View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2660_low_11 (Length: 569)
Name: NF2660_low_11
Description: NF2660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2660_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 526; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 526; E-Value: 0
Query Start/End: Original strand, 6 - 554
Target Start/End: Original strand, 32360266 - 32360815
Alignment:
| Q |
6 |
catccatctgtattgcctgtgcttttgctcttataattgggttgatatttatatacccattatattcccttcttaatataagtttctttgcttcaagaaa |
105 |
Q |
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| T |
32360266 |
catccatctgtattgcctgtgcttttgctcttataattgggttgatatttatatacccattatattcccttcttaatataagtttctttgcttcaagaaa |
32360365 |
T |
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| Q |
106 |
aaagcacatatgatgtcacatacatagattgtctctgaattttgacattgaaataacacaactcatttcatatatacaatcaatactacaattacacagt |
205 |
Q |
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| T |
32360366 |
aaagcacatatgatgtcacatacatagattgtctctgaattttgacattaaaataacacaactcatttcatatatacaatcaatactacaattacacagt |
32360465 |
T |
|
| Q |
206 |
gacaac-gttgtaagcttcaatagcgaaggcaatacgaaggtttttcaatttctcctagtagacacccttttgataatcaggctaacagaaagctcctcc |
304 |
Q |
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|||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
32360466 |
gacaactgttgtaagcttcaatagcgaaggcaatactaaggtttttcaatttcttctagtagacacccttttgataatcaggctcacagaaagctcctcc |
32360565 |
T |
|
| Q |
305 |
aagatcatcacaagcctctgcttggaaaaccctgaaaaacacatcatcatccatttaacattacaattctgatttcatatttcaacattcaatagtgaag |
404 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32360566 |
aagatcatcacaagcctctgcttggaaaaccctgaaaaacacatcatcatccatttaacattacaattctgatttcatatttcaacattcaatagtgaag |
32360665 |
T |
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| Q |
405 |
ctaatgaaagtagtaattaaattttactatagcgaaatcatacgtcttaggctcattgtaatcaagatattccctctcaatgttccctgaagctgcagtc |
504 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32360666 |
ctaatgaaagtagtaattaaattttactatagcgaaatcatacgtcttaggctcattgtaatcaagatattccctctcaatgttccctgaagctgcagtc |
32360765 |
T |
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| Q |
505 |
tttggtgtatcattccttgcttcaggctgcagcttgacttcaggattcat |
554 |
Q |
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| T |
32360766 |
tttggtgtatcattccttgcttcaggctgcagcttgacttcaggattcat |
32360815 |
T |
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