View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2663_low_13 (Length: 373)
Name: NF2663_low_13
Description: NF2663
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2663_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 14 - 354
Target Start/End: Original strand, 33840954 - 33841286
Alignment:
| Q |
14 |
gaaataccatatatcattttatatctattgattggtctatagtttcatcttttccctccactctatcaagattttgagtgtataacatatactcatattt |
113 |
Q |
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| T |
33840954 |
gaaataccatatatcattttatatctattgattggtctatagtttcatcttttccctccactctatcaagattttgagtgtataacatatactcatattt |
33841053 |
T |
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| Q |
114 |
tgatttgatacgagtttaatgtatattgacttcttactttaaatcaagcaatgtttatgagattaaaagaaatcatattgtacctaaaatttcaatttta |
213 |
Q |
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| T |
33841054 |
tgatttgatacgagtttaatgtatattgacttcttactttaaatcaagcaatgtttatgagattaaaagaaatcatattgtacctaaaatttcaatttta |
33841153 |
T |
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| Q |
214 |
tttataaatttcaggtacacgtaatattttaatattttaaccagtatccatgatgtttccattcaaaatatactgtacggagtttatgaaaattgaaatt |
313 |
Q |
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| T |
33841154 |
tttataaatttcaggtacacgtaatattttaatattttaaccagtattcataatgtttccattccaaata-----tacggagtttattta---tgaaatt |
33841245 |
T |
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| Q |
314 |
ggattgatccagaattttcacatattcgccatgcaatcaga |
354 |
Q |
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| T |
33841246 |
ggattgatccagaattttcacatattcgccatgcaatcaga |
33841286 |
T |
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