View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2662_high_4 (Length: 823)

Name: NF2662_high_4
Description: NF2662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2662_high_4
NF2662_high_4
[»] chr8 (42 HSPs)
chr8 (346-806)||(43969928-43970400)
chr8 (24-221)||(43969649-43969846)
chr8 (399-523)||(9812274-9812398)
chr8 (394-551)||(15750252-15750410)
chr8 (395-547)||(6374490-6374640)
chr8 (464-547)||(34796674-34796756)
chr8 (461-551)||(514950-515040)
chr8 (469-543)||(40228656-40228730)
chr8 (399-531)||(40399805-40399937)
chr8 (464-551)||(14234208-14234295)
chr8 (465-551)||(34156608-34156694)
chr8 (469-543)||(39698663-39698737)
chr8 (400-527)||(15227667-15227794)
chr8 (478-551)||(39463332-39463405)
chr8 (469-528)||(29025746-29025805)
chr8 (469-531)||(43448810-43448872)
chr8 (461-547)||(45358884-45358970)
chr8 (462-547)||(13367939-13368024)
chr8 (387-529)||(29312108-29312248)
chr8 (395-532)||(41679404-41679538)
chr8 (463-551)||(42179168-42179256)
chr8 (462-529)||(13496333-13496400)
chr8 (469-536)||(36669791-36669858)
chr8 (469-531)||(4760556-4760617)
chr8 (469-531)||(31899245-31899307)
chr8 (469-526)||(43084624-43084681)
chr8 (468-547)||(5295402-5295482)
chr8 (476-531)||(4989572-4989627)
chr8 (469-531)||(17921050-17921113)
chr8 (469-527)||(9304631-9304688)
chr8 (477-531)||(9880506-9880560)
chr8 (461-522)||(2375836-2375897)
chr8 (399-450)||(515076-515127)
chr8 (469-527)||(7839556-7839614)
chr8 (394-444)||(12339892-12339942)
chr8 (477-535)||(31233945-31234003)
chr8 (469-522)||(5790643-5790696)
chr8 (393-450)||(33746061-33746118)
chr8 (466-531)||(43561416-43561481)
chr8 (385-449)||(22699574-22699638)
chr8 (471-527)||(44713632-44713688)
chr8 (399-450)||(6115932-6115983)
[»] chr3 (52 HSPs)
chr3 (399-551)||(30315382-30315535)
chr3 (399-547)||(36844667-36844815)
chr3 (461-551)||(9189422-9189512)
chr3 (461-551)||(30934796-30934886)
chr3 (469-543)||(13756867-13756941)
chr3 (469-531)||(31853556-31853618)
chr3 (469-535)||(39359010-39359076)
chr3 (461-546)||(19373664-19373749)
chr3 (389-550)||(7230809-7230969)
chr3 (469-543)||(23525310-23525384)
chr3 (461-551)||(38141023-38141113)
chr3 (399-547)||(42072062-42072210)
chr3 (469-531)||(44676315-44676377)
chr3 (395-551)||(48903359-48903515)
chr3 (462-551)||(40487901-40487990)
chr3 (461-552)||(8817213-8817304)
chr3 (469-531)||(11393639-11393701)
chr3 (469-543)||(33194025-33194099)
chr3 (469-531)||(38016468-38016530)
chr3 (469-543)||(41287490-41287564)
chr3 (469-543)||(47895338-47895412)
chr3 (395-521)||(27067710-27067828)
chr3 (469-551)||(45566872-45566955)
chr3 (469-531)||(45213716-45213778)
chr3 (466-544)||(50346705-50346783)
chr3 (461-522)||(40717657-40717717)
chr3 (471-531)||(50088312-50088372)
chr3 (469-531)||(30431214-30431276)
chr3 (469-527)||(32492176-32492233)
chr3 (481-531)||(35557764-35557814)
chr3 (469-531)||(36460900-36460961)
chr3 (469-531)||(38363885-38363947)
chr3 (395-504)||(47823339-47823446)
chr3 (469-527)||(51398108-51398166)
chr3 (469-522)||(41850485-41850537)
chr3 (469-529)||(39168802-39168862)
chr3 (395-450)||(31190650-31190705)
chr3 (469-528)||(33024294-33024353)
chr3 (400-450)||(40717298-40717348)
chr3 (469-531)||(45518478-45518540)
chr3 (469-531)||(53200675-53200737)
chr3 (469-522)||(2458111-2458164)
chr3 (469-522)||(30426317-30426370)
chr3 (469-522)||(47138068-47138121)
chr3 (486-551)||(48901793-48901858)
chr3 (387-450)||(11017006-11017070)
chr3 (469-509)||(36729766-36729806)
chr3 (491-543)||(36729826-36729878)
chr3 (395-450)||(48901881-48901936)
chr3 (394-444)||(11337542-11337592)
chr3 (387-440)||(4759464-4759517)
chr3 (506-547)||(22857167-22857208)
[»] chr1 (46 HSPs)
chr1 (399-551)||(26594995-26595147)
chr1 (399-551)||(29567969-29568121)
chr1 (395-547)||(8894937-8895089)
chr1 (387-551)||(25560786-25560950)
chr1 (461-551)||(31699277-31699367)
chr1 (464-547)||(27209066-27209149)
chr1 (397-527)||(8989563-8989693)
chr1 (394-516)||(44556990-44557112)
chr1 (469-531)||(34110621-34110683)
chr1 (470-551)||(46286814-46286896)
chr1 (461-551)||(28538277-28538368)
chr1 (469-551)||(49468706-49468789)
chr1 (469-531)||(15823128-15823190)
chr1 (395-547)||(18794464-18794616)
chr1 (469-531)||(32806933-32806995)
chr1 (469-531)||(48009104-48009166)
chr1 (477-529)||(38530842-38530894)
chr1 (461-551)||(7191194-7191285)
chr1 (476-531)||(9915537-9915592)
chr1 (395-531)||(5072-5207)
chr1 (394-545)||(2610757-2610902)
chr1 (469-527)||(5463673-5463731)
chr1 (469-531)||(10842874-10842936)
chr1 (469-529)||(52125131-52125191)
chr1 (469-531)||(25151903-25151966)
chr1 (469-531)||(31798683-31798746)
chr1 (461-531)||(5225813-5225883)
chr1 (469-531)||(31491765-31491827)
chr1 (469-531)||(48025249-48025311)
chr1 (469-522)||(1740635-1740688)
chr1 (469-522)||(44108704-44108757)
chr1 (469-522)||(50094333-50094386)
chr1 (469-525)||(43759432-43759488)
chr1 (461-544)||(9092673-9092755)
chr1 (477-531)||(24611522-24611577)
chr1 (469-531)||(46046067-46046129)
chr1 (469-522)||(15573716-15573769)
chr1 (467-531)||(46271016-46271081)
chr1 (506-551)||(46554871-46554916)
chr1 (467-531)||(49900750-49900815)
chr1 (389-445)||(7190972-7191028)
chr1 (469-521)||(49426414-49426466)
chr1 (387-450)||(27209539-27209602)
chr1 (395-444)||(14373345-14373394)
chr1 (464-501)||(33694413-33694450)
chr1 (469-522)||(52066285-52066338)
[»] chr7 (49 HSPs)
chr7 (395-551)||(28289287-28289444)
chr7 (461-551)||(29636214-29636304)
chr7 (461-551)||(21819356-21819446)
chr7 (462-550)||(47461363-47461450)
chr7 (464-551)||(10476209-10476296)
chr7 (394-551)||(48843625-48843785)
chr7 (464-545)||(40339538-40339619)
chr7 (395-531)||(6563340-6563477)
chr7 (464-547)||(21752102-21752185)
chr7 (469-531)||(1742085-1742147)
chr7 (469-531)||(22298090-22298152)
chr7 (469-543)||(23155457-23155530)
chr7 (469-531)||(13405122-13405184)
chr7 (469-531)||(35777913-35777975)
chr7 (469-531)||(37815818-37815880)
chr7 (469-543)||(45933584-45933657)
chr7 (469-526)||(23935520-23935577)
chr7 (462-551)||(40753418-40753506)
chr7 (467-551)||(19104995-19105079)
chr7 (469-541)||(24680212-24680284)
chr7 (395-450)||(4268906-4268961)
chr7 (476-531)||(7759353-7759408)
chr7 (469-524)||(10599464-10599519)
chr7 (461-551)||(1031228-1031318)
chr7 (462-531)||(7335373-7335443)
chr7 (469-531)||(29530930-29530992)
chr7 (464-522)||(34012559-34012617)
chr7 (469-543)||(45948625-45948699)
chr7 (469-531)||(48684817-48684879)
chr7 (463-547)||(8293058-8293142)
chr7 (464-547)||(33939724-33939808)
chr7 (401-522)||(45499751-45499873)
chr7 (476-531)||(31418515-31418570)
chr7 (469-535)||(44453225-44453289)
chr7 (469-531)||(42879929-42879991)
chr7 (461-549)||(24780306-24780395)
chr7 (461-527)||(25055879-25055945)
chr7 (469-531)||(27935861-27935923)
chr7 (477-523)||(27947504-27947550)
chr7 (399-531)||(37490880-37491012)
chr7 (465-527)||(47187749-47187811)
chr7 (464-529)||(19303385-19303450)
chr7 (397-450)||(30312709-30312762)
chr7 (467-531)||(31196663-31196725)
chr7 (395-444)||(42286078-42286127)
chr7 (462-527)||(24133117-24133184)
chr7 (469-525)||(36808034-36808090)
chr7 (484-547)||(42753784-42753845)
chr7 (469-522)||(41137832-41137884)
[»] chr4 (52 HSPs)
chr4 (399-551)||(47817811-47817964)
chr4 (395-547)||(6991190-6991342)
chr4 (399-551)||(30261332-30261484)
chr4 (399-552)||(19451136-19451289)
chr4 (395-522)||(44061096-44061223)
chr4 (461-551)||(10573148-10573238)
chr4 (461-551)||(52162177-52162267)
chr4 (394-527)||(41496302-41496435)
chr4 (464-547)||(50203151-50203234)
chr4 (469-535)||(50623173-50623240)
chr4 (469-531)||(19878742-19878804)
chr4 (469-531)||(28734692-28734754)
chr4 (469-531)||(52957791-52957853)
chr4 (462-551)||(47458381-47458469)
chr4 (395-547)||(34413474-34413627)
chr4 (469-531)||(37654503-37654566)
chr4 (464-531)||(46392059-46392126)
chr4 (469-531)||(2728399-2728461)
chr4 (469-531)||(20448133-20448195)
chr4 (469-531)||(40345348-40345410)
chr4 (469-531)||(41920310-41920372)
chr4 (469-531)||(42605666-42605728)
chr4 (469-527)||(45043589-45043647)
chr4 (477-531)||(49089557-49089611)
chr4 (469-531)||(52848055-52848117)
chr4 (469-531)||(54042184-54042246)
chr4 (467-547)||(45839714-45839795)
chr4 (461-547)||(8971119-8971206)
chr4 (469-528)||(52253945-52254004)
chr4 (469-531)||(1819656-1819718)
chr4 (469-527)||(19930812-19930870)
chr4 (469-531)||(29370698-29370759)
chr4 (469-531)||(44571866-44571928)
chr4 (465-547)||(44868249-44868331)
chr4 (469-531)||(53814498-53814560)
chr4 (469-522)||(24940983-24941036)
chr4 (469-530)||(49080478-49080539)
chr4 (464-531)||(30780016-30780084)
chr4 (469-543)||(2493184-2493258)
chr4 (469-527)||(27653772-27653830)
chr4 (469-535)||(29519526-29519592)
chr4 (469-531)||(34316316-34316378)
chr4 (469-531)||(39984911-39984973)
chr4 (469-531)||(56373576-56373638)
chr4 (461-551)||(620169-620261)
chr4 (469-530)||(18430084-18430145)
chr4 (464-531)||(11364319-11364386)
chr4 (394-444)||(26934402-26934450)
chr4 (469-531)||(38991764-38991824)
chr4 (464-522)||(19903199-19903257)
chr4 (477-522)||(40010881-40010926)
chr4 (395-447)||(45839814-45839864)
[»] chr6 (32 HSPs)
chr6 (395-551)||(3988668-3988823)
chr6 (399-550)||(20226148-20226299)
chr6 (399-550)||(22120132-22120283)
chr6 (399-551)||(12459246-12459398)
chr6 (398-527)||(8957865-8957996)
chr6 (398-527)||(8961361-8961492)
chr6 (399-524)||(13011275-13011400)
chr6 (461-527)||(9940745-9940811)
chr6 (471-551)||(16128006-16128086)
chr6 (399-521)||(21271330-21271452)
chr6 (469-531)||(234128-234190)
chr6 (461-551)||(1502742-1502832)
chr6 (469-531)||(31443442-31443504)
chr6 (461-551)||(17552236-17552327)
chr6 (462-551)||(17828356-17828445)
chr6 (399-522)||(13503771-13503893)
chr6 (478-531)||(29713412-29713465)
chr6 (464-547)||(577138-577222)
chr6 (464-532)||(32619817-32619885)
chr6 (469-551)||(10540473-10540556)
chr6 (469-531)||(24163711-24163773)
chr6 (399-504)||(32193930-32194034)
chr6 (469-551)||(1134998-1135081)
chr6 (461-551)||(12322873-12322966)
chr6 (399-527)||(18737015-18737143)
chr6 (469-531)||(23259322-23259384)
chr6 (469-522)||(19675081-19675134)
chr6 (476-547)||(17267611-17267683)
chr6 (463-531)||(3847745-3847813)
chr6 (491-551)||(32193775-32193835)
chr6 (469-532)||(10520387-10520450)
chr6 (469-543)||(24555924-24555999)
[»] chr5 (47 HSPs)
chr5 (399-547)||(11977665-11977813)
chr5 (395-547)||(7721172-7721317)
chr5 (464-551)||(36164960-36165047)
chr5 (399-551)||(14161827-14161980)
chr5 (395-547)||(21634189-21634340)
chr5 (395-547)||(21642436-21642587)
chr5 (399-527)||(34534456-34534584)
chr5 (395-522)||(13974376-13974503)
chr5 (399-545)||(843097-843243)
chr5 (399-527)||(1309286-1309414)
chr5 (387-531)||(7736467-7736612)
chr5 (469-531)||(2729783-2729845)
chr5 (469-531)||(34446024-34446086)
chr5 (469-531)||(42661937-42661999)
chr5 (469-529)||(42978070-42978130)
chr5 (395-531)||(38369965-38370101)
chr5 (467-531)||(4911110-4911175)
chr5 (469-522)||(8336404-8336457)
chr5 (461-550)||(15167001-15167090)
chr5 (464-545)||(27797858-27797938)
chr5 (461-551)||(28591612-28591706)
chr5 (468-528)||(14005989-14006049)
chr5 (464-532)||(38362130-38362198)
chr5 (469-531)||(6519070-6519133)
chr5 (469-536)||(34972647-34972714)
chr5 (469-531)||(3306006-3306068)
chr5 (465-551)||(7748891-7748977)
chr5 (469-531)||(14620491-14620553)
chr5 (469-531)||(39566277-39566339)
chr5 (469-527)||(39730044-39730102)
chr5 (464-521)||(7579586-7579643)
chr5 (469-522)||(29807311-29807364)
chr5 (469-522)||(39335200-39335253)
chr5 (469-528)||(42104060-42104119)
chr5 (395-498)||(27557744-27557847)
chr5 (469-551)||(4425047-4425130)
chr5 (469-520)||(21319309-21319360)
chr5 (468-531)||(41645330-41645392)
chr5 (469-535)||(26660845-26660910)
chr5 (469-535)||(26932438-26932503)
chr5 (469-522)||(21375647-21375700)
chr5 (399-450)||(4911037-4911088)
chr5 (461-496)||(27557944-27557979)
chr5 (469-520)||(27600499-27600550)
chr5 (477-522)||(13761823-13761868)
chr5 (462-495)||(34381787-34381820)
chr5 (469-522)||(39504828-39504881)
[»] chr2 (55 HSPs)
chr2 (399-531)||(37038697-37038829)
chr2 (395-535)||(8540127-8540268)
chr2 (465-551)||(18719426-18719512)
chr2 (461-547)||(10195752-10195838)
chr2 (395-551)||(33055964-33056120)
chr2 (399-527)||(11188177-11188305)
chr2 (467-540)||(43971573-43971646)
chr2 (464-547)||(33482222-33482305)
chr2 (469-531)||(19636602-19636664)
chr2 (469-531)||(19835195-19835257)
chr2 (462-547)||(27726410-27726493)
chr2 (469-531)||(29396677-29396739)
chr2 (462-551)||(4658222-4658313)
chr2 (462-529)||(27964215-27964282)
chr2 (469-531)||(441228-441290)
chr2 (469-531)||(4288708-4288770)
chr2 (469-531)||(32228008-32228070)
chr2 (469-531)||(38926700-38926762)
chr2 (469-545)||(12393916-12393992)
chr2 (469-531)||(29808906-29808969)
chr2 (469-527)||(1423289-1423347)
chr2 (469-531)||(4133116-4133178)
chr2 (469-527)||(6220401-6220459)
chr2 (469-527)||(12342191-12342249)
chr2 (477-531)||(43480875-43480929)
chr2 (469-531)||(45081897-45081959)
chr2 (395-531)||(7872702-7872836)
chr2 (462-551)||(11132624-11132713)
chr2 (469-522)||(30855208-30855261)
chr2 (469-522)||(34546145-34546198)
chr2 (467-532)||(40608601-40608666)
chr2 (469-528)||(36106400-36106459)
chr2 (464-527)||(36685734-36685796)
chr2 (469-531)||(8774147-8774208)
chr2 (469-531)||(8789427-8789488)
chr2 (477-531)||(13562088-13562142)
chr2 (469-531)||(16807514-16807576)
chr2 (469-531)||(16846795-16846857)
chr2 (489-551)||(18579240-18579302)
chr2 (387-495)||(29412113-29412221)
chr2 (461-523)||(34455793-34455855)
chr2 (469-531)||(42743123-42743184)
chr2 (464-531)||(19164450-19164514)
chr2 (465-547)||(19469601-19469685)
chr2 (395-450)||(12565394-12565449)
chr2 (476-531)||(42004985-42005039)
chr2 (469-531)||(25383482-25383544)
chr2 (399-449)||(43971951-43972001)
chr2 (464-504)||(14833752-14833792)
chr2 (477-532)||(18717169-18717224)
chr2 (387-442)||(45423790-45423845)
chr2 (399-444)||(681694-681739)
chr2 (506-551)||(7028847-7028892)
chr2 (462-535)||(15083155-15083225)
chr2 (395-444)||(35799396-35799445)
[»] scaffold0294 (1 HSPs)
scaffold0294 (469-535)||(3501-3567)
[»] scaffold0565 (2 HSPs)
scaffold0565 (399-550)||(9882-10033)
scaffold0565 (469-527)||(9639-9697)
[»] scaffold0182 (1 HSPs)
scaffold0182 (464-547)||(18247-18330)
[»] scaffold0136 (1 HSPs)
scaffold0136 (405-522)||(9647-9761)
[»] scaffold0300 (1 HSPs)
scaffold0300 (395-547)||(4642-4792)
[»] scaffold0026 (1 HSPs)
scaffold0026 (462-547)||(4218-4303)
[»] scaffold0110 (1 HSPs)
scaffold0110 (469-531)||(24737-24799)
[»] scaffold0983 (1 HSPs)
scaffold0983 (461-547)||(676-762)
[»] scaffold0502 (1 HSPs)
scaffold0502 (461-547)||(561-647)
[»] scaffold0015 (1 HSPs)
scaffold0015 (469-526)||(21078-21135)
[»] scaffold0048 (1 HSPs)
scaffold0048 (469-528)||(62730-62789)


