View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2659_low_1 (Length: 1389)

Name: NF2659_low_1
Description: NF2659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2659_low_1
NF2659_low_1
[»] chr6 (94 HSPs)
chr6 (176-1388)||(27601510-27602719)
chr6 (176-907)||(25513039-25513770)
chr6 (176-924)||(26648646-26649387)
chr6 (176-924)||(26754614-26755355)
chr6 (177-907)||(31286741-31287474)
chr6 (184-543)||(25076023-25076382)
chr6 (176-543)||(26850833-26851200)
chr6 (176-907)||(25547132-25547875)
chr6 (17-142)||(27602753-27602878)
chr6 (176-543)||(26863772-26864139)
chr6 (176-936)||(26886270-26887032)
chr6 (179-552)||(26951944-26952317)
chr6 (379-907)||(26145364-26145892)
chr6 (357-834)||(26979755-26980231)
chr6 (176-314)||(27590841-27590979)
chr6 (176-314)||(27696449-27696587)
chr6 (191-543)||(27425225-27425577)
chr6 (191-471)||(27528976-27529256)
chr6 (191-314)||(27681163-27681286)
chr6 (176-543)||(25581871-25582238)
chr6 (176-773)||(26658143-26658743)
chr6 (176-773)||(26764114-26764714)
chr6 (357-835)||(26961456-26961934)
chr6 (176-314)||(27675438-27675576)
chr6 (191-314)||(27608978-27609101)
chr6 (191-314)||(27704075-27704198)
chr6 (176-907)||(28794573-28795304)
chr6 (501-916)||(27674834-27675248)
chr6 (17-142)||(25485057-25485179)
chr6 (649-1144)||(26638039-26638532)
chr6 (649-1144)||(26744005-26744498)
chr6 (191-314)||(26804695-26804818)
chr6 (17-137)||(25512885-25513002)
chr6 (17-137)||(25546976-25547093)
chr6 (573-907)||(25485551-25485885)
chr6 (17-142)||(26057915-26058037)
chr6 (17-142)||(26077885-26078007)
chr6 (176-314)||(26637720-26637858)
chr6 (176-314)||(26743686-26743824)
chr6 (176-314)||(27716358-27716496)
chr6 (17-142)||(26144863-26144985)
chr6 (176-271)||(26145017-26145112)
chr6 (17-124)||(26657981-26658088)
chr6 (17-124)||(26763952-26764059)
chr6 (223-543)||(27662845-27663165)
chr6 (182-271)||(26058077-26058166)
chr6 (182-271)||(26078047-26078136)
chr6 (176-271)||(25485211-25485306)
chr6 (193-320)||(28788469-28788596)
chr6 (424-907)||(28788797-28789280)
chr6 (726-1154)||(27662397-27662821)
chr6 (424-546)||(27703843-27703965)
chr6 (176-306)||(26625434-26625564)
chr6 (176-306)||(26731411-26731541)
chr6 (56-137)||(26825864-26825946)
chr6 (65-142)||(25581762-25581839)
chr6 (731-1133)||(26625851-26626246)
chr6 (731-1133)||(26731828-26732223)
chr6 (650-916)||(26805139-26805404)
chr6 (176-543)||(26825987-26826354)
chr6 (727-1145)||(26952333-26952731)
chr6 (32-132)||(26863618-26863719)
chr6 (429-543)||(27716129-27716243)
chr6 (862-936)||(26851360-26851433)
chr6 (961-1015)||(28795338-28795392)
chr6 (650-771)||(27608524-27608645)
chr6 (658-773)||(25076539-25076654)
chr6 (430-546)||(27590609-27590725)
chr6 (496-543)||(27681468-27681515)
chr6 (429-471)||(27675281-27675323)
chr6 (987-1153)||(31287555-31287721)
chr6 (862-907)||(25491409-25491454)
chr6 (651-918)||(27681596-27681862)
chr6 (501-546)||(27696217-27696262)
chr6 (978-1082)||(25491243-25491347)
chr6 (424-543)||(27608749-27608868)
chr6 (727-918)||(27715758-27715948)
chr6 (856-907)||(25582551-25582602)
chr6 (856-907)||(26058763-26058814)
chr6 (856-907)||(26078733-26078784)
chr6 (727-833)||(26851225-26851331)
chr6 (256-323)||(28141859-28141926)
chr6 (961-1015)||(28789314-28789368)
chr6 (958-1012)||(31290372-31290426)
chr6 (501-546)||(26805005-26805050)
chr6 (1027-1144)||(26658986-26659100)
chr6 (1027-1144)||(26764957-26765071)
chr6 (424-466)||(26804928-26804970)
chr6 (1049-1141)||(26851561-26851650)
chr6 (399-465)||(27681371-27681437)
chr6 (256-326)||(28238598-28238668)
chr6 (256-326)||(28245576-28245646)
chr6 (569-602)||(26625698-26625731)
chr6 (569-602)||(26731675-26731708)
[»] chr1 (10 HSPs)
chr1 (176-916)||(265591-266327)
chr1 (176-543)||(28125322-28125689)
chr1 (176-544)||(26138098-26138466)
chr1 (52-137)||(28125733-28125819)
chr1 (176-315)||(28130588-28130727)
chr1 (52-137)||(28130771-28130857)
chr1 (733-830)||(28124969-28125066)
chr1 (424-543)||(28130353-28130472)
chr1 (728-833)||(26138716-26138821)
chr1 (740-830)||(28130000-28130090)
[»] scaffold0419 (3 HSPs)
scaffold0419 (424-907)||(9947-10430)
scaffold0419 (176-320)||(9699-9843)
scaffold0419 (961-1015)||(10464-10518)
[»] scaffold0003 (1 HSPs)
scaffold0003 (191-543)||(61786-62138)
[»] chr4 (36 HSPs)
chr4 (191-543)||(18075978-18076330)
chr4 (191-471)||(18721811-18722091)
chr4 (191-471)||(18729233-18729513)
chr4 (191-471)||(18677297-18677577)
chr4 (191-471)||(18653215-18653495)
chr4 (191-314)||(18687509-18687632)
chr4 (191-471)||(18697140-18697420)
chr4 (862-1141)||(18696488-18696761)
chr4 (801-936)||(18721359-18721493)
chr4 (862-936)||(18652763-18652836)
chr4 (862-936)||(18676845-18676918)
chr4 (862-936)||(18686894-18686967)
chr4 (727-770)||(18687059-18687102)
chr4 (801-907)||(18728809-18728915)
chr4 (727-768)||(18682169-18682210)
chr4 (727-768)||(18726445-18726486)
chr4 (730-770)||(18696853-18696893)
chr4 (801-947)||(18726268-18726412)
chr4 (862-947)||(18682036-18682120)
chr4 (495-536)||(18682391-18682432)
chr4 (495-536)||(18726667-18726708)
chr4 (570-602)||(18682337-18682369)
chr4 (570-602)||(18726613-18726645)
chr4 (256-315)||(5088934-5088993)
chr4 (727-766)||(18677014-18677053)
chr4 (506-536)||(18687287-18687317)
chr4 (433-471)||(18687352-18687390)
chr4 (506-536)||(18697075-18697105)
chr4 (54-124)||(18697531-18697601)
chr4 (506-536)||(18721746-18721776)
chr4 (730-768)||(18728948-18728986)
chr4 (727-768)||(18652930-18652971)
chr4 (570-627)||(18653071-18653128)
chr4 (507-536)||(18677232-18677261)
chr4 (570-627)||(18721667-18721724)
chr4 (570-627)||(18729089-18729146)
[»] scaffold0277 (4 HSPs)
scaffold0277 (424-1015)||(1868-2439)
scaffold0277 (176-320)||(2543-2687)
scaffold0277 (193-907)||(10919-11633)
scaffold0277 (961-1015)||(10831-10885)
[»] scaffold1870 (2 HSPs)
scaffold1870 (176-320)||(980-1124)
scaffold1870 (424-471)||(1228-1275)
[»] scaffold0349 (3 HSPs)
scaffold0349 (176-314)||(15449-15587)
scaffold0349 (429-543)||(15702-15816)
scaffold0349 (727-918)||(15997-16187)
[»] chr8 (7 HSPs)
chr8 (727-907)||(22023991-22024171)
chr8 (176-314)||(22023440-22023578)
chr8 (191-314)||(29271697-29271820)
chr8 (424-543)||(29271468-29271587)
chr8 (404-549)||(22023671-22023814)
chr8 (656-833)||(29271181-29271358)
chr8 (54-124)||(22023273-22023343)
[»] chr2 (2 HSPs)
chr2 (176-538)||(17990853-17991215)
chr2 (31-124)||(17991277-17991370)
[»] scaffold0038 (2 HSPs)
scaffold0038 (256-326)||(38760-38830)
scaffold0038 (256-326)||(45738-45808)


Alignment Details
Target: chr6 (Bit Score: 698; Significance: 0; HSPs: 94)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 698; E-Value: 0
Query Start/End: Original strand, 176 - 1388
Target Start/End: Complemental strand, 27602719 - 27601510
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    |||||||||||||||||||||||||||||| |||| ||  || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27602719 tgcagaagttcaactatatgaaagtattgaaattgaacagttgtcaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 27602620  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagt 375  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||       ||||||||| ||||||||   | |||||||||||||||||||    
T  27602619 gtttcaattttgtgagaatttaattacaattcacaattcagttggattcctaaacagacttgaaatcttagatgcaaaatattgcatcaagctccagagt 27602520  T
Q  376 tttccacctttacaactaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattata 475  Q
     |||||||||||||||| ||||||||| ||| ||||||||||   | |||| ||||||||||||||||||||||||||||||||||||||| |||||  |    
T  27602519 gttccacctttacaactgccctgtcttaagagattggaactcgccatgtgtaagagtctcaagagttttccagaattattatgcaagatgacaaatttaa 27602420  T
Q  476 aagattttatgttgcacgaaacttgcataggagaattgccattttcatttcaaaatctcagtgaacttgatcgcttagaaataattggctgtcgaatgct 575  Q
    ||||| ||  |||| | ||||||||||| |   |||| ||||||||| ||||||||||||||||||||||||||||| |||||  |   ||| |||||||    
T  27602419 aagatatttggttgaatgaaacttgcatgg---aatttccattttcaattcaaaatctcagtgaacttgatcgcttacaaatatatcaatgtggaatgct 27602323  T
Q  576 caggttcccaaaacataatgataaaatcaattttatggtattttcaaatgtgcaccatcttagaattgaaaagagcaacctctcagatgaatttctccaa 675  Q
    ||||||||||||||| ||||||||||| |||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  27602322 caggttcccaaaacaaaatgataaaatgaattctatagtattttcaaatgtgaaccatcttagaattgaaaagagcaacctctcagatgaatttctccga 27602223  T
Q  676 atacttttgatgtggtgtgttagtgtggaaaatctatacttatctaagacaaatttcaaaactcttcccgagtgccttagtgaatgtcaccttcttaaat 775  Q
    |||||| | ||||||||||||| |||||||||||||  ||||||| |||  |||||||||| |||||| ||||||||||||||||||||||||||||||     
T  27602222 atacttctaatgtggtgtgttaatgtggaaaatctagtcttatctgagagcaatttcaaaattcttcctgagtgccttagtgaatgtcaccttcttaaaa 27602123  T
Q  776 gcattaatgtggatggctgcaagtttcttgaggaaattacagggtttccaccaaatcttgaaagatttcacgcagaggaatgttattcattgagttcctc 875  Q
     |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||| ||| |||| ||| | ||||||||||||||    
T  27602122 acatttatgtggatggctgcaagtttcttgaggaaattagagggtttccaccaaatcttaaaatatttcatgcaaaggactgtgaatcattgagttcctc 27602023  T
Q  876 aagtagacgattgttattgagtcaggtttgtttgttgttttatcgtgcagtaatatttgatggatagtatttgatattgatatataatcgataatgtaat 975  Q
    ||||||| || |||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  27602022 aagtagaagaatgttattgagtcaggtttgtttgttgttttattgtgcagtagtatttgatagatagtatttgatattgatatataatcgataatgtaat 27601923  T
Q  976 acatcttattctaaactaacaggagctacacgaggctggacacacggaattttattttccaaccggaagtgaggggattccaaattggttcgagtatcaa 1075  Q
    |||||||||||| ||||||||| | |||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27601922 acatcttattcttaactaacagcaactacacaaggctggacacacggatttttattttccaactggaagtgaggggattccaaattggttcgagtatcaa 27601823  T
Q  1076 atcagggtaaaccaaccaatttctttctcgtttcatgaaaagatcccttgtataacttgtattattcttaatccagaatctgtgaagattccacaagtca 1175  Q
    |||| ||| ||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  27601822 atcaaggttaacgaaccaatttctttctcttttcatggaaagatcccttgtataacttgtattattcttaatccagaatctgtggagattccacaagtca 27601723  T
Q  1176 atgtttatgtaaatggctatcaatgtcatcttcctttccaattaacctatgaatatatacgtctgccgtcggaacatacatttttgtttgatctggaatt 1275  Q
    || | | | |||||||  || |||||| ||||| ||   |||||| ||||||| || ||| |||||||||| |||||||||||||||||||||||| |||    
T  27601722 atttgtttctaaatggtgatgaatgtcctcttcattgggaattaaactatgaaaatgtacttctgccgtcgaaacatacatttttgtttgatctgggatt 27601623  T
Q  1276 aaaactacatatttacaacactttcgaagatatgcctgaaatgatacaaacaattaaaaaagaggacttgaatcatgtggagcttagttgggagaaagat 1375  Q
    ||||  || ||||||| ||| |||  |  |||||||||||||||||| ||||||||||||| | || ||||||||||||||| ||  |||||||||||||    
T  27601622 aaaatcacgtatttacgacaattttaaccatatgcctgaaatgatacgaacaattaaaaaaaatgaattgaatcatgtggagattgattgggagaaagat 27601523  T
Q  1376 gatgtccatctca 1388  Q
    ||| | |||||||    
T  27601522 gatttacatctca 27601510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 176 - 907
Target Start/End: Original strand, 25513039 - 25513770
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||| ||||||||||||||||||| ||||||||| |   || ||||||||||||||| |||||||||||||| || ||||||||| |||||||||| |     
T  25513039 tgcaggagttcaactatatgaaagtcttgacattgaatttttgtgaatatttaacccatatacccgatgtctcgggtcttccaaatctagaaaagttctt 25513138  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagt 375  Q
     |||| || |||| | | ||||||||||||||||| |||  ||||   |||       ||||||||| || || || |   ||||| ||| |   ||  |    
T  25513139 atttcgatattgtgatagtttaattacaattcacatttcgattggacacctaaataaacttgaaatcttaaatacatgtggttgcagcaaacctgagctt 25513238  T
Q  376 tttccacctttacaactaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattata 475  Q
    || ||||| ||||| || |||| |||| ||||||| ||| ||| |  |||| |||||||||||| |||||||||||||||||| ||||||| ||||   |    
T  25513239 ttcccacccttacagctgccctctcttaagaaatttgaaatctctgggtgtaagagtctcaagaattttccagaattattatgtaagatgacaaatataa 25513338  T
Q  476 aagattttatgttgcacgaaacttgcataggagaattgccattttcatttcaaaatctcagtgaacttgatcgcttagaaataattggctgtcgaatgct 575  Q
    ||||| ||  | |  | || |||| ||||| ||||||||||| ||||||||||||| ||||||||||| | || |||  ||||  |||  |  ||| |||    
T  25513339 aagatattgagatatatgatacttccatagaagaattgccatcttcatttcaaaatttcagtgaactttaacggttaacaatatctggaggaggaaagct 25513438  T
Q  576 caggttcccaaaacataatgataaaatcaattttatggtattttcaaatgtgcaccatcttagaattga-aaagagcaacctctcagatgaatttctcca 674  Q
    ||||||||||||| ||||||||||||| ||||  || || |||||||||||| | |||||| ||  | |   | | |||| |||||||||||| |||||     
T  25513439 caggttcccaaaatataatgataaaatgaattcaatagtgttttcaaatgtggaacatctt-gacctcagtgacaacaacgtctcagatgaatgtctccc 25513537  T
Q  675 aatacttttgatgtggtgtgttagtgtggaaaatctatacttatctaagacaaatttcaaaactcttcccgagtgccttagtgaatgtcaccttcttaaa 774  Q
    ||||||| | | ||||| ||||| ||||  |  |||| |||||||  |||  ||||||| || |||||||||||||||| |||||| ||||| ||||||     
T  25513538 aatacttctcaagtggtttgttaatgtgacatttctagacttatcggagaacaatttcacaattcttcccgagtgccttggtgaatatcaccgtcttaag 25513637  T
Q  775 tgcattaatgtggatggctgcaagtttcttgaggaaattacagggtttccaccaaatcttgaaagatttcacgcagaggaatgttattcattgagttcct 874  Q
        || || || |    ||||||  |||||||||||||| |||| |||||||||||||||||||  ||   ||||| || |||||||||||||||||||    
T  25513638 catctttatttgaagttttgcaaggctcttgaggaaattagagggattccaccaaatcttgaaaggctttttgcagacgagtgttattcattgagttcct 25513737  T
Q  875 caagtagacgattgttattgagtcaggtttgtt 907  Q
    |||||| | || ||||| |||||||||||||||    
T  25513738 caagtataagaatgttaatgagtcaggtttgtt 25513770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 9e-52
Query Start/End: Original strand, 176 - 924
Target Start/End: Original strand, 26648646 - 26649387
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||||||||| |  |||||||||| ||||||||| ||  || |||||||||||| || ||||| ||||||||||  |||| ||||||||||||||| ||    
T  26648646 tgcagaagttccagaatatgaaagtcttgacattgaactgttgtgaatatttaactcatatacctgatgtctcagatcttcaaaatttagaaaagttctc 26648745  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagt 375  Q
     |||   |||||||||||||||||||||||| || | ||| |||||  |||       ||||||| | |||||||||| | ||||| ||||||| || ||    
T  26648746 atttatgttttgtaagaatttaattacaattgacgactcaattgggcacctaaataaacttgaaagcttagatgcaggttgttgcagcaagctcaagcgt 26648845  T
Q  376 tttccacctttacaactaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattata 475  Q
    |||||||| |||    |  | | |||| || |||||||||||  |   ||||||||||| |||| ||||||||||||||||||||| |||| ||||   |    
T  26648846 tttccacccttagggttgacatctcttaagcaattggaactcagtggttgtgagagtctaaagaattttccagaattattatgcaaaatgagaaatataa 26648945  T
Q  476 aagattttatgttgcacgaaacttgcataggagaattgccattttcatttcaaaatctcagtgaacttgatcgcttagaaataattggctgtcgaatgct 575  Q
    || || || | |||     |||||  |||||||||||||||| ||||||||| |||||||||||||||  | | ||| | ||| |||      ||||| |    
T  26648946 aacatatttttttgtctagaacttcaataggagaattgccatcttcatttcataatctcagtgaacttcgtagtttacacatatttg------gaatgtt 26649039  T
Q  576 caggttcccaaaacataatgataaaatcaattttatggtattttcaaatgtgcaccatcttagaattgaaaagagcaacctctcagatgaatttctccaa 675  Q
     ||||||||||||| ||||||||||||  ||| | | || |||||||||||| | ||||||    | |||||  |||||||||  ||||||  ||||| |    
T  26649040 taggttcccaaaacctaatgataaaatttattctgtagtgttttcaaatgtggatcatcttgttctcgaaaattgcaacctctttgatgaaagtctccta 26649139  T
Q  676 atacttttgatgtggtgtgttagtgtggaaaatctatacttatctaagacaaatttcaaaactcttcccgagtgccttagtgaatgtcaccttcttaaat 775  Q
    ||| || | |  |||||||||| | || ||||||||  |||| | ||||  |||||||||| ||||||||||| ||||||||||||||||| ||||        
T  26649140 ataattctcaaatggtgtgttaatctgaaaaatctagtcttagcaaagaacaatttcaaaattcttcccgagttccttagtgaatgtcaccatcttgttg 26649239  T
Q  776 gcattaatgtggatggctgcaagtttcttgaggaaattacagggtttccaccaaatcttgaaagatttcacgcagaggaatgttattcattgagttcctc 875  Q
      ||||  ||||| ||||| |  | ||||||||||||||  ||| |||||||||||||| || |  ||   |||  |  |||| | ||||||||||||||    
T  26649240 aaattatcgtggacggctgtacctctcttgaggaaattagggggattccaccaaatcttaaatggctttctgcattgagatgtgaatcattgagttcctc 26649339  T
Q  876 aagtagacgattgttattgagtcaggtttgtttgttgttttatcgtgca 924  Q
    ||||||| || ||||||||||||||||| | ||||||||||||| ||||    
T  26649340 aagtagaagaatgttattgagtcaggttcg-ttgttgttttatcttgca 26649387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 9e-52
Query Start/End: Original strand, 176 - 924
Target Start/End: Original strand, 26754614 - 26755355
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||||||||| |  |||||||||| ||||||||| ||  || |||||||||||| || ||||| ||||||||||  |||| ||||||||||||||| ||    
T  26754614 tgcagaagttccagaatatgaaagtcttgacattgaactgttgtgaatatttaactcatatacctgatgtctcagatcttcaaaatttagaaaagttctc 26754713  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagt 375  Q
     |||   |||||||||||||||||||||||| || | ||| |||||  |||       ||||||| | |||||||||| | ||||| ||||||| || ||    
T  26754714 atttatgttttgtaagaatttaattacaattgacgactcaattgggcacctaaataaacttgaaagcttagatgcaggttgttgcagcaagctcaagcgt 26754813  T
Q  376 tttccacctttacaactaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattata 475  Q
    |||||||| |||    |  | | |||| || |||||||||||  |   ||||||||||| |||| ||||||||||||||||||||| |||| ||||   |    
T  26754814 tttccacccttagggttgacatctcttaagcaattggaactcagtggttgtgagagtctaaagaattttccagaattattatgcaaaatgagaaatataa 26754913  T
Q  476 aagattttatgttgcacgaaacttgcataggagaattgccattttcatttcaaaatctcagtgaacttgatcgcttagaaataattggctgtcgaatgct 575  Q
    || || || | |||     |||||  |||||||||||||||| ||||||||| |||||||||||||||  | | ||| | ||| |||      ||||| |    
T  26754914 aacatatttttttgtctagaacttcaataggagaattgccatcttcatttcataatctcagtgaacttcgtagtttacacatatttg------gaatgtt 26755007  T
Q  576 caggttcccaaaacataatgataaaatcaattttatggtattttcaaatgtgcaccatcttagaattgaaaagagcaacctctcagatgaatttctccaa 675  Q
     ||||||||||||| ||||||||||||  ||| | | || |||||||||||| | ||||||    | |||||  |||||||||  ||||||  ||||| |    
T  26755008 taggttcccaaaacctaatgataaaatttattctgtagtgttttcaaatgtggatcatcttgttctcgaaaattgcaacctctttgatgaaagtctccta 26755107  T
Q  676 atacttttgatgtggtgtgttagtgtggaaaatctatacttatctaagacaaatttcaaaactcttcccgagtgccttagtgaatgtcaccttcttaaat 775  Q
    ||| || | |  |||||||||| | || ||||||||  |||| | ||||  |||||||||| ||||||||||| ||||||||||||||||| ||||        
T  26755108 ataattctcaaatggtgtgttaatctgaaaaatctagtcttagcaaagaacaatttcaaaattcttcccgagttccttagtgaatgtcaccatcttgttg 26755207  T
Q  776 gcattaatgtggatggctgcaagtttcttgaggaaattacagggtttccaccaaatcttgaaagatttcacgcagaggaatgttattcattgagttcctc 875  Q
      ||||  ||||| ||||| |  | ||||||||||||||  ||| |||||||||||||| || |  ||   |||  |  |||| | ||||||||||||||    
