatttcaaaatacatgtccattttggagaaattgcagtaac 2911552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 10981508 - 10981557
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  10981508 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 10981557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 27813811 - 27813860
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  27813811 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 27813860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 36453399 - 36453352
Alignment:
Q  187 ctccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  36453399 ctccctccgtttcaaaatacatgtccattttggagaaattgcactaac 36453352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 25614628 - 25614579
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  25614628 tactccttccgtttcaaaatacatgtccattttggagaaattgcactaac 25614579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 40348960 - 40349009
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  40348960 tactccttccgtttcaaaatacatgtccattttggagaaattgcactaac 40349009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 47110451 - 47110500
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  47110451 tactccctccatttcaaaatacatgtccattttggagaaattgcactaac 47110500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 226
Target Start/End: Original strand, 25059456 - 25059491
Alignment:
Q  191 ctccgtttcaaaatacatgtccattttagagaaatt 226  Q
    ||||||||||||||||||||||||||||||||||||    
T  25059456 ctccgtttcaaaatacatgtccattttagagaaatt 25059491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 2910859 - 2910900
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaatt 226  Q
    ||||||||||||||||||||||||||| |||||| |||||||    
T  2910859 tactccctccgtttcaaaatacatgtctattttaaagaaatt 2910900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 27814088 - 27814050
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  27814088 tactccctccgtttcataatacttgtccattttagagaa 27814050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 40349238 - 40349200
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  40349238 tactccctccgtttcataatacttgtccattttagagaa 40349200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 16778505 - 16778533
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  16778505 tactccctccgtttcaaaatacatgtcca 16778533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 20885103 - 20885131
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  20885103 tactccctccgtttcaaaatacatgtcca 20885131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 25566548 - 25566576
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  25566548 tactccctccgtttcaaaatacatgtcca 25566576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 28061515 - 28061543
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  28061515 tactccctccgtttcaaaatacatgtcca 28061543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 28061777 - 28061749
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  28061777 tactccctccgtttcaaaatacatgtcca 28061749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 36623308 - 36623336
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  36623308 tactccctccgtttcaaaatacatgtcca 36623336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 36623570 - 36623542
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  36623570 tactccctccgtttcaaaatacatgtcca 36623542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 38852109 - 38852081
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  38852109 tactccctccgtttcaaaatacatgtcca 38852081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 41897988 - 41898016
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  41897988 tactccctccgtttcaaaatacatgtcca 41898016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 41898250 - 41898222
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  41898250 tactccctccgtttcaaaatacatgtcca 41898222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 42877386 - 42877414
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  42877386 tactccctccgtttcaaaatacatgtcca 42877414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 46103370 - 46103398
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  46103370 tactccctccgtttcaaaatacatgtcca 46103398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 46103625 - 46103597
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  46103625 tactccctccgtttcaaaatacatgtcca 46103597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 47156027 - 47156055
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  47156027 tactccctccgtttcaaaatacatgtcca 47156055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 47156289 - 47156261
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  47156289 tactccctccgtttcaaaatacatgtcca 47156261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 15064971 - 15064926
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcag 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  15064971 tactccctccgtttcaaaatacatgtccattttagagaaattgcag 15064926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 1605579 - 1605628
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  1605579 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 1605628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 7761301 - 7761350
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  7761301 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 7761350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 17942443 - 17942492
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  17942443 tactcccttcgtttcaaaatacatgtccatttttgagaaattgcagtaac 17942492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 19996322 - 19996363
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaatt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  19996322 tactccctccgtttcaaaatacatgtccattttagagaaatt 19996363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 19996768 - 19996719
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  19996768 tactccctccgtttcaaaatacatgtctattttggagaaattgcagtaac 19996719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 29260192 - 29260241
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  29260192 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 29260241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 4129435 - 4129484
