View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2671_low_1 (Length: 1137)

Name: NF2671_low_1
Description: NF2671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2671_low_1
NF2671_low_1
[»] chr4 (52 HSPs)
chr4 (6-663)||(11787231-11787885)
chr4 (6-663)||(11799398-11800052)
chr4 (686-1121)||(11786746-11787182)
chr4 (686-1121)||(11798913-11799349)
chr4 (6-109)||(11783951-11784054)
chr4 (891-1011)||(17077018-17077136)
chr4 (6-106)||(11697767-11697867)
chr4 (1044-1121)||(11786661-11786738)
chr4 (1044-1121)||(11798828-11798905)
chr4 (6-98)||(11707483-11707575)
chr4 (496-659)||(30626587-30626750)
chr4 (891-1011)||(28245900-28246019)
chr4 (891-1011)||(33629771-33629889)
chr4 (891-1002)||(56511409-56511521)
chr4 (7-98)||(11676260-11676351)
chr4 (7-98)||(11684539-11684630)
chr4 (878-1003)||(400457-400580)
chr4 (891-1013)||(27634402-27634523)
chr4 (891-988)||(40197115-40197212)
chr4 (891-1013)||(1923067-1923188)
chr4 (547-659)||(30626921-30627032)
chr4 (547-668)||(12689792-12689912)
chr4 (892-1013)||(29113357-29113477)
chr4 (940-1013)||(5066015-5066087)
chr4 (878-1010)||(21498423-21498556)
chr4 (551-661)||(12689982-12690090)
chr4 (501-643)||(54953732-54953872)
chr4 (890-971)||(7806510-7806589)
chr4 (891-1010)||(12016762-12016883)
chr4 (927-1003)||(21646687-21646761)
chr4 (546-624)||(15844921-15844996)
chr4 (588-654)||(30064249-30064315)
chr4 (589-663)||(41148262-41148335)
chr4 (894-955)||(14945009-14945070)
chr4 (891-980)||(49380785-49380873)
chr4 (545-663)||(15845069-15845188)
chr4 (910-1012)||(41743227-41743328)
chr4 (588-664)||(47742329-47742405)
chr4 (888-952)||(53386214-53386278)
chr4 (954-1013)||(53559381-53559441)
chr4 (726-806)||(3369845-3369927)
chr4 (977-1036)||(28497267-28497326)
chr4 (546-661)||(48188238-48188351)
chr4 (977-1012)||(55100090-55100125)
chr4 (894-955)||(3640320-3640382)
chr4 (976-1034)||(8560026-8560084)
chr4 (588-654)||(30064098-30064163)
chr4 (726-805)||(30627007-30627088)
chr4 (588-654)||(33508983-33509049)
chr4 (493-577)||(3369847-3369932)
chr4 (891-967)||(10390394-10390467)
chr4 (974-1011)||(17077222-17077259)
[»] chr7 (45 HSPs)
chr7 (891-1036)||(33855597-33855742)
chr7 (546-663)||(35828403-35828520)
chr7 (493-659)||(15327893-15328057)
chr7 (493-663)||(24432336-24432505)
chr7 (891-1013)||(4258076-4258196)
chr7 (891-1036)||(16565006-16565149)
chr7 (891-1036)||(16600513-16600656)
chr7 (494-661)||(35828556-35828724)
chr7 (483-659)||(35793365-35793542)
chr7 (891-1011)||(6751583-6751702)
chr7 (868-1013)||(6782920-6783066)
chr7 (893-1036)||(48113907-48114048)
chr7 (891-1013)||(23396721-23396842)
chr7 (894-1003)||(43366318-43366425)
chr7 (891-997)||(258541-258646)
chr7 (892-988)||(23821432-23821526)
chr7 (726-806)||(35828347-35828429)
chr7 (521-662)||(43657742-43657880)
chr7 (891-1011)||(6813156-6813275)
chr7 (891-1011)||(23821549-23821668)
chr7 (496-633)||(24432569-24432705)
chr7 (587-664)||(282570-282646)
chr7 (547-664)||(9477188-9477305)
chr7 (891-1013)||(9378905-9379028)
chr7 (891-971)||(8681996-8682075)
chr7 (726-804)||(35793375-35793455)
chr7 (954-1013)||(5266327-5266387)
chr7 (588-632)||(43077976-43078020)
chr7 (588-632)||(43091954-43091998)
chr7 (547-661)||(47030330-47030441)
chr7 (546-657)||(9477340-9477450)
chr7 (495-601)||(27756267-27756374)
chr7 (975-1034)||(33834145-33834204)
chr7 (589-662)||(282746-282818)
chr7 (954-1034)||(23390558-23390639)
chr7 (984-1036)||(8681883-8681935)
chr7 (727-812)||(27756257-27756344)
chr7 (929-1003)||(40703738-40703811)
chr7 (612-663)||(9143204-9143255)
chr7 (977-1036)||(33855473-33855532)
chr7 (890-971)||(6329653-6329732)
chr7 (588-640)||(44565516-44565565)
chr7 (756-805)||(21939340-21939389)
chr7 (977-1034)||(35866694-35866751)
chr7 (587-640)||(47030542-47030595)
[»] chr3 (59 HSPs)
chr3 (546-668)||(33687852-33687974)
chr3 (527-661)||(33687639-33687773)
chr3 (546-668)||(16883672-16883794)
chr3 (891-1010)||(39956546-39956666)
chr3 (887-1036)||(35015388-35015536)
chr3 (891-1002)||(35011769-35011881)
chr3 (890-1013)||(35358529-35358657)
chr3 (891-1010)||(9264372-9264492)
chr3 (878-1002)||(21833417-21833541)
chr3 (891-1013)||(9264162-9264285)
chr3 (891-1008)||(33909709-33909824)
chr3 (547-668)||(33381565-33381685)
chr3 (545-657)||(16883544-16883656)
chr3 (891-1010)||(22407520-22407640)
chr3 (891-1012)||(12799789-12799907)
chr3 (891-1011)||(40230512-40230631)
chr3 (929-1013)||(42258855-42258938)
chr3 (499-635)||(3354755-3354892)
chr3 (545-664)||(12921500-12921617)
chr3 (863-955)||(39269385-39269477)
chr3 (546-668)||(43902708-43902826)
chr3 (894-1013)||(53640041-53640161)
chr3 (607-666)||(12921630-12921689)
chr3 (547-662)||(15313483-15313598)
chr3 (493-635)||(43902532-43902672)
chr3 (546-662)||(45333674-45333787)
chr3 (890-1011)||(46412112-46412231)
chr3 (891-1013)||(27177524-27177645)
chr3 (588-667)||(53255058-53255138)
chr3 (588-663)||(1807317-1807392)
chr3 (894-952)||(12799985-12800044)
chr3 (891-1013)||(49477439-49477562)
chr3 (727-803)||(49579147-49579225)
chr3 (726-805)||(3354919-3355000)
chr3 (586-632)||(11413339-11413384)
chr3 (726-805)||(16883768-16883849)
chr3 (891-1036)||(44145174-44145316)
chr3 (726-804)||(33687948-33688028)
chr3 (929-1036)||(50692471-50692577)
chr3 (583-661)||(1807170-1807247)
chr3 (894-1013)||(26927021-26927140)
chr3 (493-643)||(50420786-50420935)
chr3 (977-1013)||(51338517-51338553)
chr3 (977-1013)||(53640248-53640284)
chr3 (977-1013)||(54495523-54495559)
chr3 (891-969)||(20737132-20737208)
chr3 (891-955)||(37223687-37223753)
chr3 (722-806)||(50420851-50420937)
chr3 (975-1010)||(54591544-54591579)
chr3 (975-1013)||(29369791-29369829)
chr3 (894-1013)||(32034205-32034324)
chr3 (726-797)||(33687611-33687684)
chr3 (976-1010)||(37058850-37058884)
chr3 (868-905)||(8142635-8142672)
chr3 (977-1010)||(22339733-22339766)
chr3 (977-1010)||(22407727-22407760)
chr3 (894-955)||(25578859-25578920)
chr3 (894-955)||(40926895-40926956)
chr3 (973-1034)||(40927018-40927079)
[»] chr5 (50 HSPs)
chr5 (546-663)||(22408690-22408806)
chr5 (891-1036)||(39268134-39268277)
chr5 (891-1011)||(3015495-3015613)
chr5 (891-1013)||(18107554-18107674)
chr5 (886-1010)||(11632332-11632456)
chr5 (891-1003)||(18107739-18107851)
chr5 (547-662)||(12167010-12167123)
chr5 (891-1036)||(2908615-2908761)
chr5 (897-1010)||(15510583-15510696)
chr5 (891-1012)||(36307797-36307915)
chr5 (891-1010)||(48183-48303)
chr5 (526-663)||(33087614-33087747)
chr5 (891-1010)||(34457208-34457328)
chr5 (607-662)||(2427087-2427142)
chr5 (588-663)||(6464218-6464293)
chr5 (891-1013)||(43490332-43490455)
chr5 (546-643)||(36628588-36628686)
chr5 (585-658)||(37426605-37426676)