T  26755208 aaattatcgtggacggctgtacctctcttgaggaaattagggggattccaccaaatcttaaatggctttctgcattgagatgtgaatcattgagttcctc 26755307  T
Q  876 aagtagacgattgttattgagtcaggtttgtttgttgttttatcgtgca 924  Q
    ||||||| || ||||||||||||||||| | ||||||||||||| ||||    
T  26755308 aagtagaagaatgttattgagtcaggttcg-ttgttgttttatcttgca 26755355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 177 - 907
Target Start/End: Original strand, 31286741 - 31287474
Alignment:
Q  177 gcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatcg 276  Q
    |||||||||| |  |||||||||| |||||||||||| ||| |||||||||||| || ||||| ||||||||||| ||| ||||| |||| ||||| ||     
T  31286741 gcagaagttccagaatatgaaagtcttgacattggacgattgtgaatatttaacacatatacctgatgtctcaggtctttcaaatatagagaagttctca 31286840  T
Q  277 tttcaattttgtaagaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagtt 376  Q
    ||| |||||||||  ||||||||||||||| || ||||| ||||   ||        |||||| |||||  ||||     ||||| ||||||| || |||    
T  31286841 tttaaattttgtagaaatttaattacaattgacgattcaattggccaccaaaataaacttgaattcataagtgcaattggttgcagcaagctcaagcgtt 31286940  T
Q  377 ttccacctttacaactaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattataa 476  Q
    ||||||| |||    |  | | |||| || |||||||||||| |   |||| ||||||||| |||||||||||||||||||||||||||| ||||   ||    
T  31286941 ttccacccttaggtttggcatctcttaaggaattggaactctctttttgtgtgagtctcaatagttttccagaattattatgcaagatgacaaatataaa 31287040  T
Q  477 agattttatgttgcacgaaacttgcataggagaattgccattttcatttcaaaatctcagtgaacttgatcgcttagaaataattggctgtcgaatgctc 576  Q
    |  | || ||||     | |||| ||||||||||||||||| ||||||||||||||||||||||||| ||  | ||  ||||    | ||| |||||||     
T  31287041 acgtattttgtttgttaatacttccataggagaattgccatcttcatttcaaaatctcagtgaacttaatgacatatcaatagagagatgtggaatgctg 31287140  T
Q  577 aggttcccaaaacataatgataaaatcaattttatggtattttcaaatgtgcaccatcttagaattgaaaagagcaacctctcagatgaatttctccaaa 676  Q
    |||||||||||||||||||| ||||| |||| ||| || ||||||||||||   || |||||  |  ||||  |||||||||||||||||| | | | ||    
T  31287141 aggttcccaaaacataatgacaaaattaattctatagtgttttcaaatgtgacacagcttagtctccaaaattgcaacctctcagatgaatgtttaccaa 31287240  T
Q  677 tacttttgatgtggtgtgttagtgtggaaaatctatacttatc---taagacaaatttcaaaactcttcccgagtgccttagtgaatgtcaccttcttaa 773  Q
    ||||| | | ||||| ||||| |||| |||  ||| |||||||   |||    |||||||| | |||||||||||| |||| ||||||||||||| | ||    
T  31287241 tacttctcaagtggtttgttaatgtgaaaaggctagacttatcgcataacttcaatttcaatattcttcccgagtgtcttaatgaatgtcaccttatgaa 31287340  T
Q  774 atgcattaatgtggatggctgcaagtttcttgaggaaattacagggtttccaccaaatcttgaa-agatttcacgcagaggaatgttattcattgagttc 872  Q
       | || |  | ||| | ||||||| |||||||||||||| |||| ||||||||||||||||| || |||| |||  |  ||||| | || ||||||||    
T  31287341 gatctttgaattcgattgttgcaagtctcttgaggaaattagagggattccaccaaatcttgaagagctttc-cgcttataaatgtgaatcgttgagttc 31287439  T
Q  873 ctcaagtagacgattgttattgagtcaggtttgtt 907  Q
    |||||||||| || |||||  ||||||||||||||    
T  31287440 ctcaagtagaagaatgttaacgagtcaggtttgtt 31287474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 184 - 543
Target Start/End: Original strand, 25076023 - 25076382
Alignment:
Q  184 ttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatcgtttcaat 283  Q
    ||||||||||||||||| |||| |||| |||||| | | | |||||| || ||||||||||||||||| |||||||||||||||||| | || ||  ||     
T  25076023 ttcaactatatgaaagtcttgatattgaaccatttttactctttaactcatatacccgatgtctcaggtcttccaaatttagaaaagatctcattaaaaa 25076122  T
Q  284 tttgtaagaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagttttccacc 383  Q
      |||  ||| ||||||||||||||||||||| |||| | |||       |||||||||||| ||||| |    |||   |||||| | |||||||||||    
T  25076123 agtgttggaacttaattacaattcacaattcaattggatgcctaagtaaacttgaaatcataaatgcaaggaaatgctataagctcaaaagttttccacc 25076222  T
Q  384 tttacaactaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattataaagatttt 483  Q
     ||||  || |||| |||| || ||||| |||| | | |||||  ||||||||||||||||||||||||||| |||||||||| |||||  |||  | ||    
T  25076223 cttacggctgccctctcttaaggaattgaaactttctgagtgttggagtctcaagagttttccagaattattgtgcaagatgacaaatttgaaaagtatt 25076322  T
Q  484 atgttgcacgaaacttgcataggagaattgccattttcatttcaaaatctcagtgaactt 543  Q
     ||||| |||  |||| |||||||||||||||||||||||||||||||||||||||||||    
T  25076323 ttgttggacggtacttccataggagaattgccattttcatttcaaaatctcagtgaactt 25076382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 176 - 543
Target Start/End: Original strand, 26850833 - 26851200
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    |||||||||||||| | || |||   ||||||||||||  |||| ||||||||||||| ||| | |||||||| ||||||||||||||||||||| | ||    
T  26850833 tgcagaagttcaacaacattaaaaacttgacattggacggttctaaatatttaacccatatatctgatgtctctggacttccaaatttagaaaagctctc 26850932  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagt 375  Q
     ||||| | |||| | | |||||||||||||||||||||| |||||| |||       ||||||||| |||||||| |   ||||| ||||||  |||||    
T  26850933 atttcattgttgtcatagtttaattacaattcacaattcaattgggtacctgattaaacttgaaatcttagatgcatggggttgcaacaagcttgagagt 26851032  T
Q  376 tttccacctttacaactaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattata 475  Q
    |||||||| |||||| | |||| |||| || |||||  | | | || ||||  ||||||||||| |||||||||||||||||||||||||| ||| ||||    
T  26851033 tttccacccttacaattgccctctcttaaggaattgatattatctaggtgttcgagtctcaagaattttccagaattattatgcaagatgacaaa-tata 26851131  T
Q  476 -aagattttatgttgcacgaaacttgcataggagaattgccattttcatttcaaaatctcagtgaactt 543  Q
     ||||  ||  ||| ||    |||| ||||||||||||||||| ||||||| |||||||||||||||||    
T  26851132 gaagagattgagttacatcgtacttccataggagaattgccatcttcatttaaaaatctcagtgaactt 26851200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 176 - 907
Target Start/End: Original strand, 25547132 - 25547875
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||| ||||||||||||||||||| |||| |||||| | || ||||||||||||||| ||||| |||||||| || |||| |||| |||||||||  ||    
T  25547132 tgcaggagttcaactatatgaaagtcttgatattggatctttgtgaatatttaacccatatacctgatgtctcgggtcttcgaaatctagaaaagtgctc 25547231  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagt 375  Q
     |||| |   ||| | | ||||||||||||||||| |||  ||||   |||       ||||||||| || |||||     |||| |  ||||  ||  |    
T  25547232 ctttcgagaatgtcatagtttaattacaattcacagttcgattggacacctaaataaacttgaaatcttaaatgcatatggttgcttagagcttgagcat 25547331  T
Q  376 tttccacctttacaactaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattata 475  Q
    || ||||| ||||| || |||| |||| ||||||| ||| ||| | | |||||||||||||||| |||||||||||||||||||||||||| ||||   |    
T  25547332 ttcccacccttacagctgccctctcttaagaaatttgaaatctcttattgtgagagtctcaagaattttccagaattattatgcaagatgacaaatataa 25547431  T
Q  476 aagattttatgttgcacgaaacttgcataggagaattgccattttcatttcaaaatctcagtgaacttgatcgcttagaaataattggct---------g 566  Q
    ||||| | | | |  | || ||||  |||| ||||||||| | ||||||||||||| ||||||||||| | || |||  ||||  ||| |         |    
T  25547432 aagatatcaagatatatgatacttctatagaagaattgccgtattcatttcaaaatttcagtgaacttcaacggttaacaatatctggatacgacctagg 25547531  T
Q  567 tcgaatgctcaggttcccaaaacataatgataaaatcaattttatggtattttcaaatgtgcaccatcttagaattga-aaagagcaacctctcagatga 665  Q
      ||| |||||||||||||||| ||||||||||||| ||||  || || |||||||||||| | ||| || ||  | | ||| | |||||||||||||||    
T  25547532 gggaaagctcaggttcccaaaatataatgataaaatgaattcaatagtgttttcaaatgtggaacatgtt-gacctcagaaacaacaacctctcagatga 25547630  T
Q  666 atttctccaaatacttttgatgtggtgtgttagtgtggaaaatctatacttatctaagaca---aatttcaaaactcttcccgagtgccttagtgaatgt 762  Q
    || ||||| ||||||| | | ||||| ||||| ||||  |  |||| |||||||  |||     ||||||| || |||||| ||||||||||| ||||||    
T  25547631 atgtctcccaatacttctcaagtggtttgttaatgtgacatttctagacttatcggagaacgataatttcacaattcttcctgagtgccttagcgaatgt 25547730  T
Q  763 caccttcttaaatgcattaatgtggatggctgcaagtttcttgaggaaattacagggtttccaccaaatcttgaaagatttcacgcagaggaatgttatt 862  Q
    |||| |||||||    || || || |   |||||| |||||||||||||||| |||| |||||||||||||||||||  ||   ||||| || |||||||    
T  25547731 caccatcttaaacaactttatttgaagaactgcaattttcttgaggaaattagagggattccaccaaatcttgaaaggctttttgcagacgagtgttatt 25547830  T
Q  863 cattgagttcctcaagtagacgattgttattgagtcaggtttgtt 907  Q
    |||||||||||||||||| | || ||||| |||||||||||||||    
T  25547831 cattgagttcctcaagtataagaatgttaatgagtcaggtttgtt 25547875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 27602878 - 27602753
Alignment:
Q  17 agtttgagatattggaaatggaatggttgtcctttgaagtctctatcatcttgtattttgaataaggcaagtgaaataagttcagttttcaattgtgcat 116  Q
    |||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||| ||    
T  27602878 agtttgagattttgcaaatggaatggttgtccttcgaagtctctatcatcttgtattttgaacaaggcaagtgaaataaattcatttttcaattgtgtat 27602779  T
Q  117 atttataattcactattagataataa 142  Q
    ||||||||||||||||||||| ||||    
T  27602778 atttataattcactattagattataa 27602753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 176 - 543
Target Start/End: Original strand, 26863772 - 26864139
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||||||||| |  |||||||||| |||| ||||||| ||| |||||||||||||   |||||| ||||||| |  |||||||||||||||||||| |     
T  26863772 tgcagaagttcgagaatatgaaagtcttgatattggactattgtgaatatttaacctgtatacccaatgtctccgatcttccaaatttagaaaagttgtt 26863871  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagt 375  Q
    ||||  |  |||| | |||||||||||||||||||| ||  |||||| |||       ||||||| | ||  ||||   | ||||| ||||||| |||||    
T  26863872 gtttataaattgtcataatttaattacaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagt 26863971  T
Q  376 tttccacctttacaactaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattata 475  Q
    |||||||| |||||| |  | | |||| ||| ||||||||||||| |||||   || |||||||||||||||||||||||||||||||||| ||||   |    
T  26863972 tttccacccttacaattggcatctcttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataa 26864071  T
Q  476 aagattttatgttgcacgaaacttgcataggagaattgccattttcatttcaaaatctcagtgaactt 543  Q
    ||||  |   ||||   ||||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  26864072 aagagatccggttgtctgaaacttccataagagaattgtcattttcatttcaaaatctcagtgaactt 26864139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 89; E-Value: 3e-42
Query Start/End: Original strand, 176 - 936
Target Start/End: Original strand, 26886270 - 26887032
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||||||||| |||  |||||||| |||||||| ||| ||| |||||||||||||||  ||||| |||||||||| |||| ||||||||||||||| ||    
T  26886270 tgcagaagttcgacttcatgaaagtcttgacatttgacaattgtgaatatttaacccatgtacccaatgtctcaggtcttctaaatttagaaaagttctc 26886369  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagt 375  Q
      || ||    |||| |||||||||||||||||| ||||  |||||   ||       ||||||||| || ||||       |||||||||||  |||||    
T  26886370 agttgaaaagagtaataatttaattacaattcacgattcgattgggaagctaaataaacttgaaatcttaaatgcgaagaaatgcatcaagcttgagagt 26886469  T
Q  376 tttccacctttacaactaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattata 475  Q
    |||||||| ||||| || |||| |||  || |||| ||||||| | | |||  |||||||||||  || |||||||||||||||||||||| |||||  |    
T  26886470 tttccacccttacagctgccctctctcaaggaatttgaactctcttattgtaggagtctcaagaaattcccagaattattatgcaagatgacaaatttaa 26886569  T
Q  476 aagattttatgttgc---acgaaacttgcataggagaattgccattttcatttcaaaatctcagtgaacttgatcgcttagaaataattggctgtcgaat 572  Q
    ||||  ||  ||| |   |  | |||| |||||||| |||||||||||||||| |||||||||||||||||  || | ||  ||||  | |  || ||||    
T  26886570 aagagattgcgttacataataacacttccataggaggattgccattttcatttgaaaatctcagtgaacttcgtcacgtaacaatatatcgaagtggaat 26886669  T
Q  573 gctcaggttcccaaaacataatgataaaatcaattttatggtattttcaaatgtgcaccatcttagaattgaaaagagcaacctctcagatgaatttctc 672  Q
    | | |||||||||||||||| ||| |||||  ||  ||| ||||||||||||||| |   ||||  | |  |  | ||||| ||||||  ||||| |||     
T  26886670 gttaaggttcccaaaacatattgacaaaatgtatcctatagtattttcaaatgtggaatctctttcactctacgaaagcaatctctcatttgaatgtctt 26886769  T
Q  673 caaatacttttgatgtggtgtgttagtgtggaaaatctatacttatctaagacaaatttcaaaactcttcccgagtgccttagtgaatgtcaccttctta 772  Q
    | ||| ||| | | ||||| ||||| |||| || ||||| ||||||| ||||  |||||||||| |||||||||||||||||  ||||||||||||||||    
T  26886770 ccaatgcttctcaagtggtttgttaatgtgaaacatctagacttatcaaagaacaatttcaaaattcttcccgagtgccttaaggaatgtcaccttctta 26886869  T
Q  773 -aatgcattaatgtggatggctgcaagtttcttgaggaaattacagggtttccaccaaatcttgaaaga--tttcacgcagaggaatgttattcattgag 869  Q
      || | | ||| || ||   ||||||| |||||||||||||| |||| | |||||||||||| |||||  ||||  ||     ||||  ||||||||||    
T  26886870 ggatacttgaat-tgaatcattgcaagtctcttgaggaaattagagggataccaccaaatctt-aaagacctttc-tgctataaaatgccattcattgag 26886966  T
Q  870 ttcctcaagtagacgattgttattgagtcaggtttgtttgttgttttatcgtgcagtaatatttgat 936  Q
    ||||||||||||| || |||||||||||||||||||||| ||||| |||| |||| || ||||||||    
T  26886967 ttcctcaagtagaagaatgttattgagtcaggtttgttt-ttgttctatcttgcaatagtatttgat 26887032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 89; E-Value: 3e-42
Query Start/End: Original strand, 179 - 552
Target Start/End: Original strand, 26951944 - 26952317
Alignment:
Q  179 agaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatcgtt 278  Q
    ||||||||||| | |||||| | |||||||||||| ||  ||| |||||||| || ||||||||||||||||| |||||||||||| |||| || || ||    
T  26951944 agaagttcaacaacatgaaaatcttgacattggacaatagtgactatttaactcatatacccgatgtctcaggtcttccaaatttaaaaaacttctcatt 26952043  T
Q  279 tcaattttgtaagaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagtttt 378  Q
    ||||  ||||   |  |||||||||||||||||||| ||||||| |||       ||| ||||| || |||| |  |  |||    ||||  ||||||||    
T  26952044 tcaaggttgtgttaggttaattacaattcacaattcggttgggtacctaaataaacttaaaatcttaaatgccgagtactgcgagcagcttgagagtttt 26952143  T
Q  379 ccacctttacaactaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattataaag 478  Q
    ||| | |||||  | |||| ||||||| ||||| |||||| | ||||||||||||||||||| ||||||||||||||||||||||||| ||||   ||||    
T  26952144 ccatccttacagttgccctctcttgaggaattgaaactctctgagtgtgagagtctcaagagctttccagaattattatgcaagatgacaaatataaaag 26952243  T
Q  479 attttatgttgcacgaaacttgcataggagaattgccattttcatttcaaaatctcagtgaacttgatcgctta 552  Q
    |  ||| | |  | ||||| | |||||||||||||||||||||||||  ||||||||||||||||  |||||||    
T  26952244 agattacgatatatgaaacatccataggagaattgccattttcatttggaaatctcagtgaacttcgtcgctta 26952317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 5e-38
Query Start/End: Original strand, 379 - 907
Target Start/End: Original strand, 26145364 - 26145892
Alignment:
Q  379 ccacctttacaactaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattataaag 478  Q
    ||||| ||||| || |||| |||| ||||||| ||| ||| |   |||||||||||||||| |||||||||||||||||| ||||||| ||||   ||||    
T  26145364 ccacccttacagctgccctctcttaagaaatttgaaatctctggttgtgagagtctcaagaattttccagaattattatgtaagatgacaaatataaaag 26145463  T
Q  479 attttatgttgcacgaaacttgcataggagaattgccattttcatttcaaaatctcagtgaacttgatcgcttagaaataattggctgtcgaatgctcag 578  Q
    || ||  | |  | || |||| ||||| |||||||| || ||||||||||||| ||||||||||| | || |||  ||||  |||  |  ||| ||||||    
T  26145464 atattgagatatatgatacttccatagaagaattgcgatattcatttcaaaatttcagtgaacttcaacggttaacaatatctggagggggaaagctcag 26145563  T
Q  579 gttcccaaaacataatgataaaatcaattttatggtattttcaaatgtgcaccatcttagaattgaaa-agagcaacctctcagatgaatttctccaaat 677  Q
    |||||||||| ||||||||| ||| ||||  || || |||||||||||| | ||| || ||  | | | | | ||||||||| ||||||| ||||| |||    
T  26145564 gttcccaaaatataatgatacaatgaattcaatagtgttttcaaatgtggaacatgtt-gacctcagagacaacaacctctcggatgaatgtctcccaat 26145662  T
Q  678 acttttgatgtggtgtgttagtgtggaaaatctatacttatctaagacaaatttcaaaactcttcccgagtgccttagtgaatgtcaccttcttaaatgc 777  Q
    |||| | | ||||| ||||| ||||  |  |||| |||||||  |||   |||||| || |||||||||||||||| |||||||||||| ||||||        
T  26145663 acttctcaagtggtttgttaatgtgacatttctagacttatcggagaactatttcacaattcttcccgagtgccttggtgaatgtcaccgtcttaagcat 26145762  T
Q  778 attaatgtggatggctgcaagtttcttgaggaaattacagggtttccaccaaatcttgaaagatttcacgcagaggaatgttattcattgagttcctcaa 877  Q
     || || || |    ||| ||  |||||||||||||| |||| |||||||||||||||||||  ||   ||||| || ||||||||||||||||||||||    
T  26145763 ctttatttgaagttttgcgaggctcttgaggaaattagagggattccaccaaatcttgaaaggctttgtgcagacgagtgttattcattgagttcctcaa 26145862  T
Q  878 gtagacgattgttattgagtcaggtttgtt 907  Q
    ||| | || ||||| |||||||||||||||    
T  26145863 gtataagaatgttaatgagtcaggtttgtt 26145892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 80; E-Value: 7e-37
Query Start/End: Original strand, 357 - 834
Target Start/End: Original strand, 26979755 - 26980231
Alignment:
Q  357 ttgcatcaagctccagagttttccacctttacaactaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattatta 456  Q
    |||| |||||||| ||||||||||||| |||||  | |||| |||| || |||||||||||| | ||||||| |||||||| ||||||||||||||||||    
T  26979755 ttgcctcaagctcgagagttttccacccttacatttgccctctcttaaggaattggaactctctgagtgtgatagtctcaaaagttttccagaattatta 26979854  T
Q  457 tgcaagatgaaaaattataaagattttatgttgcacgaa-acttgcataggagaattgccattttcatttcaaaatctcagtgaacttgatcgcttagaa 555  Q
    ||  | |||||||| |||||| |   |  | | | | || |||| |||||||||||||||||||||||||||| |||||||||||||| || ||||||||    
T  26979855 tgtcaaatgaaaaa-tataaaaaagattgggttctctaatacttccataggagaattgccattttcatttcaatatctcagtgaacttcattgcttagaa 26979953  T
Q  556 ataattggctgtcgaatgctcaggttcccaaaacataatgataaaatcaattttatggtattttcaaatgtgcaccatcttagaattgaaaagagcaacc 655  Q
     ||  | |   | |||||||||||||||||||  ||||||||| ||| |||  | | || ||||||||  || |   | ||| | ||  | ||| |||||    
T  26979954 gtatatcgagttagaatgctcaggttcccaaagtataatgatagaatgaatcctgtagtgttttcaaaaatggatactgttatatttagagagaccaacc 26980053  T
Q  656 tctcagatgaatttctccaaatacttttgatgtggtgtgttagtgtggaaaatctatacttatctaagacaaatttcaaaactcttcccgagtgccttag 755  Q
    |||||||||||| ||||| ||||||| | | ||||| ||||| ||||  | || || |||||   || |  |||||||||| ||| || ||||||||||     
T  26980054 tctcagatgaatgtctcccaatacttctcaagtggtttgttaatgtgacatatttaaactta-agaacaacaatttcaaaattctacctgagtgccttaa 26980152  T
Q  756 tgaatgtcaccttctt-aaatgcattaatgtggatggctgcaagtttcttgaggaaattacagggtttccaccaaatctt 834  Q
    ||||||||||| ||||     || |  || |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  26980153 tgaatgtcaccatcttcggcagcttgtat-tggatggctgcaagtttcttgaggaaattagagggtttccaccaaatctt 26980231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 3e-36
Query Start/End: Original strand, 176 - 314
Target Start/End: Complemental strand, 27590979 - 27590841