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  4129435 tactccctccgtttcaaaatacatatccactttggagaaattgcagtaac 4129484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 8626482 - 8626531
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  8626482 tactccctccgtttcaaaatacatgtccattttgaagaaattgcattaac 8626531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 30734879 - 30734836
Alignment:
Q  191 ctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||||||||||||||||||||||  |||||||||||||||    
T  30734879 ctccgtttcaaaatacatgtccattttgaagaaattgcagtaac 30734836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 192 - 234
Target Start/End: Complemental strand, 30734753 - 30734711
Alignment:
Q  192 tccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||||||||||||||||||||| ||||||||||| ||||    
T  30734753 tccgtttcaaaatacatgtccattttggagaaattgcactaac 30734711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 13757208 - 13757249
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaatt 226  Q
    ||||| ||||||||||||||||||||||||||| ||||||||    
T  13757208 tactctctccgtttcaaaatacatgtccattttggagaaatt 13757249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 1605855 - 1605817
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  1605855 tactccctccgtttcataatacttgtccattttagagaa 1605817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 7761577 - 7761539
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  7761577 tactccctccgtttcataatacttgtccattttagagaa 7761539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 8626759 - 8626721
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  8626759 tactccctccgtttcataatacttgtccattttagagaa 8626721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 29260469 - 29260431
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  29260469 tactccctccgtttcataatacttgtccattttagagaa 29260431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 4147931 - 4147959
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  4147931 tactccctccgtttcaaaatacatgtcca 4147959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 18668688 - 18668716
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  18668688 tactccctccgtttcaaaatacatgtcca 18668716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 18668950 - 18668922
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  18668950 tactccctccgtttcaaaatacatgtcca 18668922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 19087958 - 19087986
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  19087958 tactccctccgtttcaaaatacatgtcca 19087986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 19088220 - 19088192
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  19088220 tactccctccgtttcaaaatacatgtcca 19088192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 20437017 - 20437045
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  20437017 tactccctccgtttcaaaatacatgtcca 20437045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 22055034 - 22055006
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  22055034 tactccctccgtttcaaaatacatgtcca 22055006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 24623941 - 24623969
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  24623941 tactccctccgtttcaaaatacatgtcca 24623969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 25476070 - 25476042
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  25476070 tactccctccgtttcaaaatacatgtcca 25476042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 32414941 - 32414913
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  32414941 tactccctccgtttcaaaatacatgtcca 32414913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 32420782 - 32420754
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  32420782 tactccctccgtttcaaaatacatgtcca 32420754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 32671816 - 32671844
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  32671816 tactccctccgtttcaaaatacatgtcca 32671844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 15305265 - 15305216
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15305265 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 15305216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 12807130 - 12807081
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  12807130 tactccctccgtttcaaaatacatgtccattttggagaaattgcattaac 12807081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 16983258 - 16983307
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  16983258 tactccctctgtttcaaaatacatgtccattttggagaaattgcagtaac 16983307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 25773649 - 25773698
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  25773649 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 25773698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 30720769 - 30720720
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  30720769 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 30720720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 36561376 - 36561328
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaa 233  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  36561376 tactccatccgtttcaaaatacatgtccattttagaaaaattgcagtaa 36561328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 15304822 - 15304863
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaatt 226  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  15304822 tactccctccgttttaaaatacatgtccattttagagaaatt 15304863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 37900901 - 37900852
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||||||||||||||||||  |||||||| ||||||||||||||||    
T  37900901 tactccctccgtttcaaaatacacatccattttggagaaattgcagtaac 37900852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 10285334 - 10285285
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||| ||||| ||||| ||||||||||| ||||    
T  10285334 tactccctccgtttcaaaatagatgtctattttggagaaattgcattaac 10285285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 40886887 - 40886838
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||| ||||||||||||||||||| |||||| ||||||||||| ||||    
T  40886887 tactccatccgtttcaaaatacatgttcattttggagaaattgcactaac 40886838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 12806853 - 12806891
