View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2664_high_6 (Length: 419)

Name: NF2664_high_6
Description: NF2664
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2664_high_6
NF2664_high_6
[»] chr4 (16 HSPs)
chr4 (79-403)||(3816415-3816744)
chr4 (79-377)||(3808839-3809137)
chr4 (99-339)||(3956520-3956760)
chr4 (86-262)||(4024013-4024189)
chr4 (94-344)||(4001127-4001377)
chr4 (94-344)||(3933996-3934252)
chr4 (94-262)||(3985821-3985989)
chr4 (94-262)||(4217452-4217620)
chr4 (155-344)||(3800482-3800671)
chr4 (94-260)||(3920865-3921031)
chr4 (85-202)||(4008825-4008942)
chr4 (302-344)||(3920775-3920817)
chr4 (280-344)||(4009029-4009093)
chr4 (104-168)||(4017510-4017574)
chr4 (102-168)||(3964730-3964796)
chr4 (280-339)||(4217647-4217706)
[»] chr5 (1 HSPs)
chr5 (99-380)||(13396800-13397087)
[»] chr6 (4 HSPs)
chr6 (35-79)||(27682682-27682726)
chr6 (37-79)||(27690003-27690045)
chr6 (37-79)||(30230240-30230282)
chr6 (35-79)||(13143892-13143937)
[»] chr2 (2 HSPs)
chr2 (35-79)||(31712534-31712578)
chr2 (35-79)||(39156533-39156577)


Alignment Details
Target: chr4 (Bit Score: 239; Significance: 1e-132; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 79 - 403
Target Start/End: Original strand, 3816415 - 3816744
Alignment:
Q  79 taatttggaagataaatatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaa 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||| || ||||||     
T  3816415 taatttggaagataaatatccaattacctgcactccacaccaaagcttttccactagactatctgacaagtccaatataacaagattctttgcagaaaac 3816514  T
Q  179 ttctctgggaatgattttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaaga--caatc-aaaacctt 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |   |||| ||||||||    
T  3816515 ttctctgggaatgattttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaaaaacaaatcaaaaacctt 3816614  T
Q  276 ccataccaagaaaatac-aaaaaccgcaggttggtcatcttatc-aaatacatgacggcttaactttagctccctcattgttggcaaacttatgcttcta 373  Q
    | ||||||  ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3816615 ctataccaccaaaatacaaaaaaccgcaggttggtcatcttatcaaaatacatgacggcttaacttcagctccctcattgttggcaaacttatgcttcta 3816714  T
Q  374 atagcattggtaacctgcagtcatgaaagt 403  Q
    |||||||||||| |||||| ||||||||||    
T  3816715 atagcattggtaccctgcaatcatgaaagt 3816744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 79 - 377
Target Start/End: Original strand, 3808839 - 3809137
Alignment:
Q  79 taatttggaagataaatatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaa 178  Q
    |||||||||||| |  |||||||||||||||||||||| |||||||||||| | |  |||||   |||||| |||||||||||||||||||| ||||||     
T  3808839 taatttggaagacacgtatccaattacctgcactccacgccaaagcttttccattttactatcatacaagttcaatataacaagattctctgcagaaaag 3808938  T
Q  179 ttctctgggaatgattttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaagacaatcaaaaccttcca 278  Q
    ||||||||||||||||||||||| || ||  |||||||||||||| ||| |  |  |||||||||||||| || ||||||||||||||  ||||  || |    
T  3808939 ttctctgggaatgattttagaggacaatacatccaatgaagatatcttagattagttggaaaagattgaaacctttgaggaagacaattgaaactatcta 3809038  T
Q  279 taccaagaaaatacaaaaaccgcaggttggtcatcttatcaaatacatgacggcttaactttagctccctcattgttggcaaacttatgcttctaatag 377  Q
    || ||  |||||||||||| || || ||||||||||||||||||||| || |||||||||  |||| |||||||||| ||| |||||||||||| ||||    
T  3809039 tatcaccaaaatacaaaaatcgaagtttggtcatcttatcaaatacacgagggcttaactcgagcttcctcattgttcgcagacttatgcttcttatag 3809137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 99 - 339
Target Start/End: Complemental strand, 3956760 - 3956520
Alignment:
Q  99 caattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctctgggaatgattttag 198  Q
    |||||| |||||||||||||||||| ||||| | ||| |||  ||||| ||||||||||||||||||||||| |||||| ||||||| || |||||||||    
