View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2660_high_23 (Length: 303)
Name: NF2660_high_23
Description: NF2660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2660_high_23 |
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Alignment Details
Target: chr4 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 32382715 - 32383015
Alignment:
| Q |
1 |
agaacatttacatgatggttcaatgatttgtcatgttatatacatatgtgtaagtgtttattaaccattcaaactctccgttaacctctctaacttacca |
100 |
Q |
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| T |
32382715 |
agaacatttacatgatggttcaatgatttgtcatgttatatacatatgtgtaagtgtttattaaccattcaaactctccgttaacctctctaacttacca |
32382814 |
T |
|
| Q |
101 |
ttgattatgatccttagattgcgtgcttcctcttacatgttacctattaatgtgttaaacccattcaccatgtctatagttagaatgttaacatttgaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32382815 |
ttgattatgatccttagattgcgtgcttcctctttcatgttacctattaatgtgttaaacccattcaccatgtctatagttagaatgttaacatttgaat |
32382914 |
T |
|
| Q |
201 |
aaaacaataaaactaaccatcagatccattcatggccaatcagtccctacgcttttaccaccaaagaaattgtattttgttatagtatattcttcgacat |
300 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || || ||||| |
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| T |
32382915 |
aaaacaacaaaactaaccatcagatccattcatggccaatcagtccctacgcttttaccgccaaagaaattgtattttgttatagtatttttttagacat |
32383014 |
T |
|
| Q |
301 |
c |
301 |
Q |
| |
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| |
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|
| T |
32383015 |
c |
32383015 |
T |
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