View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2670_low_10 (Length: 250)
Name: NF2670_low_10
Description: NF2670
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2670_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 18 - 242
Target Start/End: Complemental strand, 40925347 - 40925123
Alignment:
| Q |
18 |
atttttatgtccatacaaaatgattttgatatttgacctcaatgatttatcataattctgtaatataaaagataaaattatatcgctctttctgtaccaa |
117 |
Q |
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| T |
40925347 |
atttttatgtccatacaaaatgattttgatatttgacctcaatgatttatcataattctgtaatataaaagataaaattatatcgctctttctgtaccaa |
40925248 |
T |
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| Q |
118 |
aagaaaagcacaattatattttacagatattacaatgaaacaaatcatatataaaatgaatcatacaccgcataaacaacattcattcctttgtaaattg |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
40925247 |
aagaaaagcacaattatattttacagatattacaatgaaacaaatcatatataaaatgaatcatacagcgcataaacaacattcattcctttgtaaattg |
40925148 |
T |
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| Q |
218 |
attcattaaggtgcacattcatctc |
242 |
Q |
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||||||||||||||||||||||||| |
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| T |
40925147 |
attcattaaggtgcacattcatctc |
40925123 |
T |
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