View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2662_high_62 (Length: 244)

Name: NF2662_high_62
Description: NF2662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2662_high_62
NF2662_high_62
[»] chr1 (25 HSPs)
chr1 (27-226)||(3701303-3701500)
chr1 (1-116)||(17414335-17414450)
chr1 (25-176)||(3468286-3468435)
chr1 (7-141)||(3696149-3696283)
chr1 (27-176)||(28574515-28574662)
chr1 (27-176)||(28598527-28598674)
chr1 (31-176)||(43359020-43359163)
chr1 (4-176)||(19311031-19311201)
chr1 (27-176)||(16051403-16051550)
chr1 (95-176)||(10186487-10186567)
chr1 (95-176)||(21431587-21431667)
chr1 (95-176)||(43358961-43359041)
chr1 (1-176)||(1188029-1188202)
chr1 (95-176)||(10185907-10185987)
chr1 (1-66)||(10186015-10186080)
chr1 (103-176)||(13654527-13654599)
chr1 (3-62)||(35653068-35653127)
chr1 (1-43)||(13654658-13654700)
chr1 (103-176)||(21431536-21431608)
chr1 (7-66)||(10186341-10186400)
chr1 (7-46)||(21430814-21430853)
chr1 (3-66)||(44523905-44523968)
chr1 (189-223)||(1188054-1188088)
chr1 (108-174)||(35653172-35653237)
chr1 (95-176)||(35626338-35626418)
[»] chr4 (27 HSPs)
chr4 (1-176)||(18716757-18716930)
chr4 (1-176)||(18737430-18737606)
chr4 (1-176)||(3409361-3409535)
chr4 (48-176)||(18671107-18671234)
chr4 (27-176)||(3424152-3424299)
chr4 (31-176)||(32429076-32429220)
chr4 (27-176)||(35091133-35091280)
chr4 (28-176)||(35096246-35096392)
chr4 (99-176)||(54859087-54859163)
chr4 (95-176)||(3409514-3409594)
chr4 (103-176)||(30019762-30019833)
chr4 (95-176)||(25618213-25618293)
chr4 (95-176)||(47071609-47071689)
chr4 (1-71)||(14643558-14643628)
chr4 (103-176)||(25618162-25618234)
chr4 (95-162)||(22118939-22119005)
chr4 (95-176)||(18671048-18671128)
chr4 (95-176)||(18716698-18716778)
chr4 (95-176)||(18737371-18737451)
chr4 (95-176)||(34279360-34279440)
chr4 (4-71)||(47071712-47071779)
chr4 (1-43)||(22119056-22119098)
chr4 (10-71)||(30019677-30019738)
chr4 (99-176)||(32429203-32429279)
chr4 (104-176)||(34279428-34279499)
chr4 (189-222)||(34279440-34279473)
chr4 (1-66)||(34601857-34601922)
[»] chr8 (11 HSPs)
chr8 (27-176)||(18494016-18494163)
chr8 (27-176)||(34108449-34108596)
chr8 (1-138)||(10340730-10340867)
chr8 (27-176)||(14318454-14318601)
chr8 (27-176)||(26986828-26986975)
chr8 (27-176)||(14314750-14314897)
chr8 (27-176)||(26981714-26981861)
chr8 (95-176)||(18608556-18608636)
chr8 (99-176)||(10340877-10340953)
chr8 (104-176)||(43956765-43956836)
chr8 (105-176)||(25953090-25953161)
[»] chr3 (27 HSPs)
chr3 (27-176)||(5481327-5481474)
chr3 (27-176)||(8464968-8465115)
chr3 (25-176)||(5457848-5457997)
chr3 (27-176)||(4050026-4050173)
chr3 (27-176)||(4055160-4055307)
chr3 (27-176)||(10672777-10672924)
chr3 (27-176)||(10677890-10678037)
chr3 (27-176)||(49784763-49784911)
chr3 (28-176)||(8458530-8458676)
chr3 (27-176)||(1302083-1302230)
chr3 (27-176)||(6852791-6852938)
chr3 (27-176)||(6857894-6858041)
chr3 (27-176)||(10584697-10584844)
chr3 (27-176)||(10591134-10591281)
chr3 (27-176)||(31081346-31081493)
chr3 (4-115)||(18023949-18024061)
chr3 (27-214)||(20891315-20891514)
chr3 (27-176)||(33702438-33702585)
chr3 (27-176)||(31076239-31076388)
chr3 (95-176)||(29827621-29827701)
chr3 (96-176)||(49784704-49784783)
chr3 (25-116)||(3187282-3187373)
chr3 (9-92)||(18023362-18023445)
chr3 (25-82)||(269487-269544)
chr3 (103-176)||(29827680-29827752)
chr3 (151-220)||(20891382-20891450)
chr3 (116-176)||(20891281-20891340)
[»] chr7 (8 HSPs)
chr7 (27-176)||(12857007-12857154)
chr7 (27-176)||(14610547-14610694)
chr7 (27-176)||(26051239-26051386)
chr7 (27-176)||(26056352-26056499)
chr7 (27-176)||(26060598-26060745)
chr7 (27-176)||(26065711-26065858)
chr7 (27-176)||(12851894-12852041)
chr7 (1-64)||(2248885-2248948)
[»] chr6 (10 HSPs)
chr6 (27-176)||(21275991-21276138)
chr6 (95-176)||(20752044-20752124)
chr6 (95-176)||(24508766-24508846)
chr6 (95-176)||(21936592-21936672)
chr6 (104-176)||(21937784-21937855)
chr6 (1-71)||(12909575-12909645)
chr6 (1-71)||(12934682-12934752)
chr6 (1-71)||(21936440-21936510)
chr6 (95-176)||(11183093-11183173)
chr6 (189-223)||(21937809-21937843)
[»] chr5 (15 HSPs)
chr5 (27-176)||(9872263-9872410)
chr5 (27-176)||(9877378-9877525)
chr5 (27-176)||(39904063-39904210)
chr5 (27-176)||(39909176-39909323)
chr5 (74-176)||(2023230-2023331)
chr5 (1-82)||(2024354-2024435)
chr5 (8-116)||(4555871-4555979)
chr5 (105-176)||(43540699-43540768)
chr5 (103-176)||(13556218-13556290)
chr5 (1-71)||(35368655-35368725)
chr5 (1-71)||(43540596-43540666)
chr5 (99-176)||(2023171-2023247)
chr5 (95-176)||(35368807-35368887)
chr5 (95-176)||(43379601-43379681)
chr5 (91-176)||(35368744-35368828)
[»] chr2 (11 HSPs)
chr2 (27-176)||(14917221-14917368)
chr2 (28-176)||(45120605-45120751)
chr2 (27-176)||(17720365-17720512)
chr2 (27-176)||(30283289-30283436)
chr2 (28-142)||(39178850-39178963)
chr2 (1-176)||(42780391-42780564)
chr2 (27-123)||(17720038-17720133)
chr2 (95-174)||(20892256-20892333)
chr2 (4-74)||(20892133-20892203)
chr2 (101-176)||(716472-716546)
chr2 (103-175)||(716532-716603)
[»] scaffold0223 (1 HSPs)
scaffold0223 (27-176)||(1858-2005)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-71)||(173664-173734)
[»] scaffold0006 (2 HSPs)
scaffold0006 (103-176)||(144288-144360)
scaffold0006 (1-43)||(144419-144461)


Alignment Details
Target: chr1 (Bit Score: 138; Significance: 3e-72; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 27 - 226
Target Start/End: Original strand, 3701303 - 3701500
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  3701303 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataatgaaccatagcattgattcaagtgtatctgatc 3701402  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagtnnnnnnntcttatgtatatgatcataacctttggcaaaagggtgttttct 226  Q
    |||||||||||  ||| || ||||||||||||||||| | ||||||||||       |||||||||||||||||||||||||||||||||||||||||||    
T  3701403 acaacctttgg-taaattgatgcttaatgaaccataatattgattcaagt-aaaaaatcttatgtatatgatcataacctttggcaaaagggtgttttct 3701500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 17414335 - 17414450
Alignment:
Q  1 tagaaccaaaagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaacca 100  Q
    ||||||||||| ||||||||||||| ||||||||||||||||| ||  ||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17414335 tagaaccaaaacttgtaactcttcaccaaaagttgtaactcttcattagaatcattcatatacattagaacattattatttactaatagataatgaacca 17414434  T
Q  101 tagcattgattcaagt 116  Q
    ||||||||||||||||    
T  17414435 tagcattgattcaagt 17414450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 25 - 176
Target Start/End: Complemental strand, 3468435 - 3468286
Alignment:
Q  25 atcaaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatga 124  Q
    |||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| ||||||     
T  3468435 atcaaaagttgtaattcttcataggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatgg 3468337  T
Q  125 tcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | | ||||||||||||||  ||||||||||||| ||| ||| ||||||||||    
T  3468336 ttataacctttggcaaaa-gggtgcttaatgaatcatgacattgattcaagt 3468286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 3696149 - 3696283
Alignment:
Q  7 caaaagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcat 106  Q
    ||||||||||||||||| ||||||||||| |||| || || |||| ||||||||||||||| |||||||||||||||  ||| |||| ||||||||  ||    
T  3696149 caaaagttgtaactctttatcaaaagttgcaacttttcatgggaatcattcatatacattaaaacattattatttaccgataaataatgaaccataatat 3696248  T
Q  107 tgattcaagtgtatatgatcacaacctttggcaaa 141  Q
    |||||||||| |||||  ||| |||||||||||||    
T  3696249 tgattcaagtttatatagtcataacctttggcaaa 3696283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 176
Target Start/End: Complemental strand, 28574662 - 28574515