Alignment Details
Target: chr8 (Bit Score: 306; Significance: 1e-172; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 346 - 806
Target Start/End: Original strand, 43969928 - 43970400
Alignment:
Q  346 gctaacatttgtctcattgtctgtattttcataaacagcaatccctcaattttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcat 445  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||| ||||| ||| |||| ||||||||||||    
T  43969928 gctaacatttgtctcattgtctgtattttcataaacagtaatcc-tcaattttaaaatgaatgccgtttaagatttttatacacatactaagaaatgcat 43970026  T
Q  446 taattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtata 545  Q
    |||||           | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  43970027 taattaaaagaaaaaaa-atgttattttatcaaattatcctaatcaactattgatttgtcttttattaaagaaaaaataatactttagaagtaatgtata 43970125  T
Q  546 tagtataaacgactttgagtctacgacaactacactacactgaagtggcaatagagagacgtaagtaaagaaggagactgtggtggccaatgaacgacac 645  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||| |    
T  43970126 tagtataaacgactttgggtctacgacaactacactacactgaagtggcaatagagagacgtaaataaagaaggagac--tggtggccaatgaacgacgc 43970223  T
Q  646 actacaaagctacgttgacggt----------ac------aatctctgattccctatttctttaaggaattctcacattgtttgcttccaatctctcact 729  Q
    ||||||||||||||||||||||          ||      || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43970224 actacaaagctacgttgacggttgcattgttgacggtacaaacctctgattccctatttctttaaggaattctcacattgtttgcttccaatctctcact 43970323  T
Q  730 taatctcacacactaattacaatgattcctaattatagagttgtcactttgattcatcgtatttattttcccattct 806  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  43970324 taatctcacacactaattacaatgattcctaattatagagttgtcactttgattcatcgtatttatttttccattct 43970400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 24 - 221
Target Start/End: Original strand, 43969649 - 43969846
Alignment:
Q  24 atatggcctcactttggatcacacaagtggaggttaaatcgcattaatgttgctagtaccccacacttgtgtgtgaccaaaatgaagaaaatcaaagaca 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43969649 atatggcctcactttggatcacacaagtggaggttaaatcgcattaatgttgctagtaccccacacttgtgtgtgaccaaaatgaagaaaatcaaagaca 43969748  T
Q  124 tcaaaatgcctaatacatgaccactataaactcttcaagactcccattgataacatgaaatataaggttgaaacctcaatcattgcattccacttcgc 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43969749 tcaaaatgcctaatacatgaccactataaactcttcaagactcccattgataacatgaaatataaggttgaaacctcaatcattgcattccacttcgc 43969846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 399 - 523
Target Start/End: Complemental strand, 9812398 - 9812274
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattg 498  Q
    |||||||||| |||||||||||||| ||| |||||||||||||||| |||||           ||||||||||||| |||||||||||||||||||||||    
T  9812398 aaaatgaatgccgtttaaggtttttatacacatattaagaaatgcactaattaaaataaagaaagatgttattttaccaaattatcctaatcaactattg 9812299  T
Q  499 gtttgtcttttattaaagaaaaaat 523  Q
    |||||| ||| ||||||||||||||    
T  9812298 gtttgtttttcattaaagaaaaaat 9812274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 394 - 551
Target Start/End: Original strand, 15750252 - 15750410
Alignment:
Q  394 attttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaac 493  Q
    |||| |||||||||||||||||  ||||||  || ||||||||||||| ||||||||          ||||| |||||||| ||||||||||||||||||    
T  15750252 atttcaaaatgaatgtcgtttatagtttttacacacatattaagaaatacattaattaaaagaaagagagatattattttaccaaattatcctaatcaac 15750351  T
Q  494 tattggtttgtcttttattaaag-aaaaaataatactttagaaataatgtatatagtat 551  Q
    ||||||||| | ||| ||||||| ||||||||||||||| ||| || ||||||||||||    
T  15750352 tattggtttatttttcattaaagaaaaaaataatactttggaagtagtgtatatagtat 15750410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 395 - 547
Target Start/End: Complemental strand, 6374640 - 6374490
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaact 494  Q
    |||||||||||| |||||||||||||||| ||   |||||| ||||| ||||||||           ||||||||||||| ||||||||| |||||||||    
T  6374640 ttttaaaatgaacgtcgtttaaggtttttataaatatattaggaaatacattaattaaaaaaaaa--agatgttattttaccaaattatcataatcaact 6374543  T
Q  495 attggtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
    ||| |||||| ||| |||||||||||||||||||||| ||| |||||||||||    
T  6374542 attagtttgtttttcattaaagaaaaaataatactttggaagtaatgtatata 6374490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 464 - 547
Target Start/End: Original strand, 34796674 - 34796756
Alignment:
Q  464 atgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||| ||| || ||||||||    
T  34796674 atgttattttatcaaattatcctaatcaactattggtttgtttttcattaaa-aaaaaataatactttggaagtagtgtatata 34796756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 461 - 551
Target Start/End: Complemental strand, 515040 - 514950
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||| |||| |||||| |||||||||  ||| || ||||||||||||    
T  515040 gagatgttattttagcaaattatcctaatcaactattggtttgtttttcattatagaaaatataatacttcggaagtagtgtatatagtat 514950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 469 - 543
Target Start/End: Complemental strand, 40228730 - 40228656
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgta 543  Q
    |||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||| |||||||    
T  40228730 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtaatgta 40228656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 399 - 531
Target Start/End: Original strand, 40399805 - 40399937
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattg 498  Q
    ||||| |||||||||||| ||||||  ||  |||||||||||||||||||||          || ||||||||||| ||||||||| ||||||||||||     
T  40399805 aaaataaatgtcgtttaaagtttttacacatatattaagaaatgcattaattaaaagaaagagatatgttattttaccaaattatcataatcaactatta 40399904  T
Q  499 gtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||| ||||||||||||||||||||||    
T  40399905 gtttgtttttcattaaagaaaaaataatacttt 40399937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 464 - 551
Target Start/End: Original strand, 14234208 - 14234295
Alignment:
Q  464 atgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    ||||||||||  ||||||||||||||||||||||||||||| |||  ||||||||||||||||| ||| ||| || ||||||||||||    
T  14234208 atgttattttgccaaattatcctaatcaactattggtttgtttttcgttaaagaaaaaataatattttggaagtagtgtatatagtat 14234295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 465 - 551
Target Start/End: Complemental strand, 34156694 - 34156608
Alignment:
Q  465 tgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||||||||||||||||||| |||||||| |||||||||| ||| |||||||||||||||||| ||| ||| || |||| |||||||    
T  34156694 tgttattttatcaaattatcataatcaaccattggtttgtttttcattaaagaaaaaataatattttggaagtagtgtacatagtat 34156608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 469 - 543
Target Start/End: Original strand, 39698663 - 39698737
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgta 543  Q
    |||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||| ||| |||||||    
T  39698663 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatattttggaagtaatgta 39698737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 400 - 527
Target Start/End: Complemental strand, 15227794 - 15227667
Alignment:
Q  400 aaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattgg 499  Q
    |||||||||||||||||| |||||  || ||||||||||||||||||||||           |||||||||||||||||||||| ||||||||  ||| |    
T  15227794 aaatgaatgtcgtttaagatttttacacgcatattaagaaatgcattaattaaaagaaaaaaagatgttattttatcaaattattctaatcaatcattag 15227695  T
Q  500 tttgtcttttattaaagaaaaaataata 527  Q
    ||||| ||| ||||||||||||| ||||    
T  15227694 tttgtttttcattaaagaaaaaaaaata 15227667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 478 - 551
Target Start/End: Complemental strand, 39463405 - 39463332
Alignment:
Q  478 aattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    ||||||||||||||||| ||||||||| ||| |||||||||||||||||||||| ||| || ||||||||||||    
T  39463405 aattatcctaatcaactgttggtttgtttttcattaaagaaaaaataatactttggaagtagtgtatatagtat 39463332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 469 - 528
Target Start/End: Original strand, 29025746 - 29025805
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatac 528  Q
    |||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  29025746 attttaccaaattatcctaatcaactattgatttgttttttattaaagaaaaaataatac 29025805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 43448872 - 43448810
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| |||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  43448872 attttaccaaattatcctaatcaactattagtttgtttttcattaaagaaaaaataatacttt 43448810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 461 - 547
Target Start/End: Original strand, 45358884 - 45358970
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
    |||||||||||||| | ||||||  |||||||||||| |||||| ||| |||||||||||||||||||||| ||| || ||||||||    
T  45358884 gagatgttattttaccgaattattttaatcaactattagtttgtttttcattaaagaaaaaataatactttggaagtagtgtatata 45358970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 462 - 547
Target Start/End: Original strand, 13367939 - 13368024
Alignment:
Q  462 agatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
    ||||||||||||| || |||||||||||||| || |||||| | ||| |||||||||||||||||||||| ||| || ||||||||    
T  13367939 agatgttattttaccatattatcctaatcaattactggtttatttttcattaaagaaaaaataatactttggaagtagtgtatata 13368024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 387 - 529
Target Start/End: Original strand, 29312108 - 29312248
Alignment:
Q  387 tccctcaattttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcct 486  Q
    |||||| |||| ||||| ||||||||||||||||||   || || ||||| |||| ||||||||          ||||||||||||||   |||||| ||    
T  29312108 tccctccatttcaaaataaatgtcgtttaaggttttcacacacagattaaaaaatacattaattaaaagaaaaagagatgttattttac--aattatact 29312205  T
Q  487 aatcaactattggtttgtcttttattaaagaaaaaataatact 529  Q
    |||||||||||||||||| ||| ||||||||||||||||||||    
T  29312206 aatcaactattggtttgtttttcattaaagaaaaaataatact 29312248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 395 - 532
Target Start/End: Complemental strand, 41679538 - 41679404
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaact 494  Q
    ||||||||| ||||||||||||| ||||   || || || ||||||||||||||||          ||| |||||||||| ||||||||| |||||||||    
T  41679538 ttttaaaataaatgtcgtttaagatttt---acacacataaagaaatgcattaattaaaagaaagagaggtgttattttaccaaattatcataatcaact 41679442  T
Q  495 attggtttgtcttttattaaagaaaaaataatacttta 532  Q
    |||||||||  ||| |||||||||||||||||| ||||    
T  41679441 attggtttgattttcattaaagaaaaaataatatttta 41679404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 463 - 551
Target Start/End: Complemental strand, 42179256 - 42179168
Alignment:
Q  463 gatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||| |||||||  |||||||| |||| ||||||| |||||| ||| ||||||||||||||||||||||  ||||| ||||||||||||    
T  42179256 gatgatattttactaaattatcataattaactattagtttgtttttcattaaagaaaaaataatacttttaaaatagtgtatatagtat 42179168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 462 - 529
Target Start/End: Complemental strand, 13496400 - 13496333
Alignment:
Q  462 agatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatact 529  Q
    ||||||||||||| ||||||||||||||||| ||||||||||| |||  || ||||||||||||||||    
T  13496400 agatgttattttaccaaattatcctaatcaattattggtttgtttttctttcaagaaaaaataatact 13496333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 469 - 536
Target Start/End: Original strand, 36669791 - 36669858
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaa 536  Q
    |||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||||| ||| ||||    
T  36669791 attttaccaaattatcctaatcaactattagtttgtttttcattaaagaaaaaataatatttttgaaa 36669858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 4760556 - 4760617
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  4760556 attttaccaaattatcctaatcaactattggtttgtttttcattaaag-aaaaataatacttt 4760617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 31899245 - 31899307
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||| ||||| ||| ||||||||||| ||||||||||    
T  31899245 attttaccaaattatcctaatcaactattgatttgtttttcattaaagaaaagataatacttt 31899307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 526
Target Start/End: Original strand, 43084624 - 43084681
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataat 526  Q
    |||||| ||||||| ||||||||||||||||||||| ||| |||||||||||||||||    
T  43084624 attttaccaaattaccctaatcaactattggtttgtgtttcattaaagaaaaaataat 43084681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 468 - 547
Target Start/End: Original strand, 5295402 - 5295482
Alignment:
Q  468 tattttatcaaattatcctaatcaactattggtttgtcttttattaaag-aaaaaataatactttagaaataatgtatata 547  Q
    ||||||| ||||||||||||||||||||||| ||||| ||||||||| | ||||||||||| ||| ||| || ||||||||    
T  5295402 tattttaccaaattatcctaatcaactattgctttgttttttattaatgaaaaaaataatattttggaagtagtgtatata 5295482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 531
Target Start/End: Complemental strand, 4989627 - 4989572
Alignment:
Q  476 caaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||||||||| |||||||||| ||||| ||| ||||||||||||||||||||||    
T  4989627 caaattatcctactcaactattgatttgtttttcattaaagaaaaaataatacttt 4989572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 17921113 - 17921050
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaa-aaaataatacttt 531  Q
    |||||| |||||||| |||||||||||||||||||| ||| ||||||||| |||||||||||||    
T  17921113 attttaccaaattattctaatcaactattggtttgtttttcattaaagaaaaaaataatacttt 17921050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 527
Target Start/End: Original strand, 9304631 - 9304688
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataata 527  Q
    |||||| ||||||||||||||||||||||| ||||| |||| |||||||||||||||||    
T  9304631 attttaccaaattatcctaatcaactattgatttgt-ttttcttaaagaaaaaataata 9304688  T

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Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 477 - 531
Target Start/End: Original strand, 9880506 - 9880560
Alignment:
Q  477 aaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||||||||||||||||||| ||| | ||| ||||||||||||||||||||||    
T  9880506 aaattatcctaatcaactattgatttatttttcattaaagaaaaaataatacttt 9880560  T

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Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 461 - 522
Target Start/End: Original strand, 2375836 - 2375897
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaa 522  Q
    ||||||||||||||||||||| || |||||||  |||||||||| ||| |||||||||||||    
T  2375836 gagatgttattttatcaaattgtcttaatcaatcattggtttgtttttcattaaagaaaaaa 2375897  T

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Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 399 - 450
Target Start/End: Complemental strand, 515127 - 515076
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaatt 450  Q
    |||||||||||| |||||||||||| ||| |||||||||||||| |||||||    
T  515127 aaaatgaatgtcatttaaggtttttatacacatattaagaaatgtattaatt 515076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 527
Target Start/End: Complemental strand, 7839614 - 7839556
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataata 527  Q
    |||||| | ||||||| ||||||||||||||||| | ||| ||||||||||||||||||    
T  7839614 attttaccgaattatcttaatcaactattggtttatttttcattaaagaaaaaataata 7839556  T

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Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 444
Target Start/End: Complemental strand, 12339942 - 12339892
Alignment:
Q  394 attttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgca 444  Q
    |||| |||||||||||||||||||||||||  || ||||||||||||||||    
T  12339942 atttcaaaatgaatgtcgtttaaggtttttacacacatattaagaaatgca 12339892  T

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Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 477 - 535
Target Start/End: Original strand, 31233945 - 31234003
Alignment:
Q  477 aaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaa 535  Q
    |||| ||||||||||||||||||||| | ||| ||||||| |||||||||| |||||||    
T  31233945 aaatcatcctaatcaactattggtttatttttcattaaaggaaaaataataatttagaa 31234003  T

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Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 522
Target Start/End: Original strand, 5790643 - 5790696
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaa 522  Q
    |||||| ||||||||||||||||||||||||||||  ||| |||| ||||||||    
T  5790643 attttaccaaattatcctaatcaactattggtttgcttttcattagagaaaaaa 5790696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 393 - 450
Target Start/End: Original strand, 33746061 - 33746118
Alignment:
Q  393 aattttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaatt 450  Q
    ||||| |||||||||||| ||||||||||||  || |||||||| |||||||||||||    
T  33746061 aatttcaaaatgaatgtcatttaaggtttttacacgcatattaaaaaatgcattaatt 33746118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 466 - 531
Target Start/End: Complemental strand, 43561481 - 43561416
Alignment:
Q  466 gttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    ||||||||||||||||||| |||||||  |||  ||| | ||| ||||||||||||||||||||||    
T  43561481 gttattttatcaaattatcttaatcaatcattaatttatttttcattaaagaaaaaataatacttt 43561416  T

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Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 385 - 449
Target Start/End: Complemental strand, 22699638 - 22699574
Alignment:
Q  385 aatccctcaattttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaat 449  Q
    ||||||||  ||| ||||||| |||||||||||||| ||| || |||||||||||||||| ||||    
T  22699638 aatccctccgtttcaaaatgagtgtcgtttaaggttgttccacacatattaagaaatgcaataat 22699574  T

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Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 471 - 527
Target Start/End: Complemental strand, 44713688 - 44713632
Alignment:
Q  471 tttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataata 527  Q
    |||| ||||||||| |||||||||||| |||| | ||| ||||||||||||||||||    
T  44713688 tttaccaaattatcataatcaactattagtttatttttcattaaagaaaaaataata 44713632  T

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Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 399 - 450
Target Start/End: Original strand, 6115932 - 6115983
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaatt 450  Q
    ||||||| |||||||||||||||||  || |||||||| |||||||||||||    
T  6115932 aaaatgagtgtcgtttaaggtttttacacacatattaaaaaatgcattaatt 6115983  T

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Target: chr3 (Bit Score: 76; Significance: 1e-34; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 399 - 551
Target Start/End: Complemental strand, 30315535 - 30315382
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattg 498  Q
    |||||||||||||||||||| | ||  || ||||||||||||||||||||||          |||||||||||||| |||||||||||||||||||||||    
T  30315535 aaaatgaatgtcgtttaaggctgttacacacatattaagaaatgcattaattaagagaaagagagatgttattttaccaaattatcctaatcaactattg 30315436  T
Q  499 gtttgtcttttattaaagaaaaaataatactttagaaa-taatgtatatagtat 551  Q
    |||||| ||| |||||||||||||||||||||| |||| || ||||||||||||    
T  30315435 gtttgtttttcattaaagaaaaaataatacttttgaaagtagtgtatatagtat 30315382  T

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Target: chr3; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 399 - 547
Target Start/End: Original strand, 36844667 - 36844815
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattg 498  Q
    |||||||||||||||||||||||||  || ||||||||||||||||||||||          ||||| |||||||| |||||||||||||||||||||||    
T  36844667 aaaatgaatgtcgtttaaggtttttagacacatattaagaaatgcattaattaacagaaagagagatattattttaccaaattatcctaatcaactattg 36844766  T
Q  499 gtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
     || || ||| ||||||||||| |||||||||| ||| || ||||||||    
T  36844767 attagtttttcattaaagaaaacataatactttggaagtagtgtatata 36844815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 461 - 551
Target Start/End: Original strand, 9189422 - 9189512
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||||||||||||| ||||| ||| ||||||||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||||||||    
T  9189422 gagatgttattttaccaaatcatcgtaatcaactattggtttgttttttattaaagaaaaaataatattttggaagtaatgtatatagtat 9189512  T

