View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2662_low_39 (Length: 325)
Name: NF2662_low_39
Description: NF2662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2662_low_39 |
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Alignment Details
Target: chr5 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 21 - 307
Target Start/End: Complemental strand, 32610394 - 32610108
Alignment:
| Q |
21 |
ttcgtcgcttgtgtatatataatgtacatcttcatacttgaaagtttaatctatgtatacgagactcaagagagtccaaaaatgccatgcagaaaattat |
120 |
Q |
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| T |
32610394 |
ttcgtcgcttgtgtatatataatgtacatcttcatacttgaaagttgaatctatgtatacgagactcaagagagtccaaaaatgccatgcagaaaattat |
32610295 |
T |
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| Q |
121 |
gagttcttgtgcgagaaatataccgtacactagaatattacataatttaatcattttattattgtgtttgcacctaataattgnnnnnnnnctttatatt |
220 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
32610294 |
gagttcttgtgcgagaaatataccgtacgctagaatattacataatctaatcattttattattgtgtttgcacctaataattgttttttttctttatatt |
32610195 |
T |
|
| Q |
221 |
ttcatggacttagctacttctattttgtatcgttccctatggatattcatcaccatcattccctccttacataatgcatacgtatat |
307 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||| |
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| T |
32610194 |
ttcatggacttagctacttctattttgtatcgttccctatggatattcaccaccatcattccctcctcacataatggatacgtatat |
32610108 |
T |
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