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  28574662 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 28574564  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  28574563 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 28574515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 176
Target Start/End: Complemental strand, 28598674 - 28598527
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  28598674 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 28598576  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  28598575 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 28598527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 176
Target Start/End: Complemental strand, 43359163 - 43359020
Alignment:
Q  31 agttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatcacaa 130  Q
    ||||||||||||| ||  ||| |||||||||||||| ||||||||||||||| | || ||||| |||||||   ||||||||||||||||||| | | ||    
T  43359163 agttgtaactcttcatgagaatcattcatatacattggaacattattatttattgattgataatgaaccatgatattgattcaagtgtatatggttataa 43359064  T
Q  131 cctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||  ||||| ||||||||||||||| ||||||||||    
T  43359063 catttggcaaaa-gggtgc-taatgaaccataacattgattcaagt 43359020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 176
Target Start/End: Complemental strand, 19311201 - 19311031
Alignment:
Q  4 aaccaaaagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatag 103  Q
    |||||||||||||||||||||| ||| ||||||||||||| || |||| | |||||||||||| |||| || |     |    |  |||| ||||| |||    
T  19311201 aaccaaaagttgtaactcttcaccaagagttgtaactcttcatgggaatctttcatatacattggaacctt-tggcaaaggggtgcataatgaaccttag 19311103  T
Q  104 cattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    |||||||||||||||||||||||| ||||||||| ||||  |||||||||||||| |||||| ||||||||||    
T  19311102 cattgattcaagtgtatatgatcataacctttggtaaaa-gggtgcttaatgaactataacattgattcaagt 19311031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 176
Target Start/End: Complemental strand, 16051550 - 16051403
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    |||||||| ||||||||||| |||| ||||||||||||||| |||||| |  |  |   |||  ||| ||||||||||||||||||||||||||||||||    
T  16051550 caaaagttataactctttatgggaatcattcatatacattataacatt-tggtaaatggatacttaatgaaccatagcattgattcaagtgtatatgatc 16051452  T
Q  127 acaacctttggcaaaactg-gtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||| |||||||||  || ||||||||||||||||| || ||||||||||    
T  16051451 ataacatttggcaaa--tgagtgcttaatgaaccatatcattgattcaagt 16051403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 10186487 - 10186567
Alignment:
Q  95 gaaccatagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    ||||||||||||||||||||||||||||||||| |||||||| | |||  |||||||||||||||||| || || |||||||    
T  10186487 gaaccatagcattgattcaagtgtatatgatcataacctttgac-aaaggggtgcttaatgaaccatagcattggttcaagt 10186567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 21431587 - 21431667
Alignment:
Q  95 gaaccatagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    ||||| || ||||||||||||||| |||||||| ||||||||||||||  ||||||||||||||||||||| ||||| ||||    
T  21431587 gaaccttaacattgattcaagtgtgtatgatcataacctttggcaaaa-gggtgcttaatgaaccataacattgatttaagt 21431667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 176
Target Start/End: Complemental strand, 43359041 - 43358961
Alignment:
Q  95 gaaccatagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    |||||||| |||||||||||||||||||||||| |||||||||| |||  ||||||||||||| |||| || ||||||||||    
T  43359041 gaaccataacattgattcaagtgtatatgatcataacctttggc-aaaggggtgcttaatgaatcatagcattgattcaagt 43358961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 1188202 - 1188029
Alignment:
Q  1 tagaaccaaaagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaacca 100  Q
    |||||||||||||||||||| |||| ||| |||||||||| || || |||| | |||||||||||| ||||||| |     |   ||   ||| |||||     
T  1188202 tagaaccaaaagttgtaacttttcaccaagagttgtaactattcatgggaatctttcatatacattggaacatt-tggcaaaaggatgattaatgaacct 1188104  T
Q  101 tagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    |||||||||| |||||||||||||||| |||||||||| |||  |||| |||||||||||||||| | ||||||||    
T  1188103 tagcattgatacaagtgtatatgatcataacctttggc-aaatgggtgtttaatgaaccataacattaattcaagt 1188029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 176
Target Start/End: Complemental strand, 10185987 - 10185907
Alignment:
Q  95 gaaccatagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    ||||| |||| |||||||||||||||||| | | ||||||||||||||  |||||||||||||||||| || ||||||||||    
T  10185987 gaaccttagcgttgattcaagtgtatatggttataacctttggcaaaa-aggtgcttaatgaaccatatcattgattcaagt 10185907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10186080 - 10186015
Alignment:
Q  1 tagaaccaaaagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatatacatt 66  Q
    ||||| ||||||||||||||||||| ||| | |||||||||||||| |||| | ||||||||||||    
T  10186080 tagaatcaaaagttgtaactcttcaccaagaattgtaactctttatgggaatctttcatatacatt 10186015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 13654599 - 13654527
Alignment:
Q  103 gcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    ||||||| |||||||| |||||||| |||| |||||||||  ||| ||||||||||||||||| ||||||||||    
T  13654599 gcattgactcaagtgtgtatgatcataacccttggcaaaag-ggtacttaatgaaccataacattgattcaagt 13654527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 35653068 - 35653127
Alignment:
Q  3 gaaccaaaagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatata 62  Q
    ||||||||||||||||||||||| ||| ||||||||| ||| || |||| ||||||||||    
T  35653068 gaaccaaaagttgtaactcttcaccaagagttgtaacacttcatgggaatcattcatata 35653127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13654700 - 13654658
Alignment:
Q  1 tagaaccaaaagttgtaactcttcatcaaaagttgtaactctt 43  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  13654700 tagaaccaaaagttgtaactcttcaccaagagttgtaactctt 13654658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 21431536 - 21431608
Alignment:
Q  103 gcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    |||||||||||||||||||| || | |||||||||| |||  ||||||| ||||||| ||||| ||||||||||    
T  21431536 gcattgattcaagtgtatataattataacctttggc-aaatgggtgcttgatgaaccttaacattgattcaagt 21431608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 10186341 - 10186400
Alignment:
Q  7 caaaagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatatacatt 66  Q
    |||||||| |||||||||| ||| ||||||||||||| || |||| | ||||||||||||    
T  10186341 caaaagttttaactcttcaccaagagttgtaactcttcatgggaatctttcatatacatt 10186400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 21430814 - 21430853
Alignment:
Q  7 caaaagttgtaactcttcatcaaaagttgtaactctttat 46  Q
    |||||||||||||||||||||||||||| ||| |||||||    
T  21430814 caaaagttgtaactcttcatcaaaagttataattctttat 21430853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 44523905 - 44523968
Alignment:
Q  3 gaaccaaaagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatatacatt 66  Q
    |||||||||||||||| |||||   || ||||||||||||| || |||| ||||||||||||||    
T  44523905 gaaccaaaagttgtaaatcttcgctaagagttgtaactcttcatgggaatcattcatatacatt 44523968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 223
Target Start/End: Complemental strand, 1188088 - 1188054
Alignment:
Q  189 tgtatatgatcataacctttggcaaaagggtgttt 223  Q
    |||||||||||||||||||||||||| ||||||||    
T  1188088 tgtatatgatcataacctttggcaaatgggtgttt 1188054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 35653172 - 35653237
Alignment:
Q  108 gattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaa 174  Q
    |||||||||||||||||||| |||||||| | |||   ||||||||||||||||| || ||||||||    
T  35653172 gattcaagtgtatatgatcataacctttgac-aaaggagtgcttaatgaaccatatcattgattcaa 35653237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 176
Target Start/End: Complemental strand, 35626418 - 35626338
Alignment:
Q  95 gaaccatagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    ||||| ||||||||||||||| || ||| |||| ||| ||||||||||  |||| | |||||||||||||| |||| |||||    
T  35626418 gaaccttagcattgattcaagagtgtataatcataacttttggcaaaa-gggtgttaaatgaaccataacattgatgcaagt 35626338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 2e-42; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 18716930 - 18716757
Alignment:
Q  1 tagaaccaaaagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaacca 100  Q
    ||||||||||| | ||||||||||| ||| ||||||||||||| || ||||||||||||||||||| | ||||||||||||| | |||||||| ||||||    
T  18716930 tagaaccaaaact-gtaactcttcaccaagagttgtaactcttcatgggaaccattcatatacattggtacattattatttagtgatagataatgaacca 18716832  T
Q  101 tagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    |  |||||||||||||||||||| | | |||||||||| ||| | |||||||||||||||||||| ||||||||||    
T  18716831 tgacattgattcaagtgtatatggttataacctttggccaaa-tagtgcttaatgaaccataacattgattcaagt 18716757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 18737606 - 18737430
Alignment:
Q  1 tagaaccaaaagttgtaactct---tcatcaaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaa 97  Q
    ||||||||||| ||||||||||   ||| ||| ||||||||||||| || ||||||||||||||||||| | ||||||||||||| | |||||||| |||    
T  18737606 tagaaccaaaa-ttgtaactctaattcaccaagagttgtaactcttcatgggaaccattcatatacattggtacattattatttagtgatagataatgaa 18737508  T
Q  98 ccatagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    ||||  |||||||||||||||||||  | | |||||||||| ||| | |||||||||||||||||||| ||||||||||    
T  18737507 ccatgacattgattcaagtgtatattgttataacctttggctaaa-ttgtgcttaatgaaccataacattgattcaagt 18737430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 3409361 - 3409535
Alignment:
Q  1 tagaaccaaaagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaacca 100  Q
    |||||| ||||||||| |||||| | ||| | ||||||||||| ||  |||||||||||||||||| ||||||||||||||| | |||||||| ||||||    
T  3409361 tagaactaaaagttgttactcttgaccaagatttgtaactcttcatgagaaccattcatatacattggaacattattatttattgatagataatgaacca 3409460  T
Q  101 tagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    |  ||||||||||| ||| |||  | | ||||||||||||||  ||| ||||||||||||||||| ||||||||||    
T  3409461 tgacattgattcaaatgtgtatagttataacctttggcaaaa-gggtacttaatgaaccataacattgattcaagt 3409535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 18671234 - 18671107
Alignment:
Q  48 ggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatcacaacctttggcaaaactggt 147  Q
    ||||||||||||||||||| | ||||||||||||| | ||| |||| |||||||  |||||||| ||||||||||| | | |||||||||||||| ||||    
T  18671234 ggaaccattcatatacattggtacattattatttattgataaataatgaaccatgacattgatttaagtgtatatggttataacctttggcaaaa-tggt 18671136  T
Q  148 gcttaatgaaccataacaatgattcaagt 176  Q
    |||||||||||||||||| ||||||||||    
T  18671135 gcttaatgaaccataacattgattcaagt 18671107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 3424152 - 3424299
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| ||  ||||||| |||||||||| ||||||||||||||| | |||||||| |||||||  ||||||||||| ||| |||| |     
T  3424152 caaaagttgtaactcttcatgagaaccat-catatacattggaacattattatttattgatagataatgaaccatgacattgattcaaatgtgtatggtt 3424250  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||||||||||| ||||| ||||    
T  3424251 ataacctttggcaaaa-gggtgcttaatgaaccataacattgatttaagt 3424299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 176
Target Start/End: Original strand, 32429076 - 32429220
Alignment:
Q  31 agttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatcacaa 130  Q
    ||||||||||||| || | || |||||||||||||| ||||||||||||||| | |||||||| |||||||  || ||||||||||||||||| | | ||    
T  32429076 agttgtaactcttcatggaaatcattcatatacattggaacattattatttattgatagataatgaaccatgacaatgattcaagtgtatatggttataa 32429175  T
Q  131 cctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||  ||||||||||||| ||||||| ||||||||||    
T  32429176 catttggcaaaa-gggtgcttaatgaatcataacattgattcaagt 32429220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 176
Target Start/End: Complemental strand, 35091280 - 35091133
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  35091280 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 35091182  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  35091181 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 35091133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 176
Target Start/End: Complemental strand, 35096392 - 35096246
Alignment:
Q  28 aaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatca 127  Q
    |||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| | |    
T  35096392 aaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtta 35096294  T
Q  128 caacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
     ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  35096293 taacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 35096246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 54859087 - 54859163
Alignment:
Q  99 catagcattgattcaagtgtatatgatcacaacctttggcaaaactgg-tgcttaatgaaccataacaatgattcaagt 176  Q
    |||| |||||||||||||||||||||||| |||||||||||||  ||| ||||||||||||||||||| ||||||||||    
T  54859087 cataacattgattcaagtgtatatgatcataacctttggcaaa--tggatgcttaatgaaccataacattgattcaagt 54859163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 3409514 - 3409594
Alignment:
Q  95 gaaccatagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    |||||||| |||||||||||||||||||||||| |||||||||| |||  ||||||||||||| |||| || ||||||||||    
T  3409514 gaaccataacattgattcaagtgtatatgatcataacctttggc-aaaggggtgcttaatgaatcatagcattgattcaagt 3409594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 30019762 - 30019833
Alignment:
Q  103 gcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    |||||||||||||||| |||||||| ||||||||||||||  |||||||||||||||||||| |||||||||||    
T  30019762 gcattgattcaagtgtgtatgatcataacctttggcaaaa-aggtgcttaatgaaccataac-atgattcaagt 30019833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 25618213 - 25618293
Alignment:
Q  95 gaaccatagcattgattcaagtgtatatgatcacaacctttggcaaaactgg-tgcttaatgaaccataacaatgattcaagt 176  Q
    |||||||| |||||||||||||||||||||||| ||||||| ||  |||||| ||||||||||| ||||||| ||||||||||    
T  25618213 gaaccataacattgattcaagtgtatatgatcataacctttcgc--aactggatgcttaatgaatcataacattgattcaagt 25618293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 95 - 176
Target Start/End: Complemental strand, 47071689 - 47071609
Alignment:
Q  95 gaaccatagcattgattcaagtgtatatgatcacaacctttggcaaaactgg-tgcttaatgaaccataacaatgattcaagt 176  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||  ||| |||||||||||||||  || ||||||||||    
T  47071689 gaaccataacattgattcaagtgtatatgatcataacctttggcaaa--tggatgcttaatgaaccattgcattgattcaagt 47071609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 14643558 - 14643628
Alignment:
Q  1 tagaaccaaaagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatatacattagaac 71  Q
    ||||||||||||||||||||||||| ||| |||||||||| || || |||| |||||||||||||| ||||    
T  14643558 tagaaccaaaagttgtaactcttcaccaagagttgtaactattcatgggaatcattcatatacattggaac 14643628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 25618162 - 25618234
Alignment:
Q  103 gcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    ||||||||||||||||||||| | | ||| ||||||||||  ||||||||||||||||||||| ||||||||||    
T  25618162 gcattgattcaagtgtatatggttataacatttggcaaaag-ggtgcttaatgaaccataacattgattcaagt 25618234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 162
Target Start/End: Complemental strand, 22119005 - 22118939
Alignment:
Q  95 gaaccatagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccata 162  Q
    ||||| |||||||||||||||||||||||||| ||||||| ||| |||  ||||||||||||||||||    
T  22119005 gaaccttagcattgattcaagtgtatatgatcgcaaccttcggc-aaaggggtgcttaatgaaccata 22118939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 176
