View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2660_low_31 (Length: 302)

Name: NF2660_low_31
Description: NF2660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2660_low_31
NF2660_low_31
[»] chr7 (25 HSPs)
chr7 (44-287)||(11665234-11665475)
chr7 (44-126)||(24339666-24339748)
chr7 (44-126)||(26033414-26033496)
chr7 (44-126)||(2334274-2334355)
chr7 (44-160)||(5409763-5409871)
chr7 (44-126)||(21560527-21560609)
chr7 (44-151)||(32093955-32094055)
chr7 (44-126)||(9778524-9778600)
chr7 (44-126)||(9408287-9408369)
chr7 (48-94)||(11272571-11272617)
chr7 (46-126)||(13770717-13770791)
chr7 (79-151)||(15680857-15680927)
chr7 (87-151)||(17852056-17852118)
chr7 (46-126)||(4794915-4794995)
chr7 (46-126)||(6028651-6028731)
chr7 (44-88)||(18039023-18039067)
chr7 (50-110)||(25822685-25822745)
chr7 (44-151)||(32308144-32308249)
chr7 (44-126)||(6630865-6630947)
chr7 (84-126)||(8234199-8234241)
chr7 (79-151)||(598256-598326)
chr7 (79-151)||(32287404-32287474)
chr7 (46-94)||(1885599-1885647)
chr7 (44-80)||(3991348-3991384)
chr7 (46-82)||(27945067-27945103)
[»] chr3 (16 HSPs)
chr3 (48-126)||(15796247-15796325)
chr3 (44-126)||(4987244-4987326)
chr3 (44-151)||(34185053-34185158)
chr3 (44-151)||(41961580-41961685)
chr3 (44-110)||(14209137-14209203)
chr3 (44-126)||(14832123-14832205)
chr3 (48-126)||(8039788-8039866)
chr3 (79-151)||(55401123-55401193)
chr3 (44-100)||(34910341-34910397)
chr3 (44-126)||(28812539-28812621)
chr3 (44-126)||(55212987-55213068)
chr3 (44-107)||(750590-750653)
chr3 (79-126)||(7171549-7171596)
chr3 (48-111)||(16789040-16789103)
chr3 (44-81)||(28918025-28918062)
chr3 (44-151)||(49651717-49651821)
[»] chr5 (12 HSPs)
chr5 (46-126)||(21522776-21522856)
chr5 (46-126)||(21533342-21533422)
chr5 (46-122)||(21542056-21542132)
chr5 (44-151)||(39698565-39698670)
chr5 (44-126)||(7677729-7677811)
chr5 (44-126)||(30183573-30183655)
chr5 (48-126)||(15382507-15382580)
chr5 (44-126)||(19579725-19579807)
chr5 (44-94)||(21351890-21351940)
chr5 (69-111)||(36642730-36642772)
chr5 (44-94)||(37328829-37328879)
chr5 (44-105)||(21814285-21814346)
[»] chr6 (19 HSPs)
chr6 (44-126)||(16766721-16766803)
chr6 (44-126)||(9522915-9522997)
chr6 (44-126)||(8365472-8365554)
chr6 (44-126)||(31384944-31385025)
chr6 (44-110)||(5970077-5970143)
chr6 (44-110)||(8714004-8714070)
chr6 (44-126)||(9107323-9107405)
chr6 (46-121)||(25038029-25038104)
chr6 (79-151)||(28152146-28152216)
chr6 (79-126)||(33001253-33001300)
chr6 (44-82)||(9911525-9911563)
chr6 (44-82)||(10770671-10770709)
chr6 (79-151)||(6898222-6898292)
chr6 (79-151)||(7977771-7977841)
chr6 (44-105)||(16488564-16488625)
chr6 (79-151)||(28715343-28715413)
chr6 (46-106)||(9195727-9195787)
chr6 (84-151)||(17841530-17841595)
chr6 (46-94)||(21395293-21395341)
[»] chr2 (18 HSPs)
chr2 (48-151)||(35056896-35056997)
chr2 (46-151)||(11223794-11223896)
chr2 (44-124)||(15657888-15657968)
chr2 (44-151)||(37419767-37419872)
chr2 (46-126)||(36756297-36756377)
chr2 (44-111)||(30717498-30717565)
chr2 (44-126)||(28524450-28524532)
chr2 (67-120)||(4207903-4207956)
chr2 (59-151)||(26769550-26769640)
chr2 (47-151)||(44860347-44860449)
chr2 (44-111)||(32749793-32749860)
chr2 (44-111)||(36096343-36096410)
chr2 (84-126)||(27084322-27084364)
chr2 (59-108)||(34337152-34337201)
chr2 (79-151)||(37559025-37559095)
chr2 (79-150)||(2438661-2438730)
chr2 (44-88)||(23058433-23058477)
chr2 (44-151)||(34784912-34785017)
[»] scaffold0136 (1 HSPs)
scaffold0136 (44-126)||(3802-3884)
[»] scaffold0044 (1 HSPs)
scaffold0044 (44-113)||(53204-53273)
[»] scaffold0003 (1 HSPs)
scaffold0003 (44-151)||(241618-241723)
[»] chr8 (18 HSPs)
chr8 (44-151)||(22652000-22652105)
chr8 (44-156)||(29510229-29510339)
chr8 (44-151)||(15816059-15816164)
chr8 (44-113)||(2572022-2572091)
chr8 (44-126)||(22197695-22197777)
chr8 (44-126)||(8343340-8343422)
chr8 (44-114)||(28745522-28745592)
chr8 (44-126)||(29447063-29447145)
chr8 (44-89)||(25566865-25566910)
chr8 (44-151)||(11944689-11944794)
chr8 (79-126)||(5813640-5813687)
chr8 (44-126)||(11927039-11927121)
chr8 (59-151)||(21465451-21465541)
chr8 (44-105)||(26902149-26902210)
chr8 (44-113)||(29447468-29447537)
chr8 (50-126)||(4673378-4673454)
chr8 (44-115)||(24362165-24362237)
chr8 (46-149)||(24727684-24727785)
[»] chr1 (24 HSPs)
chr1 (44-151)||(31694640-31694745)
chr1 (44-151)||(47989521-47989626)
chr1 (44-126)||(6427488-6427570)
chr1 (44-151)||(5944307-5944412)
chr1 (46-126)||(6612124-6612204)
chr1 (50-126)||(40917779-40917855)
chr1 (59-126)||(21032245-21032312)
chr1 (44-151)||(9828068-9828173)
chr1 (44-126)||(1486668-1486744)
chr1 (44-106)||(34371737-34371799)
chr1 (48-113)||(9629866-9629931)
chr1 (44-119)||(25361910-25361983)
chr1 (44-100)||(44482254-44482310)
chr1 (79-123)||(46348350-46348394)
chr1 (46-109)||(30173732-30173795)
chr1 (79-126)||(51410073-51410120)
chr1 (44-90)||(6332694-6332740)
chr1 (44-82)||(24577183-24577221)
chr1 (44-126)||(32461417-32461498)
chr1 (85-126)||(15323222-15323263)
chr1 (79-151)||(22515828-22515898)
chr1 (46-94)||(5376485-5376533)
chr1 (45-113)||(27471532-27471600)
chr1 (100-151)||(46940749-46940798)
[»] chr4 (15 HSPs)
chr4 (44-126)||(30982831-30982913)
chr4 (44-151)||(19482692-19482797)
chr4 (44-126)||(19312359-19312441)
chr4 (79-151)||(34306745-34306815)
chr4 (70-126)||(15724507-15724563)
chr4 (44-112)||(22234857-22234925)
chr4 (79-126)||(21945551-21945598)
chr4 (79-151)||(23292927-23292997)
chr4 (48-125)||(30838238-30838315)
chr4 (46-126)||(847977-848057)
chr4 (44-112)||(24613668-24613736)
chr4 (44-124)||(38148680-38148760)
chr4 (44-126)||(27706130-27706212)
chr4 (44-89)||(4383391-4383436)
chr4 (59-119)||(53490724-53490784)
[»] scaffold0450 (1 HSPs)
scaffold0450 (44-151)||(8565-8670)
[»] scaffold0086 (1 HSPs)
scaffold0086 (44-126)||(2952-3034)
[»] scaffold0019 (1 HSPs)
scaffold0019 (44-126)||(71749-71831)
[»] scaffold0008 (1 HSPs)
scaffold0008 (45-126)||(263325-263406)
[»] scaffold0053 (1 HSPs)
scaffold0053 (79-126)||(8846-8893)
[»] scaffold0361 (1 HSPs)
scaffold0361 (84-126)||(14580-14622)
[»] scaffold0123 (1 HSPs)
scaffold0123 (44-111)||(44493-44560)
[»] scaffold0025 (1 HSPs)
scaffold0025 (44-82)||(23794-23832)
[»] scaffold0171 (1 HSPs)
scaffold0171 (44-108)||(23535-23599)


Alignment Details
Target: chr7 (Bit Score: 149; Significance: 1e-78; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 44 - 287
Target Start/End: Complemental strand, 11665475 - 11665234
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgt 143  Q
    ||||||||||||||||||||| || ||||| |||| ||| ||||||| ||| ||||||||||||||||||||||||  ||||||  |||| | ||| |||    
T  11665475 tcacataattcagtctaattataagtgtcgatgtcatgtcggtgtcgaacacgacacgtgtccgacaccgaaacacatctaata--cgaggaatgtccgt 11665378  T
Q  144 gcttcatatgttactaacaaagttccnnnnnnnnttgtcttgattctaacatgagacttttctatttttggcttgttttaggctagaataagactctcat 243  Q
    |||||||| ||||||||||||||| |        ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11665377 gcttcatacgttactaacaaagttgcaaaaaaaattgacttgattctaacatgagacttttctatttttggcttgttttaggctagaataagactctcat 11665278  T
Q  244 ctattatcaatgatattataatagagaggcgtaaagttaatatt 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  11665277 ctattatcaatgatattataatagagaggcgtaaagttaatatt 11665234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 24339666 - 24339748
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||||||| ||||||| ||||||||||  |||||||||||    
T  24339666 tcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaat 24339748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 26033496 - 26033414
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||||||| ||||||||| ||||||| |||||| |||||| |||||||||||||||||| ||||  |||| ||||||    