chr5 (546-631)||(12166859-12166944)
chr5 (548-668)||(22408528-22408652)
chr5 (588-632)||(20126591-20126635)
chr5 (927-1013)||(3763044-3763128)
chr5 (733-802)||(37426695-37426765)
chr5 (976-1036)||(2908822-2908882)
chr5 (546-661)||(20987000-20987113)
chr5 (878-1013)||(37781920-37782065)
chr5 (929-1003)||(28156185-28156257)
chr5 (878-1013)||(37656808-37656952)
chr5 (585-668)||(42169178-42169261)
chr5 (929-1013)||(13413735-13413818)
chr5 (546-664)||(20987168-20987285)
chr5 (547-601)||(37426467-37426521)
chr5 (585-630)||(128454-128499)
chr5 (588-668)||(7899597-7899678)
chr5 (756-805)||(20364681-20364730)
chr5 (756-805)||(20369399-20369448)
chr5 (868-904)||(11896671-11896707)
chr5 (954-1013)||(32501182-32501239)
chr5 (546-629)||(36501454-36501534)
chr5 (977-1037)||(36878318-36878378)
chr5 (891-951)||(36878438-36878498)
chr5 (957-1012)||(395339-395394)
chr5 (546-629)||(11168130-11168213)
chr5 (977-1036)||(39268010-39268069)
chr5 (756-802)||(18159714-18159760)
chr5 (979-1013)||(30330643-30330677)
chr5 (878-955)||(8081051-8081128)
chr5 (550-657)||(13427859-13427964)
chr5 (891-987)||(36882306-36882403)
chr5 (625-662)||(37426528-37426565)
[»] chr6 (43 HSPs)
chr6 (891-1036)||(25998929-25999074)
chr6 (493-662)||(12101601-12101769)
chr6 (891-1036)||(26098454-26098599)
chr6 (891-1036)||(26098660-26098805)
chr6 (494-655)||(2164610-2164770)
chr6 (494-655)||(2176243-2176403)
chr6 (891-1011)||(11316955-11317074)
chr6 (521-640)||(1614843-1614962)
chr6 (891-1011)||(30526950-30527068)
chr6 (893-971)||(2904908-2904986)
chr6 (892-1010)||(16590088-16590209)
chr6 (892-1010)||(16605171-16605292)
chr6 (891-1035)||(19712458-19712601)
chr6 (614-667)||(1894640-1894693)
chr6 (893-1011)||(12124772-12124887)
chr6 (546-632)||(12798966-12799052)
chr6 (891-1003)||(29742520-29742631)
chr6 (894-1013)||(11313458-11313578)
chr6 (894-1013)||(13692244-13692362)
chr6 (977-1036)||(25998809-25998868)
chr6 (977-1036)||(26098334-26098393)
chr6 (954-1010)||(15101190-15101247)
chr6 (546-663)||(30369965-30370081)
chr6 (546-668)||(2164473-2164591)
chr6 (546-668)||(2176106-2176224)
chr6 (891-955)||(8929957-8930021)
chr6 (891-1010)||(18494353-18494473)
chr6 (977-1013)||(24558575-24558611)
chr6 (891-955)||(30539347-30539411)
chr6 (585-663)||(12798818-12798895)
chr6 (585-662)||(28574656-28574731)
chr6 (908-1011)||(15102830-15102931)
chr6 (894-1013)||(24558698-24558816)
chr6 (722-801)||(1894712-1894791)
chr6 (726-803)||(2164691-2164770)
chr6 (726-803)||(2176324-2176403)
chr6 (611-663)||(13398585-13398636)
chr6 (956-1002)||(9496473-9496519)
chr6 (734-807)||(12798724-12798798)
chr6 (973-1011)||(15102703-15102741)
chr6 (891-995)||(3713107-3713209)
chr6 (868-905)||(3921617-3921654)
chr6 (490-562)||(15139569-15139642)
[»] chr8 (30 HSPs)
chr8 (510-662)||(29219094-29219246)
chr8 (491-643)||(34232756-34232907)
chr8 (891-1013)||(30065897-30066019)
chr8 (891-1013)||(43599423-43599546)
chr8 (891-1013)||(15857086-15857207)
chr8 (891-1034)||(33435791-33435932)
chr8 (894-1013)||(45122220-45122339)
chr8 (585-632)||(18896520-18896567)
chr8 (891-1013)||(35561571-35561694)
chr8 (526-668)||(45522332-45522471)
chr8 (547-631)||(5899456-5899538)
chr8 (546-635)||(18929356-18929444)
chr8 (547-641)||(4694920-4695013)
chr8 (929-1013)||(8559754-8559837)
chr8 (547-631)||(18929526-18929613)
chr8 (612-664)||(5899311-5899363)
chr8 (546-641)||(45522191-45522284)
chr8 (547-663)||(2044729-2044843)
chr8 (894-955)||(22188800-22188861)
chr8 (977-1013)||(5720943-5720979)
chr8 (977-1013)||(18313776-18313812)
chr8 (894-969)||(25186638-25186714)
chr8 (612-668)||(26889530-26889585)
chr8 (733-805)||(9498908-9498982)
chr8 (894-945)||(36039930-36039981)
chr8 (894-969)||(41456424-41456498)
chr8 (547-641)||(2044888-2044981)
chr8 (611-661)||(29219286-29219336)
chr8 (512-570)||(29219359-29219417)
chr8 (612-668)||(1003683-1003740)
[»] chr2 (46 HSPs)
chr2 (888-1034)||(32667087-32667232)
chr2 (891-1013)||(40009879-40010002)
chr2 (891-1013)||(33985845-33985967)
chr2 (547-659)||(13491704-13491814)
chr2 (894-1013)||(17727312-17727432)
chr2 (725-806)||(31227121-31227204)
chr2 (890-1013)||(29695415-29695538)
chr2 (496-661)||(31227033-31227199)
chr2 (489-663)||(35125069-35125240)
chr2 (894-997)||(2464934-2465034)
chr2 (891-1013)||(25082731-25082845)
chr2 (890-1011)||(883961-884083)
chr2 (546-628)||(13491531-13491613)
chr2 (546-662)||(35500234-35500351)
chr2 (885-1000)||(4439188-4439303)
chr2 (495-599)||(13025532-13025636)
chr2 (547-657)||(3198683-3198791)
chr2 (929-1013)||(883677-883760)
chr2 (954-1036)||(8044599-8044681)
chr2 (484-622)||(14289257-14289394)
chr2 (496-601)||(23993864-23993970)
chr2 (910-1002)||(22447230-22447322)
chr2 (891-946)||(93672-93727)
chr2 (974-1013)||(10570924-10570963)
chr2 (868-915)||(10571029-10571076)
chr2 (891-1013)||(12432010-12432133)
chr2 (933-1010)||(19859986-19860062)
chr2 (549-632)||(29370773-29370855)
chr2 (890-984)||(33277455-33277546)
chr2 (547-633)||(31226906-31226991)
chr2 (586-632)||(43519382-43519427)
chr2 (611-668)||(8740271-8740328)
chr2 (891-952)||(39108332-39108393)
chr2 (977-1013)||(6986492-6986528)
chr2 (733-806)||(14289264-14289338)
chr2 (891-946)||(93399-93454)
chr2 (583-658)||(29370907-29370981)
chr2 (596-662)||(8030346-8030411)
chr2 (975-1013)||(10485168-10485206)
chr2 (756-806)||(23993721-23993771)
chr2 (733-800)||(31226855-31226924)
chr2 (891-920)||(7257570-7257599)
chr2 (894-955)||(8044723-8044784)
chr2 (588-649)||(12802361-12802422)
chr2 (894-955)||(17265150-17265211)
chr2 (493-609)||(23993723-23993839)
[»] chr1 (52 HSPs)
chr1 (546-662)||(1406365-1406481)
chr1 (512-662)||(10231020-10231170)
chr1 (493-663)||(39384472-39384641)
chr1 (547-662)||(39384292-39384407)
chr1 (891-1013)||(15391931-15392053)
chr1 (891-1036)||(29413253-29413399)
chr1 (891-1036)||(38871002-38871147)
chr1 (546-661)||(13574871-13574986)
chr1 (891-1010)||(12314483-12314603)
chr1 (547-642)||(13575067-13575161)
chr1 (495-635)||(10532428-10532569)
chr1 (547-664)||(31651547-31651664)
chr1 (891-1013)||(2997132-2997253)
chr1 (495-598)||(84228-84331)
chr1 (891-1013)||(5325002-5325125)
chr1 (545-665)||(6940813-6940927)
chr1 (493-631)||(10532215-10532353)
chr1 (546-664)||(39411637-39411752)
chr1 (891-1013)||(42844891-42845014)
chr1 (891-1010)||(43361631-43361749)
chr1 (546-658)||(10230840-10230952)
chr1 (547-661)||(51690347-51690459)
chr1 (548-662)||(29816317-29816430)
chr1 (929-1004)||(22892773-22892847)
chr1 (891-1013)||(24382644-24382768)
chr1 (954-1034)||(47086332-47086413)
chr1 (894-1013)||(3774141-3774261)
chr1 (954-1002)||(3969009-3969057)
chr1 (891-971)||(11590531-11590610)
