View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2662_high_50 (Length: 271)
Name: NF2662_high_50
Description: NF2662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2662_high_50 |
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Alignment Details
Target: chr3 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 21747391 - 21747613
Alignment:
| Q |
30 |
atgtgaccctaattgtcatgtggacttttgttaaacaaatgtcattgtagttggaaaacgatgaccaaagttacaaatgaaaaatatgcaggcataaaat |
129 |
Q |
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| T |
21747391 |
atgtgacactaactgttgtgtggactttcgtttaacaaatgtcgatgttgttggaaaacgatgagcaaagttacaaacagaaaatatgcaggcataaaat |
21747490 |
T |
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| Q |
130 |
ttgtaagaatttttccggttgttggtaaacgattgaaggaaattctttatattaaaacaaaagttatgtatttacaatgactaaatatttaactaataaa |
229 |
Q |
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||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21747491 |
ttgaaagaatttttccggttgttggtaaacaattgaaggaaattctttaaattaaaacaaaagttatgtatttacaatgactaaatatttaactaataaa |
21747590 |
T |
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| Q |
230 |
ctacaaatattctactaaaatct |
252 |
Q |
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| T |
21747591 |
ctacaaatattctactaaaatct |
21747613 |
T |
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