T  26033496 tcacataattcagtgtaattacaagtgtcggtctcgtgtcggtgtcagacatgacacgtgtccgataccgcgacacacctaat 26033414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 2334274 - 2334355
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||| ||| ||||||||| ||||||||||||||  |||||||||| ||||| |||||||||| |||||||| |||||    
T  2334274 tcacataatttagtgtaattacaagtgtcggtgtcgtgt-cgtgtcggacacgacacatgtccgacactgaaacacgtctaat 2334355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 160
Target Start/End: Complemental strand, 5409871 - 5409763
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgt 143  Q
    ||||||||||||||  |||||||| ||||||||||||||      |||||| ||||||||||||||||||  |||||||||  || |||| ||||| |||    
T  5409871 tcacataattcagtgcaattacaagtgtcggtgtcgtgt------cggacacgacacgtgtccgacaccgggacacgccta--atccgaggagtgtccgt 5409780  T
Q  144 gcttcatatgttactaa 160  Q
    |||||||| ||| ||||    
T  5409779 gcttcataggttcctaa 5409763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 21560527 - 21560609
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||||||| ||||||||| |||||||||||| | ||||||  ||| || || ||||  |||||||||||||||||||    
T  21560527 tcacataattcagtgtaattacaagtgtcggtgtcgtatcggtgtcaaacacgatacatgtctaacaccgaaacacgcctaat 21560609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 32094055 - 32093955
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacacc-gaaacacgcctaatatacgagcagtgttcg 142  Q
    |||||||||||||| ||||||||| ||||||||||      |||||||||| ||||||||||||||||| |  |||||||||  || |||| ||||||||    
T  32094055 tcacataattcagtgtaattacaaatgtcggtgtc------gtgtcggacacgacacgtgtccgacaccggggacacgccta--atccgaggagtgttcg 32093964  T
Q  143 tgcttcata 151  Q
    |||||||||    
T  32093963 tgcttcata 32093955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 9778524 - 9778600
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||||||| ||||||||| ||||||||||      ||||||||||  |||||||||||||||||  |||||||||||    
T  9778524 tcacataattcagtataattacaagtgtcggtgtc------gtgtcggacacaacacgtgtccgacaccgggacacgcctaat 9778600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 9408369 - 9408287
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||| ||| ||||||||| |||||||||||| | |||||| |||| || |  | ||||||||| |||||||||||||    
T  9408369 tcacataatttagtgtaattacaagtgtcggtgtcgtatcggtgtcagacacgatatatatccgacaccaaaacacgcctaat 9408287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 11272617 - 11272571
Alignment:
Q  48 ataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggaca 94  Q
    |||||||||| ||||||||| |||||||||||||| |||||||||||    
T  11272617 ataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggaca 11272571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 13770717 - 13770791
Alignment:
Q  46 acataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||||| ||||||||| ||||| ||||||||      ||||||  ||||||||||||||||| ||||||||||||    
T  13770717 acataattcagtgtaattacaagtgtcgttgtcgtgt------cggacacaacacgtgtccgacaccggaacacgcctaat 13770791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 151
Target Start/End: Original strand, 15680857 - 15680927
Alignment:
Q  79 gtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgtgcttcata 151  Q
    |||| ||||||||||| ||||||||||||||||||| ||||| |||  || |||| ||||| |||||||||||    
T  15680857 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgtcta--attcgaggagtgtccgtgcttcata 15680927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 17852056 - 17852118
Alignment:
Q  87 gtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgtgcttcata 151  Q
    |||||||||||||||||||||||||||| |||| ||||  || |||| ||||| |||||||||||    
T  17852056 gtcggacatgacacgtgtccgacaccgagacacaccta--attcgaggagtgtccgtgcttcata 17852118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 4794915 - 4794995
Alignment:
Q  46 acataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||||| |||||| || |||||||  ||| | ||||||||||| ||||||| || |||||| ||||||| |||||    
T  4794915 acataattcagtgtaattataagtgtcggtaccgtatcggtgtcggacacgacacgtatctgacacctaaacacgtctaat 4794995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 6028651 - 6028731
Alignment:
Q  46 acataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||| | | ||||||||| ||||||||||||||  |||||| ||| |||||| || |||||| || |||||||||||    
T  6028651 acataatttaatgtaattacaaatgtcggtgtcgtgtcagtgtcgaacacgacacgagttcgacactgagacacgcctaat 6028731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 18039023 - 18039067
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgt 88  Q
    |||||||||||||| ||||||||| |||||||||||||| |||||    
T  18039023 tcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgt 18039067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 25822685 - 25822745
Alignment:
Q  50 aattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgaca 110  Q
    |||||||| ||||||||| |||||||||||| | ||| ||||||| |||||||||| ||||    
T  25822685 aattcagtgtaattacaagtgtcggtgtcgtatcggtatcggacacgacacgtgtctgaca 25822745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 32308144 - 32308249
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgt 143  Q
    |||||||||||||| |||||  |  |||| ||||||||| ||||| ||||| ||||| ||||||||||||| ||||  |||  || |||| ||||||| |    
T  32308144 tcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacgacacatgtccgacaccgagacacagcta--atccgaggagtgttcat 32308241  T
Q  144 gcttcata 151  Q
    ||||||||    
T  32308242 gcttcata 32308249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 6630947 - 6630865
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||| ||||||||| |||||| |  ||||| |||||||| |||||||||||  ||||||| |||||||| | |||| ||||||    
T  6630947 tcacttaattcagtgtaattatatgtgtcgatgtcgtgttggtgtcggacacaacacgtgcccgacaccaagacacacctaat 6630865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 126
Target Start/End: Original strand, 8234199 - 8234241
Alignment:
Q  84 ggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    ||||||||||| ||||| ||||||||||||| |||||||||||    
T  8234199 ggtgtcggacacgacacatgtccgacaccgagacacgcctaat 8234241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 151
Target Start/End: Original strand, 598256 - 598326
Alignment:
Q  79 gtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgtgcttcata 151  Q
    |||| |||||| |||| ||||||||||||||||||  |||||||||  || |||| ||||| |||||||||||    
T  598256 gtgtcggtgtcagacacgacacgtgtccgacaccgggacacgccta--atccgagaagtgtccgtgcttcata 598326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 32287474 - 32287404
Alignment:
Q  79 gtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgtgcttcata 151  Q
    |||| |||||||||||||||| |||||||||||||  |||| ||||  || |||| ||||| |||||||||||    
T  32287474 gtgtcggtgtcggacatgacaagtgtccgacaccgggacacaccta--atccgaggagtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 1885599 - 1885647
Alignment:
Q  46 acataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggaca 94  Q
    |||||||||| | |||| |||| |||||||||||||| |||||||||||    
T  1885599 acataattcaatgtaatcacaagtgtcggtgtcgtgttggtgtcggaca 1885647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 80
Target Start/End: Original strand, 3991348 - 3991384
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgt 80  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  3991348 tcacataattcagtataattacaagtgtcggtgtcgt 3991384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 27945067 - 27945103
Alignment:
Q  46 acataattcagtctaattacaattgtcggtgtcgtgt 82  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  27945067 acataattcagtgtaattacaagtgtcggtgtcgtgt 27945103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 5e-25; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 15796325 - 15796247