chr1 (569-632)||(3814836-3814899)
chr1 (977-1036)||(38871208-38871267)
chr1 (726-806)||(51690434-51690516)
chr1 (588-654)||(7196772-7196838)
chr1 (929-1013)||(39648954-39649036)
chr1 (611-668)||(12075057-12075113)
chr1 (546-618)||(22347571-22347646)
chr1 (546-643)||(37008451-37008547)
chr1 (891-951)||(20429163-20429223)
chr1 (975-1011)||(22892499-22892535)
chr1 (862-906)||(38733204-38733248)
chr1 (894-962)||(40073371-40073438)
chr1 (936-1034)||(21428113-21428211)
chr1 (890-1013)||(46098588-46098711)
chr1 (894-1013)||(7171644-7171765)
chr1 (589-662)||(37008314-37008385)
chr1 (733-802)||(39411894-39411963)
chr1 (977-1035)||(45395544-45395602)
chr1 (756-805)||(10532214-10532263)
chr1 (726-802)||(13575136-13575213)
chr1 (547-600)||(31907899-31907951)
chr1 (976-1013)||(39649160-39649197)
chr1 (547-632)||(44743644-44743729)
[»] scaffold0400 (1 HSPs)
scaffold0400 (546-663)||(8591-8708)
[»] scaffold0365 (1 HSPs)
scaffold0365 (546-663)||(9234-9351)
[»] scaffold0286 (3 HSPs)
scaffold0286 (494-655)||(17639-17799)
scaffold0286 (546-666)||(17820-17936)
scaffold0286 (726-803)||(17639-17718)
[»] scaffold1138 (1 HSPs)
scaffold1138 (893-1034)||(1928-2069)
[»] scaffold0025 (1 HSPs)
scaffold0025 (490-663)||(151509-151681)
[»] scaffold1088 (2 HSPs)
scaffold1088 (496-600)||(2077-2180)
scaffold1088 (726-801)||(2104-2180)
[»] scaffold0434 (1 HSPs)
scaffold0434 (891-1010)||(13418-13538)
[»] scaffold0172 (2 HSPs)
scaffold0172 (551-643)||(9604-9694)
scaffold0172 (722-804)||(9867-9950)
[»] scaffold0006 (1 HSPs)
scaffold0006 (546-635)||(162216-162303)
[»] scaffold0294 (1 HSPs)
scaffold0294 (6-98)||(19547-19639)
[»] scaffold0092 (1 HSPs)
scaffold0092 (733-805)||(37783-37856)
[»] scaffold0017 (1 HSPs)
scaffold0017 (611-668)||(27636-27692)
[»] scaffold0010 (1 HSPs)
scaffold0010 (726-801)||(128149-128226)
[»] scaffold0316 (1 HSPs)
scaffold0316 (583-643)||(17608-17666)


Alignment Details
Target: chr4 (Bit Score: 534; Significance: 0; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 534; E-Value: 0
Query Start/End: Original strand, 6 - 663
Target Start/End: Complemental strand, 11787885 - 11787231
Alignment:
Q  6 gagtgagatgaagaataagataacttgtgactgaggagaacaaaatgtgatggaaggaagcatagccgacaacgttaacaagcctagtccctgcaattca 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11787885 gagtgagatgaagaataagataacttgtgactgaggagaacaaaatgtgatggaaggcagcatagccgacaacgttaacaagcctagtccctgcaattca 11787786  T
Q  106 ttaaaacaatgagtcaatgataacttgtgactggttttggatatctgaatgtcttcccactacttccatgtctgttttgatgaatggaagacttgcaaaa 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11787785 ttaaaacaatgagtcaatgataacttgtgactggttttggatatctgaatgtcttcccactacttccatgtctgttttgatgaatggaagacttgcaaaa 11787686  T
Q  206 gagtttccggcgagaaggggaatcagacaaggatagccgttatccagtttggtattgatgaagtgactatgccacacttacaacattgcaacgacacaaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  11787685 gagtttccggcgagaaggggaatcagacaaggatagccgttatccagtttggtatagatgaagtgactataccacacttacaacattgcaacgacacaaa 11787586  T
Q  306 gattgtggtgaagaaaagttgaaaaaacaggtgat--taaggcaattttgcaagtgtttgaattagtgtctagattgatggtaaactttcgtaaaaacgt 403  Q
    ||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11787585 gattgtggtgaagaaaagttggaaaaacaggtgattataaggcaattttgcaagtgtttgaattagtgtctagattgatgggaaactttcgtaaaaacgt 11787486  T
Q  404 tctaatgggtgtaaatatacatcatacatcgaaagtagaggcaacatgtgtgataaatttcaaagttggtagtttgtcattaaaatattggcttaatagc 503  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11787485 tctaatgggtgtaaatatacatcatacatcgaaagtagaggcaacatgtgtgataaatttcaaagttggtagtttgtcatttaaatattggcttaatagc 11787386  T
Q  504 agttttgtcccctga-ggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggt 602  Q
    |||||||   ||| | | || || ||||||||||||| |||| |||||||||||||||||||||||||||| |||  ||| |||||||||||||||||||    
T  11787385 agttttg--gcctaatgtatcagcaagttacgattttggcttcctaacaaaataaaatacaatccagccccctaagaaccatcccttttgcagttttggt 11787288  T
Q  603 ccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaatttttttt 663  Q
    |||||||  ||||||||||||| |||||||||||||||||||    |||||||||||||||    
T  11787287 ccctcaggtcaattttgaccaaatcaatgctgaagtggacgt----tgtgtaatttttttt 11787231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 534; E-Value: 0
Query Start/End: Original strand, 6 - 663
Target Start/End: Complemental strand, 11800052 - 11799398
Alignment:
Q  6 gagtgagatgaagaataagataacttgtgactgaggagaacaaaatgtgatggaaggaagcatagccgacaacgttaacaagcctagtccctgcaattca 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11800052 gagtgagatgaagaataagataacttgtgactgaggagaacaaaatgtgatggaaggcagcatagccgacaacgttaacaagcctagtccctgcaattca 11799953  T
Q  106 ttaaaacaatgagtcaatgataacttgtgactggttttggatatctgaatgtcttcccactacttccatgtctgttttgatgaatggaagacttgcaaaa 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11799952 ttaaaacaatgagtcaatgataacttgtgactggttttggatatctgaatgtcttcccactacttccatgtctgttttgatgaatggaagacttgcaaaa 11799853  T
Q  206 gagtttccggcgagaaggggaatcagacaaggatagccgttatccagtttggtattgatgaagtgactatgccacacttacaacattgcaacgacacaaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  11799852 gagtttccggcgagaaggggaatcagacaaggatagccgttatccagtttggtatagatgaagtgactataccacacttacaacattgcaacgacacaaa 11799753  T
Q  306 gattgtggtgaagaaaagttgaaaaaacaggtgat--taaggcaattttgcaagtgtttgaattagtgtctagattgatggtaaactttcgtaaaaacgt 403  Q
    ||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11799752 gattgtggtgaagaaaagttggaaaaacaggtgattataaggcaattttgcaagtgtttgaattagtgtctagattgatgggaaactttcgtaaaaacgt 11799653  T
Q  404 tctaatgggtgtaaatatacatcatacatcgaaagtagaggcaacatgtgtgataaatttcaaagttggtagtttgtcattaaaatattggcttaatagc 503  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11799652 tctaatgggtgtaaatatacatcatacatcgaaagtagaggcaacatgtgtgataaatttcaaagttggtagtttgtcatttaaatattggcttaatagc 11799553  T
Q  504 agttttgtcccctga-ggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggt 602  Q
    |||||||   ||| | | || || ||||||||||||| |||| |||||||||||||||||||||||||||| |||  ||| |||||||||||||||||||    
T  11799552 agttttg--gcctaatgtatcagcaagttacgattttggcttcctaacaaaataaaatacaatccagccccctaagaaccatcccttttgcagttttggt 11799455  T
Q  603 ccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaatttttttt 663  Q
    |||||||  ||||||||||||| |||||||||||||||||||    |||||||||||||||    
T  11799454 ccctcaggtcaattttgaccaaatcaatgctgaagtggacgt----tgtgtaatttttttt 11799398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 361; E-Value: 0
Query Start/End: Original strand, 686 - 1121
Target Start/End: Complemental strand, 11787182 - 11786746
Alignment:
Q  686 tttttataataaataaaattaacataattacacacgtagagggctgtattgtattttattttgccagggg-caaaatcgcaactttctgatatttaggag 784  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  11787182 tttttataataaataaaattaacataattacacacgtagagggctcgattgtattttattttgtcagggggcaaaatcgcaactttctgatatttaggag 11787083  T
Q  785 ggcaaaactgctattaagccttaaatatttggttctaccaactgggggagatcctgcgagagaaggaatgtggaaacagattttgttaggtttaaccacg 884  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  11787082 ggcaaaactgctattaagccttaaatatttggttctaccaattgggggagatcctgcgagagaaggaatgtggaaaccgattttgttaggcttaaccacg 11786983  T
Q  885 atttctaacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattggga 984  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||    
T  11786982 atttctaacatgatatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagcccaaagagagtgttgggtgtgagggattgtattggga 11786883  T
Q  985 aaaatccaagtcccacatcagatagataacaccgatgataatagtttataaactttaattgctatttttaaatttaaaaataatttgatacattgagaca 1084  Q
    |||| | |||| ||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11786882 aaaacctaagttccacatcggatagataacactgatgataatagtttataaactttaattgctttttttaaatttaaaaataatttgatacattgagaca 11786783  T
Q  1085 aagtgtgtcgagaaaaagatgagggtgggttcattct 1121  Q
    |||||||||||||||||||||||||||||||||||||    
T  11786782 aagtgtgtcgagaaaaagatgagggtgggttcattct 11786746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 361; E-Value: 0
Query Start/End: Original strand, 686 - 1121
Target Start/End: Complemental strand, 11799349 - 11798913
Alignment:
Q  686 tttttataataaataaaattaacataattacacacgtagagggctgtattgtattttattttgccagggg-caaaatcgcaactttctgatatttaggag 784  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  11799349 tttttataataaataaaattaacataattacacacgtagagggctcgattgtattttattttgtcagggggcaaaatcgcaactttctgatatttaggag 11799250  T
Q  785 ggcaaaactgctattaagccttaaatatttggttctaccaactgggggagatcctgcgagagaaggaatgtggaaacagattttgttaggtttaaccacg 884  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  11799249 ggcaaaactgctattaagccttaaatatttggttctaccaattgggggagatcctgcgagagaaggaatgtggaaaccgattttgttaggcttaaccacg 11799150  T
Q  885 atttctaacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattggga 984  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||    
T  11799149 atttctaacatgatatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagcccaaagagagtgttgggtgtgagggattgtattggga 11799050  T
Q  985 aaaatccaagtcccacatcagatagataacaccgatgataatagtttataaactttaattgctatttttaaatttaaaaataatttgatacattgagaca 1084  Q
    |||| | |||| ||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11799049 aaaacctaagttccacatcggatagataacactgatgataatagtttataaactttaattgctttttttaaatttaaaaataatttgatacattgagaca 11798950  T
Q  1085 aagtgtgtcgagaaaaagatgagggtgggttcattct 1121  Q
    |||||||||||||||||||||||||||||||||||||    
T  11798949 aagtgtgtcgagaaaaagatgagggtgggttcattct 11798913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 9e-30
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 11784054 - 11783951
Alignment:
Q  6 gagtgagatgaagaataagataacttgtgactgaggagaacaaaatgtgatggaaggaagcatagccgacaacgttaacaagcctagtccctgcaattca 105  Q
    |||||||| ||||||||| || |||||||||||||||||| ||| ||| |||||||| |||||||||||||| ||||||||||||||||||||||| |||    
T  11784054 gagtgagaagaagaataacattacttgtgactgaggagaataaattgtaatggaaggcagcatagccgacaatgttaacaagcctagtccctgcaaatca 11783955  T
Q  106 ttaa 109  Q
    ||||    
T  11783954 ttaa 11783951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 891 - 1011
Target Start/End: Complemental strand, 17077136 - 17077018
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatc 990  Q
    ||||||||||||||| |||||||||||||| | || |||||||| ||||||||||| | ||||||  || ||||||||||| | |||||||||||||| |    
T  17077136 aacatggtatcagagcttgtcgaattcaagggccacctacctattcacgcaccaagcctaaagag--tgatgggcgtgaggtggtgtattgggaaaaacc 17077039  T
Q  991 caagtcccacatcagatagat 1011  Q
    ||||||||||||| |||||||    
T  17077038 caagtcccacatcggatagat 17077018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 11697867 - 11697767
Alignment:
Q  6 gagtgagatgaagaataagataacttgtgactgaggagaacaaaatgtgatggaaggaagcatagccgacaacgttaacaagcctagtccctgcaattca 105  Q
    ||||||||||||||||||||| |||||||| |||| ||||||| ||||||  |||||||||||||| || || |||||||||||||||||||| ||||||    
T  11697867 gagtgagatgaagaataagattacttgtgattgagtagaacaagatgtgagtgaaggaagcatagctgataatgttaacaagcctagtccctgtaattca 11697768  T
Q  106 t 106  Q
    |    
T  11697767 t 11697767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 1044 - 1121
Target Start/End: Complemental strand, 11786738 - 11786661
Alignment:
Q  1044 tgctatttttaaatttaaaaataatttgatacattgagacaaagtgtgtcgagaaaaagatgagggtgggttcattct 1121  Q
    |||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||    
T  11786738 tgcttttttaaaatttaaaaataatttgatacattgagaaaaagtgtgtcgagaaaacgatgagggtggcttcattct 11786661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 1044 - 1121
Target Start/End: Complemental strand, 11798905 - 11798828
Alignment:
Q  1044 tgctatttttaaatttaaaaataatttgatacattgagacaaagtgtgtcgagaaaaagatgagggtgggttcattct 1121  Q
    |||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||    
T  11798905 tgcttttttaaaatttaaaaataatttgatacattgagaaaaagtgtgtcgagaaaacgatgagggtggcttcattct 11798828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 11707575 - 11707483
Alignment:
Q  6 gagtgagatgaagaataagataacttgtgactgaggagaacaaaatgtgatggaaggaagcatagccgacaacgttaacaagcctagtccctg 98  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||  ||||| |||| ||| || || ||||||||||||||||||||    
T  11707575 gagtgagatgaagaataagattacttgtgattgaggagaacaaaatgtgagtgaagggagcaaagctgataatgttaacaagcctagtccctg 11707483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 496 - 659
Target Start/End: Original strand, 30626587 - 30626750
Alignment:
Q  496 ttaatagcagttttgtcccctgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcag 595  Q
    ||||||||||||||| ||||| || || ||||| || ||||||| || | ||||||||| |||||||||| ||| ||| ||| ||| | |||||||||||    
T  30626587 ttaatagcagttttggcccctaagtatcaggaaattgcgattttggcctcctaacaaaagaaaatacaattcagtcccctaaatactgccccttttgcag 30626686  T
Q  596 ttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaatttt 659  Q
    |||||| | | ||  |||||||||||||| |||| |||||  |||||| || ||||||||||||    
T  30626687 ttttggcctcccaagccaattttgaccaattcaacgctgacatggacgccacgtgtgtaatttt 30626750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 891 - 1011
Target Start/End: Original strand, 28245900 - 28246019
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaat 989  Q
    ||||||||||||||| |||||||||||||| | || |||||||| ||||||||||  ||||  |||||| ||||||||| || | ||||||||||||||     
