View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2666_low_7 (Length: 318)

Name: NF2666_low_7
Description: NF2666
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2666_low_7
NF2666_low_7
[»] chr6 (21 HSPs)
chr6 (196-237)||(8603504-8603545)
chr6 (199-237)||(20105679-20105717)
chr6 (199-237)||(25775036-25775074)
chr6 (199-237)||(22737836-22737874)
chr6 (196-237)||(19993601-19993641)
chr6 (196-237)||(22601395-22601436)
chr6 (196-237)||(24545653-24545693)
chr6 (196-237)||(25339288-25339328)
chr6 (196-237)||(25923428-25923468)
chr6 (201-237)||(5672128-5672164)
chr6 (196-236)||(20218507-20218546)
chr6 (196-236)||(22112532-22112571)
chr6 (196-227)||(29360322-29360353)
chr6 (199-237)||(18993203-18993240)
chr6 (199-237)||(26473949-26473987)
chr6 (196-237)||(18233854-18233894)
chr6 (196-237)||(18627434-18627474)
chr6 (196-237)||(25949332-25949372)
chr6 (196-237)||(25963932-25963972)
chr6 (196-237)||(25968579-25968619)
chr6 (201-237)||(18396545-18396580)
[»] chr5 (14 HSPs)
chr5 (196-237)||(34223165-34223206)
chr5 (199-237)||(20245554-20245592)
chr5 (199-237)||(21382284-21382322)
chr5 (199-237)||(23756753-23756791)
chr5 (199-237)||(23822209-23822247)
chr5 (196-237)||(12410533-12410573)
chr5 (196-237)||(31414623-31414663)
chr5 (196-237)||(31758164-31758204)
chr5 (199-237)||(23435322-23435360)
chr5 (199-237)||(23446689-23446727)
chr5 (200-237)||(12322338-12322375)
chr5 (196-237)||(20724894-20724934)
chr5 (196-237)||(22942365-22942405)
chr5 (201-237)||(2953577-2953612)
[»] chr1 (14 HSPs)
chr1 (196-236)||(19880148-19880188)
chr1 (199-237)||(52755396-52755434)
chr1 (199-237)||(19364674-19364712)
chr1 (199-237)||(22411107-22411145)
chr1 (199-237)||(36850409-36850447)
chr1 (199-237)||(41461724-41461762)
chr1 (199-237)||(49379698-49379736)
chr1 (201-237)||(19788335-19788371)
chr1 (199-237)||(8653751-8653789)
chr1 (199-237)||(46143595-46143633)
chr1 (196-237)||(19875190-19875230)
chr1 (196-237)||(20412272-20412312)
chr1 (201-237)||(25726957-25726993)
chr1 (201-237)||(25735365-25735401)
[»] chr8 (12 HSPs)
chr8 (199-237)||(29003631-29003669)
chr8 (196-237)||(22284971-22285012)
chr8 (196-237)||(42418566-42418607)
chr8 (199-237)||(6570591-6570629)
chr8 (199-237)||(17126820-17126858)
chr8 (196-237)||(21139672-21139712)
chr8 (199-236)||(23455580-23455617)
chr8 (199-237)||(22818236-22818274)
chr8 (199-237)||(24034667-24034705)
chr8 (199-237)||(43836331-43836369)
chr8 (196-237)||(26012987-26013027)
chr8 (201-237)||(26854081-26854116)
[»] chr4 (9 HSPs)
chr4 (199-237)||(39788-39826)
chr4 (196-237)||(16953953-16953994)
chr4 (199-237)||(7197220-7197258)
chr4 (199-237)||(8091952-8091990)
chr4 (199-237)||(39043542-39043580)
chr4 (199-236)||(9944937-9944974)
chr4 (196-237)||(12808234-12808275)
chr4 (199-237)||(9857205-9857243)
chr4 (196-237)||(11902658-11902698)
[»] chr3 (16 HSPs)
chr3 (199-237)||(1993450-1993488)
chr3 (199-237)||(1998609-1998647)
chr3 (198-237)||(17480468-17480507)
chr3 (199-237)||(5687680-5687718)
chr3 (199-237)||(14137777-14137815)
chr3 (199-237)||(17388476-17388514)
chr3 (199-237)||(21265133-21265171)
chr3 (196-237)||(11827455-11827495)
chr3 (196-237)||(13418392-13418432)
chr3 (196-237)||(19567048-19567089)
chr3 (199-237)||(2005952-2005990)
chr3 (199-237)||(3212540-3212578)
chr3 (199-237)||(5666536-5666574)
chr3 (196-237)||(7908528-7908568)
chr3 (196-237)||(14348122-14348163)
chr3 (196-237)||(27407216-27407257)
[»] chr7 (15 HSPs)
chr7 (196-237)||(1613976-1614017)
chr7 (196-237)||(39271160-39271201)
chr7 (201-237)||(2325886-2325922)
chr7 (199-237)||(3210781-3210819)
chr7 (199-237)||(4090707-4090745)
chr7 (199-237)||(37100418-37100456)
chr7 (199-237)||(48801297-48801335)
chr7 (196-237)||(16897307-16897347)
chr7 (201-237)||(368115-368151)
chr7 (202-237)||(11997389-11997424)
chr7 (199-237)||(9258684-9258722)
chr7 (199-237)||(9311531-9311569)
chr7 (203-237)||(12199172-12199206)
chr7 (196-237)||(17206438-17206478)
chr7 (201-237)||(11483907-11483942)
[»] chr2 (15 HSPs)
chr2 (200-237)||(24177721-24177758)
chr2 (196-237)||(27745056-27745097)
chr2 (196-237)||(30949308-30949349)
chr2 (199-237)||(20708316-20708354)
chr2 (199-237)||(32139968-32140006)
chr2 (196-237)||(23698849-23698889)
chr2 (196-237)||(29577393-29577434)
chr2 (196-237)||(36684289-36684330)
chr2 (196-237)||(41653650-41653690)
chr2 (199-237)||(25043164-25043202)
chr2 (199-237)||(25370409-25370447)
chr2 (199-237)||(29563190-29563228)
chr2 (196-237)||(20282059-20282099)
chr2 (201-237)||(24321807-24321843)
chr2 (201-237)||(25337198-25337233)
[»] scaffold0059 (1 HSPs)
scaffold0059 (198-237)||(13048-13087)
[»] scaffold0097 (1 HSPs)
scaffold0097 (199-237)||(12390-12428)
[»] scaffold0049 (1 HSPs)
scaffold0049 (199-237)||(14666-14704)
[»] scaffold0014 (2 HSPs)
scaffold0014 (199-237)||(191200-191238)
scaffold0014 (31-82)||(26205-26256)
[»] scaffold0013 (1 HSPs)
scaffold0013 (199-237)||(232311-232349)
[»] scaffold0011 (1 HSPs)
scaffold0011 (196-237)||(172743-172783)
[»] scaffold1092 (1 HSPs)
scaffold1092 (199-237)||(1733-1771)
[»] scaffold0278 (1 HSPs)
scaffold0278 (199-237)||(12594-12632)
[»] scaffold0228 (1 HSPs)
scaffold0228 (199-237)||(19675-19713)
[»] scaffold0773 (1 HSPs)
scaffold0773 (196-229)||(1114-1147)
[»] scaffold0001 (1 HSPs)
scaffold0001 (196-237)||(520755-520795)
[»] scaffold0231 (1 HSPs)
scaffold0231 (201-237)||(21333-21368)


Alignment Details