Target Start/End: Complemental strand, 18671128 - 18671048
Alignment:
Q  95 gaaccatagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    |||||||| |||||||||||||||||||||  | ||||||||| ||||  || ||||||||||||||| || ||||||||||    
T  18671128 gaaccataacattgattcaagtgtatatgaagataacctttggtaaaagagg-gcttaatgaaccatagcattgattcaagt 18671048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 176
Target Start/End: Complemental strand, 18716778 - 18716698
Alignment:
Q  95 gaaccatagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    |||||||| |||||||||||||||||||||||| ||| ||||| ||||   | ||||||||||||||| || ||||||||||    
T  18716778 gaaccataacattgattcaagtgtatatgatcataacttttggtaaaa-gagagcttaatgaaccatatcattgattcaagt 18716698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 176
Target Start/End: Complemental strand, 18737451 - 18737371
Alignment:
Q  95 gaaccatagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    |||||||| |||||||||||||||||||||||| ||| ||||| ||||   | ||||||||||||||| || ||||||||||    
T  18737451 gaaccataacattgattcaagtgtatatgatcataacttttggtaaaa-gagagcttaatgaaccatatcattgattcaagt 18737371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 34279360 - 34279440
Alignment:
Q  95 gaaccatagcattgattcaagtgtatatgatcacaacctttggcaaaactg-gtgcttaatgaaccataacaatgattcaagt 176  Q
    ||||| ||||||||||||||||||||||||| | |||||||||||||  || ||||||||| |||| ||||| ||||| ||||    
T  34279360 gaaccttagcattgattcaagtgtatatgattataacctttggcaaa--tgagtgcttaataaaccttaacattgatttaagt 34279440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 47071779 - 47071712
Alignment:
Q  4 aaccaaaagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatatacattagaac 71  Q
    |||||||||||||||||||||| ||| ||||||||||||| ||   || |||||||||||||| ||||    
T  47071779 aaccaaaagttgtaactcttcaccaagagttgtaactcttcatgaaaatcattcatatacattggaac 47071712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22119098 - 22119056
Alignment:
Q  1 tagaaccaaaagttgtaactcttcatcaaaagttgtaactctt 43  Q
    ||||||||||||||||||||||||||||| ||||| |||||||    
T  22119098 tagaaccaaaagttgtaactcttcatcaagagttgcaactctt 22119056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 30019677 - 30019738
Alignment:
Q  10 aagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatatacattagaac 71  Q
    |||||||||||||||| ||| ||||||||||||| || |||| | |||||||||||| ||||    
T  30019677 aagttgtaactcttcaccaagagttgtaactcttcatgggaatctttcatatacattggaac 30019738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 32429203 - 32429279
Alignment:
Q  99 catagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    |||| |||||||||||||||||||||||| |||||||| | |||  ||||||||||||| |||  || ||||||||||    
T  32429203 cataacattgattcaagtgtatatgatcataacctttgac-aaaggggtgcttaatgaatcatggcattgattcaagt 32429279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 34279428 - 34279499
Alignment:
Q  104 cattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    |||||||| ||||||||||||||| ||||||||| ||||  |||| | ||| |||||||||| ||||||||||    
T  34279428 cattgatttaagtgtatatgatcataacctttggtaaaa-gggtgttcaattaaccataacattgattcaagt 34279499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 222
Target Start/End: Original strand, 34279440 - 34279473
Alignment:
Q  189 tgtatatgatcataacctttggcaaaagggtgtt 222  Q
    |||||||||||||||||||||| |||||||||||    
T  34279440 tgtatatgatcataacctttggtaaaagggtgtt 34279473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 34601857 - 34601922
Alignment:
Q  1 tagaaccaaaagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatatacatt 66  Q
    |||||| ||||||||||||| ||||  | |||||||||||||| ||  ||| ||||||||||||||    
T  34601857 tagaactaaaagttgtaacttttcacgagaagttgtaactcttcatgagaatcattcatatacatt 34601922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 18494016 - 18494163
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  18494016 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 18494114  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| ||| ||| ||||||||||    
T  18494115 ataacctttggcaaaa-gggtgcttaatgaatcatgacattgattcaagt 18494163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 176
Target Start/End: Complemental strand, 34108596 - 34108449
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  34108596 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 34108498  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| ||| ||| ||||||||||    
T  34108497 ataacctttggcaaaa-gggtgcttaatgaatcatgacattgattcaagt 34108449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 10340730 - 10340867
Alignment:
Q  1 tagaaccaaaagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaacca 100  Q
    |||||||||||||||| | |||| | ||| ||||||||||||| || | ||||||||||||||||| ||||||||||||||| | |||||||| ||||||    
T  10340730 tagaaccaaaagttgttaatcttgaccaagagttgtaactcttcatggaaaccattcatatacattggaacattattatttattgatagataatgaacca 10340829  T
Q  101 tagcattgattcaagtgtatatgatcacaacctttggc 138  Q
    |  ||||||||||||||| |||| | | ||||||||||    
T  10340830 tgacattgattcaagtgtgtatggttataacctttggc 10340867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 14318454 - 14318601
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  14318454 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 14318552  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  14318553 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 14318601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 26986828 - 26986975
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  26986828 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 26986926  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  26986927 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 26986975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 14314750 - 14314897
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || |||||||||| |||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  14314750 caaaagttgtaactcttaatgggaaccattcgtatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 14314848  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  14314849 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 14314897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 26981714 - 26981861
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||| | |     
T  26981714 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatacggtt 26981812  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  26981813 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 26981861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 18608556 - 18608636
Alignment:
Q  95 gaaccatagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    ||||||||||| ||||||||||||||||| ||| |||||||||| |||  ||||||||||||||||||||| ||||||||||    
T  18608556 gaaccatagcagtgattcaagtgtatatgttcataacctttggc-aaaggggtgcttaatgaaccataacattgattcaagt 18608636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 10340877 - 10340953
Alignment:
Q  99 catagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    |||| |||||||||||||||||||||||| |||||||| |||||  ||||||||||||| |||| || ||||||||||    
T  10340877 cataacattgattcaagtgtatatgatcataacctttgacaaaa-gggtgcttaatgaatcatagcattgattcaagt 10340953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 43956765 - 43956836
Alignment:
Q  104 cattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    ||||||||||| |||||||||| | ||||||||||||||  ||||||||||||| |||| || ||||||||||    
T  43956765 cattgattcaaatgtatatgattataacctttggcaaaa-aggtgcttaatgaatcatagcattgattcaagt 43956836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 176
Target Start/End: Original strand, 25953090 - 25953161
Alignment:
Q  105 attgattcaagtgtatatgatcacaac-ctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    ||||||||||||||||||||||| |||  ||||||||||  | ||||||||||||||||| | ||||| ||||    
