View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2663_high_11 (Length: 366)
Name: NF2663_high_11
Description: NF2663
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2663_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 238; Significance: 1e-131; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 18 - 356
Target Start/End: Original strand, 3670511 - 3670871
Alignment:
| Q |
18 |
cttcctagatgttcatattatt-atttaaatattactactatatactaagaaagaatatgattaattactatgagctgtaaattaagaaatttctcgtgc |
116 |
Q |
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| T |
3670511 |
cttcctagatgttcatattatttattttaatattactactatatactaataaagaatatgattaattactatgagctgtaaattaagaaatttctcgtgc |
3670610 |
T |
|
| Q |
117 |
tggccatattctatattatttgtactttatgctaagggaatgtact------actatgcattatttgatgtaaaatgtgtgcttcaacttcaagtaaaga |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3670611 |
tggccatattctatattatttgtactttatgctaagggaatgtactaataacaatatgcattatttgatgtaaaatgtgtgcttcaacttcaagtaaaga |
3670710 |
T |
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| Q |
211 |
tttggattaattataaatggaccataaaaactttacacacacttgaactg----------------gagggggaattaaaaatcgtagtcatatgtactt |
294 |
Q |
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||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||| |
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| T |
3670711 |
tttggattaattataaatggaccattaaaactttaggcacacatgaactggacggggatgtgggaagagggggaattaaaaatcgtagtcatatgtactt |
3670810 |
T |
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| Q |
295 |
ttcacttcccaatcatgcttcaaaatcaaaagatctaacacactttttgctctttttctgtg |
356 |
Q |
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||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
3670811 |
ttcactt-ccaatcatgcttcaaaatcaaaagatctaccacactttttgctctttttctgtg |
3670871 |
T |
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