Target: chr6 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 8603504 - 8603545
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  8603504 acaattcatcttttgttcttggaattcaataagtgacaattg 8603545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 20105717 - 20105679
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20105717 attcatcttttgttcttggaattcaataagtgacaattg 20105679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 25775036 - 25775074
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25775036 attcatcttttgttcttggaattcaataagtgacaattg 25775074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 22737836 - 22737874
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  22737836 attcatcttttattcttggaattcaataagtgacaattg 22737874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 19993601 - 19993641
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  19993601 acaattcatcttttgttcttggaattcaat-agtgacaattg 19993641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 22601436 - 22601395
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||| |||||| ||||||||||||    
T  22601436 acaattcatcttttgttcttgggattcaaaaagtgacaattg 22601395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 24545693 - 24545653
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  24545693 acaattcatcttttgttcttggaattcaat-agtgacaattg 24545653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 25339328 - 25339288
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  25339328 acaattcatcttttgttcttggaattcaat-agtgacaattg 25339288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 25923468 - 25923428
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  25923468 acaattcatcttttgttcttggaattcaat-agtgacaattg 25923428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 5672164 - 5672128
Alignment:
Q  201 tcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||| |||||||||||||||||||||||||||    
T  5672164 tcatcttttattcttggaattcaataagtgacaattg 5672128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 20218546 - 20218507
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaatt 236  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  20218546 acaattcatcttttgttcttggaattcaat-agtgacaatt 20218507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 22112571 - 22112532
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaatt 236  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  22112571 acaattcatcttttgttcttggaattcaat-agtgacaatt 22112532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 227
Target Start/End: Original strand, 29360322 - 29360353
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataa 227  Q
    ||||||||||||||||||||||||||||||||    
T  29360322 acaattcatcttttgttcttggaattcaataa 29360353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 18993203 - 18993240
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  18993203 attcatcttttgttcttggaattcaat-agtgacaattg 18993240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 26473949 - 26473987
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  26473949 attcatcttttatttttggaattcaataagtgacaattg 26473987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 18233894 - 18233854
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  18233894 acaattcatcttttgttcttggaaat-aataagtgacaattg 18233854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 18627434 - 18627474
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||||||||| |||||||||||| |||||||||||    
T  18627434 acaattcatcttttgttattggaattcaat-agtgacaattg 18627474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 25949332 - 25949372
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  25949332 acaattcatcttttgttcttggaaat-aataagtgacaattg 25949372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 25963932 - 25963972
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  25963932 acaattcatcttttgttcttggaaat-aataagtgacaattg 25963972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 25968579 - 25968619
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  25968579 acaattcatcttttgttcttggaaat-aataagtgacaattg 25968619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 18396580 - 18396545
Alignment:
Q  201 tcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||||||||||||||||| |||||||||||    
T  18396580 tcatcttttgttcttggaattcaat-agtgacaattg 18396545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 34223206 - 34223165
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  34223206 acaattcatcttttgttcttggaattcaataagtgacaattg 34223165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 20245554 - 20245592
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  20245554 attcatcttttattcttggaattcaataagtgacaattg 20245592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 21382284 - 21382322
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  21382284 attcatcttttattcttggaattcaataagtgacaattg 21382322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 23756753 - 23756791
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  23756753 attcatcttttattcttggaattcaataagtgacaattg 23756791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 23822209 - 23822247
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  23822209 attcatcttttattcttggaattcaataagtgacaattg 23822247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 12410533 - 12410573
