View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2659_high_6 (Length: 394)
Name: NF2659_high_6
Description: NF2659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2659_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 180; Significance: 4e-97; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 20 - 269
Target Start/End: Original strand, 34852182 - 34852430
Alignment:
| Q |
20 |
tgtaaataaacgtcaaaaactaaactatgttgttaatcgcggtgcgggaattgagcttattctgaaacgcgattttcaaagggaagaaaatttggtnnnn |
119 |
Q |
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| T |
34852182 |
tgtaaataaacgttaaaaactaaactatgttgttaatcgcggtgcgg-aattgagcttattctgaaacgcgattttcaaagggaagaaaatttggtaaaa |
34852280 |
T |
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| Q |
120 |
nnnnnnnnnnnnnncctgtatgatgtttctagcggctgccttcgtccctacgatgacacggcaaggttttgctttttccggggagttgagttccgatcgt |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34852281 |
aagaaaaaggaaaacctgtatgatgtttctagcggctgccttcgtccctacgatgacacggcaaggttttgctttttccggggagttgagttccgatcgt |
34852380 |
T |
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| Q |
220 |
ttctgatacaactaataagggttttgtgacttgatgaggtgcttgctgag |
269 |
Q |
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| T |
34852381 |
ttctgatacaactaataagggttttgtgatttgatgaggtgcttgctgag |
34852430 |
T |
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