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Target: chr3; HSP #4
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 461 - 551
Target Start/End: Original strand, 30934796 - 30934886
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||||||||||||||||||||||| ||||||| ||||||||||| ||| |||||||| ||||||||||||||||| || ||||||||||||    
T  30934796 gagatgttattttatcaaattatcataatcaaatattggtttgtttttcattaaagataaaataatactttagaagtagtgtatatagtat 30934886  T

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Target: chr3; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 469 - 543
Target Start/End: Original strand, 13756867 - 13756941
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgta 543  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||    
T  13756867 attttagcaaattatcctaatcaactattggtttgttttttattaaagaaaaaataatactttaaaagtaatgta 13756941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 31853556 - 31853618
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31853556 attttatcaaattatcctaatcaactattggtttgtctttcattaaagaaaaaataatacttt 31853618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 469 - 535
Target Start/End: Complemental strand, 39359076 - 39359010
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaa 535  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  39359076 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttagaa 39359010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 461 - 546
Target Start/End: Complemental strand, 19373749 - 19373664
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatat 546  Q
    |||||||||||||| |||||| |||||||||||||||||||||| ||| |||||||||||||||| ||||| ||| || |||||||    
T  19373749 gagatgttattttaccaaattctcctaatcaactattggtttgtttttcattaaagaaaaaataaaactttggaagtagtgtatat 19373664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 389 - 550
Target Start/End: Original strand, 7230809 - 7230969
Alignment:
Q  389 cctcaattttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaa 488  Q
    |||| |||||||||||||||||||||||| |||||  || |||||||||||||| ||||||           |||||| |||||||  ||||||||||||    
T  7230809 cctctattttaaaatgaatgtcgtttaagatttttacacacatattaagaaatgaattaataaaaataaagagagatgatattttagtaaattatcctaa 7230908  T
Q  489 tcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagta 550  Q
    |||||||||||||| | | | ||||||| |||||||||| ||| ||| || |||||||||||    
T  7230909 tcaactattggtttctttctcattaaag-aaaaataataatttcgaagtagtgtatatagta 7230969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 469 - 543
Target Start/End: Original strand, 23525310 - 23525384
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgta 543  Q
    |||||| ||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||| ||| |||||||    
T  23525310 attttaccaaattatcataatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtaatgta 23525384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 461 - 551
Target Start/End: Complemental strand, 38141113 - 38141023
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||||||||||||| |||||||| |||||||| ||||||||||| ||| |||||||||||||| ||| ||| ||| || ||||||||||||    
T  38141113 gagatgttattttaccaaattattctaatcaattattggtttgtttttcattaaagaaaaaattatattttggaagtagtgtatatagtat 38141023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 399 - 547
Target Start/End: Complemental strand, 42072210 - 42072062
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattg 498  Q
    |||||||||||||| ||| ||||||  || |||||||||||||  |||||||          || |||||||||||  |||||||| |||||||||||||    
T  42072210 aaaatgaatgtcgtataatgtttttacacacatattaagaaatatattaattaaaagaaagagatatgttattttactaaattatcataatcaactattg 42072111  T
Q  499 gtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
     ||||| ||  ||||||||||| |||||||||||||| |||||||||||    
T  42072110 atttgttttccattaaagaaaacataatactttagaagtaatgtatata 42072062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 44676377 - 44676315
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  44676377 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatacttt 44676315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 395 - 551
Target Start/End: Complemental strand, 48903515 - 48903359
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaact 494  Q
    |||| |||||| ||||||||||| |||||  |  ||||||||||||||||||||||          || || |||||||||||||||||  |||||||||    
T  48903515 tttttaaatgagtgtcgtttaagttttttacatacatattaagaaatgcattaattaaaagaaagagatatattattttatcaaattattttaatcaact 48903416  T
Q  495 attggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||| ||||| ||| |||||||||||||||||||| |  || || ||||||||||||    
T  48903415 attgctttgtttttaattaaagaaaaaataatactatgaaattagtgtatatagtat 48903359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 462 - 551
Target Start/End: Complemental strand, 40487990 - 40487901
Alignment:
Q  462 agatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    ||||||||||||||||||||||  ||||||||||||  ||||| |||   |||||||||||||||||||||||| || ||||||||||||    
T  40487990 agatgttattttatcaaattattataatcaactattaatttgtttttcgataaagaaaaaataatactttagaagtagtgtatatagtat 40487901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 461 - 552
Target Start/End: Complemental strand, 8817304 - 8817213
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtata 552  Q
    |||| |||||||||||||||||| |||||||||||||| ||| | ||| ||||||||||||||||||| |||||| || ||| |||| ||||    
T  8817304 gagacgttattttatcaaattattctaatcaactattgatttatttttcattaaagaaaaaataatacattagaagtagtgtgtataatata 8817213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 11393701 - 11393639
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||||||||||||||||||||||||||| |||||  || ||||||||||||||||||||||    
T  11393701 attttatcaaattatcctaatcaactattgatttgttattaattaaagaaaaaataatacttt 11393639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 543
Target Start/End: Original strand, 33194025 - 33194099
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgta 543  Q
    |||||| ||||||||| ||||||||||||| ||||| ||| |||||||||||||||||||||| ||| |||||||    
T  33194025 attttaccaaattatcataatcaactattgatttgtttttcattaaagaaaaaataatactttggaagtaatgta 33194099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 38016530 - 38016468
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| |||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  38016530 attttaccaaattatcctaatcaactattagtttgtttttcattaaagaaaaaataatacttt 38016468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 543
Target Start/End: Original strand, 41287490 - 41287564
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgta 543  Q
    |||||| ||||||||||||||||||||||||||| | ||| ||||||||||||| |||||||| ||| |||||||    
T  41287490 attttaccaaattatcctaatcaactattggtttctttttcattaaagaaaaaaaaatactttggaagtaatgta 41287564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 543
Target Start/End: Original strand, 47895338 - 47895412
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgta 543  Q
    |||||| |||||||||||||||||||||| |||||  ||| |||||||||||||||||||||| |||||| ||||    
T  47895338 attttaccaaattatcctaatcaactatttgtttgcttttcattaaagaaaaaataatactttggaaatagtgta 47895412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 395 - 521
Target Start/End: Complemental strand, 27067828 - 27067710
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaact 494  Q
    ||||||||||| |||||||||||||||||  || || |||||||||||||||||||           |||||||| |||| |||||||||||||||||||    
T  27067828 ttttaaaatgagtgtcgtttaaggttttt--acacacattaagaaatgcattaattaaaaaa-----agatgttaatttaccaaattatcctaatcaact 27067736  T
Q  495 attggtttgtcttttattaaagaaaaa 521  Q
    |||||||||| ||| ||||||||||||    
T  27067735 attggtttgt-tttcattaaagaaaaa 27067710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 469 - 551
Target Start/End: Complemental strand, 45566955 - 45566872
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgt-atatagtat 551  Q
    |||||| |||||||||||||||||| |||||||||| ||| ||||||||||||| |||| |||| || |||||| |||||||||    
T  45566955 attttaccaaattatcctaatcaaccattggtttgtttttcattaaagaaaaaacaatattttaaaagtaatgtaatatagtat 45566872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 45213716 - 45213778
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| |||||||| |||||||||||||||||||  ||| ||||||||||||||||||||||    
T  45213716 attttaccaaattattctaatcaactattggtttgcttttcattaaagaaaaaataatacttt 45213778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 466 - 544
Target Start/End: Complemental strand, 50346783 - 50346705
Alignment:
Q  466 gttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtat 544  Q
    ||||||||||||||||||| |||| |||||||| ||||| ||| ||||||||||||||||||  || ||| ||||||||    
T  50346783 gttattttatcaaattatcttaattaactattgatttgtttttcattaaagaaaaaataatatgttggaagtaatgtat 50346705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 461 - 522
Target Start/End: Original strand, 40717657 - 40717717
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaa 522  Q
    |||||||||||||| ||||||||| ||||||||||||||||||| ||| |||||||||||||    
T  40717657 gagatgttattttaccaaattatcttaatcaactattggtttgt-tttcattaaagaaaaaa 40717717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 471 - 531
Target Start/End: Original strand, 50088312 - 50088372
Alignment:
Q  471 tttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||| ||||||||| ||||||||||||||||||| ||| |||||||||||| |||||||||    
T  50088312 tttaccaaattatcataatcaactattggtttgtttttcattaaagaaaaattaatacttt 50088372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 30431276 - 30431214
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| |||||||||||||||||||||||  |||| ||| |||| |||||||||||||||||    
T  30431276 attttaccaaattatcctaatcaactattgacttgtttttcattagagaaaaaataatacttt 30431214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 527
Target Start/End: Original strand, 32492176 - 32492233
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataata 527  Q
    |||||||||||||||||||||||| ||||| ||| | ||||||||||||||||||||||    
T  32492176 attttatcaaattatcctaatcaattattgattt-ttttttattaaagaaaaaataata 32492233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 481 - 531
Target Start/End: Original strand, 35557764 - 35557814
Alignment:
Q  481 tatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||||||||||||||||||| | ||| ||||||||||||||||||||||    
T  35557764 tatcctaatcaactattggtttatttttcattaaagaaaaaataatacttt 35557814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 36460961 - 36460900
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||||||||| ||| || |||| ||||||||||||||    
T  36460961 attttaccaaattatcctaatcaactattggtttgtttttcatcaaag-aaaaataatacttt 36460900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 38363947 - 38363885
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| |||||||||||||| |||  ||||||||| ||| ||||||||||||||||||||||    
T  38363947 attttaccaaattatcctaataaaccgttggtttgtttttcattaaagaaaaaataatacttt 38363885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 395 - 504
Target Start/End: Original strand, 47823339 - 47823446
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaact 494  Q
    |||||||||||| || ||||||||||||| ||| |||||||| ||||| |||||||          |||||||||||| | ||||| |||||||||||||    
T  47823339 ttttaaaatgaacgttgtttaaggtttttatacacatattaaaaaatgtattaatt--aaaagaaagagatgttatttaaccaaataatcctaatcaact 47823436  T
Q  495 attggtttgt 504  Q
    ||||||||||    
T  47823437 attggtttgt 47823446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 527
Target Start/End: Complemental strand, 51398166 - 51398108
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataata 527  Q
    |||||| ||||||||||||||||||||||| ||| | ||| ||||||||||||||||||    
T  51398166 attttaccaaattatcctaatcaactattgatttatttttcattaaagaaaaaataata 51398108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 469 - 522
Target Start/End: Complemental strand, 41850537 - 41850485
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaa 522  Q
    |||||| ||||||||||||||||||||||||||||| ||| |||||||||||||    
T  41850537 attttaccaaattatcctaatcaactattggtttgt-tttcattaaagaaaaaa 41850485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 469 - 529
Target Start/End: Complemental strand, 39168862 - 39168802
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatact 529  Q
    ||||||||||||||||||||| |||||||  ||||| ||| |||||| |||||||||||||    
T  39168862 attttatcaaattatcctaattaactattaatttgtttttcattaaaaaaaaaataatact 39168802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 395 - 450
Target Start/End: Complemental strand, 31190705 - 31190650
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaatt 450  Q
    |||||||||||||||||||||||||||||  |  |||||||||||||| |||||||    
T  31190705 ttttaaaatgaatgtcgtttaaggtttttacatacatattaagaaatgtattaatt 31190650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 469 - 528
Target Start/End: Original strand, 33024294 - 33024353
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatac 528  Q
    |||||||||||||||| ||||||||||||| ||||| ||  ||||||||| |||||||||    
T  33024294 attttatcaaattatcttaatcaactattgatttgttttccattaaagaagaaataatac 33024353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 400 - 450
Target Start/End: Original strand, 40717298 - 40717348
Alignment:
Q  400 aaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaatt 450  Q
    ||||||| ||||||||||||||||  || ||||||||||||||||||||||    
T  40717298 aaatgaacgtcgtttaaggtttttacacacatattaagaaatgcattaatt 40717348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 45518478 - 45518540
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||||||||||||||||||||| ||||| | | | ||| |||||||||||| |||||||||    
T  45518478 attttatcaaattatcctaatcaattattgatatatttttcattaaagaaaaattaatacttt 45518540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 53200675 - 53200737
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| |||||||||||||||||||||| |||||  ||| ||||| ||||||||| ||||||    
T  53200675 attttaccaaattatcctaatcaactattagtttgcttttcattaaggaaaaaatagtacttt 53200737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 522
Target Start/End: Complemental strand, 2458164 - 2458111
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaa 522  Q
    |||||| |||||||||||||||||||||||||||   ||| |||||||||||||    
T  2458164 attttaccaaattatcctaatcaactattggtttaattttcattaaagaaaaaa 2458111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 522
Target Start/End: Original strand, 30426317 - 30426370
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaa 522  Q
    |||||| ||||||||| ||||||||||||||||||| ||| ||| |||||||||    
T  30426317 attttaccaaattatcttaatcaactattggtttgtttttcattgaagaaaaaa 30426370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 522
Target Start/End: Complemental strand, 47138121 - 47138068
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaa 522  Q
    |||||| ||||||||||||||||| |||| |||||| ||| |||||||||||||    
T  47138121 attttaccaaattatcctaatcaattattcgtttgtttttcattaaagaaaaaa 47138068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 486 - 551
Target Start/End: Complemental strand, 48901858 - 48901793
Alignment:
Q  486 taatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||| |  || || ||||||||||||    
T  48901858 taatcaactattgctttgtttttaattaaagaaaaaataatactatgaaattagtgtatatagtat 48901793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 387 - 450
Target Start/End: Original strand, 11017006 - 11017070
Alignment:
Q  387 tccctcaattttaaaatgaatgtcgtttaa-ggtttttctacccatattaagaaatgcattaatt 450  Q
    |||||| ||||||||||||||||| ||||| | ||||||||  |||||||| |||||||||||||    
T  11017006 tccctccattttaaaatgaatgtcttttaatgttttttctatacatattaataaatgcattaatt 11017070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 469 - 509
Target Start/End: Original strand, 36729766 - 36729806
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtctttt 509  Q
    |||||| ||||||||||||||||||||||||||||| ||||    
T  36729766 attttaccaaattatcctaatcaactattggtttgtttttt 36729806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 491 - 543
Target Start/End: Original strand, 36729826 - 36729878
Alignment:
Q  491 aactattggtttgtcttttattaaagaaaaaataatactttagaaataatgta 543  Q
    |||||||||||||| ||| |||||| ||||||||||||||| ||| |||||||    
T  36729826 aactattggtttgtttttcattaaataaaaaataatactttggaagtaatgta 36729878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 395 - 450
Target Start/End: Complemental strand, 48901936 - 48901881
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaatt 450  Q
    ||||||||||| ||||||||||| |||||  |  ||||||||||||||||||||||    
T  48901936 ttttaaaatgagtgtcgtttaagttttttacatacatattaagaaatgcattaatt 48901881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 394 - 444
Target Start/End: Original strand, 11337542 - 11337592
Alignment:
Q  394 attttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgca 444  Q
    |||| |||||||||||||||||||||||||  || ||||||| ||||||||    
T  11337542 atttcaaaatgaatgtcgtttaaggtttttacacacatattatgaaatgca 11337592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 387 - 440
Target Start/End: Complemental strand, 4759517 - 4759464
Alignment:
Q  387 tccctcaattttaaaatgaatgtcgtttaaggtttttctacccatattaagaaa 440  Q
    |||||| |||||||||||| |||||||| |||| ||| ||| ||||||||||||    
T  4759517 tccctccattttaaaatgagtgtcgttttaggtgtttatacacatattaagaaa 4759464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 547
Target Start/End: Complemental strand, 22857208 - 22857167
Alignment:
Q  506 ttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
    |||||||||||||||||||||| ||||||| || ||||||||    
T  22857208 ttttattaaagaaaaaataatattttagaagtagtgtatata 22857167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 4e-34; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 399 - 551
Target Start/End: Original strand, 26594995 - 26595147
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattg 498  Q
    |||||||||||||||||||||||||  || ||||||||||||| ||||||||          |||||||||||||| ||||||||||||||||| |||||    
T  26594995 aaaatgaatgtcgtttaaggtttttacacacatattaagaaatacattaattaaaagaaagagagatgttattttaccaaattatcctaatcaattattg 26595094  T
Q  499 gtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||||| ||| |||||||||||| |||| |||| |||||| ||||||||||||    
T  26595095 gtttgtttttcattaaagaaaaattaattctttggaaatagtgtatatagtat 26595147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 399 - 551
Target Start/End: Complemental strand, 29568121 - 29567969
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattg 498  Q
    |||||||||||||||||||||||||  || ||||||||||||||||||||||           | ||||||||||| |||||||| ||||||||||||||    
T  29568121 aaaatgaatgtcgtttaaggtttttacacacatattaagaaatgcattaattaaaagaaagaaatatgttattttaccaaattattctaatcaactattg 29568022  T
Q  499 gtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||||| ||| |||||||||||||||||||||| ||| || ||||||||||||    
T  29568021 gtttgtttttcattaaagaaaaaataatactttggaagtagtgtatatagtat 29567969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 395 - 547
Target Start/End: Original strand, 8894937 - 8895089
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaact 494  Q
    ||||||||||| ||||||||||| ||||| ||  ||||||||||||||||||||||          |||||||||||||| |||||||||||||||||||    
T  8894937 ttttaaaatgagtgtcgtttaagatttttatatacatattaagaaatgcattaattaaaagaaagagagatgttattttaccaaattatcctaatcaact 8895036  T
Q  495 attggtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
    |||| ||||| ||| |||||| ||||||||||| |||  ||||| ||||||||    
T  8895037 attgatttgtttttcattaaaaaaaaaataatattttgaaaatagtgtatata 8895089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 387 - 551
Target Start/End: Original strand, 25560786 - 25560950
Alignment:
Q  387 tccctcaattttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcct 486  Q
    |||||| |||| |||||||||||||||||  ||||||  ||  |||||||||||| ||||||||          |||||||||||||| ||||||||| |    
T  25560786 tccctctatttcaaaatgaatgtcgtttagagtttttacacatatattaagaaatacattaattaaaagaaagagagatgttattttaccaaattatcat 25560885  T
Q  487 aatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    ||||||||||| |||||| ||| |||||||||||||||||| ||| ||| || ||||||||||||    
T  25560886 aatcaactattagtttgtttttcattaaagaaaaaataatattttggaagtagtgtatatagtat 25560950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 461 - 551
Target Start/End: Original strand, 31699277 - 31699367
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||||||||||||| ||||||||| ||||||||||||||||||| ||| |||||||||||||||||| ||| ||| |||||| ||||||||    
T  31699277 gagatgttattttaccaaattatcataatcaactattggtttgtttttcattaaagaaaaaataatattttggaagtaatgtttatagtat 31699367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 464 - 547
Target Start/End: Complemental strand, 27209149 - 27209066
Alignment:
Q  464 atgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||| ||| || ||||||||    
T  27209149 atgttattttaccaaattatcctaatcaactattgatttgtttttcattaaagaaaaaataatactttggaagtagtgtatata 27209066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 397 - 527
Target Start/End: Original strand, 8989563 - 8989693
Alignment:
Q  397 ttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactat 496  Q
    ||||||| ||||||| |||| ||||||  || ||||||||||||||||||||||           ||||||||||||| ||||||||  |||||||||||    
T  8989563 ttaaaataaatgtcgattaaagtttttacacacatattaagaaatgcattaattaaaagaaagaaagatgttattttaccaaattattataatcaactat 8989662  T
Q  497 tggtttgtcttttattaaagaaaaaataata 527  Q
    |||||||| ||| ||||||||||||||||||    
T  8989663 tggtttgtttttcattaaagaaaaaataata 8989693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 394 - 516
Target Start/End: Original strand, 44556990 - 44557112
Alignment:
Q  394 attttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaac 493  Q
    |||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||          || ||||||||||| ||||||||| |||| |||    
T  44556990 attttaaaatgaatgtcgtttaaggtttttatacacatattaaaaaatgcattaattaaaagaaagagaaatgttattttaccaaattatcttaataaac 44557089  T
Q  494 tattggtttgtcttttattaaag 516  Q
    | ||||||||| ||| |||||||    
T  44557090 tgttggtttgtttttcattaaag 44557112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 34110683 - 34110621
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  34110683 atttaatcaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatacttt 34110621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 470 - 551
Target Start/End: Original strand, 46286814 - 46286896
Alignment:
Q  470 ttttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgt-atatagtat 551  Q
    ||||| ||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||| ||||| ||| |||||||||    
T  46286814 ttttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaatgatactttaaaaatagtgtaatatagtat 46286896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 461 - 551
Target Start/End: Complemental strand, 28538368 - 28538277
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaa-aaaataatactttagaaataatgtatatagtat 551  Q
    |||||||||||||| ||||||||| ||||||||||||||||| | ||| ||||||||| |||||||||| ||  ||||| ||||||||||||    
T  28538368 gagatgttattttaccaaattatcataatcaactattggtttatttttcattaaagaaaaaaataatacattgaaaatagtgtatatagtat 28538277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 469 - 551
Target Start/End: Original strand, 49468706 - 49468789
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgt-atatagtat 551  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||| ||| || ||| |||||||||    
T  49468706 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatcctttggaagtagtgtaatatagtat 49468789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 15823190 - 15823128
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| |||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||    
T  15823190 attttaccaaattatcctaatcaactaatggtttgtttttcattaaagaaaaaataatacttt 15823128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 395 - 547
Target Start/End: Original strand, 18794464 - 18794616
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaact 494  Q
    ||||||||||||||||||||||  |||||  || |||||||| |||||||||||||           | ||||||||||| |||||||| ||||||||||    
T  18794464 ttttaaaatgaatgtcgtttaatatttttacacacatattaataaatgcattaattaaaagaaagaaatatgttattttaccaaattattctaatcaact 18794563  T
Q  495 attggtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
    ||| |||||| ||  ||||||||||||| |||| ||| ||| || ||||||||    
T  18794564 attagtttgttttccattaaagaaaaaagaatattttggaagtagtgtatata 18794616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 32806933 - 32806995
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| | ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  32806933 attttaccgaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatacttt 32806995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 48009166 - 48009104
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||    
T  48009166 attttaccaaattatcctaatcaactattggtttgtttttcaataaagaaaaaataatacttt 48009104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 477 - 529
Target Start/End: Original strand, 38530842 - 38530894
Alignment:
Q  477 aaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatact 529  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  38530842 aaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatact 38530894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 461 - 551
Target Start/End: Original strand, 7191194 - 7191285
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaag-aaaaaataatactttagaaataatgtatatagtat 551  Q
    |||||||||||||| |||||||||||||||||||||| |||| | |||  |||||| ||||||||||| |||| || || ||||||||||||    
T  7191194 gagatgttattttaccaaattatcctaatcaactatttgtttatttttcgttaaagaaaaaaataatattttaaaagtagtgtatatagtat 7191285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 476 - 531
Target Start/End: Complemental strand, 9915592 - 9915537
Alignment:
Q  476 caaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||    
T  9915592 caaattatcctaatcaactattgatttgtttttcattaaagaaaaaataatacttt 9915537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 395 - 531
Target Start/End: Complemental strand, 5207 - 5072
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaact 494  Q
    |||||||||||||||| ||| ||||||||  || ||| |||| |||||||||||||           ||||||||||||| |||||||||||||||||||    
T  5207 ttttaaaatgaatgtcatttgaggtttttacacacat-ttaataaatgcattaatttaaagaaagatagatgttattttaccaaattatcctaatcaact 5109  T
Q  495 attggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||||||| |||   | | ||||||||||||||||    
T  5108 attggtttgtttttcgctgatgaaaaaataatacttt 5072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 394 - 545
Target Start/End: Original strand, 2610757 - 2610902
Alignment:
Q  394 attttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaac 493  Q
    ||||||||||||||||||||||| |||||| ||| ||||||||||||| ||||||||           | ||||||||||| ||| |||||||||||||     
T  2610757 attttaaaatgaatgtcgtttaaagtttttatacacatattaagaaattcattaattaaaaaat----aaatgttattttaccaagttatcctaatcaat 2610852  T
Q  494 tattggtttgtcttttattaaagaaaaaataatactttagaaataatgtata 545  Q
    | ||||||| | ||| |||||  ||||||||||||||| ||| || ||||||    
T  2610853 tgttggtttatttttcattaa--aaaaaataatactttggaagtagtgtata 2610902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 469 - 527
Target Start/End: Complemental strand, 5463731 - 5463673
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataata 527  Q
    |||||| ||||| ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  5463731 attttaccaaataatcctaatcaactattggtttgtttttcattaaagaaaaaataata 5463673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 10842936 - 10842874
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||| |||||||||||| |||||| ||| ||||||||||||||||||||||    
T  10842936 attttaccaaattatcttaatcaactattagtttgtttttcattaaagaaaaaataatacttt 10842874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 469 - 529
Target Start/End: Original strand, 52125131 - 52125191
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatact 529  Q
    |||||| |||||||| |||||||||||||||||||| ||| |||||| |||||||||||||    
T  52125131 attttaccaaattattctaatcaactattggtttgtttttcattaaacaaaaaataatact 52125191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 25151966 - 25151903
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtctttt-attaaagaaaaaataatacttt 531  Q
    |||||| |||||||| |||||||||||||||||| | |||| ||||||||||||||||||||||    
T  25151966 attttaccaaattatactaatcaactattggttttttttttcattaaagaaaaaataatacttt 25151903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 31798746 - 31798683
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaa-aaaataatacttt 531  Q
    |||||| ||||||||| ||||||||||||||||||| ||| ||||||||| |||||||||||||    
T  31798746 attttaccaaattatcttaatcaactattggtttgtttttcattaaagaaaaaaataatacttt 31798683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 461 - 531
Target Start/End: Original strand, 5225813 - 5225883
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||| ||||||||| ||||||||| |||| |||||||||||| | ||| |||||||||||| |||||||||    
T  5225813 gagaagttattttaccaaattatcataattaactattggtttatttttcattaaagaaaaagtaatacttt 5225883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 31491765 - 31491827
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||| ||||||||||||| ||||| ||| |||||||||||||| |||||||    
T  31491765 attttaccaaattatcataatcaactattgatttgtttttcattaaagaaaaaattatacttt 31491827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 48025249 - 48025311
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| |||||||||||||| ||||||| |||||| |||  |||||||||||||||||||||    
T  48025249 attttaccaaattatcctaataaactatttgtttgtttttctttaaagaaaaaataatacttt 48025311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 469 - 522
Target Start/End: Original strand, 1740635 - 1740688
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaa 522  Q
    |||||| ||||||||| |||||||||||| |||||| |||||||||||||||||    
T  1740635 attttaccaaattatcataatcaactattagtttgttttttattaaagaaaaaa 1740688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 469 - 522
Target Start/End: Complemental strand, 44108757 - 44108704
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaa 522  Q
    |||||| ||||||||||||| ||||||||||||||| ||| |||||||||||||    
T  44108757 attttaccaaattatcctaaacaactattggtttgtttttcattaaagaaaaaa 44108704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 469 - 522
Target Start/End: Complemental strand, 50094386 - 50094333
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaa 522  Q
    |||||| ||||||||||||||||||||||||||||  ||| |||||||||||||    
T  50094386 attttaccaaattatcctaatcaactattggtttgcttttcattaaagaaaaaa 50094333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 469 - 525
Target Start/End: Complemental strand, 43759488 - 43759432
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataa 525  Q
    ||||||||||||||||||||| |||||||| || || ||| ||||||||||||||||    
T  43759488 attttatcaaattatcctaattaactattgattggtttttcattaaagaaaaaataa 43759432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 461 - 544
Target Start/End: Complemental strand, 9092755 - 9092673
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtat 544  Q
    ||||||||||||| | ||||||| |||||||| ||||| ||||| ||| ||||||||||||| |||||||| ||| || |||||    
T  9092755 gagatgttattttctaaaattattctaatcaaatattgatttgtttttcattaaagaaaaaa-aatacttttgaagtagtgtat 9092673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 477 - 531
Target Start/End: Original strand, 24611522 - 24611577
Alignment:
Q  477 aaattatcctaatcaactattggtttgtcttttattaaag-aaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||    
T  24611522 aaattaccctaatcaactattggtttgtttttcattaaagaaaaaaataatacttt 24611577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 46046129 - 46046067
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||  ||||  ||| ||||||||| ||||||||||||    
T  46046129 attttaccaaattatcctaatcaactattaatttgattttcattaaagaataaataatacttt 46046067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 522
Target Start/End: Complemental strand, 15573769 - 15573716
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaa 522  Q
    |||||| |||||||||||||| | |||||||||||| ||| |||||||||||||    
T  15573769 attttaccaaattatcctaattatctattggtttgtttttcattaaagaaaaaa 15573716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 467 - 531
Target Start/End: Original strand, 46271016 - 46271081
Alignment:
Q  467 ttattttatcaaattatcctaatcaac-tattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||||| || |||||| |||||||| |||| |||||| ||| ||||||||||||||||||||||    
T  46271016 ttattttaccagattatcgtaatcaacgtattagtttgtttttcattaaagaaaaaataatacttt 46271081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 506 - 551
Target Start/End: Complemental strand, 46554916 - 46554871
Alignment:
Q  506 ttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||||||||||||||||||||||||| ||| || ||||||||||||    
T  46554916 ttttattaaagaaaaaataatactttggaagtagtgtatatagtat 46554871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 467 - 531
Target Start/End: Original strand, 49900750 - 49900815
Alignment:
Q  467 ttattttatcaaattatcctaatcaactattggtttgtcttttattaaag-aaaaaataatacttt 531  Q
    ||||||||  |||||||||||||||||||||||||| | |||  |||||| |||||||||||||||    
T  49900750 ttattttactaaattatcctaatcaactattggtttatttttctttaaagaaaaaaataatacttt 49900815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 7190972 - 7191028
Alignment:
Q  389 cctcaattttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcat 445  Q
    |||| ||||||||||||||||||| ||| ||||||  || |||||||||||||||||    
T  7190972 cctctattttaaaatgaatgtcgtctaatgtttttacacacatattaagaaatgcat 7191028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 469 - 521
Target Start/End: Original strand, 49426414 - 49426466
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaa 521  Q
    |||||| |||||||||||||||||||||||||||||  || |||||| |||||    
T  49426414 attttaccaaattatcctaatcaactattggtttgttcttcattaaaaaaaaa 49426466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 387 - 450
Target Start/End: Complemental strand, 27209602 - 27209539
Alignment:
Q  387 tccctcaattttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaatt 450  Q
    |||||| |||| ||||||| ||| |||||||||||||  || |||||||| |||||||||||||    
T  27209602 tccctccatttcaaaatgagtgttgtttaaggtttttacacacatattaaaaaatgcattaatt 27209539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 395 - 444
Target Start/End: Original strand, 14373345 - 14373394
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgca 444  Q
    |||||||||||||||||||| |||| |||  || ||||||||||||||||    
T  14373345 ttttaaaatgaatgtcgttttaggtgtttacacacatattaagaaatgca 14373394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 464 - 501
Target Start/End: Original strand, 33694413 - 33694450
Alignment:
Q  464 atgttattttatcaaattatcctaatcaactattggtt 501  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  33694413 atgttattttaccaaattattctaatcaactattggtt 33694450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 522
Target Start/End: Original strand, 52066285 - 52066338
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaa 522  Q
    |||||| ||||||||| ||||||||||||| ||||| ||| |||||| ||||||    
T  52066285 attttaccaaattatcttaatcaactattgatttgtttttcattaaacaaaaaa 52066338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 3e-32; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 395 - 551
Target Start/End: Complemental strand, 28289444 - 28289287
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaact 494  Q
    |||||||||||||||||||||||||||||  || |||||||| |||| ||||||||          |||||||||||||| |||||||||||||||||||    
T  28289444 ttttaaaatgaatgtcgtttaaggtttttacacacatattaataaatacattaattaaaataaagagagatgttattttaccaaattatcctaatcaact 28289345  T
Q  495 attggtttgtcttttattaaagaa-aaaataatactttagaaataatgtatatagtat 551  Q
    |||||||||| ||| ||||||||| |||||||||||||  || || ||||||||||||    
T  28289344 attggtttgtttttcattaaagaaaaaaataatactttgaaagtagtgtatatagtat 28289287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 461 - 551
Target Start/End: Original strand, 29636214 - 29636304
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    ||||||||||||||||||||||||||||| || ||||||||||| ||| |||||||||||||||||||||||||| || ||||||||||||    
T  29636214 gagatgttattttatcaaattatcctaataaattattggtttgtttttcattaaagaaaaaataatactttagaagtagtgtatatagtat 29636304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 461 - 551
Target Start/End: Complemental strand, 21819446 - 21819356
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||||||||||||| |||||||||||||| |||||||||||||| ||| |||||||||||||||||| ||| ||| |||||||||||||||    