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  12410533 acaattcatcttttgttcttggaattcaataa-tgacaattg 12410573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 31414623 - 31414663
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  31414623 acaattcatcttttgttcttggaattcaat-agtgacaattg 31414663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 31758204 - 31758164
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  31758204 acaattcatcttttgttcttggaattcaat-agtgacaattg 31758164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 23435322 - 23435360
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||| || |||||||||||||||||||||||||||    
T  23435322 attcatctcttattcttggaattcaataagtgacaattg 23435360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 23446689 - 23446727
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||| || |||||||||||||||||||||||||||    
T  23446689 attcatctcttattcttggaattcaataagtgacaattg 23446727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 12322338 - 12322375
Alignment:
Q  200 ttcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  12322338 ttcatcttttattcttagaattcaataagtgacaattg 12322375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 20724934 - 20724894
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||| ||||||||||||||||||||||| |||||||||||    
T  20724934 acaattaatcttttgttcttggaattcaat-agtgacaattg 20724894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 22942365 - 22942405
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  22942365 acaattcatcttttgttcttggaaat-aataagtgacaattg 22942405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 2953612 - 2953577
Alignment:
Q  201 tcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||||||||||||||||| |||||||||||    
T  2953612 tcatcttttgttcttggaattcaat-agtgacaattg 2953577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 19880188 - 19880148
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaatt 236  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  19880188 acaattcatcttttgttcttggaattcaataagtgacaatt 19880148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 52755434 - 52755396
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||||||||||||||||||    
T  52755434 attcatcttttgttcttggaattcaataagtgacaattg 52755396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 19364674 - 19364712
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  19364674 attcatcttttattcttggaattcaataagtgacaattg 19364712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 22411107 - 22411145
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  22411107 attcatcttttgttcttggaattcaataagagacaattg 22411145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 36850447 - 36850409
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  36850447 attcatcttttattcttggaattcaataagtgacaattg 36850409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 41461724 - 41461762
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  41461724 attcatcttttattcttggaattcaataagtgacaattg 41461762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 49379736 - 49379698
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  49379736 attcatcttttattcttggaattcaataagtgacaattg 49379698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 19788371 - 19788335
Alignment:
Q  201 tcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||| |||||||||||||||||||||||||||    
T  19788371 tcatcttttattcttggaattcaataagtgacaattg 19788335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 8653751 - 8653789
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  8653751 attcatcttttattcttggaattcaacaagtgacaattg 8653789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 46143633 - 46143595
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  46143633 attcattttttattcttggaattcaataagtgacaattg 46143595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 19875230 - 19875190
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||| |||| |||||||||||||||||||||||||||    
T  19875230 acaattcatttttt-ttcttggaattcaataagtgacaattg 19875190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 20412272 - 20412312
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  20412272 acaattcatcttttgttcttggaaat-aataagtgacaattg 20412312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 25726957 - 25726993
Alignment:
Q  201 tcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||| |||| |||||||||||||||||||||||||||    
T  25726957 tcattttttattcttggaattcaataagtgacaattg 25726993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 25735365 - 25735401
Alignment:
Q  201 tcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||| |||| |||||||||||||||||||||||||||    
T  25735365 tcattttttattcttggaattcaataagtgacaattg 25735401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 29003631 - 29003669
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29003631 attcatcttttgttcttggaattcaataagtgacaattg 29003669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 22284971 - 22285012
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  22284971 acaattcatcttttattcttggaattcaataagtgacaattg 22285012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 42418607 - 42418566
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  42418607 acaattcatcttttattcttggaattcaataagtgacaattg 42418566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 6570629 - 6570591