T  28245900 aacatggtatcagagcttgtcgaattcaagggccacctacctattcacgcaccaaacccaa--agagtgctgggcgtgaggggggtgtattgggaaaaac 28245997  T
Q  990 ccaagtcccacatcagatagat 1011  Q
    |||||||||||||| |||||||    
T  28245998 ccaagtcccacatcggatagat 28246019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 891 - 1011
Target Start/End: Original strand, 33629771 - 33629889
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatc 990  Q
    ||||||||||||||| ||||||| ||||||   || |||||||| ||||||||||| ||||||||  || ||||||||||  | |||||||||||||| |    
T  33629771 aacatggtatcagagcttgtcgacttcaaggaccacctacctattcacgcaccaagcccaaagag--tgctgggcgtgagtgggtgtattgggaaaaacc 33629868  T
Q  991 caagtcccacatcagatagat 1011  Q
    ||||||||||||| |||||||    
T  33629869 caagtcccacatcggatagat 33629889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 891 - 1002
Target Start/End: Original strand, 56511409 - 56511521
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaat 989  Q
    ||||||||||||||| |||||||||||||| |  | |||||||||||||||||||| ||||  |||| | ||||||||| || | ||||||||||||||     
T  56511409 aacatggtatcagagcttgtcgaattcaagggctacctacctatccacgcaccaagtccaagaagagagctgggcgtgaggggggtgtattgggaaaaac 56511508  T
Q  990 ccaagtcccacat 1002  Q
    |||||||||||||    
T  56511509 ccaagtcccacat 56511521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 11676351 - 11676260
Alignment:
Q  7 agtgagatgaagaataagataacttgtgactgaggagaacaaaatgtgatggaaggaagcatagccgacaacgttaacaagcctagtccctg 98  Q
    ||||||||||| |||||||| |||||||||| |||||||||  ||||||  |||||||||||||| || || ||||||||||||||||||||    
T  11676351 agtgagatgaaaaataagattacttgtgactcaggagaacaggatgtgagagaaggaagcatagctgataatgttaacaagcctagtccctg 11676260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 11684630 - 11684539
Alignment:
Q  7 agtgagatgaagaataagataacttgtgactgaggagaacaaaatgtgatggaaggaagcatagccgacaacgttaacaagcctagtccctg 98  Q
    ||||||||||| |||||||| |||||||||| |||||||||  ||||||  |||||||||||||| || || ||||||||||||||||||||    
T  11684630 agtgagatgaaaaataagattacttgtgactcaggagaacaggatgtgagagaaggaagcatagctgataatgttaacaagcctagtccctg 11684539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 878 - 1003
Target Start/End: Complemental strand, 400580 - 400457
Alignment:
Q  878 aaccacgatttctaacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgt 977  Q
    |||||| ||||||||| ||||||||||| |||||||||||||| |||| |||| | | ||||||||||| ||||  ||| |||||||||||||| | |||    
T  400580 aaccacaatttctaacctggtatcagagcttgtcgaattcaagggtcacctacttcttcacgcaccaagcccaa--agaatgttgggcgtgagggggtgt 400483  T
Q  978 attgggaaaaatccaagtcccacatc 1003  Q
    ||  ||||||| | ||||||||||||    
T  400482 ataaggaaaaacctaagtcccacatc 400457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 891 - 1013
Target Start/End: Complemental strand, 27634523 - 27634402
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaa 988  Q
    ||||||||||||||| |||||||||||||| | |  |||  ||||| ||||||||||| ||||||||  |||||||||||||| || |||||||||||||    
T  27634523 aacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag--tgttgggcgtgaggggt-gtattgggaaaaa 27634427  T
Q  989 tccaagtcccacatcagatagataa 1013  Q
     | |||||||||||| |||||||||    
T  27634426 ccaaagtcccacatcggatagataa 27634402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 891 - 988
Target Start/End: Original strand, 40197115 - 40197212
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaa 988  Q
    |||||||||| ||||||||||||||||||| | || ||||||||| ||||| ||||  |||| |||||||||||| ||||| ||||| ||||||||||    
T  40197115 aacatggtattagagtttgtcgaattcaagggccacctacctatcaacgcagcaagctcaaaaagagtgttgggcatgaggggttgttttgggaaaaa 40197212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 891 - 1013
Target Start/End: Complemental strand, 1923188 - 1923067
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaat 989  Q
    ||||||||||||||| ||||| |||||||| | || |||   || ||||||||||| ||||||||  |||||||||||| || | ||||||||||||||     
T  1923188 aacatggtatcagagcttgtccaattcaagggccacctaatgattcacgcaccaagcccaaagag--tgttgggcgtgacgggggtgtattgggaaaaac 1923091  T
Q  990 ccaagtcccacatcagatagataa 1013  Q
    ||| ||||||||||||||||||||    
T  1923090 ccatgtcccacatcagatagataa 1923067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 547 - 659
Target Start/End: Complemental strand, 30627032 - 30626921
Alignment:
Q  547 taacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtca 646  Q
    ||||||||||||||||||| |||||||| || | | | ||||||||||||||||| ||| ||  | |||||||||||| |||| ||||| ||||||| ||    
T  30627032 taacaaaataaaatacaattcagcccct-aagtgctgccccttttgcagttttggccccccattctaattttgaccaattcaacgctgacgtggacgcca 30626934  T
Q  647 tgtgtgtaatttt 659  Q
    |||||||||||||    
T  30626933 tgtgtgtaatttt 30626921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 547 - 668
Target Start/End: Original strand, 12689792 - 12689912
Alignment:
Q  547 taacaaaataaaatacaatccagcccct-taattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtc 645  Q
    ||||||||||||||  ||| ||| |||| ||||| | ||||||||||||||||||| |||  |||||||||||||||| |||||||||  ||||| || |    
T  12689792 taacaaaataaaattaaattcagtccctctaattgctgtcccttttgcagttttggccccctagaccaattttgaccatgtcaatgct--agtggtcgcc 12689889  T
Q  646 atgtgtgtaattttttttaatta 668  Q
    |  ||||||||||||||||||||    
T  12689890 acatgtgtaattttttttaatta 12689912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 892 - 1013
Target Start/End: Original strand, 29113357 - 29113477
Alignment:
Q  892 acatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaatc 990  Q
    |||||||||||||  |||||||||||||| | || ||||  || ||||||||||| ||||||||  || ||||||||| || | |||||||||||||| |    
T  29113357 acatggtatcagaacttgtcgaattcaagggccacctactgattcacgcaccaagcccaaagag--tgctgggcgtgacgggggtgtattgggaaaaacc 29113454  T
Q  991 caagtcccacatcagatagataa 1013  Q
    || ||||||||||||||||||||    
T  29113455 catgtcccacatcagatagataa 29113477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 940 - 1013
Target Start/End: Original strand, 5066015 - 5066087
Alignment:
Q  940 caccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatccaagtcccacatcagatagataa 1013  Q
    ||||||| ||||| |||||||||||||||||| | ||||||||||||||| |||||||||||||||||| ||||    
T  5066015 caccaagcccaaa-agagtgttgggcgtgagggggtgtattgggaaaaattcaagtcccacatcagataaataa 5066087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 878 - 1010
Target Start/End: Original strand, 21498423 - 21498556
Alignment:
Q  878 aaccacgatttctaacatggtatcagagtttgtcgaattcaagagtcatct--acctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagt 974  Q
    ||||||||||||||| |||||||||||| |||||||||||||| | |  ||  |||||| ||||||||||| | ||  |||||| ||||| ||| || |     
