View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2658_high_3 (Length: 305)
Name: NF2658_high_3
Description: NF2658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2658_high_3 |
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Alignment Details
Target: chr2 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 30 - 297
Target Start/End: Complemental strand, 35753970 - 35753703
Alignment:
| Q |
30 |
cttatgagacaaaagaaaagaaaaactgaattgaatttgatttatttcatgagttgagatatgatagttagacccaggcctgaaacaactgagtagcagt |
129 |
Q |
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| T |
35753970 |
cttatgagacaaaagaaaagaaaaactgaattgaatttgatttatttcatgagttgagatatgatagttagacccaggcctgaaacaactgagtagcagt |
35753871 |
T |
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| Q |
130 |
accattatgagaatatagtgattatcagtcctataagacaagaaagaaaagaaaaacttatttgaatatggtttattttcaagaactgaaatatgatagt |
229 |
Q |
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| T |
35753870 |
accattatgagaatacagtgattatcagtcctataagacaagaaagaaaagaaaaacttatttgaatatggtttattttcaagaactgaaatatgatagt |
35753771 |
T |
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| Q |
230 |
cacactcaggtctgaatcaacttaatagcagtactaatataaaaattcactcgttcataatattattc |
297 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |
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| T |
35753770 |
cacactcaggtctgaatcaacttaatagcagcactaatataaaaattcactcgttcataattttattc |
35753703 |
T |
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