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||||||||| |  |||||| | | |||| ||||||||||| |||||||||||| || ||||||||||||||||| ||| |||||||||||||||||||    
T  27590979 tgcagaagttccaggatatgacaatcttgatattggaccattgtgaatatttaacacatatacccgatgtctcagggctttcaaatttagaaaagttatc 27590880  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattc 314  Q
     ||| ||| ||||||||||||||||||||||||||||||    
T  27590879 atttgaatattgtaagaatttaattacaattcacaattc 27590841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 79; E-Value: 3e-36
Query Start/End: Original strand, 176 - 314
Target Start/End: Complemental strand, 27696587 - 27696449
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||||||||| |  |||||||| | |||||||||||| ||| |||||||||||| || ||||||||||||||| | ||| |||||||||||||||||||    
T  27696587 tgcagaagttccagaatatgaaaatcttgacattggacgattgtgaatatttaacacatatacccgatgtctcaagcctttcaaatttagaaaagttatc 27696488  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattc 314  Q
    |||| ||  ||||||||||||||||||||||||||||||    
T  27696487 gtttgaacattgtaagaatttaattacaattcacaattc 27696449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 76; E-Value: 2e-34
Query Start/End: Original strand, 191 - 543
Target Start/End: Complemental strand, 27425577 - 27425225
Alignment:
Q  191 atatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatcgtttcaattttgtaa 290  Q
    |||||||||| |||| ||| ||| ||| | || |||||| | | | ||||||||||||| | |||||||||||||||||||| ||||||  |   ||| |    
T  27425577 atatgaaagtgttgatattcgacaattgtcaagatttaatctatacacccgatgtctcatggcttccaaatttagaaaagttctcgtttgcaagatgtca 27425478  T
Q  291 gaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagttttccacctttacaa 390  Q
     |||||| ||||||||||||||||| || | | |||        | |||||| || ||||||    ||||   |||||| ||||||||||||| |||||     
T  27425477 taatttagttacaattcacaattcacttagatacctaaatagattagaaatcttaaatgcagagggttgcgagaagctcgagagttttccacccttacag 27425378  T
Q  391 ctaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattataaagattttatgttgc 490  Q
       |||| |||| |||| |||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||| ||||   |||  | |  |||||     
T  27425377 tctccctctcttcagaatttggaactctctaattgtaagagtctcaagagttttccagaattattatgcaagatgacaaatataaaatctatcttgttga 27425278  T
Q  491 acgaaacttgcataggagaattgccattttcatttcaaaatctcagtgaactt 543  Q
    | ||||||| |||||||||||| |||||||| ||||||||||| |||||||||    
T  27425277 aggaaacttccataggagaatttccattttcctttcaaaatcttagtgaactt 27425225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 76; E-Value: 2e-34
Query Start/End: Original strand, 191 - 471
Target Start/End: Complemental strand, 27529256 - 27528976
Alignment:
Q  191 atatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatcgtttcaattttgtaa 290  Q
    |||||||||| |||| |||| || ||| ||||||||||||||| ||||| ||||||||||| |||||||||||||||||||| ||||||  |   ||| |    
T  27529256 atatgaaagtcttgatattgaacaattgtgaatatttaacccatataccggatgtctcagggcttccaaatttagaaaagttctcgtttgtaagatgtca 27529157  T
Q  291 gaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagttttccacctttacaa 390  Q
     |||||| ||||||||||||||||| || | | |||        | |||||| || ||||||    ||||   |||||| ||||||||||||| |||||     
T  27529156 taatttagttacaattcacaattcacttagatacctaaatagattagaaatcttaaatgcagagggttgcgagaagctcgagagttttccacccttacag 27529057  T
Q  391 ctaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaat 471  Q
       |||| |||| ||||  ||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  27529056 tctccctctcttcagaatctggaactctctaattgtaagagtctcaagagttttccagaattattatgcaagatgacaaat 27528976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 76; E-Value: 2e-34
Query Start/End: Original strand, 191 - 314
Target Start/End: Original strand, 27681163 - 27681286
Alignment:
Q  191 atatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatcgtttcaattttgtaa 290  Q
    |||||||||| |||||||||||| ||| |||||||||||| || ||||||||||||||||| ||| |||||||||||||||||||||||  || |||| |    
T  27681163 atatgaaagtcttgacattggactattgtgaatatttaacacatatacccgatgtctcaggcctttcaaatttagaaaagttatcgtttacatgttgtga 27681262  T
Q  291 gaatttaattacaattcacaattc 314  Q
     |||||||||||||||||||||||    
T  27681263 taatttaattacaattcacaattc 27681286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 75; E-Value: 7e-34
Query Start/End: Original strand, 176 - 543
Target Start/End: Original strand, 25581871 - 25582238
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||| ||||||||||||||||||| |||| ||||||  ||  |  | |||||||||| |||||||||||||| || ||||||||| |||||||||  ||    
T  25581871 tgcaggagttcaactatatgaaagtcttgaaattggattatagttcagatttaacccatatacccgatgtctcgggtcttccaaatctagaaaagtgctc 25581970  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagt 375  Q
     ||||||||||||   | ||||||||||||||||| |||  ||||   |||       ||||||||| || |||||     ||||| ||| ||  ||  |    
T  25581971 atttcaattttgttttagtttaattacaattcacagttcgattggacacctaaataaacttgaaatcttaaatgcatatggttgcagcaaacttgagcat 25582070  T
Q  376 tttccacctttacaactaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattata 475  Q
    || ||||| ||||| || |||| |||| ||||||| ||| ||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||   |    
T  25582071 ttcccacccttacagctgccctctcttaagaaatttgaaatctctaagtgtgagagtctcaagaattttccagaattattatgcaagatgagaaatataa 25582170  T
Q  476 aagattttatgttgcacgaaacttgcataggagaattgccattttcatttcaaaatctcagtgaactt 543  Q
    ||||| | | | |  | |  | || ||||| ||||||||||| ||||||||||||| |||||||||||    
T  25582171 aagatatcaagatatatgccatttccatagaagaattgccatattcatttcaaaatttcagtgaactt 25582238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 75; E-Value: 7e-34
Query Start/End: Original strand, 176 - 773
Target Start/End: Original strand, 26658143 - 26658743
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||| |||||||  |||||||| |  ||||||||||| ||| ||||||||||||||| |||||| |||||||||| ||  |||||||||||||||| ||    
T  26658143 tgcaggagttcaataatatgaaattcatgacattggacgattgtgaatatttaacccatatacccaatgtctcaggtctctcaaatttagaaaagttctc 26658242  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagt 375  Q
     |||| |  ||||   ||||||||||||||||||||||||||||| | |||       ||||||||| ||||||||     |||||  ||| ||   |||    
T  26658243 atttcgaaattgtgctaatttaattacaattcacaattcagttggatacctaaataaacttgaaatcttagatgcatatggttgcagaaagatcgtaagt 26658342  T
Q  376 tttccacctttacaactaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattata 475  Q
    |||||||| ||||  || |||| |||| || ||||  |||||  |  |||| ||||||||||||  |||||||||||| |||||||||||  ||| ||||    
T  26658343 tttccacccttacggcttccctctcttaaggaatttcaactcagttggtgtaagagtctcaagaaatttccagaattactatgcaagatgtcaaa-tata 26658441  T
Q  476 a-agattttatgttgcacgaa--acttg-cataggagaattgccattttcatttcaaaatctcagtgaacttgatcgcttagaaataattggctgtcgaa 571  Q
    | |||  ||  |||    |||   |||| | ||| |||||| |||||| |||||||||||||||||||||||  |   ||||  ||||   | |||  ||    
T  26658442 agagaaattcagttaattgaatgtcttgacgtagaagaatttccatttccatttcaaaatctcagtgaacttagtgatttagtgataaacagatgtgaaa 26658541  T
Q  572 tgctcaggttcccaaaacataatgataaaatcaattttatggtattttcaaatgtgcaccatcttagaattgaa-aagagcaacctctcagatgaatttc 670  Q
    ||||||||||||||| |||  |||||||| |  |||| || || ||||||||||||||  ||  | ||  | || || ||||| ||||||||||| | ||    
T  26658542 tgctcaggttcccaagacacgatgataaattggatttcatagtgttttcaaatgtgca-aatgctcgatctcaataacagcaatctctcagatgactgtc 26658640  T
Q  671 tccaaatacttttgatgtggtgtgttagtgtggaaaatctatacttatctaagacaaatttcaaaactcttcccgagtgccttagtgaatgtcaccttct 770  Q
    | | ||||||| | | ||||||||||| |||| || ||||| ||||||| ||||  |||||||||| ||| |||||||||||||||||||||||||||||    
T  26658641 ttccaatacttctcaagtggtgtgttaatgtgaaatatctaaacttatcaaagaacaatttcaaaattctacccgagtgccttagtgaatgtcaccttct 26658740  T
Q  771 taa 773  Q
    |||    
T  26658741 taa 26658743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 75; E-Value: 7e-34
Query Start/End: Original strand, 176 - 773
Target Start/End: Original strand, 26764114 - 26764714
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||| |||||||  |||||||| |  ||||||||||| ||| ||||||||||||||| |||||| |||||||||| ||  |||||||||||||||| ||    
T  26764114 tgcaggagttcaataatatgaaattcatgacattggacgattgtgaatatttaacccatatacccaatgtctcaggtctctcaaatttagaaaagttctc 26764213  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagt 375  Q
     |||| |  ||||   ||||||||||||||||||||||||||||| | |||       ||||||||| ||||||||     |||||  ||| ||   |||    
T  26764214 atttcgaaattgtgctaatttaattacaattcacaattcagttggatacctaaataaacttgaaatcttagatgcatatggttgcagaaagatcgtaagt 26764313  T
Q  376 tttccacctttacaactaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattata 475  Q
    |||||||| ||||  || |||| |||| || ||||  |||||  |  |||| ||||||||||||  |||||||||||| |||||||||||  ||| ||||    
T  26764314 tttccacccttacggcttccctctcttaaggaatttcaactcagttggtgtaagagtctcaagaaatttccagaattactatgcaagatgtcaaa-tata 26764412  T
Q  476 a-agattttatgttgcacgaa--acttg-cataggagaattgccattttcatttcaaaatctcagtgaacttgatcgcttagaaataattggctgtcgaa 571  Q
    | |||  ||  |||    |||   |||| | ||| |||||| |||||| |||||||||||||||||||||||  |   ||||  ||||   | |||  ||    
T  26764413 agagaaattcagttaattgaatgtcttgacgtagaagaatttccatttccatttcaaaatctcagtgaacttagtgatttagtgataaacagatgtgaaa 26764512  T
Q  572 tgctcaggttcccaaaacataatgataaaatcaattttatggtattttcaaatgtgcaccatcttagaattgaa-aagagcaacctctcagatgaatttc 670  Q
    ||||||||||||||| |||  |||||||| |  |||| || || ||||||||||||||  ||  | ||  | || || ||||| ||||||||||| | ||    
T  26764513 tgctcaggttcccaagacacgatgataaattggatttcatagtgttttcaaatgtgca-aatgctcgatctcaataacagcaatctctcagatgactgtc 26764611  T
Q  671 tccaaatacttttgatgtggtgtgttagtgtggaaaatctatacttatctaagacaaatttcaaaactcttcccgagtgccttagtgaatgtcaccttct 770  Q
    | | ||||||| | | ||||||||||| |||| || ||||| ||||||| ||||  |||||||||| ||| |||||||||||||||||||||||||||||    
T  26764612 ttccaatacttctcaagtggtgtgttaatgtgaaatatctaaacttatcaaagaacaatttcaaaattctacccgagtgccttagtgaatgtcaccttct 26764711  T
Q  771 taa 773  Q
    |||    
T  26764712 taa 26764714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 75; E-Value: 7e-34
Query Start/End: Original strand, 357 - 835
Target Start/End: Original strand, 26961456 - 26961934
Alignment:
Q  357 ttgcatcaagctccagagttttccacctttacaactaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattatta 456  Q
    |||| |||||||| ||||||||||||| |||||  | |||| |||| || |||||||||||| ||||||||| |||||||| ||||||||||||||||||    
T  26961456 ttgcctcaagctcgagagttttccacccttacatttgccctctcttaaggaattggaactctctaagtgtgatagtctcaaaagttttccagaattatta 26961555  T
Q  457 tgcaagatgaaaaattataaagattttatgttgcacgaaacttgcataggagaattgccattttcatttcaaaatctcagtgaacttgatcgcttagaaa 556  Q
    ||| | |||| ||||   |||||  |||   |    || |||| |||||||||||| ||||||||||||||| |||||||||||||||    |||| ||     
T  26961556 tgccaaatgacaaatataaaagagattaatctttgtgatacttccataggagaatttccattttcatttcaatatctcagtgaacttgtgttcttacaag 26961655  T
Q  557 taattggctgtcgaatgctcaggttcccaaaacataatgataaaatcaattttatggtattttcaaatgtgcaccatcttagaattgaaaagagcaacct 656  Q
    ||| | |   | ||||||||||||||| |||  ||||||||| ||| |||  |||  | ||||||||  || |   | ||| | ||| | |||  |||||    
T  26961656 taaatcgagttagaatgctcaggttccaaaagtataatgatagaatgaatcctataatgttttcaaaaatgtattctgttatacttggagagacaaacct 26961755  T
Q  657 ctcagatgaatttctccaaatacttttgatgtggtgtgttagtgtggaaaatctatacttatctaagacaaatttcaaaactcttcccgagtgccttagt 756  Q
    ||||||||||| ||||| ||||||| | | || || ||||| ||||  |  |||| | |||   ||||  |||||||||| |||||||||||||||||||    
T  26961756 ctcagatgaatgtctcccaatacttctcaagttgtttgttaatgtgacatctctaaaattaatgaagaacaatttcaaaattcttcccgagtgccttagt 26961855  T
Q  757 gaatgtcaccttcttaaatgcattaatgtggatggctgcaagtttcttgaggaaattacagggtttccaccaaatcttg 835  Q
    |||||||||| ||||       ||    |||||| ||||||||||||||||||||||| |||| |||||||||||||||    
T  26961856 gaatgtcaccgtcttggggagcttgtgttggatgactgcaagtttcttgaggaaattagagggattccaccaaatcttg 26961934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 75; E-Value: 7e-34
Query Start/End: Original strand, 176 - 314
Target Start/End: Complemental strand, 27675576 - 27675438
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||||||||| |  |||||| | | |||| ||||||||||| |||||||||||| || ||||||||||||||||| ||| |||||||||||||||||||    
T  27675576 tgcagaagttccaggatatgacaatcttgatattggaccattgtgaatatttaacacatatacccgatgtctcaggcctttcaaatttagaaaagttatc 27675477  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattc 314  Q
    |||| ||| |||| | |||||||||||||||||||||||    
T  27675476 gtttgaatgttgttataatttaattacaattcacaattc 27675438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 191 - 314
Target Start/End: Complemental strand, 27609101 - 27608978
Alignment:
Q  191 atatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatcgtttcaattttgtaa 290  Q
    |||||||||| ||||||||| || ||| |||||||||||| || ||||||||||||||||| ||| |||||||||||||||||||||||  || |||| |    
T  27609101 atatgaaagtcttgacattgaactattgtgaatatttaacacatatacccgatgtctcaggcctttcaaatttagaaaagttatcgtttacatgttgtga 27609002  T
Q  291 gaatttaattacaattcacaattc 314  Q
     |||||||||||||||||||||||    
T  27609001 taatttaattacaattcacaattc 27608978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 191 - 314
Target Start/End: Complemental strand, 27704198 - 27704075
Alignment:
Q  191 atatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatcgtttcaattttgtaa 290  Q
    |||||| ||| |||||||||||||||| | |||||||||| || ||||||||||||||||| ||| ||||||||||||||||||||||| ||| |||| |    
T  27704198 atatgacagtcttgacattggaccattgtaaatatttaacacatatacccgatgtctcaggcctttcaaatttagaaaagttatcgtttgaatattgtga 27704099  T
Q  291 gaatttaattacaattcacaattc 314  Q
     ||||||||||| |||||||||||    
T  27704098 taatttaattacgattcacaattc 27704075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 71; E-Value: 2e-31
Query Start/End: Original strand, 176 - 907
Target Start/End: Original strand, 28794573 - 28795304
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||||||||| |  | |||||||| |||||||||||| | | ||||||||||||||| ||||| ||||||||||| |||| |||||| |||||||| ||    
T  28794573 tgcagaagttccagaacatgaaagtcttgacattggacaagtgtgaatatttaacccatatacctgatgtctcaggtcttcaaaatttggaaaagttctc 28794672  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagt 375  Q
    ||||  || ||||   || ||||||||||||||||||||| ||||   |||       |||||||   ||  ||||     ||||| ||||||| |  ||    
T  28794673 gtttgcatattgtcgtaaattaattacaattcacaattcaattggacacctaaataaacttgaaaggttaagtgcatatggttgcagcaagctcgaacgt 28794772  T
Q  376 tttccacctttacaactaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattata 475  Q
    ||||||||||||    |  | | |||| |  ||||||| |||| |   |||||||||||||||| ||||||| |||||||||||||||||| ||||   |    
T  28794773 tttccacctttagggttggcatctcttaacgaattggatctctctttttgtgagagtctcaagaattttccaaaattattatgcaagatgacaaatatca 28794872  T
Q  476 aagattttatgttgcacgaaacttgcataggagaattgccattttcatttcaaaatctcagtgaacttgatcgcttagaaataattggctgtcgaatgct 575  Q
    ||||  ||    |     | |||| ||||||||||||||||| ||||||||||||||||| ||||||||||   |||  | || | |  ||| ||||| |    
T  28794873 aagagattggtatatcttatacttccataggagaattgccatcttcatttcaaaatctcaatgaacttgatgagttatcagtagtggaatgtggaatgat 28794972  T
Q  576 caggttcccaaaacataatgataaaatcaattttatggtattttcaaatgtgcaccatcttagaattgaaaagagcaacctctcagatgaatttctccaa 675  Q
     |||||||||||||| |||||| ||||  ||| ||| || ||||||||| ||    | |||||  |     |  |||||||||||||||||| ||||| |    
T  28794973 gaggttcccaaaacagaatgatcaaatgtattctatagtgttttcaaatttgagaaagcttagtctcagcgactgcaacctctcagatgaatgtctccca 28795072  T
Q  676 atacttttgatgtggtgtgttagtgtggaaaatctatacttatctaagacaaatttcaaaactcttcccgagtgccttagtgaatgtcaccttcttaaat 775  Q
    ||| || | | ||||||||||| |||| ||   ||| |||||||   ||  |||||||||  | |||| |||||||||||||||||| ||||||||||      
T  28795073 atatttctcaagtggtgtgttaatgtgaaattgctagacttatcatggaacaatttcaaatttattcctgagtgccttagtgaatgttaccttcttaata 28795172  T
Q  776 gcattaatgtggatggctgcaagtttcttgaggaaattacagggtttccaccaaatcttgaaagatttcacgcagaggaatgttattcattgagttcctc 875  Q
     | |||   |||||  |||||||| ||| |||||||||| |||| |||||||||||||||||||  ||   |||  || |||  | ||||||||||||||    
T  28795173 accttagattggataactgcaagtctctcgaggaaattagagggattccaccaaatcttgaaaggctttctgcaatgggatgcaaatcattgagttcctc 28795272  T
Q  876 aagtagacgattgttattgagtcaggtttgtt 907  Q
    ||||||| || || ||||||||||||||||||    
T  28795273 aagtagaagaatgctattgagtcaggtttgtt 28795304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 69; E-Value: 3e-30
Query Start/End: Original strand, 501 - 916
Target Start/End: Complemental strand, 27675248 - 27674834
Alignment:
Q  501 cataggagaattgccattttcatttcaaaatctcagtgaacttgatcgcttagaaataattggctgtcgaatgctcaggttcccaaaacataatgataaa 600  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||   |||  | ||   |    | ||||||| |||||||||||||||||||||| |    
T  27675248 cataggagaattgccatcttcatttcaaaatctcagtgaacttgatgagttatcagtacgggaagctagaatgctgaggttcccaaaacataatgataga 27675149  T
Q  601 atcaattttatggtattttcaaatgtgcaccatcttagaattgaaaagagcaacctctcagatgaatttctccaaatacttttgatgtggtgtgttagtg 700  Q
    ||  ||| ||  || |||||||| |||    | ||||||||  |  || |||||||||||||||||| |||||||||| || | | ||||||||||| ||    
T  27675148 atgtattctaaagtgttttcaaaggtgacaaagcttagaatctacgagtgcaacctctcagatgaatatctccaaatagttcttaagtggtgtgttaatg 27675049  T
Q  701 tggaaaatctatacttatctaagacaaatttcaaaactcttcccgagtgccttagtgaatgtcaccttcttaaatgcattaatgtggatggctgcaagtt 800  Q
    |||||   ||| |||||||  | |  |||||||||| |||||| |||||||||||||||||||||| ||||||     ||  | || ||  ||||   |     
T  27675048 tggaattgctagacttatcacataacaatttcaaaattcttcctgagtgccttagtgaatgtcaccatcttaagcatcttggtttgcattactgctcttc 27674949  T
Q  801 tcttgaggaaattacagggtttccaccaaatcttgaa-agatttcacgcagaggaatgttattcattgagttcctcaagtagacgattgttattgagtca 899  Q
    |||||||||||||| |||| |||||||||||||| || || |||| |||| |  ||||| | ||||||||||||||| ||||| || ||||| |||||||    
T  27674948 tcttgaggaaattagagggattccaccaaatcttaaagagctttc-cgcatatcaatgtaaatcattgagttcctcatgtagaagaatgttaatgagtca 27674850  T
Q  900 ggtttgtttgttgtttt 916  Q
    |||| | ||||||||||    
T  27674849 ggttag-ttgttgtttt 27674834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 25485057 - 25485179
Alignment:
Q  17 agtttgagatattggaaatggaatggttgtcctttgaagtctctatcatcttgtattttgaataaggcaagtgaaataagttcagttttcaattgtgcat 116  Q
    ||||||||||||||||||||||   ||||||||||||||||||| ||   |||||||| ||  ||||||||||||||||||||| |||||||||||| ||    
