View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2662_low_8 (Length: 658)

Name: NF2662_low_8
Description: NF2662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2662_low_8
NF2662_low_8
[»] scaffold0135 (7 HSPs)
scaffold0135 (419-644)||(1865-2090)
scaffold0135 (419-644)||(6080-6305)
scaffold0135 (419-644)||(10295-10520)
scaffold0135 (419-644)||(14510-14735)
scaffold0135 (419-644)||(18725-18950)
scaffold0135 (419-644)||(22940-23165)
scaffold0135 (419-644)||(27155-27380)
[»] chr4 (6 HSPs)
chr4 (419-644)||(9203782-9204007)
chr4 (419-644)||(9208001-9208226)
chr4 (173-325)||(35902676-35902828)
chr4 (134-325)||(23892461-23892653)
chr4 (405-524)||(37617280-37617399)
chr4 (535-565)||(14863498-14863528)
[»] chr6 (1 HSPs)
chr6 (405-524)||(22082576-22082695)
[»] chr5 (1 HSPs)
chr5 (405-524)||(40164687-40164805)
[»] chr1 (2 HSPs)
chr1 (405-519)||(6921531-6921646)
chr1 (405-519)||(38238232-38238347)
[»] chr3 (2 HSPs)
chr3 (409-524)||(45456467-45456583)
chr3 (454-524)||(19767547-19767617)
[»] chr2 (1 HSPs)
chr2 (405-524)||(7827716-7827835)


Alignment Details
Target: scaffold0135 (Bit Score: 173; Significance: 1e-92; HSPs: 7)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 419 - 644
Target Start/End: Complemental strand, 2090 - 1865
Alignment:
Q  419 catcaaacacaatgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatacacttttggttcatgcctaaagtttatatgtagaat 518  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  2090 catcaaacacaatgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaat 1991  T
Q  519 cttttcnnnnnnntaatacagttgagtttagatttgttccaatatcaagacaaagcattccataatccatactatcagtttagtttgcattgtatgctac 618  Q
    ||||||       |||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  1990 cttttcaaaaaaataatacagctgagttcagagttgttccaatatcaagacaaagcattccataatccatactatcagttaagtttgcattgtatgctac 1891  T
Q  619 ctaaggctatcatgtgttctaaatga 644  Q
    |||||||||||  |||||||||||||    
T  1890 ctaaggctatcccgtgttctaaatga 1865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #2
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 419 - 644
Target Start/End: Complemental strand, 6305 - 6080
Alignment:
Q  419 catcaaacacaatgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatacacttttggttcatgcctaaagtttatatgtagaat 518  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  6305 catcaaacacaatgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaat 6206  T
Q  519 cttttcnnnnnnntaatacagttgagtttagatttgttccaatatcaagacaaagcattccataatccatactatcagtttagtttgcattgtatgctac 618  Q
    ||||||       |||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6205 cttttcaaaaaaataatacagctgagttcagagttgttccaatatcaagacaaagcattccataatccatactatcagttaagtttgcattgtatgctac 6106  T
Q  619 ctaaggctatcatgtgttctaaatga 644  Q
    |||||||||||  |||||||||||||    
T  6105 ctaaggctatcccgtgttctaaatga 6080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #3
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 419 - 644
Target Start/End: Complemental strand, 10520 - 10295
Alignment:
Q  419 catcaaacacaatgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatacacttttggttcatgcctaaagtttatatgtagaat 518  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  10520 catcaaacacaatgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaat 10421  T
Q  519 cttttcnnnnnnntaatacagttgagtttagatttgttccaatatcaagacaaagcattccataatccatactatcagtttagtttgcattgtatgctac 618  Q
    ||||||       |||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10420 cttttcaaaaaaataatacagctgagttcagagttgttccaatatcaagacaaagcattccataatccatactatcagttaagtttgcattgtatgctac 10321  T
Q  619 ctaaggctatcatgtgttctaaatga 644  Q
    |||||||||||  |||||||||||||    
T  10320 ctaaggctatcccgtgttctaaatga 10295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #4
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 419 - 644