Alignment:
Q  48 ataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||| |||||| ||||||||||||    
T  15796325 ataattcagtgtaattacaattgtcggtgtcgtgtaggtgtcggacacaacacgtgtccaacaccggaacacgcctaat 15796247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 4987326 - 4987244
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||||||| ||||||||| ||| |||| ||||| ||||| ||||| ||||||||||||||||||  |||||||||||    
T  4987326 tcacataattcagtgtaattacaagtgttggtgacgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaat 4987244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 34185158 - 34185053
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgt 143  Q
    ||||| |||||||| ||||||||| ||||||||||||||   ||||||||| |||| |||||||||||||  |||||||||  || |||| ||||| |||    
T  34185158 tcacacaattcagtgtaattacaagtgtcggtgtcgtgtccatgtcggacaagacatgtgtccgacaccgggacacgccta--atccgaggagtgtccgt 34185061  T
Q  144 gcttcata 151  Q
    ||||||||    
T  34185060 gcttcata 34185053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 41961685 - 41961580
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgt 143  Q
    |||||| |||| || ||||||||| |||||||||||||| ||| ||||||| |||||||||||||||| |  |||||||||  || |||| ||||| |||    
T  41961685 tcacattattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgccta--atccgagaagtgtccgt 41961588  T
Q  144 gcttcata 151  Q
    ||||||||    
T  41961587 gcttcata 41961580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 14209137 - 14209203
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgaca 110  Q
    |||||||||||||| ||||||||| |||| ||||||||| ||||||||||| ||||||||| |||||    
T  14209137 tcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacacgtgtacgaca 14209203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 14832123 - 14832205
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||| ||| | ||||||||| |||| ||||||||| ||| ||||||| ||||||||||||||||||  |||||||||||    
T  14832123 tcacataactcaatgtaattacaagtgtcagtgtcgtgtcggtatcggacacgacacgtgtccgacaccgggacacgcctaat 14832205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 8039866 - 8039788
Alignment:
Q  48 ataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||| |||||| |  |||||||||||||| |||||||||||||| || ||||||||||||  |||||| ||||    
T  8039866 ataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacatgagacatgtccgacaccgggacacgcttaat 8039788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 151
Target Start/End: Original strand, 55401123 - 55401193
Alignment:
Q  79 gtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgtgcttcata 151  Q
    |||| ||||||||||| ||||||||||||||||||| |||||||||  || |||| ||||| |||||||||||    
T  55401123 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgccta--atccgaggagtgtccgtgcttcata 55401193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 34910341 - 34910397
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacac 100  Q
    |||||||||||||| |||||||||  ||||||||||| | |||||||||||||||||    
T  34910341 tcacataattcagtgtaattacaagagtcggtgtcgtatcggtgtcggacatgacac 34910397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 28812539 - 28812621
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||||||| || |||||| |||||||||||||| |||||| |||| || || ||||||||| |   |||||||||||    
T  28812539 tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgtccgacagcaggacacgcctaat 28812621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 55212987 - 55213068
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||| |||  |||||||| ||||||||| |||| |||||||| ||  |||||||||||||||||| |||||| ||||    
T  55212987 tcacataatttagtgcaattacaagtgtcggtgt-gtgtcggtgtcgggcacaacacgtgtccgacaccgagacacgcataat 55213068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 750653 - 750590
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccg 107  Q
    |||||||||||  |  |||||||| |||||||||||||| ||| ||||||| ||||||||||||    
T  750653 tcacataattcgctgcaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccg 750590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 7171549 - 7171596
Alignment:
Q  79 gtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||| ||||||||||| ||||||||||||||||||  |||||||||||    
T  7171549 gtgttggtgtcggacacgacacgtgtccgacaccgcgacacgcctaat 7171596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 16789040 - 16789103
Alignment:
Q  48 ataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacac 111  Q
    |||||||||| |||||| || ||| ||||||||||  |||||||||||||||| ||||| ||||    
T  16789040 ataattcagtgtaattataagtgttggtgtcgtgtcagtgtcggacatgacacatgtccaacac 16789103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 28918025 - 28918062
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtg 81  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  28918025 tcacataattcagtgtaattacaagtgtcggtgtcgtg 28918062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 49651821 - 49651717
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgt 143  Q
    |||||||||||| | ||||||||| |||||||||||||| ||   |||||| ||||| | ||||||||||  |||| ||||  || |||| ||||| |||    
T  49651821 tcacataattcactgtaattacaagtgtcggtgtcgtgtcgg-accggacacgacacatatccgacaccgggacacaccta--atccgagaagtgtccgt 49651725  T
Q  144 gcttcata 151  Q
    ||||||||    
T  49651724 gcttcata 49651717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 8e-24; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 21522776 - 21522856
Alignment:
Q  46 acataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||| |||||  |||||||||||    
T  21522776 acataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaat 21522856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 21533342 - 21533422
Alignment:
Q  46 acataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||| |||||  |||||||||||    
T  21533342 acataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaat 21533422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 122
Target Start/End: Original strand, 21542056 - 21542132
Alignment:
Q  46 acataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcc 122  Q
    |||||||||||| ||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||  |||||||    
T  21542056 acataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcc 21542132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 39698565 - 39698670
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgt 143  Q
    |||||||||||||| ||||||||| |||| ||||||||| ||||||||||| |||| || ||||||||||| |||||||||  || |||| ||||| |||    
T  39698565 tcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacatgtatccgacaccgagacacgccta--atccgaggagtgtccgt 39698662  T
Q  144 gcttcata 151  Q
    ||||||||    
T  39698663 gcttcata 39698670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 7677729 - 7677811
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    ||||||||||||||  ||||| || |||||||||||||| |||||| |||| | ||| ||||||||||||  |||||||||||    
T  7677729 tcacataattcagtgcaattagaagtgtcggtgtcgtgtcggtgtctgacacgtcacatgtccgacaccgggacacgcctaat 7677811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 30183573 - 30183655
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||| |||| || ||||||||| |||||||||||||| ||| || |||| |||||||||||||||| |  |||||||||||    
T  30183573 tcacattattcggtttaattacaagtgtcggtgtcgtgttggtatcagacacgacacgtgtccgacactgggacacgcctaat 30183655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 15382507 - 15382580
Alignment:
Q  48 ataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||| ||||||||| ||||||||||     ||||| ||||| ||||| ||||||||||||  |||||||||||    