T  21819446 gagatgttattttaccaaattatcctaataaactattggtttgtttttcattaaagaaaaaataatattttggaagtaatgtatatagtat 21819356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 462 - 550
Target Start/End: Original strand, 47461363 - 47461450
Alignment:
Q  462 agatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagta 550  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||| | || |||||||||||    
T  47461363 agatgtcattttatcaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataat-ctttaggagtagtgtatatagta 47461450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 464 - 551
Target Start/End: Complemental strand, 10476296 - 10476209
Alignment:
Q  464 atgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||| |||| || |||||||||||| ||| || ||||||||||||    
T  10476296 atgttattttatcaaattatcctaatcaactattgatttgttttttactaaaaaataaataatactttggaagtagtgtatatagtat 10476209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 394 - 551
Target Start/End: Complemental strand, 48843785 - 48843625
Alignment:
Q  394 attttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttat--caaattatcctaatca 491  Q
    |||||||||||| |||||||||||||||||  |  |||||||||||||||| | |||          ||||||||||||||   ||||||||||||||||    
T  48843785 attttaaaatgagtgtcgtttaaggtttttacatacatattaagaaatgcactgattaaaagaaagagagatgttattttacaccaaattatcctaatca 48843686  T
Q  492 actattggtttgtcttttattaaagaa-aaaataatactttagaaataatgtatatagtat 551  Q
    ||||||||||||| ||| ||||||||| |||||||||| || ||| || ||||||||||||    
T  48843685 actattggtttgtttttcattaaagaaaaaaataatacgttggaagtagtgtatatagtat 48843625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 464 - 545
Target Start/End: Complemental strand, 40339619 - 40339538
Alignment:
Q  464 atgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtata 545  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| ||| || ||||||    
T  40339619 atgttattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaagaatactttggaagtagtgtata 40339538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 531
Target Start/End: Original strand, 6563340 - 6563477
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaact 494  Q
    ||||||||||||||||||||||  |||||   |  |||||||||||| ||||||||          || ||||||||||||||||||||||||||||||     
T  6563340 ttttaaaatgaatgtcgtttaaattttttacgcatatattaagaaatacattaattaaaagaaagagacatgttattttatcaaattatcctaatcaacc 6563439  T
Q  495 attggtttgtcttttattaaag-aaaaaataatacttt 531  Q
    |||||||||| ||| ||||||| |||||||||||||||    
T  6563440 attggtttgtttttcattaaagaaaaaaataatacttt 6563477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 464 - 547
Target Start/End: Original strand, 21752102 - 21752185
Alignment:
Q  464 atgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
    ||||||||||| |||||||| |||||||||||||||||||| ||| |||||||| |||||||||||||  ||||| ||||||||    
T  21752102 atgttattttaccaaattattctaatcaactattggtttgtttttcattaaagataaaataatactttgaaaatagtgtatata 21752185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 1742147 - 1742085
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  1742147 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatacttt 1742085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 22298152 - 22298090
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  22298152 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatacttt 22298090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 469 - 543
Target Start/End: Original strand, 23155457 - 23155530
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgta 543  Q
    |||||| ||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||||    
T  23155457 attttaccaaattatcctaatcaactattggtttgtttttcattaaa-aaaaaataatactttagaagtaatgta 23155530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 13405122 - 13405184
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||    
T  13405122 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaacaatacttt 13405184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 35777975 - 35777913
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| |||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  35777975 attttaccaaattatcctaataaactattggtttgtttttcattaaagaaaaaataatacttt 35777913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 37815880 - 37815818
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||    
T  37815880 attttaccaaattatcctaatcaactattgatttgtttttcattaaagaaaaaataatacttt 37815818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 543
Target Start/End: Original strand, 45933584 - 45933657
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgta 543  Q
    |||||||||||||||| ||||||||| ||||||||| ||| |||||| |||||||||||||||||||||| ||||    
T  45933584 attttatcaaattatcttaatcaacttttggtttgtttttcattaaa-aaaaaataatactttagaaatagtgta 45933657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 469 - 526
Target Start/End: Complemental strand, 23935577 - 23935520
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataat 526  Q
    |||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  23935577 attttaccaaattatcctaatcaactattgttttgttttttattaaagaaaaaataat 23935520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 462 - 551
Target Start/End: Original strand, 40753418 - 40753506
Alignment:
Q  462 agatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||| |||||||| |||||||| |||||||||||||||||||| ||| ||||||| ||||||||||||||  || || ||||||||||||    
T  40753418 agatattattttaccaaattattctaatcaactattggtttgtttttcattaaag-aaaaataatactttgaaagtagtgtatatagtat 40753506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 467 - 551
Target Start/End: Original strand, 19104995 - 19105079
Alignment:
Q  467 ttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||||||||||| | ||||||||||||||||| |||||  || |||||||||||||||||  |||| || |||||||||||||||    
T  19104995 ttattttatcaagtaatcctaatcaactattgatttgttcttcattaaagaaaaaataatgttttaaaagtaatgtatatagtat 19105079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 469 - 541
Target Start/End: Complemental strand, 24680284 - 24680212
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatg 541  Q
    |||||| |||||||| |||||||||||||| ||||| ||| |||||||||||||||||||||| ||| |||||    
T  24680284 attttaccaaattattctaatcaactattgatttgtttttcattaaagaaaaaataatactttggaagtaatg 24680212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 395 - 450
Target Start/End: Complemental strand, 4268961 - 4268906
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaatt 450  Q
    |||||||||||||||||||||||||||||  || ||||||||||||||||||||||    
T  4268961 ttttaaaatgaatgtcgtttaaggtttttacacacatattaagaaatgcattaatt 4268906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 476 - 531
Target Start/End: Complemental strand, 7759408 - 7759353
Alignment:
Q  476 caaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||||||||||||||||||| |||||| || |||||||||||||||||||||||    
T  7759408 caaattatcctaatcaactattagtttgttttctattaaagaaaaaataatacttt 7759353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 469 - 524
Target Start/End: Complemental strand, 10599519 - 10599464
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaata 524  Q
    |||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  10599519 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaata 10599464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 461 - 551
Target Start/End: Complemental strand, 1031318 - 1031228
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    ||||||||||  || ||||||||| ||||||||||||| ||  | |||||||||||||||||||||| ||| ||| || ||||||||||||    
T  1031318 gagatgttatcataccaaattatcataatcaactattgattctttttttattaaagaaaaaataataatttggaagtagtgtatatagtat 1031228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 462 - 531
Target Start/End: Complemental strand, 7335443 - 7335373
Alignment:
Q  462 agatgttattttatcaaattatcctaatcaactattggtttgtcttt-tattaaagaaaaaataatacttt 531  Q
    ||||||||||||| ||||||||| ||||||||| ||||||||| |||  ||||||||||||||||||||||    
T  7335443 agatgttattttaccaaattatcataatcaactgttggtttgtttttaaattaaagaaaaaataatacttt 7335373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 29530930 - 29530992
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||| ||||||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  29530930 attttaccaaatcatcctaatcaactattgatttgttttttattgaagaaaaaataatacttt 29530992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 464 - 522
Target Start/End: Complemental strand, 34012617 - 34012559
Alignment:
Q  464 atgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaa 522  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||| |||||||||||||    
T  34012617 atgttattttaccaaattatcctaatcaactattgatttgtttttcattaaagaaaaaa 34012559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 469 - 543
Target Start/End: Original strand, 45948625 - 45948699
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgta 543  Q
    |||||| ||||||||| |||||||| |||||||||| ||| |||||||||||||||||| ||| ||| |||||||    
T  45948625 attttaccaaattatcgtaatcaaccattggtttgtttttcattaaagaaaaaataatattttggaagtaatgta 45948699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 48684879 - 48684817
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||| |||| |||||| ||||| ||||||||||||||||||||||||||    
T  48684879 attttaccaaattatccttatcatctattgatttgttttttattaaagaaaaaataatacttt 48684817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 463 - 547
Target Start/End: Original strand, 8293058 - 8293142
Alignment:
Q  463 gatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
    |||||||||||| ||||||||| | ||||||||||| ||||| ||| |||| ||||||||||||| ||| ||| || ||||||||    
T  8293058 gatgttattttaccaaattatcgtgatcaactattgatttgtttttcattacagaaaaaataataatttggaagtagtgtatata 8293142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 464 - 547
Target Start/End: Original strand, 33939724 - 33939808
Alignment:
Q  464 atgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaa-taatactttagaaataatgtatata 547  Q
    ||||||||||| |||||||| |||||||||| ||||||| | ||| ||||||||||||| ||||||||| ||| || ||||||||    
T  33939724 atgttattttaccaaattattctaatcaactgttggtttatttttcattaaagaaaaaagtaatactttggaattagtgtatata 33939808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 401 - 522
Target Start/End: Original strand, 45499751 - 45499873
Alignment:
Q  401 aatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnnga-gatgttattttatcaaattatcctaatcaactattgg 499  Q
    |||||| |||||||||| |||||  || ||||||||||||| ||||||||          || |||| ||||||| |||||||||||||| |||||||||    
T  45499751 aatgaaggtcgtttaagctttttacacacatattaagaaatacattaattaaaataaagagatgatgctattttaccaaattatcctaattaactattgg 45499850  T
Q  500 tttgtcttttattaaagaaaaaa 522  Q
    ||||| ||| |||||||||||||    
T  45499851 tttgtttttcattaaagaaaaaa 45499873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 531
Target Start/End: Original strand, 31418515 - 31418570
Alignment:
Q  476 caaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    ||||||||||||||||||||||  ||||| ||| ||||||||||||||||||||||    
T  31418515 caaattatcctaatcaactattaatttgtttttaattaaagaaaaaataatacttt 31418570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 469 - 535
Target Start/End: Complemental strand, 44453289 - 44453225
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaa 535  Q
    |||||| |||||||||||||||| |||||||||||| ||| |||||  |||||||||||||||||||    
T  44453289 attttaccaaattatcctaatcacctattggtttgtttttcattaa--aaaaaataatactttagaa 44453225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 42879929 - 42879991
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||| |||||||||||| |||||| ||| ||||||||||||||||| ||||    
T  42879929 attttaccaaattatcgtaatcaactattagtttgtttttcattaaagaaaaaataattcttt 42879991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 461 - 549
Target Start/End: Original strand, 24780306 - 24780395
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaa-ataatactttagaaataatgtatatagt 549  Q
    ||||||||||||||  |||||||||||||| ||||||||||| | ||| ||||||||||||  |||||||||  || || ||||||||||    
T  24780306 gagatgttattttactaaattatcctaatctactattggtttatttttaattaaagaaaaacgtaatactttgaaattagtgtatatagt 24780395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 461 - 527
Target Start/End: Complemental strand, 25055945 - 25055879
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataata 527  Q
    |||||||||||||| || |||||| ||||  ||||||| ||||| ||| ||||||||||||||||||    
T  25055945 gagatgttattttaccacattatcataatttactattgatttgtttttcattaaagaaaaaataata 25055879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 27935923 - 27935861
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||| | |||| |||||||| ||||| ||| ||||||||||||||||||||||    
T  27935923 attttaccaaattagcttaattaactattgatttgtttttcattaaagaaaaaataatacttt 27935861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 477 - 523
Target Start/End: Original strand, 27947504 - 27947550
Alignment:
Q  477 aaattatcctaatcaactattggtttgtcttttattaaagaaaaaat 523  Q
    |||||||||||||||||||||| ||||| ||| ||||||||||||||    
T  27947504 aaattatcctaatcaactattgatttgtttttcattaaagaaaaaat 27947550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 399 - 531
Target Start/End: Complemental strand, 37491012 - 37490880
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattg 498  Q
    ||||| |||||||||||||||||||  || |||||||||||||| |||||||          ||  || ||||||| ||||||||| |||| |||||||     
T  37491012 aaaataaatgtcgtttaaggtttttacacacatattaagaaatgaattaattagaaaaaaa-gatgtgatattttaccaaattatcttaataaactatta 37490914  T
Q  499 gtttgtcttttattaaagaa-aaaataatacttt 531  Q
    |||||| ||| ||||||||| |||||||||||||    
T  37490913 gtttgtttttcattaaagaaaaaaataatacttt 37490880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 465 - 527
Target Start/End: Complemental strand, 47187811 - 47187749
Alignment:
Q  465 tgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataata 527  Q
    |||||||||| ||||||||||| || || ||||| | ||| ||||||||||||||||||||||    
T  47187811 tgttattttaccaaattatccttattaattattgatatgttttttattaaagaaaaaataata 47187749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 464 - 529
Target Start/End: Original strand, 19303385 - 19303450
Alignment:
Q  464 atgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatact 529  Q
    |||||||||||  |||||||| |||||||| |||||||| | ||| ||||||||||| ||||||||    
T  19303385 atgttattttactaaattatcataatcaaccattggtttatttttcattaaagaaaatataatact 19303450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 397 - 450
Target Start/End: Complemental strand, 30312762 - 30312709
Alignment:
Q  397 ttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaatt 450  Q
    |||||||||||||||||||||||||||  ||  ||||||| |||||||||||||    
T  30312762 ttaaaatgaatgtcgtttaaggtttttacacatatattaaaaaatgcattaatt 30312709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 467 - 531
Target Start/End: Complemental strand, 31196725 - 31196663
Alignment:
Q  467 ttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    ||||||||||||||||||  |||||||||||| ||  | |||| |||||||||||||||||||||    
T  31196725 ttattttatcaaattatcacaatcaactattgatt--tatttttttaaagaaaaaataatacttt 31196663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 395 - 444
Target Start/End: Complemental strand, 42286127 - 42286078
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgca 444  Q
    |||||||||||||||||||||||||||||  |  ||||||||||||||||    
T  42286127 ttttaaaatgaatgtcgtttaaggtttttacaaacatattaagaaatgca 42286078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 462 - 527
Target Start/End: Original strand, 24133117 - 24133184
Alignment:
Q  462 agatgttattttatcaaattatcctaatcaact--attggtttgtcttttattaaagaaaaaataata 527  Q
    |||| |||||||| |||||||| ||||||||||  |||| ||||| ||| ||||||||||||||||||    
T  24133117 agatattattttaccaaattatactaatcaactgtattgatttgtttttcattaaagaaaaaataata 24133184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 469 - 525
Target Start/End: Complemental strand, 36808090 - 36808034
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataa 525  Q
    |||||||||||||| || ||||||||||||  |||| ||| ||||||||||||||||    
T  36808090 attttatcaaattacccgaatcaactattgagttgtttttcattaaagaaaaaataa 36808034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 484 - 547
Target Start/End: Complemental strand, 42753845 - 42753784
Alignment:
Q  484 cctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
    ||||||||||||||||||| | ||| ||||||  ||||||||||||||| ||||| ||||||||    
T  42753845 cctaatcaactattggtttatttttcattaaa--aaaaataatactttaaaaatagtgtatata 42753784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 522
Target Start/End: Complemental strand, 41137884 - 41137832
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaa 522  Q
    |||||| |||||||||||||||||||| |||||||  ||| |||||||||||||    
T  41137884 attttaccaaattatcctaatcaactactggtttg-atttcattaaagaaaaaa 41137832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 3e-32; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 399 - 551
Target Start/End: Complemental strand, 47817964 - 47817811
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattg 498  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||          |||||||||||||| ||| ||||| |||||||||||||    
T  47817964 aaaatgaatgtcgtttaagttttttatacacatattaagaaatgcattaattaaaagaaagagagatgttattttaccaatttatcataatcaactattg 47817865  T
Q  499 gtttgtcttttattaaagaa-aaaataatactttagaaataatgtatatagtat 551  Q
    |||||| ||| ||||||||| ||||||||||||| ||| || ||||||||||||    
T  47817864 gtttgtttttcattaaagaaaaaaataatactttggaagtagtgtatatagtat 47817811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 395 - 547
Target Start/End: Original strand, 6991190 - 6991342
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaact 494  Q
    ||||||||||||| ||||| ||||||||| ||| ||||||||||||||||||||||          || || ||||| || |||||||||||| ||||||    
T  6991190 ttttaaaatgaatttcgttcaaggtttttatacacatattaagaaatgcattaattaaaagaaagagatattttattataccaaattatcctagtcaact 6991289  T
Q  495 attggtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
    |||||||| | ||||||||||||||||||||||||||  ||||| ||||||||    
T  6991290 attggtttattttttattaaagaaaaaataatactttgaaaatagtgtatata 6991342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 399 - 551
Target Start/End: Complemental strand, 30261484 - 30261332
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattg 498  Q
    ||||||||| |||||||| ||||||  || ||||||||||||| ||||||||          |||||||||||||| ||||||||  |||||||||||||    
T  30261484 aaaatgaatatcgtttaaagtttttacacacatattaagaaatacattaatttaaagaaagagagatgttattttaccaaattattttaatcaactattg 30261385  T
Q  499 gtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||||| ||| ||||||||||||||||||||||  || |||||||||||||||    
T  30261384 gtttgtttttcattaaagaaaaaataatactttgaaagtaatgtatatagtat 30261332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 399 - 552
Target Start/End: Original strand, 19451136 - 19451289
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattg 498  Q
    ||||||||||| |||||| ||||||  || ||||||||||||||||||||||          |||||||||||||| |||| || ||||||||| |||||    
T  19451136 aaaatgaatgttgtttaaagtttttacacacatattaagaaatgcattaattaaaagaaagagagatgttattttaccaaaatagcctaatcaattattg 19451235  T
Q  499 gtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtata 552  Q
    |||||| ||| |||||||||||||||||||||| ||| || |||||||| ||||    
T  19451236 gtttgtttttcattaaagaaaaaataatactttggaagtagtgtatatactata 19451289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 395 - 522
Target Start/End: Complemental strand, 44061223 - 44061096
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaact 494  Q
    ||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||           |||||||||||||  |||||||| |||||||||    
T  44061223 ttttaaaatgaatgtcgtttaaggtttttatacacgtattaagaaatgcattaattaagagaaaaatagatgttattttactaaattatcataatcaact 44061124  T
Q  495 attggtttgtcttttattaaagaaaaaa 522  Q
    |||||||||| ||| |||||| ||||||    
T  44061123 attggtttgtttttcattaaataaaaaa 44061096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 461 - 551
Target Start/End: Original strand, 10573148 - 10573238
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||||||||||||| ||||||||||||||||||||||| ||||  ||| ||||| |||||||||||||||| ||| || ||||||||||||    
T  10573148 gagatgttattttaccaaattatcctaatcaactattgatttgattttcattaatgaaaaaataatactttggaagtattgtatatagtat 10573238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 461 - 551
Target Start/End: Complemental strand, 52162267 - 52162177
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||| ||| |||||||||||||||||||||| ||| || ||||| ||||||    
T  52162267 gagatgttattttaccaaattatcttaatcaaatattggtttgtttttcattaaagaaaaaataatactttggaactagtgtatttagtat 52162177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 394 - 527
Target Start/End: Complemental strand, 41496435 - 41496302
Alignment:
Q  394 attttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaac 493  Q
    |||||||||||||| |||||||||||||||  || |||||||| ||||| |||||||          || ||||||||| | ||||||||||||||||||    
T  41496435 attttaaaatgaatatcgtttaaggtttttacacacatattaaaaaatgtattaattaaaagaaatagaaatgttatttcaccaaattatcctaatcaac 41496336  T
Q  494 tattggtttgtcttttattaaagaaaaaataata 527  Q
    |||| |||||| ||||||| ||||| ||||||||    
T  41496335 tatttgtttgttttttattgaagaataaataata 41496302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 464 - 547
Target Start/End: Complemental strand, 50203234 - 50203151
Alignment:
Q  464 atgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
    ||||||||| | ||||||||| ||||||||||||| ||||| ||| |||||||||||||||||||||| ||| |||||||||||    
T  50203234 atgttatttcaccaaattatcataatcaactattgatttgtttttcattaaagaaaaaataatacttttgaagtaatgtatata 50203151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 469 - 535
Target Start/End: Complemental strand, 50623240 - 50623173
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaa-aaaataatactttagaa 535  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||    
T  50623240 attttatcaaattatcctaatcaactattggtttgtttttcattaaagaaaaaaataatactttagaa 50623173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 19878804 - 19878742
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  19878804 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatacttt 19878742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 28734754 - 28734692
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||    
T  28734754 attttatcaaattatcctaatcaattattggtttgtttttcattaaagaaaaaataatacttt 28734692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 52957791 - 52957853
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  52957791 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatacttt 52957853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 462 - 551
Target Start/End: Original strand, 47458381 - 47458469
Alignment:
Q  462 agatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    ||||||||||||| |||||||||||||||||||||  |||||| |||  |||||| ||||||||||||||| || |||||||||||||||    
T  47458381 agatgttattttaccaaattatcctaatcaactatatgtttgtttttcgttaaag-aaaaataatactttaaaagtaatgtatatagtat 47458469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 395 - 547
Target Start/End: Original strand, 34413474 - 34413627
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaact 494  Q
    |||||||||||| ||||||||| |||||| ||| || |||||||||||| ||||||          || |||||||||||  ||||||| ||||||||||    
T  34413474 ttttaaaatgaacgtcgtttaatgtttttatacacaaattaagaaatgcgttaattaaaagaaagagaaatgttattttactaaattatgctaatcaact 34413573  T
Q  495 attggtttgtcttttattaaag-aaaaaataatactttagaaataatgtatata 547  Q
    |||||||  | ||| ||||||| ||||||||||| ||||||| || ||||||||    
T  34413574 attggttcttttttcattaaagaaaaaaataatattttagaagtagtgtatata 34413627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 37654566 - 37654503
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtctttt-attaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  37654566 attttaccaaattatcctaatcaactattggtttgttttttcattaaagaaaaaataatacttt 37654503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 464 - 531
Target Start/End: Original strand, 46392059 - 46392126
Alignment:
Q  464 atgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||| |||||| ||||||||||||||||||||||||||||| || ||||||| |||||||||||||||    
T  46392059 atgtaattttaccaaattatcctaatcaactattggtttgttttctattaaataaaaaataatacttt 46392126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 2728399 - 2728461
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||    
T  2728399 attttaccaaattatcctaatcaactattggtgtgtttttcattaaagaaaaaataatacttt 2728461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 20448195 - 20448133
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  20448195 attttaccaaattatcctaatcaactattggtttgattttcattaaagaaaaaataatacttt 20448133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 40345348 - 40345410
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||    
T  40345348 attttaccaaattatcctaatcaactattggtttgttttttattaaagaaaatacaatacttt 40345410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 41920310 - 41920372
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| |||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  41920310 attttaccaaattattctaatcaactattggtttgtttttcattaaagaaaaaataatacttt 41920372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 42605728 - 42605666
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  42605728 attttaccaaattatcttaatcaactattggtttgtttttcattaaagaaaaaataatacttt 42605666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 527
Target Start/End: Original strand, 45043589 - 45043647
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataata 527  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  45043589 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataata 45043647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 477 - 531
Target Start/End: Complemental strand, 49089611 - 49089557
Alignment:
Q  477 aaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  49089611 aaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatacttt 49089557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 52848055 - 52848117
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||    
T  52848055 attttaccaaattatcctaatcaactattggcttgtttttcattaaagaaaaaataatacttt 52848117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 54042184 - 54042246
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||||||||||||| ||||||||||||||||||| ||| |||||||||| |||||||||||    
T  54042184 attttatcaaattatcataatcaactattggtttgtttttcattaaagaaataataatacttt 54042246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 467 - 547
Target Start/End: Complemental strand, 45839795 - 45839714
Alignment:
Q  467 ttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaa-aaaataatactttagaaataatgtatata 547  Q
    |||||||| |||||||||||||||||| |||| ||||| ||| ||||||||| ||||||||||||| ||| |||||||||||    
T  45839795 ttattttaccaaattatcctaatcaacaattgatttgtttttcattaaagaaaaaaataatactttggaagtaatgtatata 45839714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 461 - 547
Target Start/End: Complemental strand, 8971206 - 8971119
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaa-aaaataatactttagaaataatgtatata 547  Q
    ||||| |||||||| ||||||||| |||| |||||||||||||| ||| ||||||||| ||||||||||||| ||| || ||||||||    
T  8971206 gagattttattttaccaaattatcttaataaactattggtttgtttttcattaaagaaaaaaataatactttggaagtagtgtatata 8971119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 469 - 528
Target Start/End: Complemental strand, 52254004 - 52253945
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatac 528  Q
    |||||| ||||||||||||||||||||||||| ||| ||| |||||||||||||||||||    
T  52254004 attttaccaaattatcctaatcaactattggtctgtttttcattaaagaaaaaataatac 52253945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 1819718 - 1819656
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||| ||| | ||| ||||||||||||||||||||||    
T  1819718 attttaccaaattatcctaatcaactattgatttatttttcattaaagaaaaaataatacttt 1819656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 469 - 527
Target Start/End: Complemental strand, 19930870 - 19930812
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataata 527  Q
    |||||||||||||||| ||||||||||||||||||| ||| ||||||| ||||||||||    
T  19930870 attttatcaaattatcttaatcaactattggtttgtttttcattaaaggaaaaataata 19930812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 29370759 - 29370698
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  29370759 attttaccaaattatcctaatcaactattggtttgtttttcattaaaga-aaaataatacttt 29370698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 44571866 - 44571928
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||| ||||||||||||||||| | ||| ||||||||||||||||||||||    
T  44571866 attttaccaaattatcttaatcaactattggtttatttttcattaaagaaaaaataatacttt 44571928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 465 - 547
Target Start/End: Original strand, 44868249 - 44868331
Alignment:
Q  465 tgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
    |||||||||| |||||| |||||||||||||||| ||||| ||  |||||||| ||||||||| ||| ||| |||||||||||    
T  44868249 tgttattttaccaaattgtcctaatcaactattgatttgttttccattaaagataaaataatattttggaagtaatgtatata 44868331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 53814498 - 53814560
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||| ||||| ||||| ||| ||||||||||||||||||||||    
T  53814498 attttaccaaattatcctaatcaattattgatttgtttttcattaaagaaaaaataatacttt 53814560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 522
Target Start/End: Complemental strand, 24941036 - 24940983
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaa 522  Q
    |||||| ||||||||||||||||||||||||||||| ||| |||||||||||||    
T  24941036 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaa 24940983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 530
Target Start/End: Original strand, 49080478 - 49080539
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactt 530  Q
    |||||| ||||||||| ||||||||||||| ||||| ||| |||||||||||||||||||||    
T  49080478 attttaccaaattatcataatcaactattgatttgtttttcattaaagaaaaaataatactt 49080539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 464 - 531
Target Start/End: Original strand, 30780016 - 30780084
Alignment:
Q  464 atgttattttatcaaattatcctaatcaactattggtttgtcttttattaaag-aaaaaataatacttt 531  Q
    |||||||||||  |||||||||||||||||||||| ||||| ||| ||||||| |||||||||||||||    
T  30780016 atgttattttactaaattatcctaatcaactattgatttgtttttcattaaagaaaaaaataatacttt 30780084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 543
Target Start/End: Complemental strand, 2493258 - 2493184
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgta 543  Q
    |||||| || ||||||||||||||||||||| |||| ||| ||||||||||| ||||||| || ||| |||||||    
T  2493258 attttaccagattatcctaatcaactattgggttgtttttcattaaagaaaagataataccttggaagtaatgta 2493184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 527
Target Start/End: Complemental strand, 27653830 - 27653772
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataata 527  Q
    |||||| |||||||||||||||||||||||  |||| ||| ||||||||||||||||||    
T  27653830 attttaccaaattatcctaatcaactattgagttgtttttcattaaagaaaaaataata 27653772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 535
Target Start/End: Original strand, 29519526 - 29519592
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaa 535  Q
    |||||| |||||||  ||||| ||||||||||| || ||| ||||||||||||||||||||||||||    
T  29519526 attttaccaaattactctaataaactattggttcgtttttcattaaagaaaaaataatactttagaa 29519592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 34316378 - 34316316
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||| ||||| ||| |||||||||| |||||| ||||    
T  34316378 attttaccaaattatcctaatcaactattgatttgtttttcattaaagaaagaataatccttt 34316316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 39984973 - 39984911
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    ||||||||||||||| |||||||||||||| ||||| ||| |||||||||| ||| |||||||    
T  39984973 attttatcaaattattctaatcaactattgatttgtttttcattaaagaaacaattatacttt 39984911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 56373576 - 56373638
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| |||||||||||||||||| |||  ||||| ||| ||||||||||||||||||||||    
T  56373576 attttaccaaattatcctaatcaacaattattttgtttttcattaaagaaaaaataatacttt 56373638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 461 - 551
Target Start/End: Original strand, 620169 - 620261
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaa--gaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||||||||||||| ||||||||  ||||||||||||| ||||| |||  |||||   ||||||||||||||| ||| ||||||||| |||||    
T  620169 gagatgttattttaccaaattattttaatcaactattgatttgtttttctttaaaagaaaaaaataatactttggaagtaatgtatagagtat 620261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 469 - 530
Target Start/End: Complemental strand, 18430145 - 18430084
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactt 530  Q
    |||||| ||||||||| |||||||||||| |||||| |||  ||||||||||||||||||||    
T  18430145 attttaccaaattatcataatcaactattcgtttgtttttctttaaagaaaaaataatactt 18430084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 464 - 531
Target Start/End: Complemental strand, 11364386 - 11364319
Alignment:
Q  464 atgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    ||||||||||| ||||||||| |||| || ||||||||||| ||| ||| |||| |||||||||||||    
T  11364386 atgttattttaccaaattatcttaattaattattggtttgtttttcattgaagagaaaataatacttt 11364319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 394 - 444
Target Start/End: Original strand, 26934402 - 26934450
Alignment:
Q  394 attttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgca 444  Q
    ||||||||||||||||||||||||  |||||||| ||||||||||||||||    
T  26934402 attttaaaatgaatgtcgtttaag--ttttctacacatattaagaaatgca 26934450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 38991764 - 38991824
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| |||||||||||||||||  |||||||||| ||| ||| ||||||||||||||||||    
T  38991764 attttaccaaattatcctaatcaa--attggtttgtttttcattcaagaaaaaataatacttt 38991824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 522
Target Start/End: Original strand, 19903199 - 19903257
Alignment:
Q  464 atgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaa 522  Q
    |||||||||||  ||||||||  ||| |||||||||||||| ||| |||||||||||||    
T  19903199 atgttattttacaaaattatctgaataaactattggtttgtttttcattaaagaaaaaa 19903257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 522
Target Start/End: Original strand, 40010881 - 40010926
Alignment:
Q  477 aaattatcctaatcaactattggtttgtcttttattaaagaaaaaa 522  Q
    ||||||||||||| |||||||| ||||| || ||||||||||||||    
T  40010881 aaattatcctaattaactattgatttgttttatattaaagaaaaaa 40010926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 395 - 447
Target Start/End: Complemental strand, 45839864 - 45839814
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcatta 447  Q
    |||||||||||||||||||||| |||||  ||| || ||||||||||||||||    
T  45839864 ttttaaaatgaatgtcgtttaaagtttt--tacacaaattaagaaatgcatta 45839814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 2e-29; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 395 - 551
Target Start/End: Original strand, 3988668 - 3988823
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaact 494  Q
    ||||||||||||||||||||||| |||||  || |||||| |||||||||| ||||          |||||||||||||| ||||||||| |||||||||    
T  3988668 ttttaaaatgaatgtcgtttaagatttttacacacatattgagaaatgcat-aattaaaagaaagagagatgttattttaccaaattatcataatcaact 3988766  T
Q  495 attggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    ||| |||||| ||| |||||||||||||||||||||| |||||| | ||||||||||    
T  3988767 atttgtttgtttttcattaaagaaaaaataatacttttgaaatagtatatatagtat 3988823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 399 - 550
Target Start/End: Original strand, 20226148 - 20226299
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattg 498  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||||||||          |||||||||||||| |||||||| ||||||||||||||    
T  20226148 aaaatgaatgtcgtttaaggtttttccacatatattaagaaatgcattaatttaaagaaagagagatgttattttaccaaattatactaatcaactattg 20226247  T
Q  499 gtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagta 550  Q
     ||||| ||| ||||||||| ||||||||| || ||| || ||||| |||||    
T  20226248 atttgtttttcattaaagaataaataatacattggaagtagtgtatttagta 20226299  T