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  12806853 tactccctccgtttcataatacttgtccattttagagaa 12806891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 30720492 - 30720530
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  30720492 tactccctccgtttcataatacttgtccattttagagaa 30720530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 36561099 - 36561137
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  36561099 tactccctccgtttcataatacttgtccattttagagaa 36561137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 40886610 - 40886648
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  40886610 tactccctccgtttcataatacttgtccattttagagaa 40886648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 978077 - 978105
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  978077 tactccctccgtttcaaaatacatgtcca 978105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 978339 - 978311
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  978339 tactccctccgtttcaaaatacatgtcca 978311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 8086292 - 8086264
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  8086292 tactccctccgtttcaaaatacatgtcca 8086264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 9502627 - 9502655
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  9502627 tactccctccgtttcaaaatacatgtcca 9502655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 14634157 - 14634185
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  14634157 tactccctccgtttcaaaatacatgtcca 14634185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 33387481 - 33387453
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  33387481 tactccctccgtttcaaaatacatgtcca 33387453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 40122762 - 40122713
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40122762 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 40122713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 12071561 - 12071610
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  12071561 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 12071610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 14261044 - 14261093
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  14261044 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 14261093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 21310425 - 21310474
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  21310425 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 21310474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 21661812 - 21661763
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  21661812 tactccctccctttcaaaatacatgtccattttggagaaattgcagtaac 21661763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 21670576 - 21670527
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  21670576 tactccctccctttcaaaatacatgtccattttggagaaattgcagtaac 21670527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 25704651 - 25704700
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  25704651 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 25704700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 34324860 - 34324811
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  34324860 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 34324811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 22321544 - 22321495
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  22321544 tactccttccgtttcaaaatacatgtccattttggagaaattgcactaac 22321495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 24706524 - 24706475
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  24706524 tactccatccgtttcaaaatacatgtccattttggagaaattgcactaac 24706475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 31892240 - 31892287
Alignment:
Q  187 ctccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||||||    
T  31892240 ctccctccgtatcaaaatacatgttcattttaaagaaattgcagtaac 31892287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 192 - 226
Target Start/End: Complemental strand, 19362223 - 19362189
Alignment:
Q  192 tccgtttcaaaatacatgtccattttagagaaatt 226  Q
    |||||||||||||||||||||||||||||||||||    
T  19362223 tccgtttcaaaatacatgtccattttagagaaatt 19362189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 44568837 - 44568886
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||| ||||||||||||||||||||||||||  |||||||||| ||||    
T  44568837 tactccttccgtttcaaaatacatgtccattttgaagaaattgcactaac 44568886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 12071837 - 12071799
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  12071837 tactccctccgtttcataatacttgtccattttagagaa 12071799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 14261321 - 14261283
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  14261321 tactccctccgtttcataatacttgtccattttagagaa 14261283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 19361662 - 19361696
Alignment:
Q  200 aaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||||||||||||| ||||||||||||||||    
T  19361662 aaaatacatgtccattttggagaaattgcagtaac 19361696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 227
Target Start/End: Complemental strand, 20249289 - 20249247
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattg 227  Q
    ||||| ||||||||||||||||||||||||||| || ||||||    
T  20249289 tactctctccgtttcaaaatacatgtccattttggataaattg 20249247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 21310698 - 21310660
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  21310698 tactccctccgtttcataatacttgtccattttagagaa 21310660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 24706247 - 24706285
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  24706247 tactccctccgtttcataatacttgtccattttagagaa 24706285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 25704928 - 25704890
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  25704928 tactccctccgtttcataatacttgtccattttagagaa 25704890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 44569114 - 44569076
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  44569114 tactccctccgtttcataatacttgtccattttagagaa 44569076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 229
Target Start/End: Original strand, 50767871 - 50767908
Alignment:
Q  192 tccgtttcaaaatacatgtccattttagagaaattgca 229  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  50767871 tccgtttcaaaatacatattcattttagagaaattgca 50767908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 2760730 - 2760758
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  2760730 tactccctccgtttcaaaatacatgtcca 2760758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 2760989 - 2760961
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  2760989 tactccctccgtttcaaaatacatgtcca 2760961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 4467520 - 4467548
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  4467520 tactccctccgtttcaaaatacatgtcca 4467548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 19433358 - 19433386
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  19433358 tactccctccgtttcaaaatacatgtcca 19433386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 21661537 - 21661573
Alignment:
Q  187 ctccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  21661537 ctccctccgtttcataatacttgtccattttagagaa 21661573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 21670301 - 21670337
Alignment:
Q  187 ctccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  21670301 ctccctccgtttcataatacttgtccattttagagaa 21670337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 26169986 - 26170014
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  26169986 tactccctccgtttcaaaatacatgtcca 26170014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 26170249 - 26170221
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  26170249 tactccctccgtttcaaaatacatgtcca 26170221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 29830343 - 29830371
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  29830343 tactccctccgtttcaaaatacatgtcca 29830371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 35381156 - 35381128
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  35381156 tactccctccgtttcaaaatacatgtcca 35381128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 38416650 - 38416678
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  38416650 tactccctccgtttcaaaatacatgtcca 38416678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 38416912 - 38416884
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  38416912 tactccctccgtttcaaaatacatgtcca 38416884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 44232077 - 44232105
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  44232077 tactccctccgtttcaaaatacatgtcca 44232105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 45292094 - 45292066
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  45292094 tactccctccgtttcaaaatacatgtcca 45292066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 47386548 - 47386520
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  47386548 tactccctccgtttcaaaatacatgtcca 47386520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 55209574 - 55209602
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  55209574 tactccctccgtttcaaaatacatgtcca 55209602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 55209836 - 55209808
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  55209836 tactccctccgtttcaaaatacatgtcca 55209808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 12094582 - 12094631
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12094582 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 12094631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 29375138 - 29375187
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29375138 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 29375187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 38805245 - 38805294
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38805245 tactccctccgttttaaaatacatgtccattttagagaaattgcagtaac 38805294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 19911509 - 19911558
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  19911509 tactccctccgtttcaaaatacatgttcattttggagaaattgcagtaac 19911558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 19912215 - 19912174
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaatt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  19912215 tactccctccgtttcaaaatacatgtccattttagagaaatt 19912174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 27707441 - 27707392
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  27707441 tactccctccgtttcgaaatacatgtccattttggagaaattgcagtaac 27707392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 36881282 - 36881331
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  36881282 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 36881331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 38806382 - 38806341
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaatt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  38806382 tactccctccgtttcaaaatacatgtccattttagagaaatt 38806341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 44277508 - 44277459
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  44277508 tactccctccgtttcaaaatacatgtctattttggagaaattgcagtaac 44277459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 198855 - 198899
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgca 229  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  198855 tactccctccgtttcaaaatacatgtccattttggagaaattgca 198899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 3383076 - 3383125
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||| |||||||||||||| ||||||||||| ||||||||||||||||    
T  3383076 tactccttccgtttcaaaatatatgtccattttggagaaattgcagtaac 3383125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 12095464 - 12095423
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaatt 226  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  12095464 tactccctccgtttcaaaatatatgtccattttagagaaatt 12095423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 13364843 - 13364892
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||||||||||||||||||||| |||||| ||||||||||| ||||    
T  13364843 tactccctccgtttcaaaatacatgttcattttggagaaattgcactaac 13364892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 19241945 - 19241896
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| | ||||||||| ||||    
T  19241945 tactccctccgtttcaaaatacatgtccattttggtgaaattgcactaac 19241896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 43750137 - 43750186