T  15382507 ataattcagtataattacaagtgtcggtgtc-----ggtgttggacacgacacatgtccgacaccgggacacgcctaat 15382580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 19579725 - 19579807
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||| |||  |||||||| ||||||||||||||  |||||||||| ||||  ||||  ||||||  |||||||||||    
T  19579725 tcacataatttagtgcaattacaagtgtcggtgtcgtgtcagtgtcggacacgacatatgtctaacaccgggacacgcctaat 19579807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 94
Target Start/End: Complemental strand, 21351940 - 21351890
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggaca 94  Q
    |||||||||||||| ||||||||| |||||||||| ||| |||||| ||||    
T  21351940 tcacataattcagtgtaattacaagtgtcggtgtcatgtcggtgtccgaca 21351890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 111
Target Start/End: Complemental strand, 36642772 - 36642730
Alignment:
Q  69 tgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacac 111  Q
    |||||||||| ||| ||||||||||| ||||||||||||||||    
T  36642772 tgtcggtgtcatgttggtgtcggacacgacacgtgtccgacac 36642730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 94
Target Start/End: Complemental strand, 37328879 - 37328829
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggaca 94  Q
    ||||| |||||||| ||||||||  |||||||||||||| |||||||||||    
T  37328879 tcacaaaattcagtgtaattacatgtgtcggtgtcgtgtcggtgtcggaca 37328829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 21814285 - 21814346
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtc 105  Q
    ||||| ||| |||| |||||| |  |||||||||||||| ||||||||||| ||||||||||    
T  21814285 tcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtc 21814346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 16766721 - 16766803
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||||||| ||||||||| |||||||||||||| |||||||||||  |||||||||||||||||  |||||||||||    
T  16766721 tcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgcctaat 16766803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 9522915 - 9522997
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||||||| ||||||||| ||||||||| |||| |||||||||   ||||||||||||||||||| |||||||||||    
T  9522915 tcacataattcagtgtaattacaagtgtcggtgttgtgtcggtgtcggatccgacacgtgtccgacaccgagacacgcctaat 9522997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 8365554 - 8365472
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    ||||||||||| || ||||||||| |||||||||||||| ||| ||||||| |||||||||||||||| |  |||||||||||    
T  8365554 tcacataattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaat 8365472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 31384944 - 31385025
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||||||| ||||||||| |||| |||||||||| |||| ||||| ||||||||||| ||||||  |||||||||||    
T  31384944 tcacataattcagtgtaattacaagtgtcagtgtcgtgta-gtgttggacacgacacgtgtcctacaccgggacacgcctaat 31385025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 5970143 - 5970077
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgaca 110  Q
    |||||||||||||| ||||||||| ||| |||||||||| ||||||||||| ||||| | |||||||    
T  5970143 tcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatttccgaca 5970077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 8714004 - 8714070
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgaca 110  Q
    |||||||||||||| ||||||||| ||| |||||||||| ||||||||||| ||||| | |||||||    
T  8714004 tcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatttccgaca 8714070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 9107405 - 9107323
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    ||||| |||||||| ||||||||| |||||||||||||| |||||||||||  ||  |||||||||||||  |||| ||||||    
T  9107405 tcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacgtgtgtccgacaccgggacacacctaat 9107323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 121
Target Start/End: Complemental strand, 25038104 - 25038029
Alignment:
Q  46 acataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgc 121  Q
    |||||||| ||| ||||||||| ||||||| | |||| |||||| |||| |||||||||||||||||  |||||||    
T  25038104 acataatttagtgtaattacaaatgtcggtattgtgttggtgtccgacacgacacgtgtccgacaccagaacacgc 25038029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 151
Target Start/End: Original strand, 28152146 - 28152216
Alignment:
Q  79 gtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgtgcttcata 151  Q
    |||| ||||||||||| ||||||||||||||||||  ||| |||||  || |||| |||||||||||||||||    
T  28152146 gtgtcggtgtcggacacgacacgtgtccgacaccgggacaggccta--atccgaggagtgttcgtgcttcata 28152216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 33001300 - 33001253
Alignment:
Q  79 gtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||| ||||||||||| |||||||||| |||||||||| |||||||||    
T  33001300 gtgtcggtgtcggacacgacacgtgtctgacaccgaaatacgcctaat 33001253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 9911563 - 9911525
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgt 82  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  9911563 tcacataattcagtgtaattacaagtgtcggtgtcgtgt 9911525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 10770709 - 10770671
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgt 82  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  10770709 tcacataattcagtgtaattacaagtgtcggtgtcgtgt 10770671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 6898292 - 6898222
Alignment:
Q  79 gtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgtgcttcata 151  Q
    |||| ||||||||||| ||  ||||||| |||||||||||||||||  || |||  |||||||||||||||||    
T  6898292 gtgtcggtgtcggacacgaagcgtgtccaacaccgaaacacgccta--atccgatgagtgttcgtgcttcata 6898222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 7977841 - 7977771
Alignment:
Q  79 gtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgtgcttcata 151  Q
    |||| |||||||||||  |||  ||||||||| ||||||||||||||| ||  || |||||||||||||||||    
T  7977841 gtgtcggtgtcggacacaacatatgtccgacaacgaaacacgcctaatcta--aggagtgttcgtgcttcata 7977771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 105
Target Start/End: Complemental strand, 16488625 - 16488564
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtc 105  Q
    ||||| ||| |||| |||||| |  |||||||||||||| ||||||||||| ||||||||||    
T  16488625 tcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtc 16488564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 151
Target Start/End: Original strand, 28715343 - 28715413
Alignment:
Q  79 gtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgtgcttcata 151  Q
    |||| ||||||||||| ||||||||| ||||||||  |||||||||  || |||| ||||| |||||||||||    
T  28715343 gtgtcggtgtcggacacgacacgtgttcgacaccgggacacgccta--attcgagaagtgtacgtgcttcata 28715413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 9195787 - 9195727
Alignment:
Q  46 acataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtcc 106  Q
    |||||||| ||| |||||| |  ||||||||||||||||||||| |||| |||| ||||||    
T  9195787 acataatttagtgtaattatatgtgtcggtgtcgtgtaggtgtctgacacgacatgtgtcc 9195727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 151
Target Start/End: Complemental strand, 17841595 - 17841530
Alignment:
Q  84 ggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgtgcttcata 151  Q
    ||||||||||| |||| ||||||||||| || |||||||||  || |||| ||||| |||||||||||    
T  17841595 ggtgtcggacacgacatgtgtccgacactgagacacgccta--atccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 21395341 - 21395293
Alignment:
Q  46 acataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggaca 94  Q
    |||||||| ||| ||||||||| ||||||||||||||  ||||||||||    
T  21395341 acataatttagtgtaattacaagtgtcggtgtcgtgtcagtgtcggaca 21395293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 151
