View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2662_low_66 (Length: 242)
Name: NF2662_low_66
Description: NF2662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2662_low_66 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 51 - 242
Target Start/End: Original strand, 32335416 - 32335608
Alignment:
| Q |
51 |
acaatatcaaaattgttaaattgaacgtcttaattcgattttaaactcgatacttaatagtatttgtgtat-tgagtttgagatggtgtttgttgtttca |
149 |
Q |
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| T |
32335416 |
acaatatcaaaattgttaaattgaatgtattaattcaattttaaactcggtacttaatagtatttgtgtatgtgagtttgagatggtgtttgttgtttca |
32335515 |
T |
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| Q |
150 |
tttaggaagataaaaactgtatgcggaaaaaatgataaaggaatgtgtattaaatgtaaatatattttttaggagatgtattaaatctaaata |
242 |
Q |
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| T |
32335516 |
tttatgaagataaaaactgtatgcgaaaaaaatgataaaggtacgtgtgttaaatgtaaatatatttttttggagatgtattaaatctaaata |
32335608 |
T |
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