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Target: chr6; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 399 - 550
Target Start/End: Original strand, 22120132 - 22120283
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattg 498  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||||||||          |||||||||||||| |||||||| ||||||||||||||    
T  22120132 aaaatgaatgtcgtttaaggtttttccacatatattaagaaatgcattaatttaaagaaagagagatgttattttaccaaattatactaatcaactattg 22120231  T
Q  499 gtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagta 550  Q
     ||||| ||| ||||||||| ||||||||| || ||| || ||||| |||||    
T  22120232 atttgtttttcattaaagaataaataatacattggaagtagtgtatttagta 22120283  T

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Target: chr6; HSP #4
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 399 - 551
Target Start/End: Original strand, 12459246 - 12459398
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattg 498  Q
    ||||||||||| |||||||||||||  || |||| |||||||| ||||||||           |||| |||||||| |||||||||||||||||||||||    
T  12459246 aaaatgaatgttgtttaaggtttttacacacatactaagaaatacattaattaaaagaaagaaagatattattttaccaaattatcctaatcaactattg 12459345  T
Q  499 gtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    || ||| ||| ||||||||||||| |||||||| ||| |||||||||||||||    
T  12459346 gtctgtttttcattaaagaaaaaacaatactttggaagtaatgtatatagtat 12459398  T