T  21498423 aaccacgatttctaatatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcctaa--agagtgctgggcatgagggggg 21498520  T
Q  975 tgtattgggaaaaatccaagtcccacatcagataga 1010  Q
    |||||||||||||| |||||||||||||| ||||||    
T  21498521 tgtattgggaaaaacccaagtcccacatcggataga 21498556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 551 - 661
Target Start/End: Complemental strand, 12690090 - 12689982
Alignment:
Q  551 aaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtg 650  Q
    ||||||||||||||| ||||||| ||| ||| |  | |||||||||||||| |||  ||  |||||||||||||||||||||||| ||||||| ||  ||    
T  12690090 aaaataaaatacaattcagccccctaagtactgctcattttgcagttttggcccc--agggcaattttgaccaagtcaatgctgacgtggacgccacatg 12689993  T
Q  651 tgtaatttttt 661  Q
    |||||||||||    
T  12689992 tgtaatttttt 12689982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 501 - 643
Target Start/End: Original strand, 54953732 - 54953872
Alignment:
Q  501 agcagttttgtcccctgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttg 600  Q
    |||||||||| ||||| || ||||||||||| |||||||  |    ||||||||||||||| ||| ||||||||||| |||    ||||||||||||||     
T  54953732 agcagttttgccccctaagtattaggaagttgcgattttgaccca-taacaaaataaaatataattcagccccttaagtactactccttttgcagtttta 54953830  T
Q  601 gtccctcagaccaattttgaccaagtcaatgctgaagtggacg 643  Q
    | ||||||  ||||||||||||||||||||| ||| |||||||    
T  54953831 g-ccctcatgccaattttgaccaagtcaatgttgacgtggacg 54953872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 890 - 971
Target Start/End: Complemental strand, 7806589 - 7806510
Alignment:
Q  890 taacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgagg 971  Q
    |||||||||||||||| || ||||||||||| | || |||||||| ||||||||||| ||||  |||||| |||||||||||    
T  7806589 taacatggtatcagagcttttcgaattcaagggacacctacctattcacgcaccaagcccaa--agagtgctgggcgtgagg 7806510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 891 - 1010
Target Start/End: Complemental strand, 12016883 - 12016762
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaag-agt-catctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt--tgtattgggaaa 986  Q
    ||||||||||||||| |||||||||||||| | | | |  |||||| ||| ||||||| ||||||||  |||||||||||||| |   ||||||||||||    
T  12016883 aacatggtatcagagcttgtcgaattcaaggactgcctaaacctattcacacaccaagcccaaagag--tgttgggcgtgagggggggtgtattgggaaa 12016786  T
Q  987 aatccaagtcccacatcagataga 1010  Q
    || |||||||||||||| ||||||    
T  12016785 aacccaagtcccacatcggataga 12016762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 927 - 1003
Target Start/End: Complemental strand, 21646761 - 21646687
Alignment:
Q  927 ctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatccaagtcccacatc 1003  Q
    |||||||||||| ||||||  ||||||||  |||||||||||||||| | |||||| |||||| |||||||||||||    
T  21646761 ctacctatccacacaccaaacccaaagag--tgttgggcgtgaggaggtctattggaaaaaattcaagtcccacatc 21646687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 546 - 624
Target Start/End: Original strand, 15844921 - 15844996
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaa 624  Q
    ||||||||||||||||||||| || ||||||| ||| || |||||||||||||| | ||| ||||||||||||||||||    
T  15844921 ctaacaaaataaaatacaatctag-cccttaagtactgt-ccttttgcagtttttgaccc-cagaccaattttgaccaa 15844996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 588 - 654
Target Start/End: Complemental strand, 30064315 - 30064249
Alignment:
Q  588 ttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgta 654  Q
    |||||||||||||| |||||||  |||||||||||||||||| | ||| ||||||| || |||||||    
T  30064315 ttttgcagttttggcccctcaggtcaattttgaccaagtcaaagttgacgtggacgccacgtgtgta 30064249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 589 - 663
Target Start/End: Original strand, 41148262 - 41148335
Alignment:
Q  589 tttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaatttttttt 663  Q
    |||||| |||||| |||  |||||||||||||||||||||||||||| |||| || ||  |||||||||||||||    
T  41148262 tttgcacttttggccccctagaccaattttgaccaagtcaatgctgatgtgg-cgccacatgtgtaatttttttt 41148335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 894 - 955
Target Start/End: Original strand, 14945009 - 14945070
Alignment:
Q  894 atggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagag 955  Q
    ||||||||||||  ||||||||||||| |||| ||||| || ||||||||||| ||||||||    
T  14945009 atggtatcagagcatgtcgaattcaagggtcacctaccgattcacgcaccaagcccaaagag 14945070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 891 - 980
Target Start/End: Complemental strand, 49380873 - 49380785
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtatt 980  Q
    ||||||||||||||| |||||||||| ||| | |  |||||||| ||||||||||| || || |||||| ||||||||||| | ||||||    
T  49380873 aacatggtatcagagcttgtcgaatttaagggccgcctacctattcacgcaccaagccccaa-agagtgctgggcgtgagggggtgtatt 49380785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 545 - 663
Target Start/End: Complemental strand, 15845188 - 15845069
Alignment:
Q  545 tctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctc---agaccaattttgaccaagtcaatgctgaagtgga 641  Q
    ||||||||||||||||||||||||||| | ||| ||| |  |||||||||||||||  |||||   ||| ||||||||||||| |||| | |||||| ||    
T  15845188 tctaacaaaataaaatacaatccagcctcgtaagtactgctccttttgcagttttg--ccctcccgagatcaattttgaccaattcaacgttgaagtaga 15845091  T
Q  642 cgtcatgtgtgtaatttttttt 663  Q
    |  |  ||||||||||| ||||    
T  15845090 caccgcgtgtgtaatttatttt 15845069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 910 - 1012
Target Start/End: Complemental strand, 41743328 - 41743227
Alignment:
Q  910 tcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaatccaagtcccacatcagata 1008  Q
    ||||||||||| || |||||||||| || |||||||| ||||  |||||||||||||||| |  | ||||||||||||||   ||||| |||||| ||||    
T  41743328 tcgaattcaagggtgatctacctattcaagcaccaagtccaa--agagtgttgggcgtgatgtggatgtattgggaaaaacttaagtctcacatcggata 41743231  T
Q  1009 gata 1012  Q
    ||||    
T  41743230 gata 41743227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 588 - 664
Target Start/End: Original strand, 47742329 - 47742405
Alignment:
Q  588 ttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaatttttttta 664  Q
    |||||||||||||| ||||||||| ||||| ||||||||||| |||||  |||||| ||  |||||| || ||||||    
T  47742329 ttttgcagttttggcccctcagacaaatttcgaccaagtcaaagctgacttggacgccacttgtgtatttattttta 47742405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 888 - 952
Target Start/End: Complemental strand, 53386278 - 53386214
Alignment:
Q  888 tctaacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaa 952  Q
    |||||||||||||||||| |||| ||||||||| |||| || | ||| ||||||||||| |||||    