T  25953090 attgattcaagtgtatatgatcataacattttggcaaaa-ggatgcttaatgaaccataaaattgatttaagt 25953161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 5481327 - 5481474
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  5481327 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 5481425  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| ||| ||| ||||||||||    
T  5481426 ataacctttggcaaaa-gggtgcttaatgaatcatgacattgattcaagt 5481474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 176
Target Start/End: Complemental strand, 8465115 - 8464968
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  |||||| |||||| |||||| |     
T  8465115 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgactcaagtatatatggtt 8465017  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | |||||||||||||| |||||||||||||| ||| ||| ||||||||||    
T  8465016 ataacctttggcaaaa-tggtgcttaatgaatcatgacattgattcaagt 8464968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 176
Target Start/End: Original strand, 5457848 - 5457997
Alignment:
Q  25 atcaaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatga 124  Q
    ||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| ||||||     
T  5457848 atcaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatgg 5457946  T
Q  125 tcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | | |||| |||||||||  ||||||||||||| ||| ||| ||||||||||    
T  5457947 ttataacccttggcaaaa-gggtgcttaatgaatcatgacattgattcaagt 5457997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 176
Target Start/End: Complemental strand, 4050173 - 4050026
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  4050173 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 4050075  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  4050074 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 4050026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 176
Target Start/End: Complemental strand, 4055307 - 4055160
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  4055307 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 4055209  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  4055208 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 4055160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 10672777 - 10672924
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  10672777 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 10672875  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  10672876 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 10672924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 10677890 - 10678037
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  10677890 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 10677988  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  10677989 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 10678037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 176
Target Start/End: Complemental strand, 49784911 - 49784763
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || | || |||||||||||||| ||||||||||||||| | |||||||| |||||||  |||||||||||||||||||| |     
T  49784911 caaaagttgtaactcttcatggaaatcattcatatacattggaacattattatttattgatagataatgaaccatgacattgattcaagtgtatatggtt 49784812  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||| ||||||||||  ||||| |||| ||||||| || ||||||||||    
T  49784811 ataacatttggcaaaa-gggtgcataataaaccatatcattgattcaagt 49784763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 176
Target Start/End: Complemental strand, 8458676 - 8458530
Alignment:
Q  28 aaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatca 127  Q
    |||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||| ||||||||||||| |||||| | |    
T  8458676 aaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccataacattgattcaagtatatatggtta 8458578  T
Q  128 caacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
     ||||||||||||||  |||| |||||||| |||  || ||||||||||    
T  8458577 taacctttggcaaaa-gggtggttaatgaatcatggcattgattcaagt 8458530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 1302083 - 1302230
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||| ||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  1302083 caaaagttgtaactcttcatgggaaccattcatatatattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 1302181  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  1302182 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 1302230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 6852791 - 6852938
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  6852791 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 6852889  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||| ||||| |||  || ||||||||||    
T  6852890 ataacctttggcaaaa-gggtgcttgatgaatcatggcattgattcaagt 6852938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 6857894 - 6858041
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  6857894 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 6857992  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||| ||||| |||  || ||||||||||    
T  6857993 ataacctttggcaaaa-gggtgcttgatgaatcatggcattgattcaagt 6858041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 10584697 - 10584844
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||| | |||||| |     
T  10584697 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaaatatatatggtt 10584795  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  10584796 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 10584844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 10591134 - 10591281
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  10591134 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 10591232  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||| ||||  ||||||||||||| |||  || ||||||||||    
T  10591233 ataacctttggtaaaa-gggtgcttaatgaatcatggcattgattcaagt 10591281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 31081346 - 31081493
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    |||||||||| |||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  31081346 caaaagttgtgactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 31081444  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  31081445 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 31081493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 18023949 - 18024061
Alignment:
Q  4 aaccaaaagttgtaactcttcatcaaaag-ttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccata 102  Q
    |||||||||||||||||  ||| |||||| ||||||||||| ||||||| || ||||||||||| ||||||||||||||||| |||||||   |||||||    
T  18023949 aaccaaaagttgtaactaatcaccaaaaggttgtaactcttcataggaatcaatcatatacattggaacattattatttactgatagatattaaaccata 18024048  T
Q  103 gcattgattcaag 115  Q
    |||||||||||||    
T  18024049 gcattgattcaag 18024061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 214
Target Start/End: Complemental strand, 20891514 - 20891315
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaag----------- 115  Q
    ||||||||||||||||| ||  ||| ||||||||||||||  || ||||||||||||| |||||||| |||||||| ||||||||||||               
T  20891514 caaaagttgtaactcttcatgagaatcattcatatacattgaaaaattattatttactgatagataatgaaccataacattgattcaagtaaaaaatcta 20891415  T
Q  116 -tgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt-nnnnnnntcttatgtatatgatcataacctttggcaa 213  Q
     ||||||||| || ||||||||||||||  |||||||||||||||||| || ||||||||||        ||| ||||||||||||||||||||||||||    
T  20891414 atgtatatgaccataacctttggcaaaa-gggtgcttaatgaaccatagcattgattcaagtaaaacaaatctgatgtatatgatcataacctttggcaa 20891316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 33702438 - 33702585