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Target: chr6; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 398 - 527
Target Start/End: Complemental strand, 8957996 - 8957865
Alignment:
Q  398 taaaatgaatgtcgtttaaggtttttctaccca--tattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaacta 495  Q
    ||||||||||||||||||||||||||  || ||  ||||||||||| ||||||||          || ||||||| ||| ||||||||||||||||||||    
T  8957996 taaaatgaatgtcgtttaaggtttttacacacacatattaagaaatacattaattaaatgaaagagatatgttatcttaccaaattatcctaatcaacta 8957897  T
Q  496 ttggtttgtcttttattaaagaaaaaataata 527  Q
    ||||||||| ||||||||||||||||||||||    
T  8957896 ttggtttgttttttattaaagaaaaaataata 8957865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 398 - 527
Target Start/End: Original strand, 8961361 - 8961492
Alignment:
Q  398 taaaatgaatgtcgtttaaggtttttctaccca--tattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaacta 495  Q
    ||||||||||||||||||||||||||  || ||  ||||||||||| ||||||||          || ||||||| ||| ||||||||||||||||||||    
T  8961361 taaaatgaatgtcgtttaaggtttttacacacacatattaagaaatacattaattaaatgaaagagatatgttatcttaccaaattatcctaatcaacta 8961460  T
Q  496 ttggtttgtcttttattaaagaaaaaataata 527  Q
    ||||||||| ||||||||||||||||||||||    
T  8961461 ttggtttgttttttattaaagaaaaaataata 8961492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 399 - 524
Target Start/End: Original strand, 13011275 - 13011400
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattg 498  Q
    |||||||| |||||||||| |||||  || ||||||||||||||||||||||          |||||||||||||| ||||||||| ||||||||||| |    
T  13011275 aaaatgaacgtcgtttaagatttttacacacatattaagaaatgcattaattaaaagaaagagagatgttattttaccaaattatcttaatcaactatcg 13011374  T
Q  499 gtttgtcttttattaaagaaaaaata 524  Q
    |||||| ||| |||||||||||||||    
T  13011375 gtttgtttttcattaaagaaaaaata 13011400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 461 - 527
Target Start/End: Complemental strand, 9940811 - 9940745
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataata 527  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  9940811 gagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataata 9940745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 471 - 551
Target Start/End: Original strand, 16128006 - 16128086
Alignment:
Q  471 tttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||||||| ||||||||||||||||| ||||||| ||| |||||||||||||||||||||| ||| || ||||||||||||    
T  16128006 tttatcaatttatcctaatcaactatcggtttgtttttcattaaagaaaaaataatacttttgaagtagtgtatatagtat 16128086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 399 - 521
Target Start/End: Original strand, 21271330 - 21271452
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattg 498  Q
    |||||||||||||||||||||||||  || ||||||||||||||||||| ||          |||||||||||||| |||| ||||||||||||||||||    
T  21271330 aaaatgaatgtcgtttaaggtttttacacacatattaagaaatgcattatttaaaataaagagagatgttattttaccaaagtatcctaatcaactattg 21271429  T
Q  499 gtttgtcttttattaaagaaaaa 521  Q
     |||||  || ||||||||||||    
T  21271430 atttgttcttcattaaagaaaaa 21271452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 234190 - 234128
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  234190 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatacttt 234128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 461 - 551
Target Start/End: Original strand, 1502742 - 1502832
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||||||||||||| ||||||||| |||| |||||||||||||| ||| |||||| ||||||||||| ||| ||| || ||||||||||||    
T  1502742 gagatgttattttaccaaattatcttaattaactattggtttgtttttcattaaataaaaaataatattttggaagtagtgtatatagtat 1502832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 31443442 - 31443504
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  31443442 attttaccaaattatcctaatcaactattgatttgttttttattaaagaaaaaataatacttt 31443504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 461 - 551
Target Start/End: Original strand, 17552236 - 17552327
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaag-aaaaaataatactttagaaataatgtatatagtat 551  Q
    ||||||| |||||| |||||||||||||||||| |||||||||| ||| ||||||| ||||||||||| ||| ||| || ||||||||||||    
T  17552236 gagatgtaattttaccaaattatcctaatcaacaattggtttgtttttcattaaagaaaaaaataatattttggaagtagtgtatatagtat 17552327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 462 - 551
Target Start/End: Complemental strand, 17828445 - 17828356
Alignment:
Q  462 agatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataa-tgtatatagtat 551  Q
    ||||||||||||| ||||||||| |||||||| |||||||||| ||| |||||||||||| ||||||||| |||| || ||||||||||||    
T  17828445 agatgttattttaccaaattatcttaatcaaccattggtttgtttttcattaaagaaaaagtaatacttt-gaaagaagtgtatatagtat 17828356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 399 - 522
Target Start/End: Original strand, 13503771 - 13503893
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattg 498  Q
    ||||| ||||||||||||| |||||  || ||||||||||||||||||||||          || ||||||||||| |||||||||||||| |||||||     
T  13503771 aaaataaatgtcgtttaagatttttacacacatattaagaaatgcattaattaaaagaaagagaaatgttattttaccaaattatcctaataaactatt- 13503869  T
Q  499 gtttgtcttttattaaagaaaaaa 522  Q
    |||||| ||| |||||||||||||    
T  13503870 gtttgtttttcattaaagaaaaaa 13503893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 478 - 531
Target Start/End: Original strand, 29713412 - 29713465
Alignment:
Q  478 aattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  29713412 aattatcctaatcaactattagtttgttttttattaaagaaaaaataatacttt 29713465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 464 - 547
Target Start/End: Complemental strand, 577222 - 577138
Alignment:
Q  464 atgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaa-aaaataatactttagaaataatgtatata 547  Q
    |||||||||||  |||||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||| ||| || ||||||||    
T  577222 atgttattttactaaattatcctaatcaactattggtttgtttttcattaaagaaaaaaataataatttggaagtagtgtatata 577138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 464 - 532
Target Start/End: Original strand, 32619817 - 32619885
Alignment:
Q  464 atgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttta 532  Q
    ||||||| |||| |||||||| ||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  32619817 atgttatattattaaattatcttaatcaactattgatttgtttttcattaaagaaaaaataatacttta 32619885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 469 - 551
Target Start/End: Original strand, 10540473 - 10540556
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgt-atatagtat 551  Q
    ||||||| |||||||| ||||||||||||| ||||| ||| |||||||||||||||||||||| ||| || ||| |||||||||    
T  10540473 attttattaaattatcataatcaactattgatttgtttttcattaaagaaaaaataatactttggaagtagtgtaatatagtat 10540556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 24163711 - 24163773
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    ||||||||||||||||| ||||||||||| |||||| ||| |||||||||| |||||||||||    
T  24163711 attttatcaaattatccaaatcaactattagtttgtttttcattaaagaaataataatacttt 24163773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 399 - 504
Target Start/End: Complemental strand, 32194034 - 32193930
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattg 498  Q
    |||||||||||||||||||||||||  ||  ||||||||||||| ||||| |          |||||||||||||| |||||||||||||||||||||||    
T  32194034 aaaatgaatgtcgtttaaggtttttacacatatattaagaaatgtattaaataaaaaaata-gagatgttattttaccaaattatcctaatcaactattg 32193936  T
Q  499 gtttgt 504  Q
    ||||||    
T  32193935 gtttgt 32193930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 469 - 551
Target Start/End: Complemental strand, 1135081 - 1134998
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgt-atatagtat 551  Q
    |||||| |||||||||||||||||||||| |||||| |||  ||||||||||||||||| ||| ||| || ||| |||||||||    
T  1135081 attttaccaaattatcctaatcaactatttgtttgtttttctttaaagaaaaaataatattttggaagtagtgtaatatagtat 1134998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 461 - 551
Target Start/End: Original strand, 12322873 - 12322966
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtctttt---attaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||||||||||||| |||||||||||||| |||||||| ||| | ||||   ||||||||||| | |||||||| ||| || ||||||||||||    
T  12322873 gagatgttattttaccaaattatcctaattaactattgattttttttttttcattaaagaaaacacaatactttggaagtagtgtatatagtat 12322966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 399 - 527
Target Start/End: Original strand, 18737015 - 18737143
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattg 498  Q
    ||||| |||||||||||| ||||||   | |||||||| |||||||||||||          |||| | || ||||||||||||||||||| ||||||||    
T  18737015 aaaattaatgtcgtttaaagtttttacgcacatattaaaaaatgcattaattaaaagaaacagagacgctaatttatcaaattatcctaattaactattg 18737114  T
Q  499 gtttgtcttttattaaagaaaaaataata 527  Q
     ||| | ||| ||||||||||||||||||    
T  18737115 ttttatttttcattaaagaaaaaataata 18737143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 23259322 - 23259384
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||| ||||  ||| | ||||||||||||||||||||    
T  23259322 attttaccaaattatcctaatcaactattgatttgcttttcactaaagaaaaaataatacttt 23259384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 469 - 522
Target Start/End: Complemental strand, 19675134 - 19675081
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaa 522  Q
    |||||| ||||||||||||||||||||||| ||||| ||| |||||||||||||    
T  19675134 attttaccaaattatcctaatcaactattgatttgtttttcattaaagaaaaaa 19675081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 547
Target Start/End: Original strand, 17267611 - 17267683
Alignment:
Q  476 caaattatcctaatcaactattggtttgtcttttattaaagaaaa-aataatactttagaaataatgtatata 547  Q
    |||||||| |||||||| |||| |||||| |||||| |||||||| |||||||||||| ||||| ||||||||    
T  17267611 caaattattctaatcaaatattagtttgttttttatcaaagaaaaaaataatactttaaaaatagtgtatata 17267683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 463 - 531
Target Start/End: Complemental strand, 3847813 - 3847745
Alignment:
Q  463 gatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    ||||||||||||   ||||||| ||||||||||||| ||| | ||| ||||||||||||||||| ||||    
T  3847813 gatgttattttacagaattatcttaatcaactattgatttatttttaattaaagaaaaaataatccttt 3847745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 491 - 551
Target Start/End: Complemental strand, 32193835 - 32193775
Alignment:
Q  491 aactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||||||||||||| ||  ||||||||||| |||||||||| ||| || ||||||||||||    
T  32193835 aactattggtttgttttacattaaagaaaagataatactttggaagtagtgtatatagtat 32193775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 469 - 532
Target Start/End: Original strand, 10520387 - 10520450
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttta 532  Q
    |||||| ||||||||| ||||||| |||||| |||| | | |||||| ||||||||||||||||    
T  10520387 attttaccaaattatcttaatcaaatattggattgtttctcattaaataaaaaataatacttta 10520450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 469 - 543
Target Start/End: Original strand, 24555924 - 24555999
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttatt-aaagaaaaaataatactttagaaataatgta 543  Q
    |||||| ||||||||| ||||||||||||| ||||| ||| ||| ||| |||||| ||||||||  ||||||||||    
T  24555924 attttaccaaattatcataatcaactattgatttgtttttcattaaaaaaaaaaaaaatactttgaaaataatgta 24555999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 2e-29; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 399 - 547
Target Start/End: Complemental strand, 11977813 - 11977665
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattg 498  Q
    ||||||| ||||||||||| |||||  || ||||||||||||||||||||||          |||||||| ||||| |||||||||||||||||||||||    
T  11977813 aaaatgagtgtcgtttaagctttttacacacatattaagaaatgcattaattaaaagaaagagagatgttgttttaccaaattatcctaatcaactattg 11977714  T
Q  499 gtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
    ||||||  || |||||||||||||||||||||| ||| || ||||||||    
T  11977713 gtttgttgttcattaaagaaaaaataatactttggaagtagtgtatata 11977665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 395 - 547
Target Start/End: Complemental strand, 7721317 - 7721172
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaact 494  Q
    ||||||||||||||||||||||||||||| ||| |||||||| |||||||||||            |||||||||||||| ||||||||||||||||| |    
T  7721317 ttttaaaatgaatgtcgtttaaggtttttatacacatattaataaatgcattaa-------aaaaagagatgttattttaacaaattatcctaatcaatt 7721225  T
Q  495 attggtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
    |||||||||| | |  |||||||||||||||||||||  || |||||||||||    
T  7721224 attggtttgtttgtctttaaagaaaaaataatactttgaaagtaatgtatata 7721172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 464 - 551
Target Start/End: Complemental strand, 36165047 - 36164960
Alignment:
Q  464 atgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    ||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| ||| |||||||||||||||    
T  36165047 atgttattttaccaaattatcctaatcaactattgatttgttttttattaaagaaaaaataatattttggaagtaatgtatatagtat 36164960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 399 - 551
Target Start/End: Original strand, 14161827 - 14161980
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttct-acccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactatt 497  Q
    |||||||||||||||||||||||||   || ||||||||||||||||||||||            |||||||||||||||||||||| ||| |||||| |    
T  14161827 aaaatgaatgtcgtttaaggttttttgcacacatattaagaaatgcattaattaaaagaaagaaggatgttattttatcaaattatcataaacaactact 14161926  T
Q  498 ggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    ||||| | ||| |||||||||||||||||||||| ||| || ||||||||||||    
T  14161927 ggtttatttttcattaaagaaaaaataatactttggaagtagtgtatatagtat 14161980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 395 - 547
Target Start/End: Complemental strand, 21634340 - 21634189
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaact 494  Q
    |||||||||||||||||||||| ||||||  || ||||||||||||||||||||||          |||||||||||||| |||| |||| ||||||| |    
T  21634340 ttttaaaatgaatgtcgtttaaagtttttacacacatattaagaaatgcattaattaaaataaagagagatgttattttaccaaagtatcataatcaatt 21634241  T
Q  495 attggtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
    |||||||||| ||| ||||||| |||||||||| ||| ||| || ||||||||    
T  21634240 attggtttgtttttcattaaag-aaaaataatattttggaagtagtgtatata 21634189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 395 - 547
Target Start/End: Complemental strand, 21642587 - 21642436
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaact 494  Q
    |||||||||||||||||||||| ||||||  || ||||||||||||||||||||||          |||||||||||||| |||| |||| ||||||| |    
T  21642587 ttttaaaatgaatgtcgtttaaagtttttacacacatattaagaaatgcattaattaaaataaagagagatgttattttaccaaagtatcataatcaatt 21642488  T
Q  495 attggtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
    |||||||||| ||| ||||||| |||||||||| ||| ||| || ||||||||    
T  21642487 attggtttgtttttcattaaag-aaaaataatattttggaagtagtgtatata 21642436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 399 - 527
Target Start/End: Complemental strand, 34534584 - 34534456
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattg 498  Q
    ||||||||||| |||| ||||||||  || |||||||| |||||||||||||          ||||| |||||||| |||||||||||||||||||||||    
T  34534584 aaaatgaatgttgtttgaggtttttacacacatattaaaaaatgcattaattaaaagaaagagagatattattttaccaaattatcctaatcaactattg 34534485  T
Q  499 gtttgtcttttattaaagaaaaaataata 527  Q
    |||||| ||| ||||||||||||||||||    
T  34534484 gtttgtttttcattaaagaaaaaataata 34534456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 395 - 522
Target Start/End: Complemental strand, 13974503 - 13974376
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaact 494  Q
    ||||||||||||||||||||||| |||||  || ||||||||||||||||||||||          ||| |||||||||| |||||||||||||||||||    
T  13974503 ttttaaaatgaatgtcgtttaagatttttacacacatattaagaaatgcattaattaaaagaaagagaggtgttattttaccaaattatcctaatcaact 13974404  T
Q  495 attggtttgtcttttattaaagaaaaaa 522  Q
    ||| |||||| ||  |||||||||||||    
T  13974403 atttgtttgttttccattaaagaaaaaa 13974376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 399 - 545
Target Start/End: Complemental strand, 843243 - 843097
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattg 498  Q
    |||||||||| |||||||| ||| || ||  |||||||||||||||||||||          || ||||||||||| |||||||||||||||||||||||    
T  843243 aaaatgaatgacgtttaagatttctccacaaatattaagaaatgcattaattaaaagaaggagatatgttattttaccaaattatcctaatcaactattg 843144  T
Q  499 gtttgtcttttattaaagaaaaaataatactttagaaataatgtata 545  Q
    |||||| | | |||||||||||||||| ||||| ||| || ||||||    
T  843143 gtttgtttctcattaaagaaaaaataacacttttgaagtagtgtata 843097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 399 - 527
Target Start/End: Original strand, 1309286 - 1309414
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattg 498  Q
    |||||||||||| ||||||||||||  || ||||||||||||||||||||||          || ||||||||||||||||||||| |||||||| ||||    
T  1309286 aaaatgaatgtcatttaaggtttttacacacatattaagaaatgcattaattaaaagaaatagatatgttattttatcaaattatcataatcaacaattg 1309385  T
Q  499 gtttgtcttttattaaagaaaaaataata 527  Q
     ||||| | | ||||||||||||||||||    
T  1309386 atttgtttatcattaaagaaaaaataata 1309414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 387 - 531
Target Start/End: Complemental strand, 7736612 - 7736467
Alignment:
Q  387 tccctcaattttaaaatgaatgtcgtttaaggtttttctacccatattaagaaa-tgcattaattnnnnnnnnnngagatgttattttatcaaattatcc 485  Q
    |||||| |||| ||||||||||||||||||| |||||  || |||||||| ||| ||||||||||          || ||||||||||| || |||||||    
T  7736612 tccctccatttcaaaatgaatgtcgtttaagatttttacacacatattaaaaaaatgcattaattaaaataaagagatatgttattttaccatattatcc 7736513  T
Q  486 taatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||||||||| ||| || ||| ||||||||||||||||||||||    
T  7736512 taatcaactattagttcgtttttcattaaagaaaaaataatacttt 7736467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 2729783 - 2729845
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  2729783 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatacttt 2729845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 34446024 - 34446086
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  34446024 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatacttt 34446086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 42661937 - 42661999
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  42661937 attttaccaaattatcctaatcaactattagtttgttttttattaaagaaaaaataatacttt 42661999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 469 - 529
Target Start/End: Original strand, 42978070 - 42978130
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatact 529  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  42978070 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatact 42978130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 395 - 531
Target Start/End: Complemental strand, 38370101 - 38369965
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaact 494  Q
    ||||||||||| ||| |||||||||||||  ||  ||||||| |||||||||||||          || ||||||||||| |||||||||||||||||||    
T  38370101 ttttaaaatgattgttgtttaaggtttttacacatatattaataaatgcattaattaaaataaagagatatgttattttaccaaattatcctaatcaact 38370002  T
Q  495 attggtttgtcttttattaaagaaaaaataatacttt 531  Q
    ||| ||| || ||| |||||  |||||||||||||||    
T  38370001 atttgttcgtttttcattaataaaaaaataatacttt 38369965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 467 - 531
Target Start/End: Original strand, 4911110 - 4911175
Alignment:
Q  467 ttattttatcaaattatcctaatcaactattggtttgtcttttattaaag-aaaaaataatacttt 531  Q
    |||||||| ||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||    
T  4911110 ttattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaaataatacttt 4911175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 469 - 522
Target Start/End: Original strand, 8336404 - 8336457
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaa 522  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  8336404 attttaccaaattatcctaatcaactattggtttgttttttattaaagaaaaaa 8336457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 461 - 550
Target Start/End: Original strand, 15167001 - 15167090
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagta 550  Q
    |||| ||||||||| |||||||||||| |||||||||||||  | ||| |||||||||||||||||| ||| ||| || |||||||||||    
T  15167001 gagacgttattttaccaaattatcctagtcaactattggttaatttttcattaaagaaaaaataatattttggaagtagtgtatatagta 15167090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 464 - 545
Target Start/End: Complemental strand, 27797938 - 27797858
Alignment:
Q  464 atgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtata 545  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||| |||||||| ||||||||||||| ||| |||| ||||    
T  27797938 atgttattttaccaaattatcttaatcaactattggtttgtttttcattaaaga-aaaataatactttggaagtaatatata 27797858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 461 - 551
Target Start/End: Original strand, 28591612 - 28591706
Alignment:
Q  461 gagatgttattttatcaaattatcctaat----caactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||||||||||||| ||||||||||||||    ||||||||| ||||| ||| |||||||||||||||||  |||| ||||| ||||||||||||    
T  28591612 gagatgttattttaccaaattatcctaattaatcaactattgatttgtttttcattaaagaaaaaataattttttaaaaatagtgtatatagtat 28591706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 468 - 528
Target Start/End: Complemental strand, 14006049 - 14005989
Alignment:
Q  468 tattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatac 528  Q
    ||||||| ||||||||||||||||| ||||||||||| ||| |||||||||||||||||||    
T  14006049 tattttaccaaattatcctaatcaaatattggtttgtttttcattaaagaaaaaataatac 14005989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 464 - 532
Target Start/End: Original strand, 38362130 - 38362198
Alignment:
Q  464 atgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttta 532  Q
    |||||||||||  ||||||||||||| |||||||| ||| | |||||||||||||||||||||||||||    
T  38362130 atgttattttactaaattatcctaattaactattgttttattttttattaaagaaaaaataatacttta 38362198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 6519133 - 6519070
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaa-aaaataatacttt 531  Q
    |||||||||||||||||||||||||||||| ||||| ||| ||||||||| |||||||||||||    
T  6519133 attttatcaaattatcctaatcaactattgatttgtttttcattaaagaaaaaaataatacttt 6519070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 469 - 536
Target Start/End: Original strand, 34972647 - 34972714
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaa 536  Q
    |||||| ||||||||||||||||||||||  ||||| |||||||||||||| ||||||||||| ||||    
T  34972647 attttaccaaattatcctaatcaactattaatttgttttttattaaagaaagaataatactttggaaa 34972714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 3306006 - 3306068
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||| ||||||||||||| ||||| ||| ||||||||||||||||||||||    
T  3306006 attttaccaaattatcttaatcaactattgatttgtttttcattaaagaaaaaataatacttt 3306068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 465 - 551
Target Start/End: Original strand, 7748891 - 7748977
Alignment:
Q  465 tgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||||| ||| |||||||| ||||| || ||||||||||| ||| ||||||||||||||||||||||  || | |||||||||||||    
T  7748891 tgttatattaccaaattattctaattaattattggtttgtttttcattaaagaaaaaataatactttgaaagttatgtatatagtat 7748977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 14620491 - 14620553
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||||||||||||| ||||||| ||||||||||| ||| || |||||||||||||||||||    
T  14620491 attttatcaaattatcttaatcaattattggtttgtttttcatcaaagaaaaaataatacttt 14620553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 39566339 - 39566277
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||| ||||| ||| |||||||| |||||||||||||    
T  39566339 attttaccaaattatcctaatcaactattgatttgtttttcattaaagagaaaataatacttt 39566277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 469 - 527
Target Start/End: Complemental strand, 39730102 - 39730044
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataata 527  Q
    |||||| |||||||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  39730102 attttaccaaattatcctaatcaactattcgtttgtttttcattaaagaaaaaataata 39730044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 464 - 521
Target Start/End: Original strand, 7579586 - 7579643
Alignment:
Q  464 atgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaa 521  Q
    |||||||||| |||||||||||||||||||||||| ||||| ||| ||||||||||||    
T  7579586 atgttattttttcaaattatcctaatcaactattgatttgtttttcattaaagaaaaa 7579643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 522
Target Start/End: Original strand, 29807311 - 29807364
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaa 522  Q
    |||||| ||||||||||||||||||||||||||||| ||||| |||||||||||    
T  29807311 attttaccaaattatcctaatcaactattggtttgttttttactaaagaaaaaa 29807364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 522
Target Start/End: Original strand, 39335200 - 39335253
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaa 522  Q
    |||||| ||||||||||||||||||||||||||||| ||| |||||||||||||    
T  39335200 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaa 39335253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 469 - 528
Target Start/End: Original strand, 42104060 - 42104119
