View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2668_high_10 (Length: 255)
Name: NF2668_high_10
Description: NF2668
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2668_high_10 |
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Alignment Details
Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 31758865 - 31759090
Alignment:
| Q |
1 |
tgaagcttatatgttgcgttgtgtattaatttcacatcggcaatgagattttaataataagaacaagaaaaacatatacgttagtctaacaacttcaatg |
100 |
Q |
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| T |
31758865 |
tgaagcttatatgttgcgttgtgtattaatttcacatcggcaatgagattt-aataataagaacaagaaaaacatatacgttagtctaacaacttcaatg |
31758963 |
T |
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| Q |
101 |
tcacaaatttgcaaaacctctttgcatgttgctacatagaagataccattttcctcctttcaactaagttctgattatttatcaagttgctctgcatgct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31758964 |
tcacaaatttgcaaaacctctttgcatgttgctacatagaagataccattttcctcctttcaactaagttctgattatttatcaagttgctctgcatgct |
31759063 |
T |
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| Q |
201 |
aggatataatagcaaatacagaatctt |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
31759064 |
aggatataatagcaaatacagaatctt |
31759090 |
T |
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