T  3956760 caattatctgcactccacaccaaagtttttccagtaggctacctgacaggtccaatataacaagattctctgcagaaaacttctctgagagtgattttag 3956661  T
Q  199 agggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaagacaatcaaaaccttccataccaagaaaatacaaaaac 298  Q
    |||| |  || |||||||||||||||||| | ||  |||||||||||||| ||||| ||||| || ||| ||||| || ||  || |||||| |||||||    
T  3956660 agggtaacatatccaatgaagatattttagatcagttggaaaagattgaatcccttcaggaatacgatccaaaccatctatgtcacgaaaatccaaaaac 3956561  T
Q  299 cgcaggttggtcatcttatcaaatacatgacggcttaactt 339  Q
     |||||||||||||||||||||||||||   ||||||||||    
T  3956560 tgcaggttggtcatcttatcaaatacattggggcttaactt 3956520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 86 - 262
Target Start/End: Original strand, 4024013 - 4024189
Alignment:
Q  86 gaagataaatatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctctg 185  Q
    ||||| |||||| || |||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||| || |||||| |||||||    
T  4024013 gaagagaaatattcacttacctgcactccacaccaaagcttttccactagactatctgacaagtccaatataacaagattctttgcagaaaacttctctg 4024112  T
Q  186 ggaatgattttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaaga 262  Q
    ||||||||||||||||| | |   |||||  ||||||| ||| | ||  ||||||||||||||||||||||||||||    
T  4024113 ggaatgattttagagggtaattcatccaagaaagatatcttagatcagttggaaaagattgaagcccttgaggaaga 4024189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 94 - 344
Target Start/End: Original strand, 4001127 - 4001377
Alignment:
Q  94 atatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctctgggaatgat 193  Q
    |||| ||||||||||||||||||||||||| ||||| | | |||||| ||| |||||||||||||||||||||| |  |||||| |||| ||||||||||    
T  4001127 atattcaattacctgcactccacaccaaagattttccactcgactatgtgaaaagtccaatataacaagattctttccagaaaacttctttgggaatgat 4001226  T
Q  194 tttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaagacaatcaaaaccttccataccaagaaaataca 293  Q
    ||||||||| | | | |||||  || |||| ||| | ||  ||| ||||||||||||||||||||||||   || ||| | |   ||||||  |||| ||    
T  4001227 tttagagggtaatgtatccaacaaatatatcttagatcagttgggaaagattgaagcccttgaggaagaagttccaaatcgtatttaccaatgaaatcca 4001326  T
Q  294 aaaaccgcaggttggtcatcttatcaaatacatgacggcttaactttagct 344  Q
    || | |||||||||||||||||| ||||||||||| |||||||||| ||||    
T  4001327 aatatcgcaggttggtcatcttagcaaatacatgagggcttaacttcagct 4001377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 94 - 344
Target Start/End: Complemental strand, 3934252 - 3933996
Alignment:
Q  94 atatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctctgggaatgat 193  Q
    |||| |||||||||| ||||||||||| |||||||| | | |||||    ||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  3934252 atattcaattacctgtactccacaccatagcttttccattcgactaagatacaagtccaatataacaagattctctgcagaaaacttctctgggaatgat 3934153  T
Q  194 tttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaagacaatcaaaa---ccttccataccaa---gaa 287  Q
    ||||||||| |  ||  ||||||||||||| | | ||||  ||||||||||| |||||||||||||| |  ||| |||    | || | | |||    ||    
T  3934152 tttagagggtaacatacccaatgaagatatctaagaccagttggaaaagattcaagcccttgaggaaaaagatccaaatagtcatcaaaatcaacccaaa 3934053  T
Q  288 aatacaaaaaccgcaggttggtcatcttatcaaatacatgacggcttaactttagct 344  Q
    ||| ||||||  | ||||||||||||||||||||||||||| |||||||||||||||    
T  3934052 aattcaaaaattggaggttggtcatcttatcaaatacatgagggcttaactttagct 3933996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 94 - 262
Target Start/End: Original strand, 3985821 - 3985989
Alignment:
Q  94 atatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctctgggaatgat 193  Q
    |||| |||||||||| |||||||||||||||||||| | ||| ||||| |||||||||||||||||||| ||||||| |||||| |||| ||| |||||     
T  3985821 atattcaattacctgtactccacaccaaagcttttctactaggctatacgacaagtccaatataacaagtttctctgcagaaaacttctttggcaatgac 3985920  T
Q  194 tttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaaga 262  Q