T  25485057 agtttgagatattggaaatggataagttgtcctttgaagtctctttc---ttgtatttcgagcaaggcaagtgaaataagttcatttttcaattgtgtat 25485153  T
Q  117 atttataattcactattagataataa 142  Q
    ||| ||||||||||||||||| ||||    
T  25485154 attgataattcactattagattataa 25485179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 649 - 1144
Target Start/End: Original strand, 26638039 - 26638532
Alignment:
Q  649 agcaacctctcagatgaatttctccaaatacttttgatgtggtgtgttagtgtggaaaatctatacttatctaagacaaatttcaaaactcttcccgagt 748  Q
    |||||| | |||||||||| ||||| ||||||| | | |||||||| || |||| ||    |||||||||||   |  |||||||||| |||||| ||||    
T  26638039 agcaacttatcagatgaatgtctcccaatacttctcaagtggtgtgctaatgtgaaattgttatacttatctggtaacaatttcaaaattcttcctgagt 26638138  T
Q  749 gccttagtgaatgtcaccttcttaaatgcattaatgtggatggctgcaagtttcttgaggaaattacagggtttccaccaaatcttgaaagatttcac-g 847  Q
    ||||||||| ||||||||||||||    | ||||| ||||||  ||||||  |||||| ||||||| |||| |||||||||||| | ||  | ||  | |    
T  26638139 gccttagtgtatgtcaccttcttaggatccttaatttggatgaatgcaaggctcttgaagaaattagagggattccaccaaatc-taaattacttgtctg 26638237  T
Q  848 cagaggaatgttattcattgagttcctcaagtagacgattgttattgagtcaggtttgt--ttgttgttttatcgtgcagtaatatttgatggatagtat 945  Q
    ||  ||||||  ||||||||||||||||||||||| ||  | |||||||||||||||||  ||||||||||||| |||  || |||||| |  |||||||    
T  26638238 caatggaatgcgattcattgagttcctcaagtagaagaaggctattgagtcaggtttgttgttgttgttttatcttgccatagtatttgttatatagtat 26638337  T
Q  946 ttgatattgatatataatcgataa--tgtaatacatcttattctaaactaacaggagctacacgaggctggacacacggaattttattttccaaccggaa 1043  Q
          || ||||||| | |||||  ||||||| ||||||| |||||||||||| | ||||| || ||||||  ||| ||  ||  |||||||||| |||    
T  26638338 ------ttcatatatatttgataatgtgtaatatatcttatactaaactaacagaaactacatgaagctggatgcactgatattcgttttccaaccagaa 26638431  T
Q  1044 gtgaggggattccaaattggttcgagtatcaaatcagggtaaaccaaccaatttctttctcgtttcatgaaaagatcccttgtataacttgtattattct 1143  Q
      |||| ||||||| ||||||||||| |||||| ||||| | |     |||||||||||| ||||| | |||||||||||| ||| |||| |||| ||||    
T  26638432 cagaggagattccagattggttcgagcatcaaagcaggggacatggcacaatttctttctggtttcgtaaaaagatcccttctattacttctattcttct 26638531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 649 - 1144
Target Start/End: Original strand, 26744005 - 26744498
Alignment:
Q  649 agcaacctctcagatgaatttctccaaatacttttgatgtggtgtgttagtgtggaaaatctatacttatctaagacaaatttcaaaactcttcccgagt 748  Q
    |||||| | |||||||||| ||||| ||||||| | | |||||||| || |||| ||    |||||||||||   |  |||||||||| |||||| ||||    
T  26744005 agcaacttatcagatgaatgtctcccaatacttctcaagtggtgtgctaatgtgaaattgttatacttatctggtaacaatttcaaaattcttcctgagt 26744104  T
Q  749 gccttagtgaatgtcaccttcttaaatgcattaatgtggatggctgcaagtttcttgaggaaattacagggtttccaccaaatcttgaaagatttcac-g 847  Q
    ||||||||| ||||||||||||||    | ||||| ||||||  ||||||  |||||| ||||||| |||| |||||||||||| | ||  | ||  | |    
T  26744105 gccttagtgtatgtcaccttcttaggatccttaatttggatgaatgcaaggctcttgaagaaattagagggattccaccaaatc-taaattacttgtctg 26744203  T
Q  848 cagaggaatgttattcattgagttcctcaagtagacgattgttattgagtcaggtttgt--ttgttgttttatcgtgcagtaatatttgatggatagtat 945  Q
    ||  ||||||  ||||||||||||||||||||||| ||  | |||||||||||||||||  ||||||||||||| |||  || |||||| |  |||||||    
T  26744204 caatggaatgcgattcattgagttcctcaagtagaagaaggctattgagtcaggtttgttgttgttgttttatcttgccatagtatttgttatatagtat 26744303  T
Q  946 ttgatattgatatataatcgataa--tgtaatacatcttattctaaactaacaggagctacacgaggctggacacacggaattttattttccaaccggaa 1043  Q
          || ||||||| | |||||  ||||||| ||||||| |||||||||||| | ||||| || ||||||  ||| ||  ||  |||||||||| |||    
T  26744304 ------ttcatatatatttgataatgtgtaatatatcttatactaaactaacagaaactacatgaagctggatgcactgatattcgttttccaaccagaa 26744397  T
Q  1044 gtgaggggattccaaattggttcgagtatcaaatcagggtaaaccaaccaatttctttctcgtttcatgaaaagatcccttgtataacttgtattattct 1143  Q
      |||| ||||||| ||||||||||| |||||| ||||| | |     |||||||||||| ||||| | |||||||||||| ||| |||| |||| ||||    
T  26744398 cagaggagattccagattggttcgagcatcaaagcaggggacatggcacaatttctttctggtttcgtaaaaagatcccttctattacttctattcttct 26744497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 191 - 314
Target Start/End: Original strand, 26804695 - 26804818
Alignment:
Q  191 atatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatcgtttcaattttgtaa 290  Q
    |||||||||| |||||||||||| ||  ||||||||||||||| ||||| ||| ||||||| |||| ||||||||||||||| |||||| ||| |||| |    
T  26804695 atatgaaagtcttgacattggacgataatgaatatttaacccacatacctgatctctcaggtcttcaaaatttagaaaagttctcgtttaaatattgtga 26804794  T
Q  291 gaatttaattacaattcacaattc 314  Q
    |||||||||||||||| |||||||    
T  26804795 gaatttaattacaattgacaattc 26804818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 25512885 - 25513002
Alignment:
Q  17 agtttgagatattggaaatggaatggttgtcctttgaagtctctatcatcttgtattttgaataaggcaagtgaaataagttcagttttcaattgtgcat 116  Q
    |||||||||||||||||||||  || |||||||||| | ||||||||   |||||||||||  ||||||||||||||||||||| |||||||||||| ||    
T  25512885 agtttgagatattggaaatggtgtgtttgtcctttggaatctctatc---ttgtattttgagcaaggcaagtgaaataagttcatttttcaattgtgtat 25512981  T
Q  117 atttataattcactattagat 137  Q
    ||| |||||||||||||||||    
T  25512982 attgataattcactattagat 25513002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 25546976 - 25547093
Alignment:
Q  17 agtttgagatattggaaatggaatggttgtcctttgaagtctctatcatcttgtattttgaataaggcaagtgaaataagttcagttttcaattgtgcat 116  Q
    ||||||||||||||||||||||    |||||||||||||||||   |||||||||||| ||  ||||||||||||||||||||| |||||||||||| ||    
T  25546976 agtttgagatattggaaatggagattttgtcctttgaagtctc---catcttgtatttcgagcaaggcaagtgaaataagttcatttttcaattgtgtat 25547072  T
Q  117 atttataattcactattagat 137  Q
    ||| |||||||||||||||||    
T  25547073 attgataattcactattagat 25547093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 573 - 907
Target Start/End: Original strand, 25485551 - 25485885
Alignment:
Q  573 gctcaggttcccaaaacataatgataaaatcaattttatggtattttcaaatgtgcaccatcttagaattga-aaagagcaacctctcagatgaatttct 671  Q
    ||||||||||| |||| ||||||||||||| ||||  || || |||||||||||| | ||| || ||  | | ||| | ||||||||||||||||| |||    
T  25485551 gctcaggttccaaaaatataatgataaaatgaattcaatagtgttttcaaatgtggaacatgtt-gagctcagaaacaacaacctctcagatgaatgtct 25485649  T
Q  672 ccaaatacttttgatgtggtgtgttagtgtggaaaatctatacttatctaagacaaatttcaaaactcttcccgagtgccttagtgaatgtcaccttctt 771  Q
    || ||||||| | | ||||| ||||| ||||  |  |||| |||||||  |||  ||||||| || |||||||||||||||| |||||||||||| ||||    
T  25485650 cccaatacttctcaagtggtttgttaatgtgacatttctagacttatcgcagaacaatttcacaattcttcccgagtgccttggtgaatgtcaccgtctt 25485749  T
Q  772 aaatgcattaatgtggatggctgcaagtttcttgaggaaattacagggtttccaccaaatcttgaaagatttcacgcagaggaatgttattcattgagtt 871  Q
    ||     || || || |    ||||||  |||||||||||||| |||| |||||||||||||||||||  ||   ||| | || ||||||||||||| ||    
T  25485750 aagcatctttatttgaagaagtgcaaggctcttgaggaaattagagggattccaccaaatcttgaaaggctttttgcaaacgagtgttattcattgaatt 25485849  T
Q  872 cctcaagtagacgattgttattgagtcaggtttgtt 907  Q
    ||||||||| | || ||||| |||||||||||||||    
T  25485850 cctcaagtataagaatgttaatgagtcaggtttgtt 25485885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 26057915 - 26058037
Alignment:
Q  17 agtttgagatattggaaatggaatggttgtcctttgaagtctctatcatcttgtattttgaataaggcaagtgaaataagttcagttttcaattgtgcat 116  Q
    ||||||||||||||||||||||   || |||||||||||||||||||   |||||||| ||  ||||||||||||||| ||||| |||||||||||| ||    
T  26057915 agtttgagatattggaaatggataagtagtcctttgaagtctctatc---ttgtatttcgagcaaggcaagtgaaataggttcatttttcaattgtgtat 26058011  T
Q  117 atttataattcactattagataataa 142  Q
    ||| ||||||||||||||||| ||||    
T  26058012 attgataattcactattagattataa 26058037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 26077885 - 26078007
Alignment:
Q  17 agtttgagatattggaaatggaatggttgtcctttgaagtctctatcatcttgtattttgaataaggcaagtgaaataagttcagttttcaattgtgcat 116  Q
    ||||||||||||||||||||||   || |||||||||||||||||||   |||||||| ||  ||||||||||||||| ||||| |||||||||||| ||    
T  26077885 agtttgagatattggaaatggataagtagtcctttgaagtctctatc---ttgtatttcgagcaaggcaagtgaaataggttcatttttcaattgtgtat 26077981  T
Q  117 atttataattcactattagataataa 142  Q
    ||| ||||||||||||||||| ||||    
T  26077982 attgataattcactattagattataa 26078007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 176 - 314
Target Start/End: Original strand, 26637720 - 26637858
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||||||||||||||||||||||| ||||||||| |||||| | | |||||||| || ||||||||||||||||| ||  ||||||| |||||||| ||    
T  26637720 tgcagaagttcaactatatgaaagtcttgacattgaaccattgtcactatttaactcatatacccgatgtctcaggtctatcaaattttgaaaagttctc 26637819  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattc 314  Q
    |||| ||   ||||| |||| ||||||||||||| ||||    
T  26637820 gtttaaaaagtgtaaaaattgaattacaattcacgattc 26637858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 176 - 314
Target Start/End: Original strand, 26743686 - 26743824
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||||||||||||||||||||||| ||||||||| |||||| | | |||||||| || ||||||||||||||||| ||  ||||||| |||||||| ||    
T  26743686 tgcagaagttcaactatatgaaagtcttgacattgaaccattgtcactatttaactcatatacccgatgtctcaggtctatcaaattttgaaaagttctc 26743785  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattc 314  Q
    |||| ||   ||||| |||| ||||||||||||| ||||    
T  26743786 gtttaaaaagtgtaaaaattgaattacaattcacgattc 26743824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 176 - 314
Target Start/End: Complemental strand, 27716496 - 27716358
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||||||||| |  |||||||||| |||| ||||||||  | | |||||||||| || ||||||||||||||||| ||| |||||||||||||||||||    
T  27716496 tgcagaagttccaggatatgaaagtcttgatattggaccgatgtaaatatttaacacatatacccgatgtctcaggcctttcaaatttagaaaagttatc 27716397  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattc 314  Q
    |||| ||   ||| | |||||||||||||||||||||||    
T  27716396 gtttgaaagatgttataatttaattacaattcacaattc 27716358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 26144863 - 26144985
Alignment:
Q  17 agtttgagatattggaaatggaatggttgtcctttgaagtctctatcatcttgtattttgaataaggcaagtgaaataagttcagttttcaattgtgcat 116  Q
    ||||||||||||||||||||||     ||||||||||||||||||||   |||||||| ||  ||||||||||||||||||||| |||||||||||| ||    
T  26144863 agtttgagatattggaaatggatattctgtcctttgaagtctctatc---ttgtatttcgagcaaggcaagtgaaataagttcatttttcaattgtgtat 26144959  T
Q  117 atttataattcactattagataataa 142  Q
    ||| ||||||| ||||||||| ||||    
T  26144960 attgataattctctattagattataa 26144985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 26145017 - 26145112
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagt 271  Q
    ||||| ||||||||||||||||||| ||||||||| || |||||  |||||||||||| ||||||||||||||||| ||||||||| |||||||||    
T  26145017 tgcaggagttcaactatatgaaagtcttgacattgaactattctcgatatttaacccatatacccgatgtctcaggtcttccaaatctagaaaagt 26145112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 26657981 - 26658088
Alignment:
Q  17 agtttgagatattggaaatggaatggttgtcctttgaagtctctatcatcttgtattttgaataaggcaagtgaaataagttcagttttcaattgtgcat 116  Q
    |||||||||| || ||||||||| || ||||||| |||||||||||||||||||||||  || ||||||||||||||||||||| ||||| || ||| ||    
T  26657981 agtttgagatttttgaaatggaaaggatgtccttcgaagtctctatcatcttgtatttcaaacaaggcaagtgaaataagttcatttttcgatcgtgtat 26658080  T
Q  117 atttataa 124  Q
    ||||||||    
T  26658081 atttataa 26658088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 26763952 - 26764059
Alignment:
Q  17 agtttgagatattggaaatggaatggttgtcctttgaagtctctatcatcttgtattttgaataaggcaagtgaaataagttcagttttcaattgtgcat 116  Q
    |||||||||| || ||||||||| || ||||||| |||||||||||||||||||||||  || ||||||||||||||||||||| ||||| || ||| ||    
T  26763952 agtttgagatttttgaaatggaaaggatgtccttcgaagtctctatcatcttgtatttcaaacaaggcaagtgaaataagttcatttttcgatcgtgtat 26764051  T
Q  117 atttataa 124  Q
    ||||||||    
T  26764052 atttataa 26764059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 223 - 543
Target Start/End: Complemental strand, 27663165 - 27662845
Alignment:
Q  223 tatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatcgtttcaattttgtaagaatttaattacaattcacaattcagttgggt 322  Q
    |||||||| || ||||| ||||| ||||| |||||| | |||  || | | || ||||||  |||||| ||||||| |||||||||||||||||||||||    
T  27663165 tatttaactcatatacctgatgtttcaggtcttccagaattaataaggctctcatttcaaaattgtaaaaatttaactacaattcacaattcagttgggt 27663066  T
Q  323 tcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagttttccacctttacaactaccctgtcttgagaaattggaactctataa 422  Q
     |||       ||||||||| |||||||   | | ||||  |||||| ||||||||||||| |||   || || | |||| |||||||||||||| ||      
T  27663065 acctttataaacttgaaatcttagatgcgaccatgtgcaggaagctcaagagttttccacccttatgtctgccgtctcttaagaaattggaactccattt 27662966  T
Q  423 gtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattataaagattttatgttgcacgaaacttgcataggagaattgccattttca 522  Q
     |||  |||||||||||||||||||||||||||||||||||||  ||||   |||||  ||  |||    || |||| ||||| |||| |||||||||||    
T  27662965 ttgtaggagtctcaagagttttccagaattattatgcaagatgtcaaatataaaagagatttggttatgtgatacttccatagaagaaatgccattttca 27662866  T
Q  523 tttcaaaatctcagtgaactt 543  Q
    ||| ||||||||| |||||||    
T  27662865 tttaaaaatctcaatgaactt 27662845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 26058077 - 26058166
Alignment:
Q  182 agttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagt 271  Q
    |||||||||||||||||||  |||||||||||  |||| ||||||||||||| ||||||||||||||||| ||||||||| |||||||||    
T  26058077 agttcaactatatgaaagttatgacattggacggttctcaatatttaacccatatacccgatgtctcaggtcttccaaatctagaaaagt 26058166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 26078047 - 26078136
Alignment:
Q  182 agttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagt 271  Q
    |||||||||||||||||||  |||||||||||  |||| ||||||||||||| ||||||||||||||||| ||||||||| |||||||||    
T  26078047 agttcaactatatgaaagttatgacattggacggttctcaatatttaacccatatacccgatgtctcaggtcttccaaatctagaaaagt 26078136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 25485211 - 25485306
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagt 271  Q
    ||||| ||||||||||||||||||| |||||||||||   || ||||||||||||||| |||||||||||||| || ||||||||| |||||||||    
T  25485211 tgcaggagttcaactatatgaaagtcttgacattggatttttgtgaatatttaacccatatacccgatgtctcgggtcttccaaatctagaaaagt 25485306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 193 - 320
Target Start/End: Original strand, 28788469 - 28788596
Alignment:
Q  193 atgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatcgtttcaattttgtaaga 292  Q
    |||||||| |||||||||||| | | ||||||||||||||| ||||| ||||||||||| |||| |||||| |||||||| ||||||  || ||||   |    
T  28788469 atgaaagtcttgacattggacaagtgtgaatatttaacccatatacctgatgtctcaggtcttcaaaatttggaaaagttctcgtttgcatattgtcgta 28788568  T
Q  293 atttaattacaattcacaattcagttgg 320  Q
    | ||||||||||||||||||||| ||||    
T  28788569 aattaattacaattcacaattcaattgg 28788596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 424 - 907
Target Start/End: Original strand, 28788797 - 28789280
Alignment:
Q  424 tgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattataaagattttatgttgcacgaaacttgcataggagaattgccattttcat 523  Q
    |||| ||||||||||||||||||| |||||||||||||||||| ||||  |||| |  ||  ||||||  | |||| |||| |||||||||||| |||||    
T  28788797 tgtgggagtctcaagagttttccaaaattattatgcaagatgacaaatattaaaaagatttggttgcagaatacttccataagagaattgccatcttcat 28788896  T
Q  524 ttcaaaatctcagtgaacttgatcgcttagaaataattggctgtcgaatgctcaggttcccaaaacataatgataaaatcaattttatggtattttcaaa 623  Q
    |||||||||||||||||||| ||   |||  | ||   |    | ||||||| |||||||||||||| |||||| ||||  ||| ||| || ||||||||    
T  28788897 ttcaaaatctcagtgaacttcatgagttaacagtacgggaagctggaatgctgaggttcccaaaacagaatgatcaaatgtattctatagtgttttcaaa 28788996  T
Q  624 tgtgcaccatcttagaattgaaaagagcaacctctcagatgaatttctccaaatacttttgatgtggtgtgttagtgtggaaaatctatacttatctaag 723  Q
     |||    |||||    |  | ||  |||| ||||||||||||| ||||| |||| || | | ||||||||||  ||||  | ||||| |||||||   |    
T  28788997 agtgacaaatcttgttctcaataattgcaagctctcagatgaatgtctcccaatatttctcaagtggtgtgtttatgtgacatatctagacttatcatgg 28789096  T
Q  724 acaaatttcaaaactcttcccgagtgccttagtgaatgtcaccttcttaaatgcattaatgtggatggctgcaagtttcttgaggaaattacagggtttc 823  Q
    |  |||||||||  | |||| |||||||||||||||||| ||||||||    || |||   |||||  |||||||| ||| |||||||||| |||| |||    
T  28789097 aacaatttcaaacttattcctgagtgccttagtgaatgttaccttctttctagccttagattggataactgcaagtctctggaggaaattagagggattc 28789196  T
Q  824 caccaaatcttgaaagatttcacgcagaggaatgttattcattgagttcctcaagtagacgattgttattgagtcaggtttgtt 907  Q
    |||||||||||| |||  ||   |||   | |||  | |||||||||||||||||||||  | || ||||||||||||||||||    
T  28789197 caccaaatcttgcaaggctttctgcaatcggatgcaaatcattgagttcctcaagtagaaaaatgctattgagtcaggtttgtt 28789280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 726 - 1154
Target Start/End: Complemental strand, 27662821 - 27662397
Alignment:
Q  726 aaatttcaaaactcttcccgagtgccttagtgaatgtcaccttcttaaatgcattaatgtggatggctgcaagtttcttgaggaaattacagggtttcca 825  Q
    ||||||||||| ||||||| ||||||||||||||||||||  |||| |     || || |||||  |||  ||| |||||||||||||| |||| |||||    
T  27662821 aaatttcaaaattcttcccaagtgccttagtgaatgtcactatcttgagcatctttatttggattactgtgagtctcttgaggaaattagagggattcca 27662722  T
Q  826 ccaaatcttgaaagatttcacgcagaggaatgttattcattgagttcctcaagtagacgattgttattgagtcaggtttgtttgttgttttatcgtgcag 925  Q
    || |||||   ||   || | ||||| | |||| | ||||||||||||||||||||| || |||||||||||||||||||||| || ||||||| ||||     
T  27662721 cccaatctaacaaatctttatgcagaaggatgtaaatcattgagttcctcaagtagaagaatgttattgagtcaggtttgttt-ttattttatcttgcac 27662623  T
Q  926 taatatttgatggatagtatttgatattgatatataatcgataatgtaatac---atcttattctaaactaacaggagctacacgaggctggacacacgg 1022  Q
    |  ||||||||   |||||||| ||||      || ||| | | || |||||   ||||||| |||| |||||||   || ||||| |||||   ||       
T  27662622 tggtatttgatatttagtatttcatat------attatccacactgaaatactgtatcttatgctaatctaacagcgactgcacgatgctggttgcaac- 27662530  T
Q  1023 aattttatttt-ccaaccggaagtgaggggattccaaattggttcgagtatcaaatcagggtaaaccaaccaatttctttctcgtttcatgaaaagatcc 1121  Q
    ||| || |||| ||||||||||  |||||||||||| ||||||||||| ||||| |||||| | || |  |||||||||||| |||   | |||||||||    
T  27662529 aatattgttttgccaaccggaacagaggggattccagattggttcgagcatcaagtcaggggacacaactcaatttctttctggttatgtaaaaagatcc 27662430  T
Q  1122 cttgtataacttgtattattcttaatccagaat 1154  Q
    ||| |||||||||||||||||||| ||| ||||    
