View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2668_low_15 (Length: 253)
Name: NF2668_low_15
Description: NF2668
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2668_low_15 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 56 - 213
Target Start/End: Original strand, 3383873 - 3384030
Alignment:
| Q |
56 |
ctgcctcttatttcattgggtgtttttcaccacataatatcaaataaatattaaatacagggttaattatagtacactgcatatattttcggtcacaatt |
155 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
3383873 |
ctgcctcttatttcattgggtgtttttcaccacataatatcaaataaatattaaatacagggttaattatagtacactacatatatttttggtcacaatt |
3383972 |
T |
|
| Q |
156 |
tctatggttaattatatacacaacatattatgacaaaacacaaatgtctccacagttc |
213 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3383973 |
tctatggttaattatatacataacatattatgacaaaacacaaatgtctccacagttc |
3384030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University