View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2668_low_8 (Length: 297)
Name: NF2668_low_8
Description: NF2668
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2668_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 30 - 290
Target Start/End: Original strand, 30770065 - 30770322
Alignment:
| Q |
30 |
ggatcacttcttgatgatgcaaaatctgagacatggtttgttgatgcactcaacaactcagggattctctcaagaggtgtgtcagattctgcaggagatt |
129 |
Q |
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| T |
30770065 |
ggatcacttcttgatgatgcaaaatctgagacatggtttgttgatgcactcaacaactcagggattctctcaagaggtgtgtcagattcagcaggagatt |
30770164 |
T |
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| Q |
130 |
cttttgtgaatcttgataatgttcctgctagtggtgattcaagcaataacttagaatctcaagtagaatcactgactctgcttgaaaacaacaacaataa |
229 |
Q |
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|||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
30770165 |
cttttgtgaatcttgatagtgttcctgcta---gtgattcaagcaataacttggaatctcaagtagaatcattgactctgcttgaaaacaacaacaataa |
30770261 |
T |
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| Q |
230 |
ggttaagaatgtttttgataatgttaatgctgtgaattcaacacctaattcacctatgcta |
290 |
Q |
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||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
30770262 |
ggttaagaatgttcttgataatgttaatgttgtgaattcaacacctaattcacctatgcta |
30770322 |
T |
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