Target Start/End: Original strand, 35056896 - 35056997
Alignment:
Q  48 ataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgtgctt 147  Q
    |||||||||| |||||| |  |||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||| |  ||| ||||| |||||||    
T  35056896 ataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacacggaaacacgcctaatct--gaggagtgtccgtgctt 35056993  T
Q  148 cata 151  Q
    ||||    
T  35056994 cata 35056997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 46 - 151
Target Start/End: Complemental strand, 11223896 - 11223794
Alignment:
Q  46 acataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgtgc 145  Q
    |||||||||||| ||||||||| |||||||||| ||||||||||||||| ||||| |||| |||||||  ||||||||||| |  ||| ||||| |||||    
T  11223896 acataattcagtgtaattacaagtgtcggtgtcatgtaggtgtcggacacgacac-tgtctgacaccgggacacgcctaatct--gaggagtgtccgtgc 11223800  T
Q  146 ttcata 151  Q
    ||||||    
T  11223799 ttcata 11223794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 15657888 - 15657968
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgccta 124  Q
    |||||||||||||| ||||||||| |||||||||||||| | ||||||||  |||||||||||||| |||  |||||||||    
T  15657888 tcacataattcagtgtaattacaaatgtcggtgtcgtgttgatgtcggacgcgacacgtgtccgacgccgggacacgccta 15657968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 37419767 - 37419872
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgt 143  Q
    ||||| |||||||| ||||||||| || ||||||||||| ||||||||||| ||  ||||||||||||||  |||||||||  || |||| ||||| |||    
T  37419767 tcacaaaattcagtgtaattacaagtgccggtgtcgtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgccta--atccgaggagtgtccgt 37419864  T
Q  144 gcttcata 151  Q
    ||||||||    
T  37419865 gcttcata 37419872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 36756377 - 36756297
Alignment:
Q  46 acataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||||| |||||| || ||||||||||||||  |||||| |||  |||| |||||||||||| ||||||||||||    
T  36756377 acataattcagtgtaattataagtgtcggtgtcgtgttagtgtcgaacacaacacatgtccgacaccgcaacacgcctaat 36756297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 30717565 - 30717498
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacac 111  Q
    |||||||||||||| ||||||||| ||||| |||||||| | ||||||||| ||||||||| ||||||    
T  30717565 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacgtgttcgacac 30717498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 28524450 - 28524532
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||||||| |||||| |  ||||| ||| |||| |||||||||||  ||||||||| ||||| ||||||||||||||    
T  28524450 tcacataattcagtgtaattatatgtgtcgttgttgtgttggtgtcggacacaacacgtgtctgacacagaaacacgcctaat 28524532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 4207903 - 4207956
Alignment:
Q  67 attgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacg 120  Q
    ||||||||| |||||| ||||||||||| ||||||||| |||||||||||||||    
T  4207903 attgtcggtatcgtgtcggtgtcggacacgacacgtgttcgacaccgaaacacg 4207956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 151
Target Start/End: Original strand, 26769550 - 26769640
Alignment:
Q  59 taattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgtgcttcata 151  Q
    ||||||||| |||||||||| ||| ||| ||||||| |||||||||||||||| |  |||||||||  || |||| ||||| |||||||||||    
T  26769550 taattacaagtgtcggtgtcatgtcggtatcggacacgacacgtgtccgacactgggacacgccta--atccgaggagtgtccgtgcttcata 26769640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 44860347 - 44860449
Alignment:
Q  47 cataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgtgct 146  Q
    ||||||||||| |||||| |  |||||||||||||| ||||| ||||| |||| |||||||||| ||  |||| ||||  || |||| ||||| ||||||    
T  44860347 cataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggacacgacatgtgtccgacatcgggacacaccta--attcgaggagtgtccgtgct 44860444  T
Q  147 tcata 151  Q
    |||||    
T  44860445 tcata 44860449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 32749860 - 32749793
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacac 111  Q
    |||||||||||||| |||| | || |||| ||||||||| | |||||||| ||||| |||||||||||    
T  32749860 tcacataattcagtgtaataataagtgtcagtgtcgtgtcgatgtcggacgtgacatgtgtccgacac 32749793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 36096410 - 36096343
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacac 111  Q
    ||||| ||| |||| |||||| | ||||||||||||||| | ||||||||| |||||||||| |||||    
T  36096410 tcacaaaatgcagtgtaattatatttgtcggtgtcgtgtcgatgtcggacacgacacgtgtctgacac 36096343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 126
Target Start/End: Original strand, 27084322 - 27084364
Alignment:
Q  84 ggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    ||||||||||| ||||||||||| ||||||| |||||||||||    
T  27084322 ggtgtcggacacgacacgtgtccaacaccgagacacgcctaat 27084364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 34337201 - 34337152
Alignment:
Q  59 taattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccga 108  Q
    ||||||||| |||||||||| ||| |||||||||||  ||||||||||||    
T  34337201 taattacaagtgtcggtgtcctgtcggtgtcggacacaacacgtgtccga 34337152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 151
Target Start/End: Original strand, 37559025 - 37559095
Alignment:
Q  79 gtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgtgcttcata 151  Q
    |||| |||||||||| |||||||||||||||||||  |||||| ||  || |||| ||||| |||||||||||    
T  37559025 gtgtcggtgtcggacttgacacgtgtccgacaccggtacacgctta--atccgaggagtgtccgtgcttcata 37559095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 150
Target Start/End: Complemental strand, 2438730 - 2438661
Alignment:
Q  79 gtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgtgcttcat 150  Q
    |||| ||||||||||| ||||| ||||||||||||  |||||||||  || |||| ||||| ||||||||||    
T  2438730 gtgtcggtgtcggacacgacacatgtccgacaccgggacacgccta--atccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 23058477 - 23058433
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgt 88  Q
    ||||||||| |||| ||||||||| |||||||||||||| |||||    
T  23058477 tcacataatccagtgtaattacaagtgtcggtgtcgtgtcggtgt 23058433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 34785017 - 34784912
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgt 143  Q
    |||||||||| ||| |||||| |  |||||||||||||| ||| ||||||| ||||| |||| ||||| |  ||||||||  ||| |||| |||||  ||    
T  34785017 tcacataatttagtgtaattatatgtgtcggtgtcgtgtcggtatcggacacgacacctgtctgacacggggacacgcct--tattcgaggagtgtctgt 34784920  T
Q  144 gcttcata 151  Q
    ||||||||    
T  34784919 gcttcata 34784912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 3884 - 3802
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||||||| ||||||||| |||| ||||||||| ||||||||||| ||||| ||||||||| ||| |||||||||||    
T  3884 tcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggacacgacacatgtccgacatcgagacacgcctaat 3802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 53204 - 53273
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccg 113  Q
    |||||||||||||| |||||| || |||||||| ||||| ||||||||||||||||||||||||||||||    
T  53204 tcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgtccgacaccg 53273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 241618 - 241723
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgt 143  Q
    |||||||||| ||| ||||||  | |||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||  || |||| ||||| |||    
T  241618 tcacataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggacacgacacgtgtccgacaccgggacacgccta--atccgagaagtgtccgt 241715  T
Q  144 gcttcata 151  Q
    ||||||||    