T  53386278 tctaacatggtatcagagcttgttgaattcaagggtcacctgcatattcacgcaccaagcccaaa 53386214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 954 - 1013
Target Start/End: Complemental strand, 53559441 - 53559381
Alignment:
Q  954 agagtgttgggcgtgaggagt-tgtattgggaaaaatccaagtcccacatcagatagataa 1013  Q
    |||||| ||||||||||| |  |||||||||||||| |||||||||||||| |||||||||    
T  53559441 agagtgctgggcgtgaggggggtgtattgggaaaaaaccaagtcccacatcggatagataa 53559381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 726 - 806
Target Start/End: Complemental strand, 3369927 - 3369845
Alignment:
Q  726 gggctgtattgtattttattttgccagggg--caaaatcgcaactttctgatatttaggagggcaaaactgctattaagcctt 806  Q
    |||||| ||||||||||||||||  |||||  ||||||||||||||  ||||| ||||| ||  ||||||| |||||||||||    
T  3369927 gggctgaattgtattttattttgttagggggccaaaatcgcaacttcttgatacttagggggcaaaaactgatattaagcctt 3369845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 977 - 1036
Target Start/End: Complemental strand, 28497326 - 28497267
Alignment:
Q  977 tattgggaaaaatccaagtcccacatcagatagataacaccgatgataatagtttataaa 1036  Q
    |||||||||||| |||||||||||||| ||||||||| ||   |||||| ||||||||||    
T  28497326 tattgggaaaaacccaagtcccacatcggatagataagactcttgataagagtttataaa 28497267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 546 - 661
Target Start/End: Complemental strand, 48188351 - 48188238
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtc 645  Q
    |||||||||||||||||||| ||||||||||| ||| | || ||||||| |||||| ||| |  ||||||||||||||| | |  ||||| | ||| | |    
T  48188351 ctaacaaaataaaatacaattcagccccttaagtactg-ccattttgcatttttgg-ccccctaaccaattttgaccaatttatcgctgacgaggatgcc 48188254  T
Q  646 atgtgtgtaatttttt 661  Q
    | ||||||||||||||    
T  48188253 acgtgtgtaatttttt 48188238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 977 - 1012
Target Start/End: Original strand, 55100090 - 55100125
Alignment:
Q  977 tattgggaaaaatccaagtcccacatcagatagata 1012  Q
    |||||||||||||||||||||||||| |||||||||    
T  55100090 tattgggaaaaatccaagtcccacattagatagata 55100125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 894 - 955
Target Start/End: Original strand, 3640320 - 3640382
Alignment:
Q  894 atggtatcagagt-ttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagag 955  Q
    ||||||||||||  |||||||||||||| | || ||||| |||||||||||||| ||||||||    
T  3640320 atggtatcagagccttgtcgaattcaagggccacctaccgatccacgcaccaagcccaaagag 3640382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 976 - 1034
Target Start/End: Complemental strand, 8560084 - 8560026
Alignment:
Q  976 gtattgggaaaaatccaagtcccacatcagatagataacaccgatgataatagtttata 1034  Q
    |||||||||||| ||||||||||||||| ||||||||| ||   |||||| ||||||||    
T  8560084 gtattgggaaaagtccaagtcccacatcggatagataagactcttgataagagtttata 8560026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 588 - 654
Target Start/End: Original strand, 30064098 - 30064163
Alignment:
Q  588 ttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgta 654  Q
    |||||||||||||| ||||| | ||||||||||||||||||||||  |  ||||||||| |||||||    
T  30064098 ttttgcagttttgg-ccctctggccaattttgaccaagtcaatgcacacatggacgtcacgtgtgta 30064163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 726 - 805
Target Start/End: Original strand, 30627007 - 30627088
Alignment:
Q  726 gggctgtattgtattttattttgccagggg--caaaatcgcaactttctgatatttaggagggcaaaactgctattaagcct 805  Q
    |||||| ||||||||||||||||  | |||  |||||||| |||||| ||||| ||||| ||  ||||||||||||||||||    
T  30627007 gggctgaattgtattttattttgttatggggtcaaaatcgtaactttttgatacttagggggtgaaaactgctattaagcct 30627088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 588 - 654
Target Start/End: Original strand, 33508983 - 33509049
Alignment:
Q  588 ttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgta 654  Q
    |||||||||||||| ||| ||||  ||||||||||||||||||||  | ||||||| || |||||||    
T  33508983 ttttgcagttttggccccccagataaattttgaccaagtcaatgcacacgtggacgccacgtgtgta 33509049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 493 - 577
Target Start/End: Original strand, 3369847 - 3369932
Alignment:
Q  493 ggcttaatagcagtttt-gtcccctgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaa 577  Q
    ||||||||| ||||||| | ||||| || || | |||||| ||||||| ||   |||||||||||||||||||| |||||||||||    
T  3369847 ggcttaatatcagtttttgccccctaagtatcaagaagttgcgattttggccccctaacaaaataaaatacaattcagccccttaa 3369932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 891 - 967
Target Start/End: Complemental strand, 10390467 - 10390394
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgt 967  Q
    ||||||||||||||| |||||||||||||| | || ||||| || |||||||||||  |||  ||||||||||||||    
T  10390467 aacatggtatcagagcttgtcgaattcaag-ggcacctacccattcacgcaccaagctcaa--agagtgttgggcgt 10390394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 974 - 1011
Target Start/End: Complemental strand, 17077259 - 17077222
Alignment:
Q  974 ttgtattgggaaaaatccaagtcccacatcagatagat 1011  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  17077259 ttgtattgggaaaaacccaagtcccacatcggatagat 17077222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 4e-38; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 891 - 1036
Target Start/End: Original strand, 33855597 - 33855742
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatc 990  Q
    |||||||||||||||||||||||||||||  | || |||||||||||||||||||| | ||| |||||| |||| |||||| | |||||||||||||| |    
T  33855597 aacatggtatcagagtttgtcgaattcaaagggcacctacctatccacgcaccaagtctaaaaagagtgatgggtgtgagggggtgtattgggaaaaacc 33855696  T
Q  991 caagtcccacatcagatagataacaccgatgataatagtttataaa 1036  Q
    ||||||||||||| ||||||||| ||  ||||||||||||||||||    
T  33855697 caagtcccacatcggatagataagactcatgataatagtttataaa 33855742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 546 - 663
Target Start/End: Original strand, 35828403 - 35828520
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtc 645  Q
    ||||||||| |||||||||| ||||||| ||| ||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||    
T  35828403 ctaacaaaacaaaatacaattcagccccctaagtaccgccccttttgcagttttggcccctcagaccaattttcaccaagtcaatgctgacgtggacgtc 35828502  T
Q  646 atgtgtgtaatttttttt 663  Q
    |  |||||||||||||||    
T  35828503 acatgtgtaatttttttt 35828520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 493 - 659
Target Start/End: Complemental strand, 15328057 - 15327893
Alignment:
Q  493 ggcttaatagcagtttt-gtcccctgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtccctttt 591  Q
    ||||||| ||||||||| ||||||| || |||||| ||||  ||||||| |   |||||||||||||||||||| ||||||| ||| ||| |||||||||    