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||| |||||||||||||||||||||||| ||||||||| ||||||    
T  43750137 tactcccttcgtttcaaaatacatgtccattttggagaaattggagtaac 43750186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 44276775 - 44276816
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaatt 226  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  44276775 tactctctccgtttcaaaatacatgtccattttagagaaatt 44276816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 46694387 - 46694343
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgca 229  Q
    |||||||||||||||||||||||||||| |||| |||||||||||    
T  46694387 tactccctccgtttcaaaatacatgtcctttttggagaaattgca 46694343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 192 - 234
Target Start/End: Complemental strand, 32835226 - 32835184
Alignment:
Q  192 tccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||||||||||||||||||||| ||||||||||| ||||    
T  32835226 tccgtttcaaaatacatgtccattttggagaaattgcaataac 32835184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 48963156 - 48963199
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgc 228  Q
    |||||||||||||||||||||||| || ||||| ||||||||||    
T  48963156 tactccctccgtttcaaaatacatatctattttggagaaattgc 48963199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 13365120 - 13365082
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  13365120 tactccctccgtttcataatacttgtccattttagagaa 13365082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 19241668 - 19241706
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  19241668 tactccctccgtttcataatacttgtccattttagagaa 19241706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 29375409 - 29375371
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  29375409 tactccctccgtttcataatacttgtccattttagagaa 29375371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 36881557 - 36881519
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  36881557 tactccctccgtttcataatacttgtccattttagagaa 36881519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 46694110 - 46694148
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  46694110 tactccctccgtttcataatacttgtccattttagagaa 46694148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 6910596 - 6910568
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  6910596 tactccctccgtttcaaaatacatgtcca 6910568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 13499597 - 13499569
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  13499597 tactccctccgtttcaaaatacatgtcca 13499569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 19823900 - 19823928
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  19823900 tactccctccgtttcaaaatacatgtcca 19823928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 20765458 - 20765430
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  20765458 tactccctccgtttcaaaatacatgtcca 20765430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 27010474 - 27010502
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  27010474 tactccctccgtttcaaaatacatgtcca 27010502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 27010736 - 27010708
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  27010736 tactccctccgtttcaaaatacatgtcca 27010708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 42490458 - 42490430
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  42490458 tactccctccgtttcaaaatacatgtcca 42490430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 42761483 - 42761511
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  42761483 tactccctccgtttcaaaatacatgtcca 42761511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 42761745 - 42761717
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  42761745 tactccctccgtttcaaaatacatgtcca 42761717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 3943060 - 3943109
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3943060 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 3943109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 9588670 - 9588719
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9588670 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 9588719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 284333 - 284382
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  284333 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 284382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 3943804 - 3943763
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaatt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3943804 tactccctccgtttcaaaatacatgtccattttagagaaatt 3943763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 13985044 - 13984995
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  13985044 tactccatccgtttcaaaatacatgtccattttggagaaattgcagtaac 13984995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 23045556 - 23045507
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  23045556 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaac 23045507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 41959078 - 41959127
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  41959078 tactccctccgtttcaaaatacatgtccattttggagaaattgcaataac 41959127  T

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Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 41959850 - 41959809
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaatt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  41959850 tactccctccgtttcaaaatacatgtccattttagagaaatt 41959809  T

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Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 27211240 - 27211192
Alignment:
Q  186 actccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  27211240 actccctccgtttcaaaatacatgtccattttggagaaattgcaataac 27211192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 192 - 234
Target Start/End: Original strand, 46771644 - 46771686
Alignment:
Q  192 tccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  46771644 tccgtttcaaaatacatgtccattttggagaaattgcagtaac 46771686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 321626 - 321675
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||||||||||||||||||||| |||||| ||||||||||| ||||    
T  321626 tactccctccgtttcaaaatacatgttcattttggagaaattgcactaac 321675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 9589672 - 9589631