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||  ||||||||||||||| || || |||| |||||||  ||||||||||||| |||| | |     
T  33702438 caaaagttgtaactcttcatgggaaccattcatatacataggaacattattatttattatta-ataatgaaccatgacattgattcaagtatataaggtt 33702536  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  33702537 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 33702585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 31076239 - 31076388
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttact-aatagataaggaaccatagcattgattcaagtgtatatgat 125  Q
    |||||||||| |||||| || | ||||||||||||||||| ||||||||||||||| |  ||  |||| |||||||  ||||||||||||| |||||| |    
T  31076239 caaaagttgtgactcttcatggaaaccattcatatacattggaacattattatttattgtattaataatgaaccatgacattgattcaagtatatatggt 31076338  T
Q  126 cacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
     | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  31076339 tataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 31076388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 176
Target Start/End: Complemental strand, 29827701 - 29827621
Alignment:
Q  95 gaaccatagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    ||||| |||||||||||||||||| |||| ||| || ||||||||||| |||||||||||||| ||||||| ||||||||||    
T  29827701 gaaccttagcattgattcaagtgtgtatggtcataatctttggcaaaa-tggtgcttaatgaatcataacattgattcaagt 29827621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 49784783 - 49784704
Alignment:
Q  96 aaccatagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    ||||||| |||||||||||||||||||||||| || ||||||| |||  ||||||||||||| ||||||| ||||||||||    
T  49784783 aaccatatcattgattcaagtgtatatgatcataagctttggc-aaatgggtgcttaatgaatcataacattgattcaagt 49784704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 3187282 - 3187373
Alignment:
Q  25 atcaaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagt 116  Q
    |||||||||||||| | |||||  ||| ||||||||| |||| ||||| ||||||||||| |||||||| |||| ||| |||||||||||||    
T  3187282 atcaaaagttgtaattttttatgagaatcattcatatgcattggaacaatattatttactgatagataatgaactataacattgattcaagt 3187373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 18023362 - 18023445
Alignment:
Q  9 aaagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagata 92  Q
    |||||||||| |||| | || || ||| |||| || ||||||| |||||||||| ||||||||||||||||||||| |||||||    
T  18023362 aaagttgtaagtctttaccagaaattgcaacttttcataggaatcattcatatatattagaacattattatttactgatagata 18023445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 269544 - 269487
Alignment:
Q  25 atcaaaagttgtaactctttataggaaccattcatatacattagaacattattattta 82  Q
    ||||||||||||| |||||||| | ||||||||||||| ||| |||||||||||||||    
T  269544 atcaaaagttgtagctctttatggaaaccattcatatatattggaacattattattta 269487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 29827752 - 29827680
Alignment:
Q  103 gcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    ||||||||||||||||||||||| | ||| |||| | ||| |||||||||||||||| || || ||||||||||    
T  29827752 gcattgattcaagtgtatatgattataacatttgac-aaattggtgcttaatgaaccttagcattgattcaagt 29827680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 20891450 - 20891382
Alignment:
Q  151 taatgaaccataacaatgattcaagtnnnnnnntcttatgtatatgatcataacctttggcaaaagggtg 220  Q
    ||||||||||||||| ||||||||||       ||| |||||||||| ||||||||||||||||||||||    
T  20891450 taatgaaccataacattgattcaagtaaaaaa-tctaatgtatatgaccataacctttggcaaaagggtg 20891382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 20891340 - 20891281
Alignment:
Q  116 tgtatatgatcacaacctttggcaaaactggt-gcttaatgaaccataacaatgattcaagt 176  Q
    |||||||||||| |||||||||||||  |||| ||||||||||||||| || ||||||||||    
T  20891340 tgtatatgatcataacctttggcaaa--tggttgcttaatgaaccatatcattgattcaagt 20891281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 176
Target Start/End: Complemental strand, 12857154 - 12857007
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  12857154 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 12857056  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  12857055 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 12857007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 176
Target Start/End: Complemental strand, 14610694 - 14610547
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  14610694 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 14610596  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  14610595 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 14610547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 176
Target Start/End: Complemental strand, 26051386 - 26051239
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  26051386 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 26051288  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  26051287 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 26051239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 176
Target Start/End: Complemental strand, 26056499 - 26056352
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| | || ||||| |||||||  ||||||||||||| |||||| |     
T  26056499 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattattta-ttattgataatgaaccatgacattgattcaagtatatatggtt 26056401  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  26056400 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 26056352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 176
Target Start/End: Complemental strand, 26060745 - 26060598
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  26060745 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 26060647  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  26060646 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 26060598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 176
Target Start/End: Complemental strand, 26065858 - 26065711
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| | || ||||| |||||||  ||||||||||||| |||||| |     
T  26065858 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattattta-ttattgataatgaaccatgacattgattcaagtatatatggtt 26065760  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  26065759 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 26065711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 176
Target Start/End: Complemental strand, 12852041 - 12851894
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || |||||||||||||||||||   ||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  12852041 caaaagttgtaactcttcatgggaaccattcatatacattgttacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 12851943  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| ||| ||| ||||||||||    
T  12851942 ataacctttggcaaaa-gggtgcttaatgaatcatgacattgattcaagt 12851894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 2248885 - 2248948
Alignment:
Q  1 tagaaccaaaagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatataca 64  Q
    ||||||||||||| ||||||||||| ||| ||||||||||||| ||| ||||||||||||||||    
T  2248885 tagaaccaaaagtagtaactcttcagcaagagttgtaactcttcatacgaaccattcatataca 2248948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 3e-29; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 176
Target Start/End: Complemental strand, 21276138 - 21275991
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  21276138 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 21276040  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  21276039 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 21275991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 20752044 - 20752124
Alignment:
Q  95 gaaccatagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    ||||| |||||||||||||||||||||||  || |||||||| ||||| |||||||||||||||||||||| ||||||||||    