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  6570629 attcatcttttattcttggaattcaataagtgacaattg 6570591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 17126820 - 17126858
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  17126820 attcatcttttattcttggaattcaataagtgacaattg 17126858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 21139672 - 21139712
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  21139672 acaattcatcttttgttcttggaattcaat-agtgacaattg 21139712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 23455580 - 23455617
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaatt 236  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  23455580 attcatcttttattcttggaattcaataagtgacaatt 23455617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 22818236 - 22818274
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  22818236 attcattttttattcttggaattcaataagtgacaattg 22818274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 24034667 - 24034705
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  24034667 attcatcttttattctttgaattcaataagtgacaattg 24034705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 43836369 - 43836331
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  43836369 attcatcttttattattggaattcaataagtgacaattg 43836331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 26012987 - 26013027
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  26012987 acaattcatcttttgttcttggaaat-aataagtgacaattg 26013027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 26854081 - 26854116
Alignment:
Q  201 tcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||||||||||||||||| |||||||||||    
T  26854081 tcatcttttgttcttggaattcaat-agtgacaattg 26854116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 39826 - 39788
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39826 attcatcttttgttcttggaattcaataagtgacaattg 39788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 16953994 - 16953953
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  16953994 acaattcatcttttgttattggaattcaataagtgacaattg 16953953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 7197220 - 7197258
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  7197220 attcatcttttattcttggaattcaataagtgacaattg 7197258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 8091990 - 8091952
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  8091990 attcatcttttattcttggaattcaataagtgacaattg 8091952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 39043580 - 39043542
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  39043580 attcatcttttattcttggaattcaataagtgacaattg 39043542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 9944937 - 9944974
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaatt 236  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  9944937 attcatcttttattcttggaattcaataagtgacaatt 9944974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 12808275 - 12808234
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||| ||||||||||||||||||||||||||||||| |||||    
T  12808275 acaaatcatcttttgttcttggaattcaataagtgagaattg 12808234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 9857205 - 9857243
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  9857205 attcatcttttattctcggaattcaataagtgacaattg 9857243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 11902698 - 11902658
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  11902698 acaattcatcttttgttcttggaaat-aataagtgacaattg 11902658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 1993450 - 1993488
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1993450 attcatcttttgttcttggaattcaataagtgacaattg 1993488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 1998609 - 1998647
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1998609 attcatcttttgttcttggaattcaataagtgacaattg 1998647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 237
Target Start/End: Original strand, 17480468 - 17480507
Alignment:
Q  198 aattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  17480468 aattcatcttttattcttggaattcaataagtgacaattg 17480507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 5687680 - 5687718
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  5687680 attcatcttttattcttggaattcaataagtgacaattg 5687718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 14137815 - 14137777
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  14137815 attcatcttttgttcttggaattcaataagtgtcaattg 14137777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 17388476 - 17388514
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  17388476 attcatcttttattcttggaattcaataagtgacaattg 17388514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 21265171 - 21265133
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  21265171 attcatcttttattcttggaattcaataagtgacaattg 21265133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 11827495 - 11827455
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  11827495 acaattcatcttttgttcttggaattcaat-agtgacaattg 11827455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 13418392 - 13418432
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  13418392 acaattcatcttttgttcttggaattcaat-agtgacaattg 13418432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 19567089 - 19567048