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatac 528  Q
    |||||| |||||||||||||||||||||||  |||| ||| |||||||||||||||||||    
T  42104060 attttaccaaattatcctaatcaactattgacttgtttttcattaaagaaaaaataatac 42104119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 395 - 498
Target Start/End: Original strand, 27557744 - 27557847
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaact 494  Q
    ||||||||| |||||||||||| | |||| ||| ||||||||||||| ||||||||          ||||||||||||||||||||||||  |||| |||    
T  27557744 ttttaaaataaatgtcgtttaaagattttatacacatattaagaaatacattaattaaaagaataagagatgttattttatcaaattatctgaatcgact 27557843  T
Q  495 attg 498  Q
    ||||    
T  27557844 attg 27557847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 469 - 551
Target Start/End: Complemental strand, 4425130 - 4425047
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgt-atatagtat 551  Q
    |||||| ||||||||| |||||| |||| | ||||| ||| |||||||||||||||||||||| ||| || ||| |||||||||    
T  4425130 attttaccaaattatcttaatcatctatcgatttgtttttcattaaagaaaaaataatactttggaagtagtgtaatatagtat 4425047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 469 - 520
Target Start/End: Original strand, 21319309 - 21319360
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaa 520  Q
    |||||| ||||||||||||||||||||||||||||| ||| |||||| ||||    
T  21319309 attttaccaaattatcctaatcaactattggtttgtttttcattaaaaaaaa 21319360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 468 - 531
Target Start/End: Complemental strand, 41645392 - 41645330
Alignment:
Q  468 tattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    ||||||||||||||||  |||||||| |||||||||| ||| |||||||| |||||||||||||    
T  41645392 tattttatcaaattattttaatcaaccattggtttgtttttcattaaaga-aaaataatacttt 41645330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 535
Target Start/End: Complemental strand, 26660910 - 26660845
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaa 535  Q
    |||||| |||||| || ||||||||||||||||||| ||| |||||||| ||||||||||| |||||    
T  26660910 attttaccaaattctcttaatcaactattggtttgtttttcattaaaga-aaaataatactctagaa 26660845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 535
Target Start/End: Complemental strand, 26932503 - 26932438
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaa 535  Q
    |||||| |||||| || ||||||||||||||||||| ||| |||||||| ||||||||||| |||||    
T  26932503 attttaccaaattctcttaatcaactattggtttgtttttcattaaaga-aaaataatactctagaa 26932438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 522
Target Start/End: Original strand, 21375647 - 21375700
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaa 522  Q
    |||||| |||||||||||||||| ||||| |||||| ||| |||||||||||||    
T  21375647 attttaccaaattatcctaatcacctatttgtttgtttttcattaaagaaaaaa 21375700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 399 - 450
Target Start/End: Original strand, 4911037 - 4911088
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaatt 450  Q
    |||||||||||| ||||||||||||  || ||||||||||||| ||||||||    
T  4911037 aaaatgaatgtcatttaaggtttttacacacatattaagaaatacattaatt 4911088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 461 - 496
Target Start/End: Original strand, 27557944 - 27557979
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactat 496  Q
    ||||||||||||| ||||||||||||||||||||||    
T  27557944 gagatgttattttttcaaattatcctaatcaactat 27557979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 469 - 520
Target Start/End: Complemental strand, 27600550 - 27600499
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaa 520  Q
    |||||| ||||||||||||||||||||||| ||||| ||| |||||| ||||    
T  27600550 attttaccaaattatcctaatcaactattgatttgtttttcattaaaaaaaa 27600499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 522
Target Start/End: Complemental strand, 13761868 - 13761823
Alignment:
Q  477 aaattatcctaatcaactattggtttgtcttttattaaagaaaaaa 522  Q
    |||||||| ||||||||||||||||| | ||| |||||||||||||    
T  13761868 aaattatcttaatcaactattggtttatttttcattaaagaaaaaa 13761823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 462 - 495
Target Start/End: Original strand, 34381787 - 34381820
Alignment:
Q  462 agatgttattttatcaaattatcctaatcaacta 495  Q
    ||||||||||||| ||||||||||||||||||||    
T  34381787 agatgttattttaacaaattatcctaatcaacta 34381820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 522
Target Start/End: Complemental strand, 39504881 - 39504828
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaa 522  Q
    |||||| |||||||| ||||||||||||| |||||| ||| | |||||||||||    
T  39504881 attttaccaaattattctaatcaactattagtttgtttttcaataaagaaaaaa 39504828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 2e-29; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 399 - 531
Target Start/End: Original strand, 37038697 - 37038829
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattg 498  Q
    ||||||| ||||||||||| |||||  || ||||||||||||| ||||||||          |||||||||||||| |||||||||||||||||||||||    
T  37038697 aaaatgagtgtcgtttaagatttttacacacatattaagaaatacattaattaaaagaaagagagatgttattttaccaaattatcctaatcaactattg 37038796  T
Q  499 gtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||| ||||||||||||||||||||||    
T  37038797 gtttgtttttcattaaagaaaaaataatacttt 37038829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 395 - 535
Target Start/End: Complemental strand, 8540268 - 8540127
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaact 494  Q
    ||||||||||||| | ||||||| |||||  || ||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||    
T  8540268 ttttaaaatgaatatagtttaagatttttacacacatattaagaaatgcattaattaaaagaaaaagagatgttattttatcaaattatcctaatcaact 8540169  T
Q  495 attggtttgtcttttattaaagaa-aaaataatactttagaa 535  Q
    ||| |||||| ||| ||||||||| ||||||||| |||||||    
T  8540168 attagtttgtttttcattaaagaaaaaaataatattttagaa 8540127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 465 - 551
Target Start/End: Original strand, 18719426 - 18719512
Alignment:
Q  465 tgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||  ||||| ||||||||||||    
T  18719426 tgttattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttgaaaatagtgtatatagtat 18719512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 461 - 547
Target Start/End: Complemental strand, 10195838 - 10195752
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
    |||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| ||| || ||||||||    
T  10195838 gagatgttattttaccaaattatcctaatcaactattgttttgttttttattaaagaaaaaataatattttggaagtagtgtatata 10195752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 395 - 551
Target Start/End: Complemental strand, 33056120 - 33055964
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaact 494  Q
    |||||||||||||||||||||||  ||||  || |||||||| |||||  ||||||          |||||||||||||| ||||||||| |||||||||    
T  33056120 ttttaaaatgaatgtcgtttaagaattttacacacatattaaaaaatgtcttaattaaaagaaagagagatgttattttaccaaattatcataatcaact 33056021  T
Q  495 attggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||||||||| ||| ||||||||||||||||||| ||  || || ||||||||||||    
T  33056020 attggtttgtttttcattaaagaaaaaataatacattgaaagtagtgtatatagtat 33055964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 399 - 527
Target Start/End: Original strand, 11188177 - 11188305
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattg 498  Q
    |||||||||||||||||||||| ||  || |||||||| ||||||||||||           |||||||||||||| ||| |||||||||||||||||||    
T  11188177 aaaatgaatgtcgtttaaggttcttacacacatattaataaatgcattaatcaaaagaaagagagatgttattttaccaagttatcctaatcaactattg 11188276  T
Q  499 gtttgtcttttattaaagaaaaaataata 527  Q
    | |||| ||| ||||||||||||||||||    
T  11188277 ggttgtttttcattaaagaaaaaataata 11188305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 467 - 540
Target Start/End: Complemental strand, 43971646 - 43971573
Alignment:
Q  467 ttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataat 540  Q
    |||||||| | ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||    
T  43971646 ttattttaccgaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttagaagtaat 43971573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 464 - 547
Target Start/End: Original strand, 33482222 - 33482305
Alignment:
Q  464 atgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
    ||||||| ||| |||||||||||| |||||| ||||||||| ||||||||| |||||| ||||||||| |||||||||||||||    
T  33482222 atgttatcttaccaaattatcctattcaacttttggtttgttttttattaaggaaaaattaatactttcgaaataatgtatata 33482305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 19636664 - 19636602
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||    
T  19636664 attttatcaaattatcctaatcaactattggtttatttttcattaaagaaaaaataatacttt 19636602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 19835257 - 19835195
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||    
T  19835257 attttatcaaattatcctaatcaactattggtttatttttcattaaagaaaaaataatacttt 19835195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 462 - 547
Target Start/End: Original strand, 27726410 - 27726493
Alignment:
Q  462 agatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||| |||||  ||||||||||| ||| ||| |||||||||||    
T  27726410 agatgttattttaccaaattatcctaatcaactattggtttgtttttcattaa--aaaaaataataatttggaagtaatgtatata 27726493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 29396677 - 29396739
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  29396677 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatacttt 29396739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 462 - 551
Target Start/End: Original strand, 4658222 - 4658313
Alignment:
Q  462 agatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaa--taatactttagaaataatgtatatagtat 551  Q
    ||||||||||||| |||||| |||||||||||||||||||||| ||| |||||||||||||  |||||||||  || || ||||||||||||    
T  4658222 agatgttattttaccaaattgtcctaatcaactattggtttgtttttcattaaagaaaaaaattaatactttgaaagtagtgtatatagtat 4658313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 462 - 529
Target Start/End: Original strand, 27964215 - 27964282
Alignment:
Q  462 agatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatact 529  Q
    ||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||||||||    
T  27964215 agatgttattttaccaaattattttaatcaactattggtttgtttttcattaaagaaaaaataatact 27964282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 441228 - 441290
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| |||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||    
T  441228 attttaccaaattatcctaatcaaccattggtttgtttttcattaaagaaaaaataatacttt 441290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 4288708 - 4288770
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| |||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  4288708 attttaccaaattatcctaatcaactattagtttgtttttcattaaagaaaaaataatacttt 4288770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 32228008 - 32228070
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||    
T  32228008 attttaccaaattatcctaatcaactattgggttgtttttcattaaagaaaaaataatacttt 32228070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 38926762 - 38926700
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  38926762 attttaccaaattatcataatcaactattggtttgtttttcattaaagaaaaaataatacttt 38926700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 469 - 545
Target Start/End: Original strand, 12393916 - 12393992
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtata 545  Q
    |||||| |||||||||||||||||||||| |||||| ||| ||||||||||||||| ||||||  ||||| ||||||    
T  12393916 attttaccaaattatcctaatcaactattagtttgtttttcattaaagaaaaaatattactttgaaaatagtgtata 12393992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 29808969 - 29808906
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaa-aaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||    
T  29808969 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaaataatacttt 29808906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 469 - 527
Target Start/End: Complemental strand, 1423347 - 1423289
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataata 527  Q
    |||||| ||||||||||||||||||||||||||||| | | ||||||||||||||||||    
T  1423347 attttaccaaattatcctaatcaactattggtttgtttctcattaaagaaaaaataata 1423289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 4133178 - 4133116
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||||||||| |||  |||| ||||||||||||||||    
T  4133178 attttaccaaattatcctaatcaactattggtttgtttttctttaaggaaaaaataatacttt 4133116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 469 - 527
Target Start/End: Original strand, 6220401 - 6220459
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataata 527  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||| | |||||||||    
T  6220401 attttatcaaattatcctaatcaactattggtttgtttttcattaaaaagaaaataata 6220459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 469 - 527
Target Start/End: Complemental strand, 12342249 - 12342191
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataata 527  Q
    |||||| ||||||||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  12342249 attttaccaaattatcctaatcaactattgatttgtttttcattaaagaaaaaataata 12342191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 477 - 531
Target Start/End: Original strand, 43480875 - 43480929
Alignment:
Q  477 aaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    ||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  43480875 aaattatcctaataaactattggtttgtttttcattaaagaaaaaataatacttt 43480929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 45081897 - 45081959
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||| ||||| ||| ||||||||||||||||| ||||    
T  45081897 attttaccaaattatcctaatcaactattgttttgtttttcattaaagaaaaaataatgcttt 45081959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 395 - 531
Target Start/End: Original strand, 7872702 - 7872836
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaact 494  Q
    ||||||||||||||| ||||| |||||||  || |||||||| |||| ||||||||          ||||| |||||||| |||||||| || ||| |||    
T  7872702 ttttaaaatgaatgttgtttatggtttttacacacatattaaaaaattcattaattaaaagaaa--gagatattattttaccaaattattctgatcgact 7872799  T
Q  495 attggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||| ||||| ||| ||||||||||||||||||||||    
T  7872800 attgatttgtttttcattaaagaaaaaataatacttt 7872836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 462 - 551
Target Start/End: Complemental strand, 11132713 - 11132624
Alignment:
Q  462 agatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||| |||| ||| ||||||||  |||||||||||| |||||| ||| |||||||||||||||||| |||  || |||||||||||||||    
T  11132713 agatattatattaccaaattattataatcaactatttgtttgtttttcattaaagaaaaaataatattttgaaagtaatgtatatagtat 11132624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 522
Target Start/End: Complemental strand, 30855261 - 30855208
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaa 522  Q
    |||||| ||||||||||||||||||||||||||||| ||| |||||||||||||    
T  30855261 attttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaa 30855208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 469 - 522
Target Start/End: Original strand, 34546145 - 34546198
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaa 522  Q
    |||||||||||||||||||||||||||||| ||||| ||| |||||||||||||    
T  34546145 attttatcaaattatcctaatcaactattgatttgtttttcattaaagaaaaaa 34546198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 467 - 532
Target Start/End: Original strand, 40608601 - 40608666
Alignment:
Q  467 ttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttta 532  Q
    |||||||| |||||||||||||||||||||  |||||| ||| |||||||||||||||||| ||||    
T  40608601 ttattttaccaaattatcctaatcaactataagtttgtttttcattaaagaaaaaataatatttta 40608666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 469 - 528
Target Start/End: Original strand, 36106400 - 36106459
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatac 528  Q
    |||||| ||||||||| |||||||||||||| |||| |||||||||| ||||||||||||    
T  36106400 attttaccaaattatcttaatcaactattggattgttttttattaaaaaaaaaataatac 36106459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 464 - 527
Target Start/End: Original strand, 36685734 - 36685796
Alignment:
Q  464 atgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataata 527  Q
    ||||||||||| ||||||||||||||||| ||||||||||| ||| || |||||||||||||||    
T  36685734 atgttattttaccaaattatcctaatcaattattggtttgt-tttcatcaaagaaaaaataata 36685796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 8774208 - 8774147
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||||||| | ||| |||||||| |||||||||||||    
T  8774208 attttaccaaattatcctaatcaactattggtttatttttcattaaaga-aaaataatacttt 8774147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 8789427 - 8789488
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||||||||||||| | ||| ||||||| ||||||||||||||    
T  8789427 attttaccaaattatcctaatcaactattggtttatttttcattaaag-aaaaataatacttt 8789488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 477 - 531
Target Start/End: Complemental strand, 13562142 - 13562088
Alignment:
Q  477 aaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    ||||||||||||||||| |||||||||| ||| |||||| |||||||||||||||    
T  13562142 aaattatcctaatcaaccattggtttgtttttcattaaataaaaaataatacttt 13562088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 16807514 - 16807576
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    ||||||||||||||| ||||||||||||| |||||| ||| ||||||||||| ||||| ||||    
T  16807514 attttatcaaattattctaatcaactatttgtttgtttttcattaaagaaaatataattcttt 16807576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 16846795 - 16846857
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    ||||||||||||||| ||||||||||||| |||||| ||| ||||||||||| ||||| ||||    
T  16846795 attttatcaaattattctaatcaactatttgtttgtttttcattaaagaaaatataattcttt 16846857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 551
Target Start/End: Complemental strand, 18579302 - 18579240
Alignment:
Q  489 tcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    |||||||||||||||| ||| |||||||||||||| ||||||| ||| || ||||||||||||    
T  18579302 tcaactattggtttgtttttcattaaagaaaaaattatactttggaagtagtgtatatagtat 18579240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 387 - 495
Target Start/End: Complemental strand, 29412221 - 29412113
Alignment:
Q  387 tccctcaattttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcct 486  Q
    |||||| |||| ||||| |||||||||||||||||||  ||  |||||||||||||||||||||          || | ||||||||| |||||||||||    
T  29412221 tccctccatttcaaaattaatgtcgtttaaggtttttacacgtatattaagaaatgcattaattaaaaggaagagataagttattttaccaaattatcct 29412122  T
Q  487 aatcaacta 495  Q
    |||||||||    
T  29412121 aatcaacta 29412113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 461 - 523
Target Start/End: Complemental strand, 34455855 - 34455793
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaat 523  Q
    |||||||| ||||| |||||||||||||||||||| ||||||   ||||||||||||||||||    
T  34455855 gagatgttcttttaccaaattatcctaatcaactactggtttaatttttattaaagaaaaaat 34455793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 531
Target Start/End: Complemental strand, 42743184 - 42743123
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||||||    
T  42743184 attttaccaaattatcctaatcaattattgatttgttttttattaaagaaaaaa-aatacttt 42743123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 464 - 531
Target Start/End: Complemental strand, 19164514 - 19164450
Alignment:
Q  464 atgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    ||||||||||| ||||||||   ||||||||||||||||||  || ||||||||||||||||||||||    
T  19164514 atgttattttaccaaattat---aatcaactattggtttgttattcattaaagaaaaaataatacttt 19164450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 465 - 547
Target Start/End: Complemental strand, 19469685 - 19469601
Alignment:
Q  465 tgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaa--aaaataatactttagaaataatgtatata 547  Q
    |||||| |||| |||||||| ||||||| ||||| ||||| ||| |||||||||  ||||||||||||| ||| |||||||||||    
T  19469685 tgttatattattaaattatcgtaatcaattattgatttgtttttcattaaagaaaaaaaataatactttggaactaatgtatata 19469601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 395 - 450
Target Start/End: Original strand, 12565394 - 12565449
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaatt 450  Q
    |||||||||||||||||||||||||||||  || |||||||| |||||| ||||||    
T  12565394 ttttaaaatgaatgtcgtttaaggtttttacacacatattaataaatgcgttaatt 12565449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 476 - 531
Target Start/End: Complemental strand, 42005039 - 42004985
Alignment:
Q  476 caaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||||||||||||||||||| |||||| |||||||||| ||| |||||||||||    
T  42005039 caaattatcctaatcaactatttgtttgt-ttttattaaaaaaacaataatacttt 42004985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 25383482 - 25383544
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| ||||||||| ||||||||||||| ||||| ||| |||||||||| | |||||||||    
T  25383482 attttaccaaattatcttaatcaactattgatttgtttttcattaaagaaatagtaatacttt 25383544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 399 - 449
Target Start/End: Complemental strand, 43972001 - 43971951
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaat 449  Q
    |||||||||||||| ||||||||||  || |||||||||||||||||||||    
T  43972001 aaaatgaatgtcgtctaaggtttttacacacatattaagaaatgcattaat 43971951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 464 - 504
Target Start/End: Original strand, 14833752 - 14833792
Alignment:
Q  464 atgttattttatcaaattatcctaatcaactattggtttgt 504  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
T  14833752 atgttattttaccaaattatcccaatcaactattggtttgt 14833792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 477 - 532
Target Start/End: Complemental strand, 18717224 - 18717169
Alignment:
Q  477 aaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttta 532  Q
    |||||||||||||||| ||||||||||| ||| |||||| || |||||| ||||||    
T  18717224 aaattatcctaatcaattattggtttgtttttcattaaaaaataaataaaacttta 18717169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 387 - 442
Target Start/End: Complemental strand, 45423845 - 45423790
Alignment:
Q  387 tccctcaattttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatg 442  Q
    |||||| |||||||||||||||||||||||  |||||  || ||||||||||||||    
T  45423845 tccctccattttaaaatgaatgtcgtttaaaatttttacacacatattaagaaatg 45423790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 399 - 444
Target Start/End: Original strand, 681694 - 681739
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgca 444  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||    
T  681694 aaaatgagtgtcgtttaaggtttttgcacacatattaagaaatgca 681739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 551
Target Start/End: Original strand, 7028847 - 7028892
Alignment:
Q  506 ttttattaaagaaaaaataatactttagaaataatgtatatagtat 551  Q
    ||||||||||||||||||||||||||  || || ||||||||||||    
T  7028847 ttttattaaagaaaaaataatactttgaaagtagtgtatatagtat 7028892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 462 - 535
Target Start/End: Original strand, 15083155 - 15083225
Alignment:
Q  462 agatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaag-aaaaaataatactttagaa 535  Q
    ||||||||||||| ||||||||| ||||||| ||||| ||    ||| ||||||| |||||||||||||||||||    
T  15083155 agatgttattttaccaaattatcataatcaattattgatt----tttcattaaagaaaaaaataatactttagaa 15083225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 395 - 444
Target Start/End: Complemental strand, 35799445 - 35799396
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgca 444  Q
    |||||||||||||||||||| |||| |||  || ||||||||||||||||    
T  35799445 ttttaaaatgaatgtcgttttaggtgtttacacacatattaagaaatgca 35799396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 469 - 535
Target Start/End: Original strand, 3501 - 3567
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaa 535  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  3501 attttatcaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttagaa 3567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 399 - 550
Target Start/End: Original strand, 9882 - 10033
Alignment:
Q  399 aaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattg 498  Q
    |||||||||||||||||| ||||||  ||  ||||||| |||||||||||||           ||||||||||||| ||||||||| ||||||||||||     
T  9882 aaaatgaatgtcgtttaaagtttttacacatatattaaaaaatgcattaattaaaagaaaaaaagatgttattttaccaaattatcttaatcaactatta 9981  T
Q  499 gtttgtcttttattaaagaaaaaataatactttagaaataatgtatatagta 550  Q
    |||||| |||  ||||||||||||||||| ||| ||| || |||||||||||    
T  9982 gtttgtttttccttaaagaaaaaataatatttttgaagtattgtatatagta 10033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 527
Target Start/End: Original strand, 9639 - 9697
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataata 527  Q
    |||||| ||||||||| |||||||||||||  |||| ||| ||||||||||||||||||    
T  9639 attttaccaaattatcataatcaactattgagttgtttttcattaaagaaaaaataata 9697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 464 - 547
Target Start/End: Original strand, 18247 - 18330
Alignment:
Q  464 atgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
    ||||||||||||||||||||  ||||||||||||||||||| ||| |||||||| |||||||||||||  ||||| ||||||||    
T  18247 atgttattttatcaaattattttaatcaactattggtttgtttttcattaaagataaaataatactttgaaaatagtgtatata 18330  T