T  241716 gcttcata 241723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 5e-19; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 22652000 - 22652105
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgt 143  Q
    |||||||||||| | ||||||||| |||||||||||||| ||||||||||| |||| |||||||||||||  ||||| |||  || |||| ||||| |||    
T  22652000 tcacataattcaatataattacaagtgtcggtgtcgtgtcggtgtcggacacgacatgtgtccgacaccgggacacgtcta--atccgaggagtgtccgt 22652097  T
Q  144 gcttcata 151  Q
    ||||||||    
T  22652098 gcttcata 22652105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 44 - 156
Target Start/End: Complemental strand, 29510339 - 29510229
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgt 143  Q
    ||||| |||||||| ||||||||| ||||||||| |||| ||||||||||| ||| ||||||||||||||  |||| ||||  || |||| ||||| |||    
T  29510339 tcacaaaattcagtataattacaagtgtcggtgtagtgtcggtgtcggacacgacgcgtgtccgacaccgggacacaccta--atccgaggagtgtccgt 29510242  T
Q  144 gcttcatatgtta 156  Q
    |||||||| ||||    
T  29510241 gcttcataggtta 29510229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 15816164 - 15816059
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgt 143  Q
    |||||||||| ||| |||||| || |||||||||||||| ||||||||||| ||||||  ||||||||||  |||||||||  || |||| ||||| |||    
T  15816164 tcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacgacacgaatccgacaccgggacacgccta--atccgagaagtgtccgt 15816067  T
Q  144 gcttcata 151  Q
    ||||||||    
T  15816066 gcttcata 15816059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 2572091 - 2572022
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccg 113  Q
    |||||||||| ||| ||||||||| ||||||||||||||  |||||||||| ||||||||||||| ||||    
T  2572091 tcacataatttagtgtaattacaagtgtcggtgtcgtgtctgtgtcggacacgacacgtgtccgataccg 2572022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 22197777 - 22197695
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtc-gtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||| ||| ||||||||| |||| ||||| |||| | |||||||||||||||||||||||||||| | ||||||||||    
T  22197777 tcacataatttagtgtaattacaagtgtcagtgtcagtgtcg-tgtcggacatgacacgtgtccgacaccggatcacgcctaat 22197695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 8343340 - 8343422
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||| ||| ||||||||| |||| |||||||  | ||||| |||| ||||||||||||||||||  |||||||||||    
T  8343340 tcacataatttagtgtaattacaagtgtcagtgtcgtacacgtgtccgacacgacacgtgtccgacaccgggacacgcctaat 8343422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 28745522 - 28745592
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccga 114  Q
    |||||||||||| | ||| ||||| ||||| |||||||| ||||||||||| ||||| |||||| ||||||    
T  28745522 tcacataattcaatgtaactacaaatgtcgatgtcgtgtcggtgtcggacacgacacctgtccgtcaccga 28745592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 29447145 - 29447063
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||||| | ||| ||||| |||||||||| ||| ||||||||||| |||| ||||| ||||||   |||||||||||    
T  29447145 tcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacgacatgtgtctgacaccaggacacgcctaat 29447063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 25566865 - 25566910
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtc 89  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||    
T  25566865 tcacataattcagtgtaattacaagtgtcggtgtcgtgttggtgtc 25566910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 11944689 - 11944794
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgt 143  Q
    |||||||| ||||| |||||| |  |||||||||||||| | ||||  ||| |||| || ||||||||||| |||||||||  || |||  |||||||||    
T  11944689 tcacataactcagtgtaattatatgtgtcggtgtcgtgttgatgtcatacacgacatgtatccgacaccgagacacgccta--atccgatgagtgttcgt 11944786  T
Q  144 gcttcata 151  Q
    ||||||||    
T  11944787 gcttcata 11944794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 5813640 - 5813687
Alignment:
Q  79 gtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||| ||||||||||| ||||||||||||||||||  |||||||||||    
T  5813640 gtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaat 5813687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 11927121 - 11927039
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||||||| |||||| |  |||||||||||||| ||||||  ||| |||| || ||| ||| ||| |||||||||||    
T  11927121 tcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcatacacgacatgtatccaacatcgagacacgcctaat 11927039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 151
Target Start/End: Original strand, 21465451 - 21465541
Alignment:
Q  59 taattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgtgcttcata 151  Q
    ||||||||| ||| ||||||||||  |||||||||| ||||||||||| |||| |  | ||||||||| |  ||| ||||| |||||||||||    
T  21465451 taattacaagtgttggtgtcgtgtcagtgtcggacacgacacgtgtccaacacagggatacgcctaattt--gaggagtgtccgtgcttcata 21465541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 105
Target Start/End: Complemental strand, 26902210 - 26902149
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtc 105  Q
    |||||||||||||| |||||| |  |||||||||||| |  |||||||||| ||||||||||    
T  26902210 tcacataattcagtgtaattatatgtgtcggtgtcgtatgagtgtcggacacgacacgtgtc 26902149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 29447468 - 29447537
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccg 113  Q
    |||||||||| ||| |||||| |  ||| |||||||||| |||||| |||| |||| |||||||||||||    
T  29447468 tcacataattaagtgtaattatatgtgttggtgtcgtgtcggtgtcagacacgacatgtgtccgacaccg 29447537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 4673454 - 4673378
Alignment:
Q  50 aattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||| ||||||||| | || ||||| ||| | ||||||||| ||| | | |||||||||| ||||||||||||    
T  4673454 aattcagtgtaattacaagtatcagtgtcttgttgatgtcggacacgacgcatatccgacaccggaacacgcctaat 4673378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 24362237 - 24362165
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtc-ggacatgacacgtgtccgacaccgaa 115  Q
    |||||||||||||| |||||| |  ||||  |||||||| |||||| ||||| |||||||||||| |||||||    
T  24362237 tcacataattcagtgtaattatatgtgtcaatgtcgtgtcggtgtccggacacgacacgtgtccggcaccgaa 24362165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 149
Target Start/End: Complemental strand, 24727785 - 24727684
Alignment:
Q  46 acataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgtgc 145  Q
    ||||||| |||| ||||| ||| |||  ||||| ||| ||| ||| ||||||||||||||| | |||  ||||||||||  || |||| |||||||||||    
T  24727785 acataatgcagtgtaatttcaagtgttagtgtcatgtcggtatcgaacatgacacgtgtccaataccagaacacgccta--atccgagaagtgttcgtgc 24727688  T
Q  146 ttca 149  Q
    ||||    
T  24727687 ttca 24727684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 31694745 - 31694640
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgt 143  Q
    |||||||||||||| ||||||||| |||||||||||||| |||||||||||  |||| | | |||||||| |||||||||||| |  ||| ||||| |||    
T  31694745 tcacataattcagtataattacaagtgtcggtgtcgtgtcggtgtcggacacaacacatattcgacaccggaacacgcctaatct--gaggagtgtccgt 31694648  T
Q  144 gcttcata 151  Q
    ||||||||    
T  31694647 gcttcata 31694640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 47989521 - 47989626
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgt 143  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||||||| ||||| |||| |||| ||  |||||||||  || |||| ||||| |||    
T  47989521 tcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacatgtctgacatcgggacacgccta--atccgaggagtgtccgt 47989618  T
Q  144 gcttcata 151  Q
    ||||||||    
T  47989619 gcttcata 47989626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 6427488 - 6427570
