View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2662_low_50 (Length: 279)
Name: NF2662_low_50
Description: NF2662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2662_low_50 |
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Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 3 - 261
Target Start/End: Complemental strand, 45567024 - 45566766
Alignment:
| Q |
3 |
tcttttctagtcctcatcttttataaaaattgagcactttcttaggggctaaatttgttaaatagtcactaaatttaaaataaatgctagttttagggac |
102 |
Q |
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| T |
45567024 |
tcttttctagtcctcatcttttataaaaattgagcactttcttaggggctaaatttgttaaatagtcactaaatttaaaataaatgctagttttagggac |
45566925 |
T |
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| Q |
103 |
taaatatactcaaccatatggacagtacagctaacatccaatatgttggatctaattgaaataactaattgcgttgnnnnnnntattaactatgtagctc |
202 |
Q |
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| T |
45566924 |
taaatatactcaaccatatggacagtacagctaacatccaatatgttggatataattgaaataactaattgtgttgaaaaaaatattaactatgtagctc |
45566825 |
T |
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| Q |
203 |
aagttgactgtgttactttatatcaaaatgaaaggatgtcatgatcggagttcgaacct |
261 |
Q |
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| T |
45566824 |
aagttgactgtgttaatttataccaatatgaaagtatgtcatgaccggagttcgaacct |
45566766 |
T |
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