View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2660_high_38 (Length: 238)
Name: NF2660_high_38
Description: NF2660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2660_high_38 |
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Alignment Details
Target: chr1 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 38 - 226
Target Start/End: Original strand, 1203913 - 1204100
Alignment:
| Q |
38 |
cttaatcctcaccattctgttattcatcaatacaacaacatcatcaaagtcaaaccaatgtggtcccacaacaaaccgggacccacaaaacatccaacac |
137 |
Q |
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| T |
1203913 |
cttaatcctcaccattctgttattcatcaatacaacaacatcatcaaagtcaaaccaatgtggtcccacaacaaaccgggacccacaaa-catccaacat |
1204011 |
T |
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| Q |
138 |
aacaaaatcaccgtacttattaacggtttctccgaatcacgaatcaacatcctccaatcaaacgccgccacgtacgcactctctccctt |
226 |
Q |
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| T |
1204012 |
aacaaaatcaccgtacttattaacggtttctccgaatcacgaatctccatcctccaatcaaacgccgccacgtacgcactctctccctt |
1204100 |
T |
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