T  20752044 gaaccttagcattgattcaagtgtatatggccataacctttgacaaaa-tggtgcttaatgaaccataacattgattcaagt 20752124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 24508766 - 24508846
Alignment:
Q  95 gaaccatagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    ||||| ||||||| ||||||||||||| ||||| ||||||||||||||  ||||||||||||||||||||| ||||||||||    
T  24508766 gaaccttagcattaattcaagtgtataagatcataacctttggcaaaa-gggtgcttaatgaaccataacattgattcaagt 24508846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 21936592 - 21936672
Alignment:
Q  95 gaaccatagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    ||||| ||| ||| ||||||||||||||||||| ||||||||||||||  |||||||||| |||||||||| ||||||||||    
T  21936592 gaaccttagaatttattcaagtgtatatgatcataacctttggcaaaa-aggtgcttaataaaccataacattgattcaagt 21936672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 21937855 - 21937784
Alignment:
Q  104 cattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    |||||||||||||||||||||||| ||||||||||||||  |||| |||||||||||| ||| ||||||||||    
T  21937855 cattgattcaagtgtatatgatcataacctttggcaaaa-gggtgtttaatgaaccatcacattgattcaagt 21937784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 12909645 - 12909575
Alignment:
Q  1 tagaaccaaaagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatatacattagaac 71  Q
    ||||||||||||||||||||||||| ||| |||||||||| || ||  ||| |||||||||||||| ||||    
T  12909645 tagaaccaaaagttgtaactcttcaccaagagttgtaacttttcatgagaatcattcatatacattggaac 12909575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 12934752 - 12934682
Alignment:
Q  1 tagaaccaaaagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatatacattagaac 71  Q
    ||||||||||||||||||||||||| ||| |||||||||| || ||  ||| |||||||||||||| ||||    
T  12934752 tagaaccaaaagttgtaactcttcaccaagagttgtaacttttcatgagaatcattcatatacattggaac 12934682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 21936440 - 21936510
Alignment:
Q  1 tagaaccaaaagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatatacattagaac 71  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||| | || | || ||||||||| ||||    
T  21936440 tagaaccaaaagttgtaactcttcaccaagagttgtaactctttatggaaatcttttatatacatttgaac 21936510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 11183093 - 11183173
Alignment:
Q  95 gaaccatagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    ||||| |||| |||||||||||||||||||||| |||||||| ||||   | || |||||||||||||||| ||||||||||    
T  11183093 gaaccttagccttgattcaagtgtatatgatcataacctttgacaaagg-gatgtttaatgaaccataacactgattcaagt 11183173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 223
Target Start/End: Complemental strand, 21937843 - 21937809
Alignment:
Q  189 tgtatatgatcataacctttggcaaaagggtgttt 223  Q
    |||||||||||||||||||||||||||||||||||    
T  21937843 tgtatatgatcataacctttggcaaaagggtgttt 21937809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 9872263 - 9872410
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  9872263 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 9872361  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  9872362 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 9872410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 9877378 - 9877525
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  9877378 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 9877476  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  9877477 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 9877525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 176
Target Start/End: Complemental strand, 39904210 - 39904063
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  39904210 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 39904112  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | |||||||||||||| | |||||||||||| |||  || ||||||||||    
T  39904111 ataacctttggcaaaa-tagtgcttaatgaatcatggcattgattcaagt 39904063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 176
Target Start/End: Complemental strand, 39909323 - 39909176
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    |||||||||||||||||  |   ||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  39909323 caaaagttgtaactcttcgtgtaaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 39909225  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  39909224 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 39909176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 2023331 - 2023230
Alignment:
Q  74 tattatttactaatagataaggaaccatagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattca 173  Q
    ||||||||| | |||||||| |||||||  ||||||||||||||| |||| | | ||||||||||||||  ||||||||||||| ||||||| |||||||    
T  2023331 tattatttattgatagataatgaaccatgacattgattcaagtgtgtatggttataacctttggcaaaa-gggtgcttaatgaatcataacattgattca 2023233  T
Q  174 agt 176  Q
    |||    
T  2023232 agt 2023230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 2024435 - 2024354
Alignment:
Q  1 tagaaccaaaagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatatacattagaacattattattta 82  Q
    |||||||||||||||| | |||| | ||| ||||||||||||| |  ||||||||||||||||||| |||||||||||||||    
T  2024435 tagaaccaaaagttgttaatcttgaccaagagttgtaactcttcacgggaaccattcatatacattggaacattattattta 2024354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 4555979 - 4555871
Alignment:
Q  8 aaaagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcatt 107  Q
    ||||||||||||| || |||||||||| || ||||| |  | || ||||||||||||||  || ||||||||||||| |||||||  |||||||| ||||    
T  4555979 aaaagttgtaactttttatcaaaagttatacctcttcacggaaatcattcatatacattgaaaaattattatttacttatagatagtgaaccataacatt 4555880  T
Q  108 gattcaagt 116  Q
    |||||||||    
T  4555879 gattcaagt 4555871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 176
Target Start/End: Original strand, 43540699 - 43540768
Alignment:
Q  105 attgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    ||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||||||| ||| ||||||    
T  43540699 attgattcaagtgtatatgatcataacctttgacaaaa--ggtgcttaatgaaccataacattgactcaagt 43540768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 13556218 - 13556290
Alignment:
Q  103 gcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    ||||||||||||||||||||||| | ||||||||||||||  ||||||||||||| |||| || ||||||||||    
T  13556218 gcattgattcaagtgtatatgattataacctttggcaaaa-aggtgcttaatgaatcatagcattgattcaagt 13556290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 35368655 - 35368725
Alignment:
Q  1 tagaaccaaaagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatatacattagaac 71  Q
    ||||| |||||||||||||| |||||||| ||||||||||||||||  ||| | |||||||||||| ||||    
T  35368655 tagaatcaaaagttgtaacttttcatcaagagttgtaactctttatgagaatctttcatatacattggaac 35368725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 43540596 - 43540666
Alignment:
Q  1 tagaaccaaaagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatatacattagaac 71  Q
    ||||||||||||||||||||||||| ||| ||||||||||||| || | ||  ||||||||||||| ||||    
T  43540596 tagaaccaaaagttgtaactcttcaccaagagttgtaactcttcatggtaattattcatatacattggaac 43540666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 2023247 - 2023171
Alignment:
Q  99 catagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    |||| |||||||||||||||||||||||| |||||||| | |||  |||| |||||||| ||||||| ||||||||||    
T  2023247 cataacattgattcaagtgtatatgatcataacctttgac-aaatgggtgtttaatgaatcataacattgattcaagt 2023171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 35368807 - 35368887
Alignment:
Q  95 gaaccatagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    ||||| ||||||||||||||||||||||||||| ||| ||||  ||||  |||| |||||||| ||||||| ||||||||||    
T  35368807 gaaccttagcattgattcaagtgtatatgatcataacatttgataaaa-aggtgtttaatgaatcataacattgattcaagt 35368887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 176