    | ||||||| | | |  ||||||||||||| ||| | ||  |||||||| |||||||||||||||||||    
T  3985921 tctagagggtaatgtacccaatgaagatatcttagatcagttggaaaaggttgaagcccttgaggaaga 3985989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 94 - 262
Target Start/End: Original strand, 4217452 - 4217620
Alignment:
Q  94 atatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctctgggaatgat 193  Q
    |||| |||||||||| |||||||||||||||||||| | |  ||||||   ||||| |||||||||||||||||||| |||||| |||||||||||||||    
T  4217452 atattcaattacctgtactccacaccaaagcttttccactttactataacgcaagttcaatataacaagattctctgcagaaaagttctctgggaatgat 4217551  T
Q  194 tttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaaga 262  Q
    ||||||||| |  ||  |||| |||||||| ||| | ||  ||||||||||||||||||| ||||||||    
T  4217552 tttagagggtaacatacccaacgaagatatcttagatcatttggaaaagattgaagccctcgaggaaga 4217620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 155 - 344
Target Start/End: Original strand, 3800482 - 3800671
Alignment:
Q  155 ataacaagattctctgaagaaaaattctctgggaatgattttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagccctt 254  Q
    ||||||||||||| || |||||| |||||||||||||||||||||||| | |   |||||||||||||| ||| | ||  ||||||||||||||||||||    
T  3800482 ataacaagattctttgcagaaaacttctctgggaatgattttagagggtaatgcatccaatgaagatatcttagatcatttggaaaagattgaagccctt 3800581  T
Q  255 gaggaagacaatcaaaaccttccataccaagaaaatacaaaaaccgcaggttggtcatcttatcaaatacatgacggcttaactttagct 344  Q
    ||||||||   || ||| | |   ||||| |||||| |||| | |||| ||||||||||||| ||||||||||| |||||||||| ||||    
T  3800582 gaggaagaagttccaaatcgtatttaccatgaaaatccaaatatcgcaagttggtcatcttagcaaatacatgagggcttaacttcagct 3800671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 94 - 260
Target Start/End: Complemental strand, 3921031 - 3920865
Alignment:
Q  94 atatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctctgggaatgat 193  Q
    |||| |||||||||| ||||||||||| |||||||| | | ||| |    ||||||||||||||||||||||||| | | |||| ||||||| |||||||    
T  3921031 atattcaattacctgtactccacaccatagcttttccattcgaccaagatacaagtccaatataacaagattctcagcaaaaaacttctctgagaatgat 3920932  T
Q  194 tttagagggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaa 260  Q
    ||||||||| | | | |||||||||||||| ||| ||||  ||||||||||| ||||||||||||||    
T  3920931 tttagagggtaatctatccaatgaagatatcttaaaccagttggaaaagattcaagcccttgaggaa 3920865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 85 - 202
Target Start/End: Original strand, 4008825 - 4008942
Alignment:
Q  85 ggaagataaatatccaattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctct 184  Q
    |||||||| |||  ||||||||| ||||||| ||||||||||||| | | | ||| |||||||||| ||||||||||||||||| | |||||| |||| |    
T  4008825 ggaagatacatagtcaattaccttcactccataccaaagcttttctacttggctaaatgacaagtcaaatataacaagattctccgcagaaaacttcttt 4008924  T
Q  185 gggaatgattttagaggg 202  Q
    || |||||||||||||||    
T  4008925 ggcaatgattttagaggg 4008942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 344
Target Start/End: Complemental strand, 3920817 - 3920775
Alignment:
Q  302 aggttggtcatcttatcaaatacatgacggcttaactttagct 344  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  3920817 aggttggtcatcttatcaaatacatgagggcttaactttagct 3920775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 4009029 - 4009093
Alignment:
Q  280 accaagaaaatacaaaaaccgcaggttggtcatcttatcaaatacatgacggcttaactttagct 344  Q
    |||| |||||| ||||||  ||||||||||||||||| ||||||||||| |||||||||| ||||    
T  4009029 accatgaaaatccaaaaatagcaggttggtcatcttagcaaatacatgagggcttaacttcagct 4009093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 4017510 - 4017574
Alignment:
Q  104 acctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctc 168  Q
    ||||||||||||  ||| |||||||||| | ||||||||||||||||||||||||| || |||||    