Target Start/End: Complemental strand, 14735 - 14510
Alignment:
Q  419 catcaaacacaatgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatacacttttggttcatgcctaaagtttatatgtagaat 518  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  14735 catcaaacacaatgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaat 14636  T
Q  519 cttttcnnnnnnntaatacagttgagtttagatttgttccaatatcaagacaaagcattccataatccatactatcagtttagtttgcattgtatgctac 618  Q
    ||||||       |||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14635 cttttcaaaaaaataatacagctgagttcagagttgttccaatatcaagacaaagcattccataatccatactatcagttaagtttgcattgtatgctac 14536  T
Q  619 ctaaggctatcatgtgttctaaatga 644  Q
    |||||||||||  |||||||||||||    
T  14535 ctaaggctatcccgtgttctaaatga 14510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #5
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 419 - 644
Target Start/End: Complemental strand, 18950 - 18725
Alignment:
Q  419 catcaaacacaatgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatacacttttggttcatgcctaaagtttatatgtagaat 518  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  18950 catcaaacacaatgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaat 18851  T
Q  519 cttttcnnnnnnntaatacagttgagtttagatttgttccaatatcaagacaaagcattccataatccatactatcagtttagtttgcattgtatgctac 618  Q
    ||||||       |||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18850 cttttcaaaaaaataatacagctgagttcagagttgttccaatatcaagacaaagcattccataatccatactatcagttaagtttgcattgtatgctac 18751  T
Q  619 ctaaggctatcatgtgttctaaatga 644  Q
    |||||||||||  |||||||||||||    
T  18750 ctaaggctatcccgtgttctaaatga 18725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #6
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 419 - 644
Target Start/End: Complemental strand, 23165 - 22940
Alignment:
Q  419 catcaaacacaatgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatacacttttggttcatgcctaaagtttatatgtagaat 518  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  23165 catcaaacacaatgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaat 23066  T
Q  519 cttttcnnnnnnntaatacagttgagtttagatttgttccaatatcaagacaaagcattccataatccatactatcagtttagtttgcattgtatgctac 618  Q
    ||||||       |||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23065 cttttcaaaaaaataatacagctgagttcagagttgttccaatatcaagacaaagcattccataatccatactatcagttaagtttgcattgtatgctac 22966  T
Q  619 ctaaggctatcatgtgttctaaatga 644  Q
    |||||||||||  |||||||||||||    
T  22965 ctaaggctatcccgtgttctaaatga 22940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #7
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 419 - 644
Target Start/End: Complemental strand, 27380 - 27155
Alignment:
Q  419 catcaaacacaatgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatacacttttggttcatgcctaaagtttatatgtagaat 518  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  27380 catcaaacacaatgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaat 27281  T
Q  519 cttttcnnnnnnntaatacagttgagtttagatttgttccaatatcaagacaaagcattccataatccatactatcagtttagtttgcattgtatgctac 618  Q
    ||||||       |||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27280 cttttcaaaaaaataatacagctgagttcagagttgttccaatatcaagacaaagcattccataatccatactatcagttaagtttgcattgtatgctac 27181  T
Q  619 ctaaggctatcatgtgttctaaatga 644  Q
    |||||||||||  |||||||||||||    
T  27180 ctaaggctatcccgtgttctaaatga 27155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 173; Significance: 1e-92; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 419 - 644
Target Start/End: Complemental strand, 9204007 - 9203782
Alignment:
Q  419 catcaaacacaatgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatacacttttggttcatgcctaaagtttatatgtagaat 518  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  9204007 catcaaacacaatgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaat 9203908  T
