View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2658_low_10 (Length: 248)
Name: NF2658_low_10
Description: NF2658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2658_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 27 - 199
Target Start/End: Complemental strand, 29530510 - 29530338
Alignment:
| Q |
27 |
ttctctttatatagtgattgcatggaggggcaccgtgacatacatagaatggatatacgacctaaaagacatactacacgaagcaaacttcaaaaacgac |
126 |
Q |
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| T |
29530510 |
ttctctttatatagtgattgcatggaggggcaccgtgacatacatagaatggatatacgacctaaaagacatactacacgaagcaaacttcaaaaacgac |
29530411 |
T |
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| Q |
127 |
ccatcaatcaaagtagaaacaggattcttcgatttatacactaagaaagaacaatcatgcacttattgttcat |
199 |
Q |
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|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
29530410 |
ccatcaatcaaagtagaaacaggattctacgatttatacaccaagaaagaacaatcatgcacttattgttcat |
29530338 |
T |
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