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||||| | ||| ||||| |||| |||||||||||| |||||||| ||||||||||||||||||  |||||||||||    
T  6427488 tcacataattcaatgtaactacaagtgtcagtgtcgtgtaggcgtcggacacgacacgtgtccgacaccgggacacgcctaat 6427570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 5944307 - 5944412
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgt 143  Q
    |||||||||||||| |||||| || |||||||||||||| | || ||||||  |||| ||||||||||||  | |||||||  || |||| |||||||||    
T  5944307 tcacataattcagtgtaattataagtgtcggtgtcgtgtcgatgacggacacaacacatgtccgacaccgggatacgccta--atccgaggagtgttcgt 5944404  T
Q  144 gcttcata 151  Q
    ||||||||    
T  5944405 gcttcata 5944412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 6612204 - 6612124
Alignment:
Q  46 acataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||||| ||||||||| |||||||||||||| | ||||||||| || | ||||||||||||   |||||||||||    
T  6612204 acataattcagtgtaattacaagtgtcggtgtcgtgtcgatgtcggacacgatatgtgtccgacaccaggacacgcctaat 6612124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 40917779 - 40917855
Alignment:
Q  50 aattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||| ||| ||||||||| | |||||||||||| ||||| ||||| ||||||||||||||||||  |||||||||||    
T  40917779 aattaagtgtaattacaagtctcggtgtcgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaat 40917855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 21032245 - 21032312
Alignment:
Q  59 taattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    ||||||||| |||||||||||||| ||||||||||| |||| |||||||||| ||| | |||||||||    
T  21032245 taattacaaatgtcggtgtcgtgtgggtgtcggacacgacatgtgtccgacatcgagagacgcctaat 21032312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 9828068 - 9828173
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgt 143  Q
    |||||||||||||| |||||  |  ||||||||||||||  ||||| |||| ||||||||||||||||||  ||||| |||  || |||| ||||| |||    
T  9828068 tcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacgacacgtgtccgacaccgggacacgtcta--atccgaggagtgtccgt 9828165  T
Q  144 gcttcata 151  Q
    ||||||||    
T  9828166 gcttcata 9828173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 1486744 - 1486668
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||||||| |||||| || ||||||||||||||      |||||| ||||||||||||||||||  |||||||||||    
T  1486744 tcacataattcagtgtaattataagtgtcggtgtcgtgt------cggacacgacacgtgtccgacaccgggacacgcctaat 1486668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 106
Target Start/End: Original strand, 34371737 - 34371799
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtcc 106  Q
    |||||||||||||| |||||| |  |||||||||||||| ||||||||| | |||||||||||    
T  34371737 tcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcggatacgacacgtgtcc 34371799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 113
Target Start/End: Complemental strand, 9629931 - 9629866
Alignment:
Q  48 ataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccg 113  Q
    |||||||||| | |||| || |||||||||||||| | ||||||||| ||||| ||||||||||||    
T  9629931 ataattcagtgtgattataagtgtcggtgtcgtgtcgatgtcggacacgacacatgtccgacaccg 9629866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 119
Target Start/End: Original strand, 25361910 - 25361983
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacac 119  Q
    |||||||||||||| |||||| |  |||| ||||||||| ||||||||||| ||||  |||||||||||| |||||    
T  25361910 tcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacacgaca--tgtccgacaccggaacac 25361983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 44482254 - 44482310
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacac 100  Q
    |||||||||||||| |||||| |  |||||||||||||| ||||||||||| |||||    
T  44482254 tcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacac 44482310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 46348394 - 46348350
Alignment:
Q  79 gtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcct 123  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||||    
T  46348394 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcct 46348350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 109
Target Start/End: Complemental strand, 30173795 - 30173732
Alignment:
Q  46 acataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgac 109  Q
    |||||| ||||| ||||||||| ||||||||||||||  || ||||||| ||||| ||||||||    
T  30173795 acataactcagtgtaattacaagtgtcggtgtcgtgtccgtatcggacacgacacatgtccgac 30173732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 51410073 - 51410120
Alignment:
Q  79 gtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||| ||||||||||| ||||||| ||||||||||| |||||||||||    
T  51410073 gtgtcggtgtcggacacgacacgtatccgacaccgagacacgcctaat 51410120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 6332694 - 6332740
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcg 90  Q
    |||||||||||||| ||||||||| | |||||||||||| |||||||    
T  6332694 tcacataattcagtgtaattacaagtatcggtgtcgtgttggtgtcg 6332740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 24577221 - 24577183
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgt 82  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  24577221 tcacataattcagtgtaattacaagtgtcggtgtcgtgt 24577183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 32461498 - 32461417
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||| | | ||||||||| ||| ||||| |||| ||||||||||| |||||||||| ||||| |  |||||||||||    
T  32461498 tcacataatttaatgtaattacaagtgttggtgt-gtgtcggtgtcggacacgacacgtgtctgacactgggacacgcctaat 32461417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 126
Target Start/End: Original strand, 15323222 - 15323263
Alignment:
Q  85 gtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||| ||| |||||||||||||||||||||||||| ||||||    
T  15323222 gtgttggatatgacacgtgtccgacaccgaaacacacctaat 15323263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 22515898 - 22515828
Alignment:
Q  79 gtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgtgcttcata 151  Q
    |||| ||||||||||| ||||| | ||||||||||| |||||||||  || |||| ||||| |||||||||||    
T  22515898 gtgtcggtgtcggacacgacacatatccgacaccgagacacgccta--atccgaggagtgtccgtgcttcata 22515828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 5376533 - 5376485
Alignment:
Q  46 acataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggaca 94  Q
    |||||||||||| |||||| || |||||||||||||| | |||||||||    
T  5376533 acataattcagtgtaattaaaagtgtcggtgtcgtgtcgatgtcggaca 5376485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 113
Target Start/End: Complemental strand, 27471600 - 27471532
Alignment:
Q  45 cacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccg 113  Q
    ||||||||||||| ||||||||  ||| |||||| | | ||||| ||| | ||||||||||||||||||    
T  27471600 cacataattcagtgtaattacatgtgttggtgtcatatcggtgttggatacgacacgtgtccgacaccg 27471532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 46940798 - 46940749
Alignment:
Q  100 cgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgtgcttcata 151  Q
    |||||||||||||| ||||||||||  || |||| |||||||||||||||||    
T  46940798 cgtgtccgacaccggaacacgccta--atccgaggagtgttcgtgcttcata 46940749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 7e-18; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 30982913 - 30982831
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    ||||||| |||||| |||||| || |||||||||||||| |||||| |||| ||||||||||||||||||  |||||||||||    
T  30982913 tcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaat 30982831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 19482692 - 19482797
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgt 143  Q