T  27662429 cttctataacttgtattattcttattccggaat 27662397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 424 - 546
Target Start/End: Complemental strand, 27703965 - 27703843
Alignment:
Q  424 tgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattataaagattttatg-ttgcacgaaacttgcataggagaattgccattttca 522  Q
    |||||||||||| | |||||||||||||||||||||||||||| |||| ||| | | | | || |||||  | ||||  ||||||||| |||||||||||    
T  27703965 tgtgagagtctcgatagttttccagaattattatgcaagatgacaaat-atagataatatttggttgcagcatacttctataggagaactgccattttca 27703867  T
Q  523 tttcaaaatctcagtgaacttgat 546  Q
    ||||||||||||||||||||||||    
T  27703866 tttcaaaatctcagtgaacttgat 27703843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 176 - 306
Target Start/End: Original strand, 26625434 - 26625564
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||||||||| |  ||||||||||||| ||||||||| | | |||| ||||||| || ||||||||| ||||||| ||| |||||||| |||||||  |    
T  26625434 tgcagaagttccagaatatgaaagtattaacattggacgaatgtgaacatttaacacatatacccgatatctcaggcctttcaaatttacaaaagttgac 26625533  T
Q  276 gtttcaattttgtaagaatttaattacaatt 306  Q
     ||| | |||||||| |||||||||||||||    
T  26625534 atttaatttttgtaaaaatttaattacaatt 26625564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 176 - 306
Target Start/End: Original strand, 26731411 - 26731541
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||||||||| |  ||||||||||||| ||||||||| | | |||| ||||||| || ||||||||| ||||||| ||| |||||||| |||||||  |    
T  26731411 tgcagaagttccagaatatgaaagtattaacattggacgaatgtgaacatttaacacatatacccgatatctcaggcctttcaaatttacaaaagttgac 26731510  T
Q  276 gtttcaattttgtaagaatttaattacaatt 306  Q
     ||| | |||||||| |||||||||||||||    
T  26731511 atttaatttttgtaaaaatttaattacaatt 26731541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 26825864 - 26825946
Alignment:
Q  56 tctctatcatcttgtattttgaataaggcaagtgaaataagttcagttttcaattgtgcatatttat-aattcactattagat 137  Q
    |||||||||||| |||||||||| ||||||||||||||||||||| ||| |||||||| |||||||| ||||||||| |||||    
T  26825864 tctctatcatctagtattttgaacaaggcaagtgaaataagttcattttccaattgtgtatatttataaattcactactagat 26825946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 25581762 - 25581839
Alignment:
Q  65 tcttgtattttgaataaggcaagtgaaataagttcagttttcaattgtgcatatttataattcactattagataataa 142  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||||| ||||| |||||||| |||||||| ||||    
T  25581762 tcttgtattttgagcaaggcaagtgaaataagttcatttttcaattgtgtatattgataattcattattagattataa 25581839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 731 - 1133
Target Start/End: Original strand, 26625851 - 26626246
Alignment:
Q  731 tcaaaactcttcccgagtgccttagtgaatgtcaccttcttaaatgcattaatgtggatggctgcaagtttcttgaggaaattacagggtttccaccaaa 830  Q
    |||||| |||||| || ||||||| |||||||||||||||||    | ||||| | ||||||||| ||| |||||||||||||| |||| ||||||||||    
T  26625851 tcaaaattcttcctgaatgccttaatgaatgtcaccttcttaggatccttaatttagatggctgcgagtctcttgaggaaattagagggattccaccaaa 26625950  T
Q  831 tcttgaaagatttcac-gcagaggaatgttattcattgagttcctcaagtagacgattgttattgagtcaggtttgtttgttgttttatcgtgcagtaat 929  Q
    || | ||  | ||  | |||  |||||| |  |||||||||||||||| |||| || ||||||| ||||||||||| |||| ||||| || |||| || |    
T  26625951 tc-taaattacttgtctgcaacggaatgcttatcattgagttcctcaactagaagaatgttattaagtcaggtttg-ttgtggttttttcttgcaatagt 26626048  T
Q  930 atttgatggatagtatttgatattgatatataatcgataatgtaatacatcttattctaaactaacaggagctacacgaggctggacacacggaatttta 1029  Q
    ||   |   |||||||      || ||||||||| |||||||||||| || ||||||||||| ||||| |  |||| |||||||||  |||  ||| ||     
T  26626049 ataaaacacatagtat------tttatatataattgataatgtaatatattttattctaaacaaacagaaagtacatgaggctggatgcac-caatattc 26626141  T
Q  1030 ttttcca-accggaagtgaggggattccaaattggttcgagtatcaaatcagggtaaaccaaccaatttctttctcgtttcatgaaaagatcccttgtat 1128  Q
     |||||| | ||  |  |||||||||||| ||||||||||| |||||||||||| | || |  |||||||||||| ||||| | |||||||||||| |||    
T  26626142 gtttccataacgccaaagaggggattccagattggttcgagcatcaaatcaggggacacaacacaatttctttctggtttcgtaaaaagatcccttctat 26626241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 731 - 1133
Target Start/End: Original strand, 26731828 - 26732223
Alignment:
Q  731 tcaaaactcttcccgagtgccttagtgaatgtcaccttcttaaatgcattaatgtggatggctgcaagtttcttgaggaaattacagggtttccaccaaa 830  Q
    |||||| |||||| || ||||||| |||||||||||||||||    | ||||| | ||||||||| ||| |||||||||||||| |||| ||||||||||    
T  26731828 tcaaaattcttcctgaatgccttaatgaatgtcaccttcttaggatccttaatttagatggctgcgagtctcttgaggaaattagagggattccaccaaa 26731927  T
Q  831 tcttgaaagatttcac-gcagaggaatgttattcattgagttcctcaagtagacgattgttattgagtcaggtttgtttgttgttttatcgtgcagtaat 929  Q
    || | ||  | ||  | |||  |||||| |  |||||||||||||||| |||| || ||||||| ||||||||||| |||| ||||| || |||| || |    
T  26731928 tc-taaattacttgtctgcaacggaatgcttatcattgagttcctcaactagaagaatgttattaagtcaggtttg-ttgtggttttttcttgcaatagt 26732025  T
Q  930 atttgatggatagtatttgatattgatatataatcgataatgtaatacatcttattctaaactaacaggagctacacgaggctggacacacggaatttta 1029  Q
    ||   |   |||||||      || ||||||||| |||||||||||| || ||||||||||| ||||| |  |||| |||||||||  |||  ||| ||     
T  26732026 ataaaacacatagtat------tttatatataattgataatgtaatatattttattctaaacaaacagaaagtacatgaggctggatgcac-caatattc 26732118  T
Q  1030 ttttcca-accggaagtgaggggattccaaattggttcgagtatcaaatcagggtaaaccaaccaatttctttctcgtttcatgaaaagatcccttgtat 1128  Q
     |||||| | ||  |  |||||||||||| ||||||||||| |||||||||||| | || |  |||||||||||| ||||| | |||||||||||| |||    
T  26732119 gtttccataacgccaaagaggggattccagattggttcgagcatcaaatcaggggacacaacacaatttctttctggtttcgtaaaaagatcccttctat 26732218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 650 - 916
Target Start/End: Original strand, 26805139 - 26805404
Alignment:
Q  650 gcaacctctcagatgaatttctccaaatacttttgatgtggtgtgttagtgtggaaaatctatacttatctaagacaaatttcaaaactcttcccgagtg 749  Q
    ||||||||||||||||||  ||||||||| || | | ||||||||||| ||| ||| | ||| | ||||| || |  |||||||||| |||||| |||||    
T  26805139 gcaacctctcagatgaatacctccaaatagttcttaagtggtgtgttaatgttgaagaactagagttatcaaacaacaatttcaaaattcttcctgagtg 26805238  T
Q  750 ccttagtgaatgtcaccttcttaaatgcattaatgtggatggctgcaagtttcttgaggaaattacagggtttccaccaaatcttgaa-agatttcacgc 848  Q
     |||||||||||||||| ||||||     || || ||  |  |||||  | |||||||||||||| |||| ||||||| |||||  || || ||||  ||    
T  26805239 tcttagtgaatgtcaccatcttaagcatcttgatttgtcttactgcacatctcttgaggaaattagagggattccaccgaatctaaaagagctttc-tgc 26805337  T
Q  849 agaggaatgttattcattgagttcctcaagtagacgattgttattgagtcaggtttgtttgttgtttt 916  Q
    ||| | |||| | ||||||||||| ||||||||| || ||||| ||||||||||||| ||||||||||    
T  26805338 agaaggatgtaaatcattgagttcatcaagtagaagaatgttaatgagtcaggtttg-ttgttgtttt 26805404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 176 - 543
Target Start/End: Original strand, 26825987 - 26826354
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||||||||| |  |||||||||| ||  |||||||| | | | || |||||||||| ||||||||||||||| | |||||||  |||||||| || ||    
T  26825987 tgcagaagttcgagaatatgaaagtcttttcattggacaagtgtcaacatttaacccacatacccgatgtctcatgtcttccaatattagaaaaattctc 26826086  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagt 375  Q
     ||| ||   |||   ||||||||||||||| |||  ||  |||||| |||       ||||||||| || ||||||    ||||| ||||||| |||||    
T  26826087 atttaaaaaatgtcgtaatttaattacaattgacatctcgattgggtacctagataaacttgaaatcttaaatgcagagaattgcagcaagctcgagagt 26826186  T
Q  376 tttccacctttacaactaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatga-aaaattat 474  Q
    |||||||| ||||   | ||||  ||| || | ||| |||||| |   ||| |||||||||||||||||||| ||||||||||  |||||| |||| ||     
T  26826187 tttccacccttacggttgccctcccttaaggatttgaaactctctggctgtaagagtctcaagagttttccaaaattattatgtgagatgacaaaaataa 26826286  T
Q  475 aaagattttatgttgcacgaaacttgcataggagaattgccattttcatttcaaaatctcagtgaactt 543  Q
    || || ||| | ||| | || |||| ||||||||||||||||| |||||||| |||||||| |||||||    
T  26826287 aaggaatttgt-ttgtatgatacttccataggagaattgccatcttcatttcgaaatctcaatgaactt 26826354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 727 - 1145
Target Start/End: Original strand, 26952333 - 26952731
Alignment:
Q  727 aatttcaaaactcttcccgagtgccttagtgaatgtcaccttcttaaatgca-ttaatgtggatggctgcaagtttcttgaggaaattacagggtttcca 825  Q
    |||||||||| |||||||||||||||||||||||| |||| ||||   || | |||  |||||||||||| | |  ||||||||||| | |||| |||||    
T  26952333 aatttcaaaattcttcccgagtgccttagtgaatgccaccatctt-gttgaagttatcgtggatggctgctattcccttgaggaaatcagagggattcca 26952431  T
Q  826 ccaaatcttgaaagatttcacgcagaggaatgttattcattgagttcctcaagtagacgattgttattgagtcaggtttgtttgttgttttatcgtgcag 925  Q
    || ||||| |||||| ||   ||||  || ||  | || ||||||||| |||||||| || || |||||||||||||||| ||||||||||||| |||      
T  26952432 ccgaatctagaaagactttctgcagtagattgcgagtcgttgagttccgcaagtagaagaatgctattgagtcaggtttg-ttgttgttttatcttgc-- 26952528  T
Q  926 taatatttgatggatagtatttgatattgatatataatcgataatgtaatacatcttattctaaactaacaggagctacacgaggctggacacacggaat 1025  Q
     |||||       |||||||      ||||||||||||||||||| ||| | ||||||||||||||| |||| | ||| || ||||||||  |||  |      
T  26952529 -aatat-------atagtat------ttgatatataatcgataatttaacatatcttattctaaacttacagaaactaaacaaggctggatgcacctata 26952614  T
Q  1026 tttattttccaaccggaagtgaggggattccaaattggttcgagtatcaaatcagggtaaaccaaccaatttctttctcgtttcatgaaaagatcccttg 1125  Q
    || |||| |||| |  ||  |||||||||||| ||||||| ||| | |||| ||||| | ||    |||||||||||| ||||| |  |||||||||||     
T  26952615 ttcatttcccaaacaaaacagaggggattccagattggtttgagcaccaaaccaggggagac---acaatttctttctggtttcgtagaaagatcccttc 26952711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 32 - 132
Target Start/End: Original strand, 26863618 - 26863719
Alignment:
Q  32 aaatggaatggttgtcctttgaagtctctatcatcttgtattttgaataaggcaagtgaaataagttcagttttcaattgtgcatatttat-aattcact 130  Q
    |||||||| || | |||||  |||||||||||||||||| ||||||| ||||||||||| |||| |||| ||| |||||||| |||||||| ||||||||    
T  26863618 aaatggaaaggatatccttccaagtctctatcatcttgttttttgaacaaggcaagtgatataatttcattttccaattgtgtatatttataaattcact 26863717  T
Q  131 at 132  Q
    ||    
T  26863718 at 26863719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 429 - 543
Target Start/End: Complemental strand, 27716243 - 27716129
Alignment:
Q  429 gagtctcaagagttttccagaattattatgcaagatgaaaaattata-aagattttatgttgcacgaaacttgcataggagaattgccattttcatttca 527  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||| |  || ||  ||||    | |||| |||||||||| ||||||||||||||||    
T  27716243 gagtctcaagagttttccagaattattatgcaagatgacaaa-tatagacaatatttggttgtgtaatacttccataggagaactgccattttcatttca 27716145  T
Q  528 aaatctcagtgaactt 543  Q
    |||||| |||||||||    
T  27716144 aaatcttagtgaactt 27716129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 862 - 936
Target Start/End: Original strand, 26851360 - 26851433
Alignment:
Q  862 tcattgagttcctcaagtagacgattgttattgagtcaggtttgtttgttgttttatcgtgcagtaatatttgat 936  Q
    ||||||||||||||||| ||| || ||||||||||||||||||| || |||||||||| ||||||| ||||||||    
T  26851360 tcattgagttcctcaagcagaagaatgttattgagtcaggtttg-ttattgttttatcttgcagtagtatttgat 26851433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 961 - 1015
Target Start/End: Original strand, 28795338 - 28795392
Alignment:
Q  961 aatcgataatgtaatacatcttattctaaactaacaggagctacacgaggctgga 1015  Q
    |||||||||||||||| |||||||||||||||||||| ||||||| |||||||||    
T  28795338 aatcgataatgtaatatatcttattctaaactaacagaagctacatgaggctgga 28795392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 650 - 771
Target Start/End: Complemental strand, 27608645 - 27608524
Alignment:
Q  650 gcaacctctcagatgaatttctccaaatacttttgatgtggtgtgttagtgtggaaaatctatacttatctaagacaaatttcaaaactcttcccgagtg 749  Q
    |||||||||||||||||| ||||| ||||||| | | ||||| ||||| ||||  |  |||| |||||||  | |  |||||||||| |||||| |||||    
T  27608645 gcaacctctcagatgaatgtctcccaatacttctcaagtggtttgttaatgtgacatgtctagacttatcatatagcaatttcaaaattcttcctgagtg 27608546  T
Q  750 ccttagtgaatgtcaccttctt 771  Q
    ||||||||||||||||| ||||    
T  27608545 ccttagtgaatgtcaccatctt 27608524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 658 - 773
Target Start/End: Original strand, 25076539 - 25076654
Alignment:
Q  658 tcagatgaatttctccaaatacttttgatgtggtgtgttagtgtggaaaatctatacttatctaagacaaatttcaaaactcttcccgagtgccttagtg 757  Q
    |||||||||| ||| | ||||||| | | ||||| ||||| |||| || ||||| |||| ||||| |   ||||||||| ||||||||||||||||||||    
T  25076539 tcagatgaatgtcttccaatacttctcaagtggtttgttaatgtgaaatatctagacttgtctaacaatgatttcaaaattcttcccgagtgccttagtg 25076638  T
Q  758 aatgtcaccttcttaa 773  Q
    |||||| || ||||||    
T  25076639 aatgtcgccatcttaa 25076654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 430 - 546
Target Start/End: Complemental strand, 27590725 - 27590609
Alignment:
Q  430 agtctcaagagttttccagaattattatgcaagatgaaaaat-tata-aagattttatgttgcacgaaacttgcataggagaattgccattttcatttca 527  Q
    |||||||| ||||||||| |||||||||||||||||| |||| || | |||||||  | |||    | |||| |||| |||||||||||| |||||||||    
T  27590725 agtctcaaaagttttccaaaattattatgcaagatgacaaatatagacaagatttggttttggt--atacttccatacgagaattgccatcttcatttca 27590628  T
Q  528 aaatctcagtgaacttgat 546  Q
    |||||||||||||||||||    
T  27590627 aaatctcagtgaacttgat 27590609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 496 - 543
Target Start/End: Original strand, 27681468 - 27681515
Alignment:
Q  496 acttgcataggagaattgccattttcatttcaaaatctcagtgaactt 543  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||    
T  27681468 acttccataggagaactgccattttcatttcaaaatctcagtgaactt 27681515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 429 - 471
Target Start/End: Complemental strand, 27675323 - 27675281
Alignment:
Q  429 gagtctcaagagttttccagaattattatgcaagatgaaaaat 471  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  27675323 gagtctcaagagttttccagaattattatgcaagatgacaaat 27675281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 987 - 1153
Target Start/End: Original strand, 31287555 - 31287721
Alignment:
Q  987 taaactaacaggagctacacgaggctggacacacggaattttattttccaaccggaagtgaggggattccaaattggttcgagtatcaaatcagggtaaa 1086  Q
    ||||||||||| | ||||| |||||||||  ||| ||||||||||| ||||  ||||  || ||||||||||||||||| ||| | |||||||||| | |    
T  31287555 taaactaacagaaactacatgaggctggaggcactgaattttatttcccaaatggaacagatgggattccaaattggtttgagcaccaaatcaggggaca 31287654  T
Q  1087 ccaaccaatttctttctcgtttcatgaaaagatcccttgtataacttgtattattcttaatccagaa 1153  Q
         ||||| |||||| ||||| | |||||||||||| ||| |||| |||| |||||  |||||||    
T  31287655 aagcacaattactttctggtttcgtaaaaagatcccttctattacttatattcttctttctccagaa 31287721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 862 - 907
Target Start/End: Complemental strand, 25491454 - 25491409
Alignment:
Q  862 tcattgagttcctcaagtagacgattgttattgagtcaggtttgtt 907  Q
    ||||||||||||||||||||| || |||||||||||||||||||||    
T  25491454 tcattgagttcctcaagtagaagaatgttattgagtcaggtttgtt 25491409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 651 - 918
Target Start/End: Original strand, 27681596 - 27681862
Alignment:
Q  651 caacctctcagatgaatttctccaaatacttttgatgtggtgtgttagtgtggaaaatctatacttatctaagacaaatttcaaaactcttcccgagtgc 750  Q
    ||||||||||||||||| ||||| |||| || | | ||||||||||| | ||  | ||||| |||||||    |  |||||||||| |||||| ||||||    
T  27681596 caacctctcagatgaatgtctcccaatagttctcaagtggtgtgttaatatgacacatctagacttatcatttagcaatttcaaaattcttcctgagtgc 27681695  T
Q  751 cttagtgaatgtcaccttcttaaatgcattaatgtggatg-gctgcaagtttcttgaggaaattacagggtttccaccaaatcttgaa-agatttcacgc 848  Q
    ||| |||||||||||| ||||      ||||||||| ||| ||||| ||| |||||||||||||| |||| |||||||||||||  || || |||         
T  27681696 cttcgtgaatgtcaccatcttgttgaaattaatgtg-atgtgctgcgagtctcttgaggaaattagagggattccaccaaatctaaaagagctttgtgct 27681794  T
Q  849 agaggaatgttattcattgagttcctcaagtagacgattgttattgagtcaggtttgtttgttgttttat 918  Q
    |||  | ||| | ||||||||||||||||||||| || ||||| ||||||||||| | ||||||||||||    
T  27681795 agat-attgtaaatcattgagttcctcaagtagaagaatgttaatgagtcaggttag-ttgttgttttat 27681862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 501 - 546
Target Start/End: Complemental strand, 27696262 - 27696217
Alignment:
Q  501 cataggagaattgccattttcatttcaaaatctcagtgaacttgat 546  Q
    ||||||| || |||||||||||||||||||||||||||||||||||    
T  27696262 cataggaaaactgccattttcatttcaaaatctcagtgaacttgat 27696217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 978 - 1082
Target Start/End: Complemental strand, 25491347 - 25491243
Alignment:
Q  978 atcttattctaaactaacaggagctacacgaggctggacacacggaattttattttccaaccggaagtgaggggattccaaattggttcgagtatcaaat 1077  Q
    |||||||||||||||||||| | |||||||||||||||  ||| ||  ||| ||| |||| |  ||||||||| |||||| ||||||||||| | |||||    
T  25491347 atcttattctaaactaacagcaactacacgaggctggatgcaccgagatttgtttgccaaacacaagtgagggaattccagattggttcgagcaccaaat 25491248  T
Q  1078 caggg 1082  Q
     ||||    
T  25491247 taggg 25491243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 424 - 543
Target Start/End: Complemental strand, 27608868 - 27608749
Alignment:
Q  424 tgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattataaagatt-ttatgttgcacgaaacttgcataggagaattgccattttca 522  Q
    |||||||||||| | |||||||||||||||||||||||||||| |||  ||| | | | || |||||      |||| |||| ||||| |||||||||||    
T  27608868 tgtgagagtctcgatagttttccagaattattatgcaagatgacaaag-atagacaatattttgttgattagtacttccataagagaactgccattttca 27608770  T
Q  523 tttcaaaatctcagtgaactt 543  Q
    |||||||||||||||||||||    
T  27608769 tttcaaaatctcagtgaactt 27608749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 727 - 918
Target Start/End: Complemental strand, 27715948 - 27715758
Alignment:
Q  727 aatttcaaaactcttcccgagtgccttagtgaatgtcaccttcttaaatgcattaatgtggatggctgcaagtttcttgaggaaattacagggtttccac 826  Q
    |||||||||| |||||| |||||||||||||||||||||| ||||      ||||||||||    |||| |||  ||||||||||||| |||| ||||||    
T  27715948 aatttcaaaattcttcctgagtgccttagtgaatgtcaccatcttgttgaaattaatgtggggtactgcgagtcccttgaggaaattagagggattccac 27715849  T
Q  827 caaatcttgaaaga-tttcacgcagaggaatgttattcattgagttcctcaagtagacgattgttattgagtcaggtttgtttgttgttttat 918  Q
    |||||| | |||||  || | ||| | | |||| | ||||||||||||||||||| | || | ||| ||||||||||| | ||||||||||||    
T  27715848 caaatc-taaaagagattaatgcacaaggatgtcaatcattgagttcctcaagtaaaagaatattaatgagtcaggttag-ttgttgttttat 27715758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 856 - 907