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Target: scaffold0136 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 405 - 522
Target Start/End: Complemental strand, 9761 - 9647
Alignment:
Q  405 aatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaactattggtttgt 504  Q
    |||||||||||||||||||  || ||||||||||||| ||||||||           |||||||||||||  ||||||||||||||||||||||||||||    
T  9761 aatgtcgtttaaggtttttgcacacatattaagaaatacattaattaaaaaaat---agatgttattttactaaattatcctaatcaactattggtttgt 9665  T
Q  505 cttttattaaagaaaaaa 522  Q
     ||| |||||||||||||    
T  9664 ttttcattaaagaaaaaa 9647  T

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Target: scaffold0300 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 395 - 547
Target Start/End: Complemental strand, 4792 - 4642
Alignment:
Q  395 ttttaaaatgaatgtcgtttaaggtttttctacccatattaagaaatgcattaattnnnnnnnnnngagatgttattttatcaaattatcctaatcaact 494  Q
    ||||||||| ||||||||||||  |||||  || |||||||||||||||||||| |           ||||||||||||| |||| ||||||||||||||    
T  4792 ttttaaaataaatgtcgtttaaaatttttacacacatattaagaaatgcattaactaaaaaaaaa--agatgttattttaccaaactatcctaatcaact 4695  T
Q  495 attggtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
    |||| ||||| ||||||||||| ||| |||||| ||| ||| || ||||||||    
T  4694 attgatttgttttttattaaagtaaatataatattttggaagtagtgtatata 4642  T

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Target: scaffold0026 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 462 - 547
Target Start/End: Complemental strand, 4303 - 4218
Alignment:
Q  462 agatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
    |||| |||||||| ||||||||||| ||||||||||  ||||| ||||||||||| ||||| |||||||||||| || ||||||||    
T  4303 agatattattttaccaaattatccttatcaactattaatttgttttttattaaaggaaaaacaatactttagaagtagtgtatata 4218  T

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Target: scaffold0110 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 24737 - 24799
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatacttt 531  Q
    |||||| |||| |||||||||||||||||||||||| ||| ||||||||||| ||||||||||    
T  24737 attttaccaaactatcctaatcaactattggtttgtttttcattaaagaaaagataatacttt 24799  T

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Target: scaffold0983 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 461 - 547
Target Start/End: Original strand, 676 - 762
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
    |||||||||||||| ||||||||| ||||||||||||| | ||| ||| ||||||||||||| ||  |||| ||| || ||||||||    
T  676 gagatgttattttaccaaattatcttaatcaactattgatatgtttttcattaaagaaaaaacaagtctttggaattagtgtatata 762  T

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Target: scaffold0502 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 461 - 547
Target Start/End: Original strand, 561 - 647
Alignment:
Q  461 gagatgttattttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatactttagaaataatgtatata 547  Q
    ||||| |||||||| ||||||||| ||||||||||||| ||| | ||| ||||||  |||||||||||||| ||| || ||||||||    
T  561 gagatattattttaccaaattatcataatcaactattgatttctttttcattaaaacaaaaataatactttggaagtagtgtatata 647  T

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Target: scaffold0015 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 469 - 526
Target Start/End: Original strand, 21078 - 21135
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataat 526  Q
    |||||| ||||||||||||||||||||||||||||| ||| |||||| | ||||||||    
T  21078 attttaccaaattatcctaatcaactattggtttgtttttcattaaaaagaaaataat 21135  T

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Target: scaffold0048 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 469 - 528
Target Start/End: Complemental strand, 62789 - 62730
Alignment:
Q  469 attttatcaaattatcctaatcaactattggtttgtcttttattaaagaaaaaataatac 528  Q
    |||||| |||||| |||||||||||||||||||||| ||| ||||||||| || ||||||    
T  62789 attttaccaaattgtcctaatcaactattggtttgtttttcattaaagaagaagtaatac 62730  T

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