    ||||||||||| || ||||||||| ||| |||||||||| ||| | ||||| |||||||||||||||| |  |||| ||||  || |||| |||||||||    
T  19482692 tcacataattcggtgtaattacaagtgttggtgtcgtgtcggtattggacacgacacgtgtccgacactgggacacaccta--atccgaggagtgttcgt 19482789  T
Q  144 gcttcata 151  Q
    ||||||||    
T  19482790 gcttcata 19482797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 19312359 - 19312441
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||| ||||||| |||||| || | |||||||||||| | ||||||| | ||||||||||||||||||| ||||| |||||    
T  19312359 tcacatgattcagtgtaattataagtatcggtgtcgtgtcgttgtcggatacgacacgtgtccgacaccgagacacgtctaat 19312441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 34306815 - 34306745
Alignment:
Q  79 gtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgtgcttcata 151  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||||||| |  ||| | |||||||||||||||    
T  34306815 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatct--gaggaatgttcgtgcttcata 34306745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 15724563 - 15724507
Alignment:
Q  70 gtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    ||||||||||||| |||||||||||  ||||||||| |||||| |||||||||||||    
T  15724563 gtcggtgtcgtgtcggtgtcggacacaacacgtgtcagacaccaaaacacgcctaat 15724507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 22234925 - 22234857
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacacc 112  Q
    |||||||||||||| |||||  |  |||||||||||||| |||||| |||| |||||||||||||||||    
T  22234925 tcacataattcagtgtaattctatgtgtcggtgtcgtgtcggtgtctgacacgacacgtgtccgacacc 22234857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 21945551 - 21945598
Alignment:
Q  79 gtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||| ||||||||||||||||| |||||||||||| ||||||||||||    
T  21945551 gtgtcggtgtcggacatgacacatgtccgacaccgcaacacgcctaat 21945598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 23292997 - 23292927
Alignment:
Q  79 gtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgtgcttcata 151  Q
    |||| ||||||||||| ||||||||||||||||||  |||||||||  || |||| ||||| |||||||||||    
T  23292997 gtgtcggtgtcggacacgacacgtgtccgacaccgggacacgccta--atccgaggagtgtccgtgcttcata 23292927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 30838238 - 30838315
Alignment:
Q  48 ataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaa 125  Q
    |||||| ||| |||||| || | ||||||||||||  |||||||||  ||||||||||||||||| | ||||||||||    
T  30838238 ataatttagtgtaattataagtatcggtgtcgtgtcagtgtcggacgcgacacgtgtccgacaccaagacacgcctaa 30838315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 847977 - 848057
Alignment:
Q  46 acataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||| | ||||||||| |||||||||| ||| ||||||||||| || |||||||  ||||||  |||| ||||||    
T  847977 acataattcactataattacaagtgtcggtgtcttgttggtgtcggacacgaaacgtgtcgaacaccgggacacacctaat 848057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 24613736 - 24613668
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacacc 112  Q
    |||||||||||| | ||| ||||| |||||||||| ||| |||||| |||| |||||||||| ||||||    
T  24613736 tcacataattcaatgtaagtacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtctgacacc 24613668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 38148760 - 38148680
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgccta 124  Q
    |||||||||||||| |||||  || ||||| |||||||| ||||| ||||| ||||||| || ||||| | ||||||||||    
T  38148760 tcacataattcagtgtaattttaaatgtcgatgtcgtgttggtgttggacacgacacgtatctgacactggaacacgccta 38148680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 27706212 - 27706130
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||| ||| ||||||||| |||  |||||||||   ||||||||| ||||||| ||||| ||||  |||||||||||    
T  27706212 tcacataatttagtgtaattacaagtgtgagtgtcgtgttaatgtcggacacgacacgtatccgataccgggacacgcctaat 27706130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 4383391 - 4383436
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtc 89  Q
    |||||||||||||| ||||||||| |||| ||||||||| ||||||    
T  4383391 tcacataattcagtgtaattacaaatgtcagtgtcgtgtcggtgtc 4383436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 53490784 - 53490724
Alignment:
Q  59 taattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacac 119  Q
    ||||||||| |||| || |||||| ||||||||||| ||||  ||||| ||||||||||||    
T  53490784 taattacaagtgtcagtatcgtgtcggtgtcggacacgacaaatgtccaacaccgaaacac 53490724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 8670 - 8565
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaatatacgagcagtgttcgt 143  Q
    ||||||||||| || ||||||||| |||||||||||||| ||| ||||||| || ||||||||||||| |  |||||||||  || |||| ||||| |||    
T  8670 tcacataattcggtataattacaaatgtcggtgtcgtgtcggtatcggacacgatacgtgtccgacactggtacacgccta--attcgaggagtgtccgt 8573  T
Q  144 gcttcata 151  Q
    ||||||||    
T  8572 gcttcata 8565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 2952 - 3034
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||||||||| ||| ||||||||| | || ||||||||| ||| || |||| ||||||||| |||||||| ||||||||||||    
T  2952 tcacataatttagtgtaattacaagtatcagtgtcgtgtcggtatcagacacgacacgtgttcgacaccggaacacgcctaat 3034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 71749 - 71831
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    ||||| |||||||| ||||||| | |||| ||||||||| |||||||||||  |||||||||||||||||  ||||| |||||    
T  71749 tcacacaattcagtgtaattactagtgtcagtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgactaat 71831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 263406 - 263325
Alignment:
Q  45 cacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    ||||||||||||| |||||| || |||| ||||||||| |||||| |||| ||||||||| ||| ||| | |||||||||||    
T  263406 cacataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcagacacgacacgtgttcgataccaagacacgcctaat 263325  T

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Target: scaffold0053 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 8846 - 8893
Alignment:
Q  79 gtgtaggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    |||| ||||||||||| ||||||||||||||||||| |||||||||||    
T  8846 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaat 8893  T

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Target: scaffold0361 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 126
Target Start/End: Original strand, 14580 - 14622
Alignment:
Q  84 ggtgtcggacatgacacgtgtccgacaccgaaacacgcctaat 126  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  14580 ggtgtcggacacgacacgtgtccgacaccgagacacgcctaat 14622  T

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Target: scaffold0123 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 44560 - 44493
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccgacac 111  Q
    |||||||||||||| |||||| |  ||||||| |||||| ||||| |||||  |||||||||||||||    
T  44560 tcacataattcagtgtaattatatgtgtcggtatcgtgtcggtgttggacacaacacgtgtccgacac 44493  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 23794 - 23832
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgt 82  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  23794 tcacataattcagtgtaattacaagtgtcggtgtcgtgt 23832  T

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Target: scaffold0171 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 23535 - 23599
Alignment:
Q  44 tcacataattcagtctaattacaattgtcggtgtcgtgtaggtgtcggacatgacacgtgtccga 108  Q
    |||||||||||||| |||||| || |||| ||||||| | ||||||||||| || | ||||||||    
T  23535 tcacataattcagtgtaattataagtgtcagtgtcgtttcggtgtcggacacgatatgtgtccga 23599  T

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