T  4017510 acctgcactccatgccagagcttttcaactcgactatatgacaagtccaatataacgagtttctc 4017574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 168
Target Start/End: Complemental strand, 3964796 - 3964730
Alignment:
Q  102 ttacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctc 168  Q
    ||||||||||||||  ||| || ||||||| | ||||||||||||||||||||||||| || |||||    
T  3964796 ttacctgcactccatgccagagtttttcaactcgactatatgacaagtccaatataacgagtttctc 3964730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 280 - 339
Target Start/End: Original strand, 4217647 - 4217706
Alignment:
Q  280 accaagaaaatacaaaaaccgcaggttggtcatcttatcaaatacatgacggcttaactt 339  Q
    ||||| ||||| ||||||   |||||||||||||||| ||||||||||| ||||||||||    
T  4217647 accaaaaaaattcaaaaatttcaggttggtcatcttagcaaatacatgagggcttaactt 4217706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 99 - 380
Target Start/End: Original strand, 13396800 - 13397087
Alignment:
Q  99 caattacctgcactccacaccaaagcttttcaaatagactatatgacaagtccaatataacaagattctctgaagaaaaattctctgggaatgattttag 198  Q
    |||||||||| |||||||||||||||||||| |  || ||||||| |||| ||| |||||||||||| ||   |||||| ||||||||||||||||||||    
T  13396800 caattacctgtactccacaccaaagcttttctacaaggctatatggcaagcccagtataacaagattatcaacagaaaacttctctgggaatgattttag 13396899  T
Q  199 agggcagtatgtccaatgaagatattttataccaagtggaaaagattgaagcccttgaggaagacaatcaaaaccttccataccaagaaaatacaaaaac 298  Q
    |||| | |   |||||| ||||||| ||| | ||  ||||||| ||||||||||||||||||||| ||| ||||| || ||| || |||||||||||||     
T  13396900 agggtaatgcatccaataaagatatcttagatcagttggaaaaaattgaagcccttgaggaagacgatccaaaccgtctatatcatgaaaatacaaaaat 13396999  T
Q  299 cgcaggttggtcatcttatcaaatacatgacggcttaactttagctccctcattgttggcaa------acttatgcttctaatagcat 380  Q
      ||||||||||||||||||||||||| |  |||||||||| |||| ||| |||| || |||      ||||||||||||||||||||    
T  13397000 ttcaggttggtcatcttatcaaatacaggcgggcttaacttcagcttcctaattgctgacaagtctacacttatgcttctaatagcat 13397087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 27682726 - 27682682
Alignment:
Q  35 cagagagagctacgggaggaagagaaagaatgagggaagtgttat 79  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  27682726 cagagagagctacgggaggaaaagaaagaatgagggaagtgttat 27682682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 37 - 79
Target Start/End: Complemental strand, 27690045 - 27690003
Alignment:
Q  37 gagagagctacgggaggaagagaaagaatgagggaagtgttat 79  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  27690045 gagagagctacgggaggaaaagaaagaatgagggaagtgttat 27690003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 37 - 79
Target Start/End: Original strand, 30230240 - 30230282
Alignment:
Q  37 gagagagctacgggaggaagagaaagaatgagggaagtgttat 79  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  30230240 gagagagctacgggaggaaaagaaagaatgagggaagtgttat 30230282  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 13143892 - 13143937
Alignment:
Q  35 cagagagagctacgggaggaagagaaag-aatgagggaagtgttat 79  Q
    ||||||||||||||||||||| |||||| ||||||| |||||||||    
T  13143892 cagagagagctacgggaggaaaagaaagaaatgaggaaagtgttat 13143937  T

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Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 31712578 - 31712534
Alignment:
Q  35 cagagagagctacgggaggaagagaaagaatgagggaagtgttat 79  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  31712578 cagagagagctacgggaggaaaagaaagaatgagggaagtgttat 31712534  T

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Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 39156533 - 39156577
Alignment:
Q  35 cagagagagctacgggaggaagagaaagaatgagggaagtgttat 79  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  39156533 cagagagagctacgggaggaaaagaaagaatgagggaagtgttat 39156577  T

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