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  19567089 acaattcatcttttattcttgaaattcaataagtgacaattg 19567048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 2005952 - 2005990
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  2005952 attcatctttcattcttggaattcaataagtgacaattg 2005990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 3212540 - 3212578
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  3212540 attcatcttttattcttggaattcactaagtgacaattg 3212578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 5666536 - 5666574
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  5666536 attcatattttattcttggaattcaataagtgacaattg 5666574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 7908528 - 7908568
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||| ||||||||||||||||||||||||| |||||||||||    
T  7908528 acaaatcatcttttgttcttggaattcaat-agtgacaattg 7908568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 14348163 - 14348122
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||| ||||||||| |||||| ||||||||||||||||||||    
T  14348163 acaaatcatcttttattcttgaaattcaataagtgacaattg 14348122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 27407216 - 27407257
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||| | ||| |||||||||||||||||    
T  27407216 acaattcatcttttgttcctagaaatcaataagtgacaattg 27407257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 1613976 - 1614017
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  1613976 acaaatcatcttttgttcttggaattcaataagtgacaattg 1614017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 39271160 - 39271201
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  39271160 acaattgatcttttgttcttggaattcaataagtgacaattg 39271201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 2325922 - 2325886
Alignment:
Q  201 tcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||||||||||||||||    
T  2325922 tcatcttttgttcttggaattcaataagtgacaattg 2325886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 3210819 - 3210781
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  3210819 attcatcttttattcttggaattcaataagtgacaattg 3210781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 4090707 - 4090745
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  4090707 attcatctattgttcttggaattcaataagtgacaattg 4090745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 37100456 - 37100418
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  37100456 attcatcttttattcttggaattcaataagtgacaattg 37100418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 48801335 - 48801297
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  48801335 attcatcttttattcttggaattcaataagtgacaattg 48801297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 16897347 - 16897307
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  16897347 acaattcatcttttgttcttggaattcaat-agtgacaattg 16897307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 368115 - 368151
Alignment:
Q  201 tcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||| ||||||||||||||||    
T  368115 tcatcttttgttcttggaatacaataagtgacaattg 368151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 237
Target Start/End: Complemental strand, 11997424 - 11997389
Alignment:
Q  202 catcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||| |||||||||||||||||||||||||||    
T  11997424 catcttttattcttggaattcaataagtgacaattg 11997389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 9258722 - 9258684
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  9258722 attcatcttttatttttggaattcaataagtgacaattg 9258684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 9311531 - 9311569
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  9311531 attcatcttttatttttggaattcaataagtgacaattg 9311569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 12199172 - 12199206
Alignment:
Q  203 atcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||| |||||||||||||||||||||||||||    
T  12199172 atcttttattcttggaattcaataagtgacaattg 12199206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 17206478 - 17206438
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  17206478 acaattcatcttttgttcttggaaat-aataagtgacaattg 17206438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 11483942 - 11483907
Alignment:
Q  201 tcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||||||||||||||||||| |||||||||    
T  11483942 tcatcttttgttcttggaattcaataa-tgacaattg 11483907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 24177758 - 24177721
Alignment:
Q  200 ttcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24177758 ttcatcttttgttcttggaattcaataagtgacaattg 24177721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 27745056 - 27745097
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  27745056 acaattcatcttttattcttggaattcaataagtgacaattg 27745097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 30949349 - 30949308
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  30949349 acaattcatcttttgttcttcgaattcaataagtgacaattg 30949308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 20708354 - 20708316
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  20708354 attcatcttttattcttggaattcaataagtgacaattg 20708316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 32139968 - 32140006