Target Start/End: Original strand, 25582551 - 25582602
Alignment:
Q  856 tgttattcattgagttcctcaagtagacgattgttattgagtcaggtttgtt 907  Q
    ||||||||||||||||||||||||| | || ||||| |||||||||||||||    
T  25582551 tgttattcattgagttcctcaagtataagaatgttaatgagtcaggtttgtt 25582602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 856 - 907
Target Start/End: Original strand, 26058763 - 26058814
Alignment:
Q  856 tgttattcattgagttcctcaagtagacgattgttattgagtcaggtttgtt 907  Q
    ||||||||||||||||||||||||| | || ||||| |||||||||||||||    
T  26058763 tgttattcattgagttcctcaagtataagaatgttaatgagtcaggtttgtt 26058814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 856 - 907
Target Start/End: Original strand, 26078733 - 26078784
Alignment:
Q  856 tgttattcattgagttcctcaagtagacgattgttattgagtcaggtttgtt 907  Q
    ||||||||||||||||||||||||| | || ||||| |||||||||||||||    
T  26078733 tgttattcattgagttcctcaagtataagaatgttaatgagtcaggtttgtt 26078784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 727 - 833
Target Start/End: Original strand, 26851225 - 26851331
Alignment:
Q  727 aatttcaaaactcttcccgagtgccttagtgaatgtcaccttctta-aatgcattaatgtggatggctgcaagtttcttgaggaaattacagggtttcca 825  Q
    ||||| |||| ||||||||||||||||||||||||||||| |||||    || |  || || |||||||||| |||||||||||||||| |||| |||||    
T  26851225 aatttaaaaattcttcccgagtgccttagtgaatgtcaccgtcttagggagcttgtat-tgtatggctgcaattttcttgaggaaattagagggattcca 26851323  T
Q  826 ccaaatct 833  Q
    || |||||    
T  26851324 ccgaatct 26851331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 323
Target Start/End: Original strand, 28141859 - 28141926
Alignment:
Q  256 ccaaatttagaaaagttatcgtttcaattttgtaagaatttaattacaattcacaattcagttgggtt 323  Q
    |||||||||||||  || || ||||||| ||||||||||||||||||| | |||||||| ||||||||    
T  28141859 ccaaatttagaaacattttcatttcaatgttgtaagaatttaattacagtacacaattctgttgggtt 28141926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 961 - 1015
Target Start/End: Original strand, 28789314 - 28789368
Alignment:
Q  961 aatcgataatgtaatacatcttattctaaactaacaggagctacacgaggctgga 1015  Q
    |||||||||||||| | |||||||||||||||||||| ||||| | |||||||||    
T  28789314 aatcgataatgtaacatatcttattctaaactaacagaagctaaatgaggctgga 28789368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 958 - 1012
Target Start/End: Original strand, 31290372 - 31290426
Alignment:
Q  958 tataatcgataatgtaatacatcttattctaaactaacaggagctacacgaggct 1012  Q
    |||||| |||||||||||| |||||||||||||||||||| | ||||| ||||||    
T  31290372 tataatagataatgtaatatatcttattctaaactaacagaaactacatgaggct 31290426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 501 - 546
Target Start/End: Original strand, 26805005 - 26805050
Alignment:
Q  501 cataggagaattgccattttcatttcaaaatctcagtgaacttgat 546  Q
    |||||||||||||| || ||||||||||||||| ||||||||||||    
T  26805005 cataggagaattgctatcttcatttcaaaatctgagtgaacttgat 26805050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1027 - 1144
Target Start/End: Original strand, 26658986 - 26659100
Alignment:
Q  1027 ttattttccaaccggaagtgaggggattccaaattggttcgagtatcaaatcagggtaaaccaaccaatttctttctcgtttcatgaaaagatcccttgt 1126  Q
    |||||||||||||||   |||| |||| ||| ||||||||||| | |||||||||| |   ||| || ||||||||| ||||| | |||||||||||| |    
T  26658986 ttattttccaaccggggctgagaggatcccagattggttcgagcaccaaatcagggga---caaacagtttctttctggtttcgtaaaaagatcccttct 26659082  T
Q  1127 ataacttgtattattctt 1144  Q
    || | ||||||| |||||    
T  26659083 attatttgtattcttctt 26659100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #87
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1027 - 1144
Target Start/End: Original strand, 26764957 - 26765071
Alignment:
Q  1027 ttattttccaaccggaagtgaggggattccaaattggttcgagtatcaaatcagggtaaaccaaccaatttctttctcgtttcatgaaaagatcccttgt 1126  Q
    |||||||||||||||   |||| |||| ||| ||||||||||| | |||||||||| |   ||| || ||||||||| ||||| | |||||||||||| |    
T  26764957 ttattttccaaccggggctgagaggatcccagattggttcgagcaccaaatcagggga---caaacagtttctttctggtttcgtaaaaagatcccttct 26765053  T
Q  1127 ataacttgtattattctt 1144  Q
    || | ||||||| |||||    
T  26765054 attatttgtattcttctt 26765071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #88
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 26804928 - 26804970
Alignment:
Q  424 tgtgagagtctcaagagttttccagaattattatgcaagatga 466  Q
    ||||| |||||||||||||||||| ||||||||||| ||||||    
T  26804928 tgtgatagtctcaagagttttccaaaattattatgcgagatga 26804970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #89
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1049 - 1141
Target Start/End: Original strand, 26851561 - 26851650
Alignment:
Q  1049 gggattccaaattggttcgagtatcaaatcagggtaaaccaaccaatttctttctcgtttcatgaaaagatcccttgtataacttgtattatt 1141  Q
    ||||||||| ||||||||||| | |||| ||||| ||||    ||||||| |||| ||||| | |||||||||||| |||||| |||||||||    
T  26851561 gggattccagattggttcgagcaccaaagcagggaaaaca---caatttccttctggtttcgtaaaaagatcccttctataacatgtattatt 26851650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #90
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 465
Target Start/End: Original strand, 27681371 - 27681437
Alignment:
Q  399 tcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatg 465  Q
    |||| ||||||||  ||||||| |||||||| ||||  | | |||||||||||||||||||||||||    
T  27681371 tcttaagaaattgatactctatgagtgtgagtgtcttgataattttccagaattattatgcaagatg 27681437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #91
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 326
Target Start/End: Original strand, 28238598 - 28238668
Alignment:
Q  256 ccaaatttagaaaagttatcgtttcaattttgtaagaatttaattacaattcacaattcagttgggttcct 326  Q
    |||||||||||||  || || |||||||  |||||||||||||||  ||||||||| || |||||||||||    
T  28238598 ccaaatttagaaatattttcatttcaatactgtaagaatttaattgaaattcacaaatctgttgggttcct 28238668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #92
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 326
Target Start/End: Original strand, 28245576 - 28245646
Alignment:
Q  256 ccaaatttagaaaagttatcgtttcaattttgtaagaatttaattacaattcacaattcagttgggttcct 326  Q
    |||||||||||||  || || ||||||||||||||||||||||||  ||||||  | || |||||||||||    
T  28245576 ccaaatttagaaatattttcatttcaattttgtaagaatttaattgaaattcatgaatctgttgggttcct 28245646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #93
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 569 - 602
Target Start/End: Original strand, 26625698 - 26625731
Alignment:
Q  569 gaatgctcaggttcccaaaacataatgataaaat 602  Q
    ||||||| ||||||||||||||||||||||||||    
T  26625698 gaatgctgaggttcccaaaacataatgataaaat 26625731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #94
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 569 - 602
Target Start/End: Original strand, 26731675 - 26731708
Alignment:
Q  569 gaatgctcaggttcccaaaacataatgataaaat 602  Q
    ||||||| ||||||||||||||||||||||||||    
T  26731675 gaatgctgaggttcccaaaacataatgataaaat 26731708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 140; Significance: 1e-72; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 140; E-Value: 1e-72
Query Start/End: Original strand, 176 - 916
Target Start/End: Complemental strand, 266327 - 265591
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||||||||| |  ||||||| || |||| ||| ||||||| ||||||||||||||| ||| | ||||||||||||||||| |||||| ||||| | ||    
T  266327 tgcagaagttccaggatatgaatgtcttgatattagaccattgtgaatatttaacccatatatctgatgtctcaggacttcctaatttaaaaaagctctc 266228  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagt 375  Q
     ||| ||  |||||||||||||||||||||||||||||||||||||| |||       ||||||||| ||||||||     |||||  |||||  |||||    
T  266227 atttaaagattgtaagaatttaattacaattcacaattcagttgggtacctaattaaacttgaaatcttagatgcaatgggttgcagaaagctaaagagt 266128  T
Q  376 tttccacctttacaactaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattata 475  Q
    |||||||| |||||||| |||| |||| || || ||||||||| |  ||||  ||||||||| || |||||| |||||||||||||||||| ||| ||||    
T  266127 tttccacccttacaactgccctctcttaaggaaatggaactctctgggtgttggagtctcaatagctttccaaaattattatgcaagatgacaaa-tata 266029  T
Q  476 -aagattttatgttgcacgaaacttgcataggagaattgccattttcatttcaaaatctcagtgaacttgatcgcttagaaataattggctgtcgaatgc 574  Q
     || || || ||||| | ||||||| |||| |||||||||||| |||||||||||||||||||| ||||  ||| |||  | ||   ||  || ||||||    
T  266028 gaaaatattttgttgtatgaaacttccataagagaattgccatcttcatttcaaaatctcagtggactttctcggttatcactagagggacgtggaatgc 265929  T
Q  575 tcaggttcccaaaacataatgataaaatcaattttatggtattttcaaatgtgcaccatcttagaattgaaaagagcaacctctcagatgaatttctcca 674  Q
       ||||||||||||||||||  |||||  ||| ||| || ||||| |||||  |   ||||  | | | ||| | ||| ||||||||||||| |||||     
T  265928 ---ggttcccaaaacataatgggaaaatgtattctatagtgttttccaatgtaaaagctctttcactcgtaaataacaatctctcagatgaatgtctccc 265832  T
Q  675 aatacttttgatgtggtgtgttagtgtggaaaatctatacttatctaagacaaatttcaaaactcttcccgagtgccttagtgaatgtcaccttcttaaa 774  Q
    ||||||| | | ||||||||||| ||||  | ||||| |||||   ||||  || |||||||||||||| |||||||||||||||||||||| ||||       
T  265831 aatacttctcaagtggtgtgttaatgtgatatatctaaacttaatgaagagcaagttcaaaactcttcctgagtgccttagtgaatgtcaccatcttgtt 265732  T
Q  775 tgcattaatgtggatggctgcaagtttcttgaggaaattacagggtttccaccaaatcttgaaaga-tttcacgcagaggaatgttattcattgagttcc 873  Q
       ||||| |||  |  |||||||| |||||||||||||| |||| |||||||||||||| |||||  ||   ||  | |||||  | ||||||||||||    
T  265731 aaaattaacgtgagttactgcaagtatcttgaggaaattagagggattccaccaaatctt-aaagagctttttgcgtatgaatgcaactcattgagttcc 265633  T
Q  874 tcaagtagacgattgttattgagtcaggtttgtttgttgtttt 916  Q
    ||||||| | || ||||||||||||||||||| ||||||||||    
T  265632 tcaagtaaaagaatgttattgagtcaggtttg-ttgttgtttt 265591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 176 - 543
Target Start/End: Complemental strand, 28125689 - 28125322
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||||||||| |  |||||||||| ||||| ||| ||  || ||||||||||||||| |||||||||||||||   |||||||||||||||||||| ||    
T  28125689 tgcagaagttcgagaatatgaaagtcttgactttgaacttttgtgaatatttaacccatatacccgatgtctcacatcttccaaatttagaaaagttctc 28125590  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagt 375  Q
     |||  || |||| | |||||||||||||||||||||||  |||||| |||       |||||| || |||||||||    ||||| ||||||| |||||    
T  28125589 atttgcatattgtgataatttaattacaattcacaattcgattgggtacctaaataaacttgaagtcttagatgcagaaggttgcagcaagctcgagagt 28125490  T
Q  376 tttccacctttacaactaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattata 475  Q
    ||||| || |||||  |  |||||||| || ||||| |||||  | | ||||||||||||||||||||||||||||||||| ||||||||| ||| ||||    
T  28125489 tttccccccttacagttgacctgtcttaaggaattgaaactcagtgaatgtgagagtctcaagagttttccagaattattaggcaagatgacaaa-tata 28125391  T
Q  476 -aagattttatgttgcacgaaacttgcataggagaattgccattttcatttcaaaatctcagtgaactt 543  Q
     ||||  ||  |||||  | ||||| |||| ||||||| ||||||||||||||||||||||||||||||    
T  28125390 gaagagatttggttgcgtggaacttccataagagaattaccattttcatttcaaaatctcagtgaactt 28125322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 176 - 544
Target Start/End: Original strand, 26138098 - 26138466
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||||||||| | ||||||||||| ||||  ||  || ||| | ||||||||||  |  |||||||||||||||| |||| ||||||||||||||| ||    
T  26138098 tgcagaagttcgagtatatgaaagttttgagctttaacgattgtcaatatttaactgatctacccgatgtctcaggtcttcaaaatttagaaaagttctc 26138197  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagt 375  Q
     ||| ||  |||||| |||||||||||||||||||||||| ||||||||||       ||||||| | || |||||     ||||||||||||| |||||    
T  26138198 atttgaaaattgtaacaatttaattacaattcacaattcaattgggttcctaaataaacttgaaaccttaaatgcaaagggttgcatcaagctcgagagt 26138297  T
Q  376 tttccacctttacaactaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattata 475  Q
    |||||||| |||||  |  ||| |||| ||||||||||||||| ||  ||| |||||||||||||||||||||||||| |  | | | ||| ||||   |    
T  26138298 tttccacccttacagttgacctctcttaagaaattggaactctctatttgtaagagtctcaagagttttccagaattagttggtaggttgacaaatataa 26138397  T
Q  476 aagattttatgttgcacgaaacttgcataggagaattgccattttcatttcaaaatctcagtgaacttg 544  Q
    ||||  ||  |||| | | ||| | ||||||||||||||||||||||||||||||| ||||||||||||    
T  26138398 aagacatttggttgtatggaacctccataggagaattgccattttcatttcaaaatttcagtgaacttg 26138466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 52 - 137
Target Start/End: Complemental strand, 28125819 - 28125733
Alignment:
Q  52 gaagtctctatcatcttgtattttgaataaggcaagtgaaataagttcagttttcaattgtgcatatttat-aattcactattagat 137  Q
    |||||||||||||||| || ||||||| ||||||||||||||||||||| |||  ||||||| |||||||| |||||||||||||||    
T  28125819 gaagtctctatcatctagttttttgaacaaggcaagtgaaataagttcattttcaaattgtgtatatttatgaattcactattagat 28125733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 315
Target Start/End: Complemental strand, 28130727 - 28130588
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||||||||| |  ||| |||||| ||||||||| ||   | | ||||||||||| | |||||| ||||||||   |||||||||||||||||||| ||    
T  28130727 tgcagaagttcgagaatacgaaagtcttgacattgaacttctgtaaatatttaaccaatatacccaatgtctcacatcttccaaatttagaaaagttctc 28130628  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattca 315  Q
     ||| ||  |||| | ||||||||||||||||||||||||    
T  28130627 atttgaaaattgtgataatttaattacaattcacaattca 28130588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 52 - 137
Target Start/End: Complemental strand, 28130857 - 28130771
Alignment:
Q  52 gaagtctctatcatcttgtattttgaataaggcaagtgaaataagttcagttttcaattgtgcatatttat-aattcactattagat 137  Q
    |||| ||||||||||| || ||||||| ||||||||||||||||||||| ||| |||||||| |||||| | ||||||| |||||||    
T  28130857 gaagcctctatcatctagttttttgaacaaggcaagtgaaataagttcattttccaattgtgtatatttttgaattcaccattagat 28130771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 733 - 830
Target Start/End: Complemental strand, 28125066 - 28124969
Alignment:
Q  733 aaaactcttcccgagtgccttagtgaatgtcaccttcttaaatgcattaatgtggatggctgcaagtttcttgaggaaattacagggtttccaccaaa 830  Q
    |||| |||||||||||| |||||||||||||||||||| ||   | |||   |||||| |||||||| |||||||||||||| |||| ||||||||||    
T  28125066 aaaattcttcccgagtgtcttagtgaatgtcaccttctaaaggtccttagattggatgactgcaagtctcttgaggaaattagagggattccaccaaa 28124969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 424 - 543
Target Start/End: Complemental strand, 28130472 - 28130353
Alignment:
Q  424 tgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattata-aagattttatgttgcacgaaacttgcataggagaattgccattttca 522  Q
    |||||||||||||| |  ||||||||||||||| ||||| ||| |||| ||| ||||  ||| ||||   ||||||| |||| ||||||| |||||||||    
T  28130472 tgtgagagtctcaaaaaatttccagaattattaggcaagttgacaaat-atacaagagattaggttgagtgaaacttccataagagaattaccattttca 28130374  T
Q  523 tttcaaaatctcagtgaactt 543  Q
    ||||||||||| |||||||||    
T  28130373 tttcaaaatctaagtgaactt 28130353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 728 - 833
Target Start/End: Original strand, 26138716 - 26138821
Alignment:
Q  728 atttcaaaactcttcccgagtgccttagtgaatgtcaccttctta-aatgcattaatgtggatggctgcaagtttcttgaggaaattacagggtttccac 826  Q
    |||| |||| |||||| |||||||||| ||||||||||||| ||| ||| | | ||| |||||||||||||    ||||||||||||| |||| ||||||    
T  26138716 attttaaaattcttcctgagtgccttaatgaatgtcaccttattagaatccttgaat-tggatggctgcaaaaaccttgaggaaattaaagggattccac 26138814  T
Q  827 caaatct 833  Q
    |||||||    
T  26138815 caaatct 26138821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 740 - 830
Target Start/End: Complemental strand, 28130090 - 28130000
Alignment:
Q  740 ttcccgagtgccttagtgaatgtcaccttcttaaatgcattaatgtggatggctgcaagtttcttgaggaaattacagggtttccaccaaa 830  Q
    |||| ||||| |||| ||||||||||| |||||  ||| |||   |||| |  ||||||| |||||||||||||| |||||||||||||||    
T  28130090 ttccggagtgtcttaatgaatgtcaccatcttagttgccttagattggaggattgcaagtctcttgaggaaattagagggtttccaccaaa 28130000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 76; Significance: 2e-34; HSPs: 3)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 76; E-Value: 2e-34
Query Start/End: Original strand, 424 - 907
Target Start/End: Original strand, 9947 - 10430
Alignment:
Q  424 tgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattataaagattttatgttgcacgaaacttgcataggagaattgccattttcat 523  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||   |||    ||  ||||||  |||||| |||| |||||||||||| |||||    
T  9947 tgtgagagtctcaagagttttccaaaattattatgcaagatgacaaatatgaaaacgatttggttgcagaaaacttccataagagaattgccatcttcat 10046  T
Q  524 ttcaaaatctcagtgaacttgatcgcttagaaataattggctgtcgaatgctcaggttcccaaaacataatgataaaatcaattttatggtattttcaaa 623  Q
    |||||||||||| |||||||  ||  |||    ||   |  ||| ||||||| |||||||||||||| |||||| ||||  ||| ||| || ||||||||    
T  10047 ttcaaaatctcaatgaactttttcagttaacgctatgggaatgtggaatgctgaggttcccaaaacagaatgatcaaatgtattctatagtgttttcaaa 10146  T
Q  624 tgtgcaccatcttagaattgaaaagagcaacctctcagatgaatttctccaaatacttttgatgtggtgtgttagtgtggaaaatctatacttatctaag 723  Q
     |||    |||||    |  | ||  |||| ||||||||||||| ||||| |||| || | | ||||||||||| |||| ||   ||| ||||||| | |    
T  10147 agtgacaaatcttgttctcaataattgcaagctctcagatgaatgtctcccaatatttctcaagtggtgtgttaatgtgaaattgctagacttatcaagg 10246  T
Q  724 acaaatttcaaaactcttcccgagtgccttagtgaatgtcaccttcttaaatgcattaatgtggatggctgcaagtttcttgaggaaattacagggtttc 823  Q
    |  |||||||||  | |||| |||||||||||||||||||||||||||||   | |||   |||||  |||||||| ||| |||||||||| |||| ||     
T  10247 aacaatttcaaacttattcctgagtgccttagtgaatgtcaccttcttaataaccttatattggataactgcaagtctctggaggaaattagagggattg 10346  T
Q  824 caccaaatcttgaaagatttcacgcagaggaatgttattcattgagttcctcaagtagacgattgttattgagtcaggtttgtt 907  Q
    ||||||||||||||||  ||   |||  || |||  | ||||||||||||||||||||| || || ||||||||||||||||||    
T  10347 caccaaatcttgaaaggctttctgcaatgggatgcaaatcattgagttcctcaagtagaagaatgctattgagtcaggtttgtt 10430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 65; E-Value: 7e-28
Query Start/End: Original strand, 176 - 320
Target Start/End: Original strand, 9699 - 9843
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||||||||| |  | |||||| | ||||||||||||   | ||||||||||||||| ||||| ||||||||||| |||| ||||||||||||||| ||    
T  9699 tgcagaagttccagaacatgaaaatcttgacattggacaggtgtgaatatttaacccatatacctgatgtctcaggtcttcaaaatttagaaaagttctc 9798  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattcagttgg 320  Q
     ||| ||| |||| |||||||||||||||||||||||||| ||||    
