View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2662_low_60 (Length: 249)
Name: NF2662_low_60
Description: NF2662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2662_low_60 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 43863241 - 43863005
Alignment:
| Q |
1 |
ccacgaaccctgaccgaatcggtattttttggacactcaactcaattccagtcaataactacacatttgcttgcttcacacaaatttaaaagtaaaataa |
100 |
Q |
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| T |
43863241 |
ccacgaacccagaccgaatcggtattttttggacactcaactcaattccagtcaataactacacatttgcttgcttcacacaaatttaaaagtaaaataa |
43863142 |
T |
|
| Q |
101 |
atggaaagatagtattatcaacttattgttttcaagtgtatttatgttcatttggtcaaaaagtataggttcatattcaacattatcataaatgaaaagt |
200 |
Q |
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| T |
43863141 |
atggaaagatagtattatcaacttattgttttcaagtgtatatatgttcatttggtcaaaaagtataggttcatattcaacattattataaatgaaaagt |
43863042 |
T |
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| Q |
201 |
gtaataatgacttaaaagtgactcacatataatagta |
237 |
Q |
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| T |
43863041 |
gtaataatgacttacaagtgactcacatatagtagta |
43863005 |
T |
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