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  32139968 attcatcttttattcttggaattcaataagtgacaattg 32140006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 23698889 - 23698849
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  23698889 acaattcatcttttgttcttggaattcaat-agtgacaattg 23698849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 29577434 - 29577393
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||| |||||||||||||||||||| |||||||||||    
T  29577434 acaattcattttttgttcttggaattcaatcagtgacaattg 29577393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 36684289 - 36684330
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||| ||||||||| |||||||||||||||||||||||||||    
T  36684289 acaaatcatcttttcttcttggaattcaataagtgacaattg 36684330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 41653690 - 41653650
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  41653690 acaattcatcttttgttcttggaattcaat-agtgacaattg 41653650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 25043202 - 25043164
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  25043202 attcatcttttattcttggaatttaataagtgacaattg 25043164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 25370447 - 25370409
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  25370447 attcatcttttattcttgaaattcaataagtgacaattg 25370409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 29563190 - 29563228
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  29563190 attcatctttcattcttggaattcaataagtgacaattg 29563228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 20282059 - 20282099
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  20282059 acaattcatcttttgttcttggaaat-aataagtgacaattg 20282099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 24321807 - 24321843
Alignment:
Q  201 tcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||||||||||| | |||||||||||||||    
T  24321807 tcatcttttgttcttggaaattaataagtgacaattg 24321843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 25337233 - 25337198
Alignment:
Q  201 tcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||||||||||||||||| |||||||||||    
T  25337233 tcatcttttgttcttggaattcaat-agtgacaattg 25337198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 237
Target Start/End: Original strand, 13048 - 13087
Alignment:
Q  198 aattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  13048 aattcatcttttattcttggaattcaataagtgacaattg 13087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 12428 - 12390
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  12428 attcatcttttattcttggaattcaataagtgacaattg 12390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 14704 - 14666
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  14704 attcatcttttattcttggaattcaataagtgacaattg 14666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 191238 - 191200
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  191238 attcatcttttattcttggaattcaataagtgacaattg 191200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 26205 - 26256
Alignment:
Q  31 ttctattgtgagctatttctatttaagaatagctattatagaaaagaaccat 82  Q
    ||||||||| |||||| ||||||| ||||| || ||||||||||||||||||    
T  26205 ttctattgttagctatatctatttgagaatcgcaattatagaaaagaaccat 26256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 232349 - 232311
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  232349 attcatcttttattcttggaattcaataagtgacaattg 232311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 172743 - 172783
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  172743 acaattcatcttttgttcttggaattcaat-agtgacaattg 172783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1092 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1092
Description:

Target: scaffold1092; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 1771 - 1733
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  1771 attcgtcttttattcttggaattcaataagtgacaattg 1733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 12632 - 12594
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  12632 attcatttttttttcttggaattcaataagtgacaattg 12594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 19675 - 19713
Alignment:
Q  199 attcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  19675 attcatcttttattcttggaattcgataagtgacaattg 19713  T

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Target: scaffold0773 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0773
Description:

Target: scaffold0773; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 229
Target Start/End: Original strand, 1114 - 1147
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagt 229  Q
    ||||||||||||||||||||| ||||||||||||    
T  1114 acaattcatcttttgttcttgtaattcaataagt 1147  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 520755 - 520795
Alignment:
Q  196 acaattcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||||||||| |||||||||||| |||||||||||    
T  520755 acaattcatcttttgttattggaattcaat-agtgacaattg 520795  T

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Target: scaffold0231 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 21333 - 21368
Alignment:
Q  201 tcatcttttgttcttggaattcaataagtgacaattg 237  Q
    ||||||||||||||||||||||||||| |||||||||    
T  21333 tcatcttttgttcttggaattcaataa-tgacaattg 21368  T

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