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaatt 226  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  9589672 tactccctccgtttcaaaatacatgtctattttagagaaatt 9589631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 24772182 - 24772133
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  24772182 tactccctccgtttcaaaatacatgtccattttgaagaaattgcactaac 24772133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 40783934 - 40783885
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||||||||||||||||||||| |||||| ||||||||||| ||||    
T  40783934 tactccctccgtttcaaaatacatgttcattttggagaaattgcactaac 40783885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 44227848 - 44227889
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaatt 226  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  44227848 tactccctccgtttcaaaatacatgtccattttggagaaatt 44227889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 227
Target Start/End: Complemental strand, 47038127 - 47038085
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattg 227  Q
    |||||| |||||||||||||||||||||||||| |||||||||    
T  47038127 tactccatccgtttcaaaatacatgtccattttggagaaattg 47038085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 44228281 - 44228232
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||| ||||| |||||||||||||||||||||| |||||||||| |||||    
T  44228281 tactacctccatttcaaaatacatgtccattttggagaaattgctgtaac 44228232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 23526240 - 23526288
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaa 233  Q
    |||||| ||| ||||||||||||||| |||||| |||||||||||||||    
T  23526240 tactccttccatttcaaaatacatgttcattttggagaaattgcagtaa 23526288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 284610 - 284572
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  284610 tactccctccgtttcataatacttgtccattttagagaa 284572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 321903 - 321865
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  321903 tactccctccgtttcataatacttgtccattttagagaa 321865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 23045279 - 23045317
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  23045279 tactccctccgtttcataatacttgtccattttagagaa 23045317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 24771906 - 24771944
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  24771906 tactccctccgtttcataatacttgtccattttagagaa 24771944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 40783657 - 40783695
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  40783657 tactccctccgtttcataatacttgtccattttagagaa 40783695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 51065033 - 51064992
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaatt 226  Q
    |||||||||||||||| ||||| ||||||||||| |||||||    
T  51065033 tactccctccgtttcacaatacttgtccattttaaagaaatt 51064992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 229
Target Start/End: Complemental strand, 52037382 - 52037353
Alignment:
Q  200 aaaatacatgtccattttagagaaattgca 229  Q
    ||||||||||||||||||||||||||||||    
T  52037382 aaaatacatgtccattttagagaaattgca 52037353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 6402672 - 6402644
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  6402672 tactccctccgtttcaaaatacatgtcca 6402644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 10845481 - 10845513
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccatttt 217  Q
    ||||| |||||||||||||||||||||||||||    
T  10845481 tactcactccgtttcaaaatacatgtccatttt 10845513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 11641067 - 11641095
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  11641067 tactccctccgtttcaaaatacatgtcca 11641095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 16120702 - 16120674
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  16120702 tactccctccgtttcaaaatacatgtcca 16120674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 30701718 - 30701746
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  30701718 tactccctccgtttcaaaatacatgtcca 30701746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 36399360 - 36399332
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  36399360 tactccctccgtttcaaaatacatgtcca 36399332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 36757486 - 36757514
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  36757486 tactccctccgtttcaaaatacatgtcca 36757514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 40771772 - 40771800
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  40771772 tactccctccgtttcaaaatacatgtcca 40771800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 40772034 - 40772006
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  40772034 tactccctccgtttcaaaatacatgtcca 40772006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 52024288 - 52024260
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  52024288 tactccctccgtttcaaaatacatgtcca 52024260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1770 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 170 - 219
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  170 tactccctccgtttcaaaatacatatccactttggagaaattgcagtaac 219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1431 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 176 - 127
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgcagtaac 234  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||| ||||    
T  176 tactctctccgtttcaaaatacatgtccattttggagaaattgcactaac 127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 45454 - 45498
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaaattgca 229  Q
    |||||||||||||||||||||||||| |||||| |||||||||||    
T  45454 tactccctccgtttcaaaatacatgttcattttggagaaattgca 45498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 45730 - 45692
Alignment:
Q  185 tactccctccgtttcaaaatacatgtccattttagagaa 223  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  45730 tactccctccgtttcataatacttgtccattttagagaa 45692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 100647 - 100675
Alignment:
Q  185 tactccctccgtttcaaaatacatgtcca 213  Q
    |||||||||||||||||||||||||||||    
T  100647 tactccctccgtttcaaaatacatgtcca 100675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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