View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2664-Insertion-7 (Length: 250)
Name: NF2664-Insertion-7
Description: NF2664
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2664-Insertion-7 |
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Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 8 - 248
Target Start/End: Complemental strand, 35756679 - 35756439
Alignment:
| Q |
8 |
aaggttacatgaaaaatcacgctaatcactatcctttcatttacttattaataatattatggattgtgtgattactatgatttattgtataggcatatca |
107 |
Q |
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| T |
35756679 |
aaggttacatgaaaaatcacgctaatcactatcctttcatttacttattaataatattatggattgtgtgattactatgatttattgtataggcatatca |
35756580 |
T |
|
| Q |
108 |
tatcatgtaaatacggataatatctcctatgtttattttgtgcaattattgttttgagcttatataacatcgaatcccatgtctggtttaaacacacggt |
207 |
Q |
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| T |
35756579 |
tatcatgtaaatacggacaatatcgcctatgtttattttgtgcaattattgttttgagcttatataacatcgaatccgatgtctggtttaaacacacggt |
35756480 |
T |
|
| Q |
208 |
ttcatcatatgtctcagtttcctctatttcaacaaagttgg |
248 |
Q |
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| T |
35756479 |
ttcatcatatgtctcagtttcctctatttcaacaatgttgg |
35756439 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 117
Target Start/End: Original strand, 49931912 - 49931942
Alignment:
| Q |
87 |
atttattgtataggcatatcatatcatgtaa |
117 |
Q |
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| T |
49931912 |
atttattgtataggcatatcatatcatgtaa |
49931942 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 126
Target Start/End: Original strand, 45685367 - 45685404
Alignment:
| Q |
89 |
ttattgtataggcatatcatatcatgtaaatacggata |
126 |
Q |
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| T |
45685367 |
ttattgtataggcatatcatatcaagtaaatagggata |
45685404 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 120
Target Start/End: Original strand, 43819037 - 43819070
Alignment:
| Q |
87 |
atttattgtataggcatatcatatcatgtaaata |
120 |
Q |
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||||| |||||||||||||||||||||||||||| |
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|
| T |
43819037 |
atttaatgtataggcatatcatatcatgtaaata |
43819070 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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