Q  519 cttttcnnnnnnntaatacagttgagtttagatttgttccaatatcaagacaaagcattccataatccatactatcagtttagtttgcattgtatgctac 618  Q
    ||||||       |||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9203907 cttttcaaaaaaataatacagctgagttcagagttgttccaatatcaagacaaagcattccataatccatactatcagttaagtttgcattgtatgctac 9203808  T
Q  619 ctaaggctatcatgtgttctaaatga 644  Q
    |||||||||||  |||||||||||||    
T  9203807 ctaaggctatcccgtgttctaaatga 9203782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 419 - 644
Target Start/End: Complemental strand, 9208226 - 9208001
Alignment:
Q  419 catcaaacacaatgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatacacttttggttcatgcctaaagtttatatgtagaat 518  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  9208226 catcaaacacaatgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatatagttttggttcatgcctaaagtttatatgtagaat 9208127  T
Q  519 cttttcnnnnnnntaatacagttgagtttagatttgttccaatatcaagacaaagcattccataatccatactatcagtttagtttgcattgtatgctac 618  Q
    ||||||       |||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9208126 cttttcaaaaaaataatacagctgagttcagagttgttccaatatcaagacaaagcattccataatccatactatcagttaagtttgcattgtatgctac 9208027  T
Q  619 ctaaggctatcatgtgttctaaatga 644  Q
    |||||||||||  |||||||||||||    
T  9208026 ctaaggctatcccgtgttctaaatga 9208001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 173 - 325
Target Start/End: Complemental strand, 35902828 - 35902676
Alignment:
Q  173 tcctcaccaatcatgatctttaaatttgtcatagaagcaaaagaacaatttaaaaaatataaaggatcattaagacgaaactgaatataaaatgagacta 272  Q
    ||||||| | |||||||| |||||||||||||| |||  |||||||||||| ||||| |||||||||||||| ||| ||| |||||| ||||||||||||    
T  35902828 tcctcacaactcatgatccttaaatttgtcataaaagtgaaagaacaatttgaaaaaaataaaggatcattaggactaaa-tgaataaaaaatgagacta 35902730  T
Q  273 ta-tatgaccaaactgaaactaaaaattagataaagaatctaattaaaactaaa 325  Q
    || |||||||||||||||  ||||| | |||||||||| |||| ||||||||||    
T  35902729 tattatgaccaaactgaatttaaaagtaagataaagaacctaactaaaactaaa 35902676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 134 - 325
Target Start/End: Complemental strand, 23892653 - 23892461
Alignment:
Q  134 cctcacatgttaagcaatgttttccttctgaaatttcagtcctcaccaatcatgatctttaaatttgtcatagaagcaaaagaacaatttaaaaaatata 233  Q
    |||| |||||| | |||||||| |||| |||||||  | ||||| | | |||||||| ||||||||||||||||||| |||||||||||| ||||| |||    
T  23892653 cctctcatgttcaacaatgtttaccttttgaaattgtaatcctcgcaactcatgatccttaaatttgtcatagaagcgaaagaacaatttgaaaaaaata 23892554  T
Q  234 aaggatcattaagacgaaactgaatataaaatgagactata-tatgaccaaactgaaactaaaaattagataaagaatctaattaaaactaaa 325  Q
    |||| |||||| ||| ||| ||||||||||||||||| ||| ||||| ||||||| |  ||||||| ||||||| || | || ||||||||||    
T  23892553 aagggtcattaggactaaattgaatataaaatgagacaatattatgagcaaactggatttaaaaataagataaataaccaaactaaaactaaa 23892461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 405 - 524
Target Start/End: Original strand, 37617280 - 37617399
Alignment:
Q  405 agacacattctcaacatcaaacacaatgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatacacttttggttcatgcctaaag 504  Q
    ||||||||||||||||| ||| |  |||||||| | |||| |||||| |||| |||| |||||| ||||||  || |||| |||||||||||||||||||    
T  37617280 agacacattctcaacataaaatatcatgctaaatagctttttgagttataggctgctttaagatccaaatgtgtcgtacatttttggttcatgcctaaag 37617379  T
Q  505 tttatatgtagaatcttttc 524  Q
    ||| |||| |||||| ||||    
T  37617380 tttttatgaagaatcctttc 37617399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 565
Target Start/End: Original strand, 14863498 - 14863528
Alignment:
Q  535 tacagttgagtttagatttgttccaatatca 565  Q
    |||||||||||||||||||||||||||||||    
T  14863498 tacagttgagtttagatttgttccaatatca 14863528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 405 - 524
Target Start/End: Complemental strand, 22082695 - 22082576
Alignment:
Q  405 agacacattctcaacatcaaacacaatgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatacacttttggttcatgcctaaag 504  Q
    ||||||||||||||||| ||| |  |||||||| | |||| |||||| ||||||| | |||||| ||||||  || |||| |||||||||||||||||||    
T  22082695 agacacattctcaacataaaatatcatgctaaatagctttttgagttataggttgttttaagatccaaatgtgtcgtacatttttggttcatgcctaaag 22082596  T
Q  505 tttatatgtagaatcttttc 524  Q
    ||| |||| |||||| ||||    
T  22082595 tttttatgaagaatcctttc 22082576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 405 - 524
Target Start/End: Complemental strand, 40164805 - 40164687
Alignment:
Q  405 agacacattctcaacatcaaacacaatgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatacacttttggttcatgcctaaag 504  Q
    ||||||||| ||||||| ||| |  |||||||| |||||| |||||| ||||||||| |||||| ||||||  || |||| |||| ||||| ||||||||    
T  40164805 agacacattatcaacataaaatatcatgctaaataactttttgagttataggttgctttaagatccaaatgtgtcgtacatttttagttcaagcctaaag 40164706  T
Q  505 tttatatgtagaatcttttc 524  Q
    ||| |||| |||||| ||||    
T  40164705 ttt-tatgaagaatcctttc 40164687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 405 - 519
Target Start/End: Complemental strand, 6921646 - 6921531
Alignment:
Q  405 agacacattctcaacatcaaacacaatgctaaacaa-ctttgtgagttgtaggttgctataagattcaaatgcatcatacacttttggttcatgcctaaa 503  Q
    ||||||||||||||||| ||| |  |||||||| || | || || ||| ||||||||| |||||| ||||||  ||||||| ||||||||||||||||||    
T  6921646 agacacattctcaacataaaatatcatgctaaataaaccttttgggttataggttgctttaagatccaaatgtgtcatacatttttggttcatgcctaaa 6921547  T
Q  504 gtttatatgtagaatc 519  Q
    | || |||| ||||||    
T  6921546 gattttatgaagaatc 6921531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 405 - 519
Target Start/End: Original strand, 38238232 - 38238347
Alignment:
Q  405 agacacattctcaacatcaaacacaatgctaaacaa-ctttgtgagttgtaggttgctataagattcaaatgcatcatacacttttggttcatgcctaaa 503  Q
    ||||||||||||||||| ||| |  |||||||| || | || || ||| ||||||||| |||||| ||||||  ||||||| ||||||||||||||||||    
T  38238232 agacacattctcaacataaaatatcatgctaaataaaccttttgggttataggttgctttaagatccaaatgtgtcatacatttttggttcatgcctaaa 38238331  T
Q  504 gtttatatgtagaatc 519  Q
    | || |||| ||||||    
T  38238332 gattttatgaagaatc 38238347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 409 - 524
Target Start/End: Original strand, 45456467 - 45456583
Alignment:
Q  409 acattctcaacatcaaacacaatgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatca-tacacttttggttcatgcctaaagttt 507  Q
    ||||||||||||| ||| |  |||||||| ||| || || ||| ||||||||| |||||| ||||||  ||| |||| ||||||||||||||||||| ||    
T  45456467 acattctcaacataaaatatcatgctaaataaccttttgggttataggttgctttaagatccaaatgtgtcaatacatttttggttcatgcctaaagatt 45456566  T
Q  508 atatgtagaatcttttc 524  Q
     |||| |||||| ||||    
T  45456567 ttatgaagaatcctttc 45456583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 454 - 524
Target Start/End: Complemental strand, 19767617 - 19767547
Alignment:
Q  454 aggttgctataagattcaaatgcatcatacacttttggttcatgcctaaagtttatatgtagaatcttttc 524  Q
    |||||||| |||||| ||||||  || |||| |||| ||||||||||||||||| |||| |||||| ||||    
T  19767617 aggttgctttaagatccaaatgtgtcgtacattttttgttcatgcctaaagtttttatgaagaatcctttc 19767547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 524
Target Start/End: Original strand, 7827716 - 7827835
Alignment:
Q  405 agacacattctcaacatcaaacacaatgctaaacaactttgtgagttgtaggttgctataagattcaaatgcatcatacacttttggttcatgcctaaag 504  Q
    ||||||||||||| ||| ||| | ||||||||| |||||| ||||||    |||||  |||||||||||||  | ||||| |||||||| | ||||||||    
T  7827716 agacacattctcagcataaaagataatgctaaataactttttgagttacttgttgcattaagattcaaatgtgtaatacatttttggttaaggcctaaag 7827815  T
Q  505 tttatatgtagaatcttttc 524  Q
    || ||||  |||||| ||||    
T  7827816 ttgatataaagaatcctttc 7827835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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