Target Start/End: Complemental strand, 43379681 - 43379601
Alignment:
Q  95 gaaccatagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    ||||| ||||||||||||||||||||||||||| || |||||| ||||   ||||||| |||| ||||||| ||||||||||    
T  43379681 gaaccgtagcattgattcaagtgtatatgatcataaactttggtaaaa-gagtgcttagtgaatcataacattgattcaagt 43379601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 35368744 - 35368828
Alignment:
Q  91 taaggaaccatagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    ||| ||||| ||||||||||| ||||||||||||| | |||||||| | |||  ||||||||||||||| || || ||||||||||    
T  35368744 taatgaaccttagcattgatttaagtgtatatgattataacctttgac-aaagaggtgcttaatgaaccttagcattgattcaagt 35368828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 14917221 - 14917368
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  14917221 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 14917319  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  14917320 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 14917368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 176
Target Start/End: Complemental strand, 45120751 - 45120605
Alignment:
Q  28 aaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatca 127  Q
    |||||||||||||||| || |||||||||||||||||||  |||||||||||||| || || |||| |||||||  ||||||||||||| |||||| | |    
T  45120751 aaaagttgtaactcttcatgggaaccattcatatacattgaaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtta 45120653  T
Q  128 caacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
     ||||||||||||||  ||||||||||||| ||| ||| ||||||||||    
T  45120652 taacctttggcaaaa-gggtgcttaatgaatcatgacattgattcaagt 45120605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 17720365 - 17720512
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  |||||||| |||| |||||| |     
T  17720365 caaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattgaagtatatatggtt 17720463  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  17720464 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 17720512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 30283289 - 30283436
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||||||||| || |||||||||||| |||||| ||||||||||||||| | || ||||  |||||||  ||||||||||||| |||||| |     
T  30283289 caaaagttgtaactcttcatgggaaccattcatgtacattggaacattattattta-ttattgatactgaaccatgacattgattcaagtatatatggtt 30283387  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | || |||||||||||  ||||||||||||||||||| | ||||||||||    
T  30283388 ataatctttggcaaaa-gggtgcttaatgaaccataatattgattcaagt 30283436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 142
Target Start/End: Complemental strand, 39178963 - 39178850
Alignment:
Q  28 aaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatca 127  Q
    |||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| |||||| | |    
T  39178963 aaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatggtta 39178865  T
Q  128 caacctttggcaaaa 142  Q
     ||||||||||||||    
T  39178864 taacctttggcaaaa 39178850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 42780564 - 42780391
Alignment:
Q  1 tagaaccaaaagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagat----aagga 96  Q
    |||||||||||||||| |||||| | ||||||||||||||||| ||  ||| | |||||||||||| |||| ||     |  | ||||| |    || ||    
T  42780564 tagaaccaaaagttgttactcttgaccaaaagttgtaactcttcatgagaatctttcatatacattggaacttt-----tagcaaataggtgcttaatga 42780470  T
Q  97 accatagcattgattcaagtgtatatgatcacaacctttggcaaaactggt-gcttaatgaaccataacaatgattcaagt 176  Q
    |||||| |||||||||||||||||||||||| |||||||||||||  |||| |||||||||||||||||| ||||||||||    
T  42780469 accataacattgattcaagtgtatatgatcataacctttggcaaa--tggtggcttaatgaaccataacattgattcaagt 42780391  T

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Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 17720038 - 17720133
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatg 123  Q
    ||||||||||||||||| || ||||| ||||||||||||| ||||||||||||||| || || |||| |||||||  ||||||||||||| ||||||    
T  17720038 caaaagttgtaactcttcatgggaactattcatatacattggaacattattatttattatta-ataatgaaccatgacattgattcaagtatatatg 17720133  T

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Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 174
Target Start/End: Original strand, 20892256 - 20892333
Alignment:
Q  95 gaaccatagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaa 174  Q
    |||||||| |||||||||||||||||||||||| ||| |||| |||||  |||||||||||||||| |||| ||||||||    
T  20892256 gaaccataacattgattcaagtgtatatgatcataacatttgccaaaa-aggtgcttaatgaacca-aacattgattcaa 20892333  T

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Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 20892133 - 20892203
Alignment:
Q  4 aaccaaaagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatatacattagaacatt 74  Q
    |||||||||||||| || |||| ||| ||||||||||||| ||  |||||||||||||||||| |||||||    
T  20892133 aaccaaaagttgtatcttttcaccaagagttgtaactcttcatgagaaccattcatatacattggaacatt 20892203  T

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Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 716546 - 716472
Alignment:
Q  101 tagcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    ||||||||||||||| || |||||||| ||||||||||||||  |||| |||||| ||| ||||| ||||||||||    
T  716546 tagcattgattcaagagtgtatgatcataacctttggcaaaa-aggtgtttaatggaccgtaacattgattcaagt 716472  T

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Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 175
Target Start/End: Complemental strand, 716603 - 716532
Alignment:
Q  103 gcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaag 175  Q
    ||||||||||||||||||||||| | |||||||||  |||  ||||||||||||| | || || |||||||||    
T  716603 gcattgattcaagtgtatatgattataacctttgg-taaaggggtgcttaatgaagcttagcattgattcaag 716532  T

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Target: scaffold0223 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 1858 - 2005
Alignment:
Q  27 caaaagttgtaactctttataggaaccattcatatacattagaacattattatttactaatagataaggaaccatagcattgattcaagtgtatatgatc 126  Q
    ||||||||||| ||||| || ||||||||||||||||||| |||||||| |||||| || || |||| |||||||  ||||||||||||| |||||| |     
T  1858 caaaagttgtatctcttcatgggaaccattcatatacattggaacattactatttattatta-ataatgaaccatgacattgattcaagtatatatggtt 1956  T
Q  127 acaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    | ||||||||||||||  ||||||||||||| |||  || ||||||||||    
T  1957 ataacctttggcaaaa-gggtgcttaatgaatcatggcattgattcaagt 2005  T

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Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 173734 - 173664
Alignment:
Q  1 tagaaccaaaagttgtaactcttcatcaaaagttgtaactctttataggaaccattcatatacattagaac 71  Q
    ||||||||||||||||||||||||| ||| |||||||||| || || |||| |||||||||||||| ||||    
T  173734 tagaaccaaaagttgtaactcttcaccaagagttgtaactattcatgggaatcattcatatacattggaac 173664  T

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Target: scaffold0006 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 144360 - 144288
Alignment:
Q  103 gcattgattcaagtgtatatgatcacaacctttggcaaaactggtgcttaatgaaccataacaatgattcaagt 176  Q
    ||||||| |||||||| |||||||| |||| |||||||||  ||| ||||||||||||||||| ||||||||||    
T  144360 gcattgactcaagtgtgtatgatcataacccttggcaaaag-ggtacttaatgaaccataacattgattcaagt 144288  T

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Target: scaffold0006; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 144461 - 144419
Alignment:
Q  1 tagaaccaaaagttgtaactcttcatcaaaagttgtaactctt 43  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  144461 tagaaccaaaagttgtaactcttcaccaagagttgtaactctt 144419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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