T  9799 ctttgaatattgtgagaatttaattacaattcacaattcaattgg 9843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #3
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 961 - 1015
Target Start/End: Original strand, 10464 - 10518
Alignment:
Q  961 aatcgataatgtaatacatcttattctaaactaacaggagctacacgaggctgga 1015  Q
    |||||||||||||| | |||||||||||||||||||| ||||| | |||||||||    
T  10464 aatcgataatgtaacatatcttattctaaactaacagaagctaaatgaggctgga 10518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 76; Significance: 2e-34; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 76; E-Value: 2e-34
Query Start/End: Original strand, 191 - 543
Target Start/End: Original strand, 61786 - 62138
Alignment:
Q  191 atatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatcgtttcaattttgtaa 290  Q
    |||||||||| |||| ||| ||| ||| | || |||||| | | | ||||||||||||| | |||||||||||||||||||| ||||||  |   ||| |    
T  61786 atatgaaagtgttgatattcgacaattgtcaagatttaatctatacacccgatgtctcatggcttccaaatttagaaaagttctcgtttgcaagatgtca 61885  T
Q  291 gaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagttttccacctttacaa 390  Q
     |||||| ||||||||||||||||| || | | |||        | |||||| || ||||||    ||||   |||||| ||||||||||||| |||||     
T  61886 taatttagttacaattcacaattcacttagatacctaaatagattagaaatcttaaatgcagagggttgcgagaagctcgagagttttccacccttacag 61985  T
Q  391 ctaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattataaagattttatgttgc 490  Q
       |||| |||| |||| |||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||| ||||   |||  | |  |||||     
T  61986 tctccctctcttcagaatttggaactctctaattgtaagagtctcaagagttttccagaattattatgcaagatgacaaatataaaatctatcttgttga 62085  T
Q  491 acgaaacttgcataggagaattgccattttcatttcaaaatctcagtgaactt 543  Q
    | ||||||| |||||||||||| |||||||| ||||||||||| |||||||||    
T  62086 aggaaacttccataggagaatttccattttcctttcaaaatcttagtgaactt 62138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 2e-34; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 2e-34
Query Start/End: Original strand, 191 - 543
Target Start/End: Original strand, 18075978 - 18076330
Alignment:
Q  191 atatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatcgtttcaattttgtaa 290  Q
    |||||||||| |||| ||| ||| ||| | || |||||| | | | ||||||||||||| | |||||||||||||||||||| ||||||  |   ||| |    
T  18075978 atatgaaagtgttgatattcgacaattgtcaagatttaatctatacacccgatgtctcatggcttccaaatttagaaaagttctcgtttgcaagatgtca 18076077  T
Q  291 gaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagttttccacctttacaa 390  Q
     |||||| ||||||||||||||||| || | | |||        | |||||| || ||||||    ||||   |||||| ||||||||||||| |||||     
T  18076078 taatttagttacaattcacaattcacttagatacctaaatagattagaaatcttaaatgcagagggttgcgagaagctcgagagttttccacccttacag 18076177  T
Q  391 ctaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattataaagattttatgttgc 490  Q
       |||| |||| |||| |||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||| ||||   |||  | |  |||||     
T  18076178 tctccctctcttcagaatttggaactctctaattgtaagagtctcaagagttttccagaattattatgcaagatgacaaatataaaatctatcttgttga 18076277  T
Q  491 acgaaacttgcataggagaattgccattttcatttcaaaatctcagtgaactt 543  Q
    | ||||||| |||||||||||| |||||||| ||||||||||| |||||||||    
T  18076278 aggaaacttccataggagaatttccattttcctttcaaaatcttagtgaactt 18076330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 2e-34
Query Start/End: Original strand, 191 - 471
Target Start/End: Complemental strand, 18722091 - 18721811
Alignment:
Q  191 atatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatcgtttcaattttgtaa 290  Q
    |||||||||| |||||||||||| | | | ||||||||||||| |||||| |||||||||| ||||||||||||||||| || ||||||| ||||||| |    
T  18722091 atatgaaagtcttgacattggacaagtgtcaatatttaacccatatacccaatgtctcaggtcttccaaatttagaaaaattctcgtttcgattttgtga 18721992  T
Q  291 gaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagttttccacctttacaa 390  Q
     ||||||||| || ||||| ||||  |||||  |||       ||||||||| || |||||      |||||||||||  ||||||||||||| |||       
T  18721991 taatttaattgcagttcacgattcgattgggaacctaaataaacttgaaatcttaaatgcatctggatgcatcaagcttgagagttttccacccttatgg 18721892  T
Q  391 ctaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaat 471  Q
    || |||| ||||||| ||||||| |||| |   |||||||| |||||||||||||||||| ||||||| ||||||| ||||    
T  18721891 ctgccctctcttgaggaattggacctctctttttgtgagagactcaagagttttccagaactattatgtaagatgacaaat 18721811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 191 - 471
Target Start/End: Complemental strand, 18729513 - 18729233
Alignment:
Q  191 atatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatcgtttcaattttgtaa 290  Q
    |||||||||| |||||||||||| | | | ||||||||||||| |||||| |||||||||| ||||||||||||||||| || |||||||||| |||| |    
T  18729513 atatgaaagtcttgacattggacaagtgtcaatatttaacccatatacccaatgtctcaggtcttccaaatttagaaaaattctcgtttcaatattgtga 18729414  T
Q  291 gaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagttttccacctttacaa 390  Q
     ||||||||| |||||||| ||||  |||||   ||       ||||||||| || ||||| |    |||||||||||  ||| ||||||||| || |      
T  18729413 caatttaattgcaattcacgattcgattgggaagctaaataaacttgaaatcttaaatgcatggggatgcatcaagcttgagaattttccacccttgcgg 18729314  T
Q  391 ctaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaat 471  Q
    || |||| |||| || ||||||| |||  | | ||| |||| |||||||||||||||||||||||||| ||||||| ||||    
T  18729313 ctgccctctcttaaggaattggacctcacttattgtaagagactcaagagttttccagaattattatgtaagatgacaaat 18729233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 191 - 471
Target Start/End: Complemental strand, 18677577 - 18677297
Alignment:
Q  191 atatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatcgtttcaattttgtaa 290  Q
    |||||||||| |||||||||||| ||| |  |||||||||||| |||||| |||||||||| ||||||||||||||||| || ||||||| ||||||| |    
T  18677577 atatgaaagtcttgacattggactattgtctatatttaacccatatacccaatgtctcaggtcttccaaatttagaaaaattctcgtttcgattttgtga 18677478  T
Q  291 gaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagttttccacctttacaa 390  Q
     ||||||||| |||||||| ||||  |||||  |||       ||||||||| || ||||| |    |||| ||||||  ||| ||||||||| |||       
T  18677477 taatttaattgcaattcacgattcgattgggaacctaaataaacttgaaatcttaaatgcatgggcatgcaccaagcttgagaattttccacccttatgg 18677378  T
Q  391 ctaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaat 471  Q
    || |||| |||  || ||||||| |||| |   ||| |||| |||||||||||||||||||||||||| ||||||| ||||    
T  18677377 ctgccctctctgaaggaattggacctctctttttgtaagagactcaagagttttccagaattattatgtaagatgacaaat 18677297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 191 - 471
Target Start/End: Complemental strand, 18653495 - 18653215
Alignment:
Q  191 atatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatcgtttcaattttgtaa 290  Q
    |||||||||| |||||||||||| ||| | ||||||||||||| |||||| |||||| ||| ||||| ||||||||| | || ||||||||||||||||     
T  18653495 atatgaaagtcttgacattggacaattgtcaatatttaacccatatacccaatgtcttaggtcttcctaatttagaataattctcgtttcaattttgtat 18653396  T
Q  291 gaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagttttccacctttacaa 390  Q
     ||||||||| |||||||| ||||  |||||  |||       |||||||||||| ||||| |    ||||  |||||  ||||||||||||| |||       
T  18653395 taatttaattgcaattcacgattcgattgggaacctaaataaacttgaaatcataaatgcatggggatgcaggaagcttgagagttttccacccttatgg 18653296  T
Q  391 ctaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaat 471  Q
    || |||| |||| || |||||||  ||| | | ||| |||| |||||| ||||||||||| ||||||| ||||||| ||||    
T  18653295 ctgccctctcttaaggaattggacgtctcttattgtaagagactcaagtgttttccagaactattatgtaagatgacaaat 18653215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 191 - 314
Target Start/End: Complemental strand, 18687632 - 18687509
Alignment:
Q  191 atatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatcgtttcaattttgtaa 290  Q
    |||||||||| |||||||||||| ||| | ||||||||||||| |||||| |||||| ||| ||||||||||||||| | || |||||| ||| ||||||    
T  18687632 atatgaaagtcttgacattggacaattgtcaatatttaacccatatacccaatgtcttaggtcttccaaatttagaataattctcgttttaatattgtaa 18687533  T
Q  291 gaatttaattacaattcacaattc 314  Q
     ||||||||| |||||||| ||||    
T  18687532 taatttaattgcaattcacgattc 18687509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 191 - 471
Target Start/End: Complemental strand, 18697420 - 18697140
Alignment:
Q  191 atatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatcgtttcaattttgtaa 290  Q
    |||||||||| |||||||||||| ||| | ||||||||||||| |||||| |||||||||| ||||||||||||||| | || |||||| ||   |||||    
T  18697420 atatgaaagtcttgacattggacaattgtcaatatttaacccatatacccaatgtctcaggtcttccaaatttagaagaattctcgtttgaaaaatgtaa 18697321  T
Q  291 gaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagttttccacctttacaa 390  Q
     ||||||||| |||||||| ||||  || ||  |||       |||||||||||| ||||| |    |||| ||||||  ||||||||||||| |||       
T  18697320 caatttaattgcaattcacgattcgattaggaacctaaataaacttgaaatcataaatgcatgtggatgcagcaagcttgagagttttccacccttatgg 18697221  T
Q  391 ctaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaat 471  Q
    || |||| |||  || |||||||  ||| | | |||  ||| |||||||||||||||||||||||||| ||||||| ||||    
T  18697220 ctgccctctctgaaggaattggacatctcttattgtaggagactcaagagttttccagaattattatgtaagatgacaaat 18697140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 862 - 1141
Target Start/End: Complemental strand, 18696761 - 18696488
Alignment:
Q  862 tcattgagttcctcaagtagacgattgttattgagtcaggtttgtttgttgttttatcgtgcagtaatatttgatggatagtatttgatattgatatata 961  Q
    ||||||||||||||||||||| || ||||||||||||||||||| |||||||||| || |||| || ||||||||   ||||||      || | |||||    
T  18696761 tcattgagttcctcaagtagaagaatgttattgagtcaggtttg-ttgttgttttttcttgcaatagtatttgatatgtagtat------ttcacatata 18696669  T
Q  962 atcgataatgt----aatacatcttattctaaactaacaggagctacacgaggctggacacacggaattttattttccaaccggaagtgaggggattcca 1057  Q
    ||| | |||||     ||| ||||||| |||||||||||| |  |||| ||||||||   |||  |||||| ||| |||| |||||  ||||||||||||    
T  18696668 atcaacaatgtgtaatatatatcttatgctaaactaacagcaattacatgaggctgggtgcaccaaattttctttcccaaacggaacagaggggattcca 18696569  T
Q  1058 aattggttcgagtatcaaatcagggtaaaccaaccaatttctttctcgtttcatgaaaagatcccttgtataacttgtattatt 1141  Q
     ||||||||||| |||||| |||||     ||| |||||||||||| ||| | | |||||||||||| ||||| || |||||||    
T  18696568 gattggttcgagcatcaaagcaggg---gtcaatcaatttctttctggttccgtaaaaagatcccttctataaattttattatt 18696488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 801 - 936
Target Start/End: Complemental strand, 18721493 - 18721359
Alignment:
Q  801 tcttgaggaaattacagggtttccaccaaatcttgaaagat-ttcacgcagaggaatgttattcattgagttcctcaagtagacgattgttattgagtca 899  Q
    |||||||||||||| |||||||||||| |||||  ||| || || | |||   |||||| | ||||||||||||||||||||| || |||||||||||||    
T  18721493 tcttgaggaaattagagggtttccaccgaatctc-aaatatcttgaagcattagaatgtaaatcattgagttcctcaagtagaagaatgttattgagtca 18721395  T
Q  900 ggtttgtttgttgttttatcgtgcagtaatatttgat 936  Q
    |||||| |||||||||| || |||| || ||||||||    
T  18721394 ggtttg-ttgttgttttttcttgcaatagtatttgat 18721359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 862 - 936
Target Start/End: Complemental strand, 18652836 - 18652763
Alignment:
Q  862 tcattgagttcctcaagtagacgattgttattgagtcaggtttgtttgttgttttatcgtgcagtaatatttgat 936  Q
    ||||||||||||||||||||| || ||||||||||||||||||| |||||||||| || |||| || ||||||||    
T  18652836 tcattgagttcctcaagtagaagaatgttattgagtcaggtttg-ttgttgttttttcttgcaatagtatttgat 18652763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 862 - 936
Target Start/End: Complemental strand, 18676918 - 18676845
Alignment:
Q  862 tcattgagttcctcaagtagacgattgttattgagtcaggtttgtttgttgttttatcgtgcagtaatatttgat 936  Q
    ||||||||||||||||||||| || ||||||||||||||||||| |||||||||| || |||| || ||||||||    
T  18676918 tcattgagttcctcaagtagaagaatgttattgagtcaggtttg-ttgttgttttttcttgcaatagtatttgat 18676845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 862 - 936
Target Start/End: Complemental strand, 18686967 - 18686894
Alignment:
Q  862 tcattgagttcctcaagtagacgattgttattgagtcaggtttgtttgttgttttatcgtgcagtaatatttgat 936  Q
    ||||||||||||||||||||| || ||||||||||||||||||| |||||||||| || |||| || ||||||||    
T  18686967 tcattgagttcctcaagtagaagaatgttattgagtcaggtttg-ttgttgttttttcttgcaatagtatttgat 18686894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 727 - 770
Target Start/End: Complemental strand, 18687102 - 18687059
Alignment:
Q  727 aatttcaaaactcttcccgagtgccttagtgaatgtcaccttct 770  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  18687102 aatttcaaaattcttcccgagtgccttagtgaatgtcaccttct 18687059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 801 - 907
Target Start/End: Complemental strand, 18728915 - 18728809
Alignment:
Q  801 tcttgaggaaattacagggtttccaccaaatcttgaaagatttcacgcagaggaatgttattcattgagttcctcaagtagacgattgttattgagtcag 900  Q
    |||||||||||||| |||||||||||| |||||  || |  || | |||   |||||| | |||||||||||||||| |||| || ||||||||||||||    
T  18728915 tcttgaggaaattagagggtttccaccgaatctcaaatgtcttgatgcatttgaatgtaaatcattgagttcctcaactagaagaatgttattgagtcag 18728816  T
Q  901 gtttgtt 907  Q
    |||||||    
T  18728815 gtttgtt 18728809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 727 - 768
Target Start/End: Complemental strand, 18682210 - 18682169
Alignment:
Q  727 aatttcaaaactcttcccgagtgccttagtgaatgtcacctt 768  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  18682210 aatttcaaaattcttcccgagtgccttagtgaatgtcacctt 18682169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 727 - 768
Target Start/End: Complemental strand, 18726486 - 18726445
Alignment:
Q  727 aatttcaaaactcttcccgagtgccttagtgaatgtcacctt 768  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  18726486 aatttcaaaattcttcccgagtgccttagtgaatgtcacctt 18726445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 730 - 770
Target Start/End: Complemental strand, 18696893 - 18696853
Alignment:
Q  730 ttcaaaactcttcccgagtgccttagtgaatgtcaccttct 770  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  18696893 ttcaaaattcttcccgagtgccttagtgaatgtcaccttct 18696853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 801 - 947
Target Start/End: Complemental strand, 18726412 - 18726268
Alignment:
Q  801 tcttgaggaaattacagggtttccaccaaatcttgaaagatttcacgcagaggaatgttattcattgagttcctcaagtagacgattgttattgagtcag 900  Q
    |||||||||||||| |||||||||||| |||||  || |  |||  |||   | |||| | |||||||||||||||| |||| |||| || |||||||||    
T  18726412 tcttgaggaaattagagggtttccaccgaatctcaaatgtcttcgtgcattaggatgtaaatcattgagttcctcaaatagaagatt-ttgttgagtcag 18726314  T
Q  901 gtttgtttgttgttttatcgtgcagtaatatttgatggatagtattt 947  Q
    ||||| |||||||||| || |||| || |||||||||  ||||||||    
T  18726313 gtttg-ttgttgttttttcttgcaatagtatttgatgtgtagtattt 18726268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 862 - 947
Target Start/End: Complemental strand, 18682120 - 18682036
Alignment:
Q  862 tcattgagttcctcaagtagacgattgttattgagtcaggtttgtttgttgttttatcgtgcagtaatatttgatggatagtattt 947  Q
    |||||||||| ||||| |||| || |||| |||||||||||||| |||||||||| || |||| || |||||||||  ||||||||    
T  18682120 tcattgagttgctcaaatagaagaatgttgttgagtcaggtttg-ttgttgttttttcttgcaatagtatttgatgtgtagtattt 18682036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 495 - 536
Target Start/End: Complemental strand, 18682432 - 18682391
Alignment:
Q  495 aacttgcataggagaattgccattttcatttcaaaatctcag 536  Q
    ||||| |||| |||||||||||||||||||||||||||||||    
T  18682432 aacttccataagagaattgccattttcatttcaaaatctcag 18682391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 495 - 536
Target Start/End: Complemental strand, 18726708 - 18726667
Alignment:
Q  495 aacttgcataggagaattgccattttcatttcaaaatctcag 536  Q
    ||||| |||| |||||||||||||||||||||||||||||||    
T  18726708 aacttccataagagaattgccattttcatttcaaaatctcag 18726667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 570 - 602
Target Start/End: Complemental strand, 18682369 - 18682337
Alignment:
Q  570 aatgctcaggttcccaaaacataatgataaaat 602  Q
    |||||||||||||||||||||||||||||||||    
T  18682369 aatgctcaggttcccaaaacataatgataaaat 18682337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 570 - 602
Target Start/End: Complemental strand, 18726645 - 18726613
Alignment:
Q  570 aatgctcaggttcccaaaacataatgataaaat 602  Q
    |||||||||||||||||||||||||||||||||    
T  18726645 aatgctcaggttcccaaaacataatgataaaat 18726613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 315
Target Start/End: Complemental strand, 5088993 - 5088934
Alignment:
Q  256 ccaaatttagaaaagttatcgtttcaattttgtaagaatttaattacaattcacaattca 315  Q
    ||||||||||||||  | || |||||||  |||||||||||| |||||||||||||||||    
T  5088993 ccaaatttagaaaaaatttcatttcaatcatgtaagaatttagttacaattcacaattca 5088934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 727 - 766
Target Start/End: Complemental strand, 18677053 - 18677014
Alignment:
Q  727 aatttcaaaactcttcccgagtgccttagtgaatgtcacc 766  Q
    |||||||||| ||||||||||||||||| |||||||||||    
T  18677053 aatttcaaaattcttcccgagtgccttaatgaatgtcacc 18677014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 506 - 536
Target Start/End: Complemental strand, 18687317 - 18687287
Alignment:
Q  506 gagaattgccattttcatttcaaaatctcag 536  Q
    |||||||||||||||||||||||||||||||    
T  18687317 gagaattgccattttcatttcaaaatctcag 18687287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 433 - 471
Target Start/End: Complemental strand, 18687390 - 18687352
Alignment:
Q  433 ctcaagagttttccagaattattatgcaagatgaaaaat 471  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  18687390 ctcaagagttttccagaattattatgtaagatgacaaat 18687352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 506 - 536
Target Start/End: Complemental strand, 18697105 - 18697075
Alignment:
Q  506 gagaattgccattttcatttcaaaatctcag 536  Q
    |||||||||||||||||||||||||||||||    
T  18697105 gagaattgccattttcatttcaaaatctcag 18697075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 18697601 - 18697531
Alignment:
Q  54 agtctctatcatcttgtattttgaataaggcaagtgaaataagttcagttttcaattgtgcatatttataa 124  Q
    |||||||||||||||||||||  |  |||||||||||||||| |||| |||  ||||||  ||||||||||    
T  18697601 agtctctatcatcttgtatttgcagcaaggcaagtgaaataatttcattttctaattgtatatatttataa 18697531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 506 - 536
Target Start/End: Complemental strand, 18721776 - 18721746
Alignment:
Q  506 gagaattgccattttcatttcaaaatctcag 536  Q
    |||||||||||||||||||||||||||||||    
T  18721776 gagaattgccattttcatttcaaaatctcag 18721746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 730 - 768
Target Start/End: Complemental strand, 18728986 - 18728948
Alignment:
Q  730 ttcaaaactcttcccgagtgccttagtgaatgtcacctt 768  Q
    ||||||| |||||| ||||||||||||||||||||||||    
T  18728986 ttcaaaattcttcctgagtgccttagtgaatgtcacctt 18728948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 727 - 768
Target Start/End: Complemental strand, 18652971 - 18652930
Alignment:
Q  727 aatttcaaaactcttcccgagtgccttagtgaatgtcacctt 768  Q
    |||||||||| ||||||||||| ||||| |||||||||||||    
T  18652971 aatttcaaaattcttcccgagtaccttaatgaatgtcacctt 18652930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 570 - 627
Target Start/End: Complemental strand, 18653128 - 18653071
Alignment:
Q  570 aatgctcaggttcccaaaacataatgataaaatcaattttatggtattttcaaatgtg 627  Q
    ||||||||||||||||||||||||||| |||||  ||| |||  | ||||||||||||    
T  18653128 aatgctcaggttcccaaaacataatgagaaaatgtattctataatgttttcaaatgtg 18653071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 507 - 536
Target Start/End: Complemental strand, 18677261 - 18677232
Alignment:
Q  507 agaattgccattttcatttcaaaatctcag 536  Q
    ||||||||||||||||||||||||||||||    
T  18677261 agaattgccattttcatttcaaaatctcag 18677232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 570 - 627
Target Start/End: Complemental strand, 18721724 - 18721667
Alignment:
Q  570 aatgctcaggttcccaaaacataatgataaaatcaattttatggtattttcaaatgtg 627  Q
    ||||||||||||||||||||||||||| |||||  ||| |||  | ||||||||||||    
T  18721724 aatgctcaggttcccaaaacataatgagaaaatgtattctataatgttttcaaatgtg 18721667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 570 - 627
Target Start/End: Complemental strand, 18729146 - 18729089
Alignment:
Q  570 aatgctcaggttcccaaaacataatgataaaatcaattttatggtattttcaaatgtg 627  Q
    ||||||||||||||||||||||||||| |||||  ||| |||  | ||||||||||||    
T  18729146 aatgctcaggttcccaaaacataatgagaaaatgtattctataatgttttcaaatgtg 18729089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 66; Significance: 2e-28; HSPs: 4)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 424 - 1015
Target Start/End: Complemental strand, 2439 - 1868
Alignment:
Q  424 tgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattataaagattttatg-ttgcacgaaacttgcataggagaattgccattttca 522  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||| || || ||  | || |||||  |||||| |||| |||||||||||| ||||    
T  2439 tgtgagagtctcaagagttttccaaaattattatgcaagatgacaaat-atgaaaatgatttggttgcagaaaacttccataagagaattgccatcttca 2341  T
Q  523 tttcaaaatctcagtgaacttgatcgcttagaaataattggctgtcgaatgctcaggttcccaaaacataatgataaaatcaattttatggtattttcaa 622  Q
    ||||||||||||| |||||||  ||  |||    ||   |  ||| ||||||| |||||||||||||| |||||| ||||  ||| ||| || |||||||    
T  2340 tttcaaaatctcaatgaactttttctgttaacgctatgggaatgtggaatgctgaggttcccaaaacagaatgatcaaatgtattctatagtgttttcaa 2241  T
Q  623 atgtgcaccatcttagaattgaaaagagcaacctctcagatgaatttctccaaatacttttgatgtggtgtgttagtgtggaaaatctatacttatctaa 722  Q
    | |||    ||||||   |  |  |  |||| ||||||||||||| ||||| |||| || | | ||||||||||| ||||  |  |||| |||||||  |    
T  2240 aagtgacaaatcttattctccatgattgcaagctctcagatgaatgtctcccaatatttctcaagtggtgtgttaatgtgacatctctagacttatcata 2141  T
Q  723 gacaaatttcaaaactcttcccgagtgccttagtgaatgtcaccttcttaaatgcattaatgtggatggctgcaagtttcttgaggaaattacagggttt 822  Q
     |  |||||||||  | |||| |||||||||||||||||||||||||||||   | |||   |||||  |||||||| ||| |||||||||| |||| ||    
T  2140 taacaatttcaaacttattcctgagtgccttagtgaatgtcaccttcttaatatccttatattggataactgcaagtctctggaggaaattagagggatt 2041  T
Q  823 ccaccaaatcttgaaa-gatttcacgcagaggaatgttattcattgagttcctcaagtagacgattgttattgagtcaggtttgtttgttgttttatcgt 921  Q
    |||||||||||||||| | ||||  |||  || |||  | ||||||||||| ||||||||| || || ||||||||||||||||||    |||||||| |    
T  2040 ccaccaaatcttgaaatgctttct-gcaatgggatgcaaatcattgagttcttcaagtagaagaatgctattgagtcaggtttgtt----gttttatctt 1946  T
Q  922 gcagtaatatttgatggatagtatttgatattgatatataatcgataatgtaatacatcttattctaaactaacaggagctacacgaggctgga 1015  Q
    |||   ||||       ||||||||  ||||      | |||||||||||||| | |||||||||||||||||||| ||||||| |||||||||    
T  1945 gca---atat-------atagtattacatat------acaatcgataatgtaacatatcttattctaaactaacagaagctacatgaggctgga 1868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 65; E-Value: 7e-28
Query Start/End: Original strand, 176 - 320
Target Start/End: Complemental strand, 2687 - 2543
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||||||||| |  | |||||| | ||||||||||||   | ||||||||||||||| ||||| ||||||||||| |||| ||||||||||||||| ||    
T  2687 tgcagaagttccagaacatgaaaatcttgacattggacaggtgtgaatatttaacccatatacctgatgtctcaggtcttcaaaatttagaaaagttctc 2588  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattcagttgg 320  Q
     ||| ||| |||| |||||||||||||||||||||||||| ||||    
T  2587 ctttgaatattgtgagaatttaattacaattcacaattcaattgg 2543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #3
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 193 - 907
Target Start/End: Complemental strand, 11633 - 10919
Alignment:
Q  193 atgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatcgtttcaattttgtaaga 292  Q
    |||||||| |||||||||||| | | ||||||||||||||| ||||| ||||||||||| |||| |||||| |||||||| ||||||  || ||||   |    
T  11633 atgaaagtcttgacattggacaagtgtgaatatttaacccatatacctgatgtctcaggtcttcaaaatttggaaaagttctcgtttgcatattgtcgta 11534  T
Q  293 atttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagttttccacctttacaact 392  Q
    | ||||||||||||||||||||| ||||   |||       |||||||   || |||||     ||||| ||| ||| | |||||||||||||||    |    
T  11533 aattaattacaattcacaattcaattggacacctaaataaacttgaaaggttaaatgcatttgattgcagcaaactcgaaagttttccacctttagggtt 11434  T
Q  393 accctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattataaagattttatgttgcac 492  Q
      | |  ||| |  ||||| | |||| | | |||| ||||||||||||||||||| |||||||||||||||||| ||||  |||| |  ||  ||||||     
T  11433 ggcatcccttaatgaattgaatctctctcattgtgggagtctcaagagttttccaaaattattatgcaagatgacaaatattaaaaagatttggttgcag 11334  T
Q  493 gaaacttgcataggagaattgccattttcatttcaaaatctcagtgaacttgatcgcttagaaataattggctgtcgaatgctcaggttcccaaaacata 592  Q
     | |||| |||| |||||||||||| ||||||||||||||||||||||||| ||   |||  | ||   |    | ||||||| |||||||||||||| |    
T  11333 aatacttccataagagaattgccatcttcatttcaaaatctcagtgaacttcatgagttaacagtacgggaagctggaatgctgaggttcccaaaacaga 11234  T
Q  593 atgataaaatcaattttatggtattttcaaatgtgcaccatcttagaa-ttgaaaagagcaacctctcagatgaatttctccaaatacttttgatgtggt 691  Q
    ||||| ||||  ||| ||| || |||||||| ||| || |   ||||| |  | ||  |||| ||||||||||||| ||||| |||| || | | |||||    
T  11233 atgatcaaatgtattctatagtgttttcaaaagtg-acaaaactagaactctataattgcaagctctcagatgaatgtctcccaatatttctcaagtggt 11135  T
Q  692 gtgttagtgtggaaaatctatacttatctaagacaaatttcaaaactcttcccgagtgccttagtgaatgtcaccttcttaaatgcattaatgtggatgg 791  Q
    |||||  ||||  | ||||| |||||||   ||  |||||||||  | |||| |||||||||||||||||| ||||||||    || |||   |||||      
T  11134 gtgtttatgtgacatatctagacttatcatggaacaatttcaaacttattcctgagtgccttagtgaatgttaccttctttctagccttagattggataa 11035  T
Q  792 ctgcaagtttcttgaggaaattacagggtttccaccaaatcttgaaagatttcacgcagaggaatgttattcattgagttcctcaagtagacgattgtta 891  Q
    |||||||| ||| |||||||||| |||| ||||||||||||||| |||  ||   |||   | |||  | |||||||||||||||||||||  | || ||    
T  11034 ctgcaagtctctggaggaaattagagggattccaccaaatcttgcaaggctttctgcaatcggatgcaaatcattgagttcctcaagtagaaaaatgcta 10935  T
Q  892 ttgagtcaggtttgtt 907  Q
    ||||||||||||||||    
T  10934 ttgagtcaggtttgtt 10919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #4
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 961 - 1015
Target Start/End: Complemental strand, 10885 - 10831
Alignment:
Q  961 aatcgataatgtaatacatcttattctaaactaacaggagctacacgaggctgga 1015  Q
    |||||||||||||| | |||||||||||||||||||| ||||| | |||||||||    
T  10885 aatcgataatgtaacatatcttattctaaactaacagaagctaaatgaggctgga 10831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1870 (Bit Score: 65; Significance: 7e-28; HSPs: 2)
Name: scaffold1870
Description:

Target: scaffold1870; HSP #1
Raw Score: 65; E-Value: 7e-28
Query Start/End: Original strand, 176 - 320
Target Start/End: Original strand, 980 - 1124
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||||||||| |  | |||||| | ||||||||||||   | ||||||||||||||| ||||| ||||||||||| |||| ||||||||||||||| ||    
T  980 tgcagaagttccagaacatgaaaatcttgacattggacaggtgtgaatatttaacccatatacctgatgtctcaggtcttcaaaatttagaaaagttctc 1079  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattcagttgg 320  Q
     ||| ||| |||| |||||||||||||||||||||||||| ||||    
T  1080 ctttgaatattgtgagaatttaattacaattcacaattcaattgg 1124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1870; HSP #2
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 424 - 471
Target Start/End: Original strand, 1228 - 1275
Alignment:
Q  424 tgtgagagtctcaagagttttccagaattattatgcaagatgaaaaat 471  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||    
T  1228 tgtgagagtctcaagagttttccaaaattattatgcaagatgacaaat 1275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 63; Significance: 1e-26; HSPs: 3)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 176 - 314
Target Start/End: Original strand, 15449 - 15587
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||||||||| |  |||||||||| |||| ||||||||  | | |||||||||| || ||||||||||||||||| ||| |||||||||||||||||||    
T  15449 tgcagaagttccaggatatgaaagtcttgatattggaccgatgtaaatatttaacacatatacccgatgtctcaggcctttcaaatttagaaaagttatc 15548  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattc 314  Q
    |||| ||   ||| | |||||||||||||||||||||||    
T  15549 gtttgaaagatgttataatttaattacaattcacaattc 15587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 429 - 543
Target Start/End: Original strand, 15702 - 15816
Alignment:
Q  429 gagtctcaagagttttccagaattattatgcaagatgaaaaattata-aagattttatgttgcacgaaacttgcataggagaattgccattttcatttca 527  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||| |  || ||  ||||    | |||| |||||||||| ||||||||||||||||    
T  15702 gagtctcaagagttttccagaattattatgcaagatgacaaa-tatagacaatatttggttgtgtaatacttccataggagaactgccattttcatttca 15800  T
Q  528 aaatctcagtgaactt 543  Q
    |||||| |||||||||    
T  15801 aaatcttagtgaactt 15816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 727 - 918
Target Start/End: Original strand, 15997 - 16187
Alignment:
Q  727 aatttcaaaactcttcccgagtgccttagtgaatgtcaccttcttaaatgcattaatgtggatggctgcaagtttcttgaggaaattacagggtttccac 826  Q
    |||||||||| |||||| |||||||||||||||||||||| ||||      ||||||||||    |||| |||  ||||||||||||| |||| ||||||    
T  15997 aatttcaaaattcttcctgagtgccttagtgaatgtcaccatcttgttgaaattaatgtggggtactgcgagtcccttgaggaaattagagggattccac 16096  T
Q  827 caaatcttgaaaga-tttcacgcagaggaatgttattcattgagttcctcaagtagacgattgttattgagtcaggtttgtttgttgttttat 918  Q
    |||||| | |||||  || | ||| | | |||| | ||||||||||||||||||| | || | ||| ||||||||||| | ||||||||||||    
T  16097 caaatc-taaaagagattaatgcacaaggatgtcaatcattgagttcctcaagtaaaagaatattaatgagtcaggttag-ttgttgttttat 16187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 2e-25; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 727 - 907
Target Start/End: Original strand, 22023991 - 22024171
Alignment:
Q  727 aatttcaaaactcttcccgagtgccttagtgaatgtcaccttcttaaatgcattaatgtggatggctgcaagtttcttgaggaaattacagggtttccac 826  Q
    |||||||||| ||||||||||||||||| ||||||||||||| ||       ||||| ||||| ||||||| | | |||||||||||| |||| ||||||    
T  22023991 aatttcaaaattcttcccgagtgccttaatgaatgtcaccttgtttgggttcttaatttggatcgctgcaaatctgttgaggaaattagagggattccac 22024090  T
Q  827 caaatcttgaaagatttcacgcagaggaatgttattcattgagttcctcaagtagacgattgttattgagtcaggtttgtt 907  Q
    |||||||||||||  ||   |||   |||||  | ||||||||||||||||||||| || |||||||||||||||||||||    
T  22024091 caaatcttgaaaggctttctgcaatagaatgcaaatcattgagttcctcaagtagaagaatgttattgagtcaggtttgtt 22024171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 176 - 314
Target Start/End: Original strand, 22023440 - 22023578
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||||||||| |  |||||||||| ||||| |   |||||| ||||||||| ||| | ||||   |||||||||| |||||||||||||||||||||||    
T  22023440 tgcagaagttccagaatatgaaagtcttgacgtcataccattgtgaatattttacctatatacgtaatgtctcaggtcttccaaatttagaaaagttatc 22023539  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattc 314  Q
    |||| ||  |||||||||||||||||||||| |||||||    
T  22023540 gtttgaaaattgtaagaatttaattacaattgacaattc 22023578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 191 - 314
Target Start/End: Complemental strand, 29271820 - 29271697
Alignment:
Q  191 atatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatcgtttcaattttgtaa 290  Q
    |||||||||| |||| ||||||||  | |||||| ||||| || || |||||||||||||| ||| ||||||||||||||||||||||| ||  |||| |    
T  29271820 atatgaaagtcttgatattggaccgatgtgaatacttaacacatatccccgatgtctcaggcctttcaaatttagaaaagttatcgtttgaaaattgtga 29271721  T
Q  291 gaatttaattacaattcacaattc 314  Q
     ||||||| |||||||||||||||    
T  29271720 taatttaactacaattcacaattc 29271697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 424 - 543
Target Start/End: Complemental strand, 29271587 - 29271468
Alignment:
Q  424 tgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattata-aagattttatgttgcacgaaacttgcataggagaattgccattttca 522  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||| |||| |  || || |||||||  | |||| ||| | |||| | |||||||||    
T  29271587 tgtgtgagtctcgatagttttccagaattattatgcaagatgaaaaa-tatagacaatattttgttgcatcatactttcattgcagaacttccattttca 29271489  T
Q  523 tttcaaaatctcagtgaactt 543  Q
    |||||||||||||||||||||    
T  29271488 tttcaaaatctcagtgaactt 29271468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 404 - 549
Target Start/End: Original strand, 22023671 - 22023814
Alignment:
Q  404 agaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattata-aagattttatgttgcacgaaacttgca 502  Q
    |||||||||||||||  ||||||  |||||||  |||||||||| |||||||||||||||||||||| |||| || || ||  |||| |  | |||| ||    
T  22023671 agaaattggaactctccaagtgtaggagtctc--gagttttccaaaattattatgcaagatgaaaaa-tatagaatatatttcgttgtataatacttcca 22023767  T
Q  503 taggagaattgccattttcatttcaaaatctcagtgaacttgatcgc 549  Q
    || |||||||||||| ||| ||||||||||||||| ||||| |||||    
T  22023768 taagagaattgccatcttcttttcaaaatctcagtaaactttatcgc 22023814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 656 - 833
Target Start/End: Complemental strand, 29271358 - 29271181
Alignment:
Q  656 tctcagatgaatttctccaaatacttttgatgtggtgtgttagtgtggaaaatctatacttatctaagacaaatttcaaaactcttcccgagtgccttag 755  Q
    |||||||||||| ||||| ||||||| | | ||||||||||| ||||  | ||||| |||||||    |   ||||||||| |||||| |||||||||||    
T  29271358 tctcagatgaatgtctcccaatacttctcaagtggtgtgttaatgtgacatatctagacttatcatttaactatttcaaaattcttcctgagtgccttag 29271259  T
Q  756 tgaatgtcaccttcttaaatgcattaatgtggatggctgcaagtttcttgaggaaattacagggtttccaccaaatct 833  Q
    |||||||| || |||| |    |||||| ||  ||||||| | | |||| ||||||||| |||| |||||||||||||    
T  29271258 tgaatgtctccatctttataaaattaatatgagtggctgccattctcttaaggaaattagagggattccaccaaatct 29271181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 22023273 - 22023343
Alignment:
Q  54 agtctctatcatcttgtattttgaataaggcaagtgaaataagttcagttttcaattgtgcatatttataa 124  Q
    |||||||||||||| |||||||||  |||||||||||||||| |||| |||  ||||||  ||||||||||    
T  22023273 agtctctatcatctagtattttgagcaaggcaagtgaaataacttcactttctaattgtatatatttataa 22023343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 1e-19; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 176 - 538
Target Start/End: Complemental strand, 17991215 - 17990853
Alignment:
Q  176 tgcagaagttcaactatatgaaagtattgacattggaccattctgaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatc 275  Q
    ||||||||||| |  |||||||||| ||||||||  ||| || | |||||||||   ||||||||||||||||||| |||| ||  ||| || |||| ||    
T  17991215 tgcagaagttcgagaatatgaaagtcttgacatttaaccgttgtcaatatttaatgaaaatacccgatgtctcaggtcttcaaagcttaaaagagttctc 17991116  T
Q  276 gtttcaattttgtaagaatttaattacaattcacaattcagttgggttcctnnnnnnncttgaaatcatagatgcaggcttttgcatcaagctccagagt 375  Q
     ||| ||   ||||| |||||||||||||||||| ||||  |||||| |||       ||||||||| || |||||     ||| | ||||||| |||||    
T  17991115 atttgaagagtgtaataatttaattacaattcacgattcgattgggtacctaaataaacttgaaatcttaaatgcacagggttgtagcaagctcgagagt 17991016  T
Q  376 tttccacctttacaactaccctgtcttgagaaattggaactctataagtgtgagagtctcaagagttttccagaattattatgcaagatgaaaaattata 475  Q
    ||||| || |||||  |  | | |||| ||||||||||||| | ||  |||  ||  || ||||||||||||||||||||||||||||||| |||  |||    
T  17991015 tttcctcccttacagttggcatctcttaagaaattggaactatctagatgtaggaacctaaagagttttccagaattattatgcaagatgacaaag-ata 17990917  T
Q  476 -aagattttatgttgcacgaaacttgcataggagaattgccattttcatttcaaaatctcagtg 538  Q
     || || ||  ||||   || | || ||||||||||||||||||||||||||||||||||||||    
T  17990916 gaacatatttggttggcagatagttccataggagaattgccattttcatttcaaaatctcagtg 17990853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 17991370 - 17991277
Alignment:
Q  31 gaaatggaatggttgtcctttgaagtctctatcatcttgtattttgaataaggcaagtgaaataagttcagttttcaattgtgcatatttataa 124  Q
    ||||||||| || |||||||  |||||||||||||||||| ||| |||||||||||||||||||| |||| |||  ||||||| ||||||||||    
T  17991370 gaaatggaaaggatgtccttcaaagtctctatcatcttgtttttcgaataaggcaagtgaaataatttcattttggaattgtgtatatttataa 17991277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 31; Significance: 0.0000001; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 326
Target Start/End: Original strand, 38760 - 38830
Alignment:
Q  256 ccaaatttagaaaagttatcgtttcaattttgtaagaatttaattacaattcacaattcagttgggttcct 326  Q
    |||||||||||||  || || |||||||  |||||||||||||||  ||||||||| || |||||||||||    
T  38760 ccaaatttagaaatattttcatttcaatactgtaagaatttaattgaaattcacaaatctgttgggttcct 38830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 326
Target Start/End: Original strand, 45738 - 45808
Alignment:
Q  256 ccaaatttagaaaagttatcgtttcaattttgtaagaatttaattacaattcacaattcagttgggttcct 326  Q
    |||||||||||||  || || ||||||||||||||||||||||||  ||||||  | || |||||||||||    
T  45738 ccaaatttagaaatattttcatttcaattttgtaagaatttaattgaaattcatgaatctgttgggttcct 45808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University