T  15328057 ggcttaacagcagttttagtcccctaagtattagggagttgtgattttaaccc-ctaacaaaataaaatacaatacagccccctaagtactgtccctttt 15327959  T
Q  592 gcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaatttt 659  Q
    ||||||||||  ||||||||||||||| | |||||||||||||| ||||||| || ||||||||||||    
T  15327958 gcagttttgg--cctcagaccaattttaatcaagtcaatgctgacgtggacgccacgtgtgtaatttt 15327893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 493 - 663
Target Start/End: Original strand, 24432336 - 24432505
Alignment:
Q  493 ggcttaatagcagttttgtccc-ctgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtccctttt 591  Q
    |||||||||||| ||||| ||| || || || | |||||| ||||||| |||  |||| ||||||||||||| ||||||||| ||| ||| | |||||||    
T  24432336 ggcttaatagcaattttgacccactaagtatcaagaagttgcgattttggctccctaaaaaaataaaatacagtccagccccctaagtactgcccctttt 24432435  T
Q  592 gcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaatttttttt 663  Q
    |||||||||  ||| ||||||||||||||||||||||||||||  ||| ||| |||||||||||||||||||    
T  24432436 gcagttttg--cccccagaccaattttgaccaagtcaatgctggtgtgaacgccatgtgtgtaatttttttt 24432505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 9e-30
Query Start/End: Original strand, 891 - 1013
Target Start/End: Complemental strand, 4258196 - 4258076
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatc 990  Q
    ||||||||||||||| |||||||||||||| | || ||||||||||||| |||||| ||||  |||||||||||||||||| | |||||||||||||| |    
T  4258196 aacatggtatcagagcttgtcgaattcaagggccacctacctatccacgtaccaagcccaa--agagtgttgggcgtgagggggtgtattgggaaaaacc 4258099  T
Q  991 caagtcccacatcagatagataa 1013  Q
    |||||| |||||| |||||||||    
T  4258098 caagtctcacatcggatagataa 4258076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 891 - 1036
Target Start/End: Original strand, 16565006 - 16565149
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatc 990  Q
    ||||||||||||||| || ||||||||||| | || ||||| ||||||| |||||| ||||||||  |||||||||||||| | |||||||||||||| |    
T  16565006 aacatggtatcagagcttatcgaattcaagggccacctaccaatccacggaccaagcccaaagag--tgttgggcgtgagggggtgtattgggaaaaacc 16565103  T
Q  991 caagtcccacatcagatagataacaccgatgataatagtttataaa 1036  Q
    ||||||||||||| ||||||||| ||   |||||| ||||||||||    
T  16565104 caagtcccacatcggatagataagactcttgataagagtttataaa 16565149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 891 - 1036
Target Start/End: Complemental strand, 16600656 - 16600513
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatc 990  Q
    ||||||||||||||| || ||||||||||| | || ||||| ||||||| |||||| ||||||||  |||||||||||||| | |||||||||||||| |    
T  16600656 aacatggtatcagagcttatcgaattcaagggccacctaccaatccacggaccaagcccaaagag--tgttgggcgtgagggggtgtattgggaaaaacc 16600559  T
Q  991 caagtcccacatcagatagataacaccgatgataatagtttataaa 1036  Q
    ||||||||||||| ||||||||| ||   |||||| ||||||||||    
T  16600558 caagtcccacatcggatagataagactcttgataagagtttataaa 16600513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 494 - 661
Target Start/End: Complemental strand, 35828724 - 35828556
Alignment:
Q  494 gcttaatagcagttttgtcccc-tgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttttg 592  Q
    ||||||||| ||||||| |||| | || |||| ||| ||| ||||||  | | |||| ||||||||||||||||||||||||||| |||   ||||||||    
T  35828724 gcttaatagtagttttgaccccataagtattatgaaattatgatttttacctcctaataaaataaaatacaatccagccccttaagtactaccccttttg 35828625  T
Q  593 cagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaatttttt 661  Q
    || |||||| |||  || |||||||| | |||||||||||||| |||||||||||||||||||||||||    
T  35828624 catttttggccccctaggccaatttttatcaagtcaatgctgacgtggacgtcatgtgtgtaatttttt 35828556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 483 - 659
Target Start/End: Original strand, 35793365 - 35793542
Alignment:
Q  483 ttaaaatattggcttaatagcagttttgtcccc-tgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattac 581  Q
    ||||||| |||||||||||||||||||| |||| | |   |||||||||| |||||||||    |||||||||||||||||||| ||||||||||| |||    
T  35793365 ttaaaattttggcttaatagcagttttggccccctaaattttaggaagttgcgattttaggcccctaacaaaataaaatacaattcagccccttaagtac 35793464  T
Q  582 cgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaatttt 659  Q
     |||||||||||| |||||| |||  | |||||||||||  ||  ||| |||||  ||||||||| ||||||||||||    
T  35793465 tgtcccttttgcaattttggcccccaaaaccaattttgaaaaatccaacgctgacatggacgtcacgtgtgtaatttt 35793542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 891 - 1011
Target Start/End: Complemental strand, 6751702 - 6751583
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaat 989  Q
    ||||||||||||||| |||||||||||||| |||| |||||||| ||||||||||| ||||  |||||| ||||||||| || | ||||||||||||||     
T  6751702 aacatggtatcagagcttgtcgaattcaagggtcacctacctattcacgcaccaagcccaa--agagtgctgggcgtgaggggggtgtattgggaaaaac 6751605  T
Q  990 ccaagtcccacatcagatagat 1011  Q
    |||||||||| ||| |||||||    
T  6751604 ccaagtcccaaatcggatagat 6751583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 868 - 1013
Target Start/End: Original strand, 6782920 - 6783066
Alignment:
Q  868 tgttaggtttaaccacgatttctaacatggtatcagagtttgtcgaattcaagagtcatct--acctatccacgcaccaagaccaaagagagtgttgggc 965  Q
    ||||||| | |||||||||||||||||||||||||||| |||||||||||||| | |  ||  |||||| ||||||||||| ||||  |||||| |||||    
T  6782920 tgttaggctcaaccacgatttctaacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaa--agagtgctgggc 6783017  T
Q  966 gtga-ggagttgtattgggaaaaatccaagtcccacatcagatagataa 1013  Q
    |||| || | |||||||||||||| ||||||| |||||| |||||||||    
T  6783018 gtgaggggggtgtattgggaaaaacccaagtctcacatcggatagataa 6783066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 893 - 1036
Target Start/End: Original strand, 48113907 - 48114048
Alignment:
Q  893 catggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaatcc 991  Q
    ||||||||||||| |||||||||||||| | || |||||||||||||| ||||| |||||   |||||||||||||| || | ||||||||||| || ||    
T  48113907 catggtatcagagcttgtcgaattcaagggacacctacctatccacgcgccaagcccaaa---agtgttgggcgtgaggggggtgtattgggaataaccc 48114003  T
Q  992 aagtcccacatcagatagataacaccgatgataatagtttataaa 1036  Q
    |||||||||||| ||||||||| ||   |||||| ||||||||||    
T  48114004 aagtcccacatcggatagataagactcttgataagagtttataaa 48114048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 891 - 1013
Target Start/End: Original strand, 23396721 - 23396842
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaa 988  Q
    ||||||||||||||| |||||||||||||| | |  |||  ||||| ||||||||||| ||||||||  |||||||||||||| | ||||||||| ||||    
T  23396721 aacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag--tgttgggcgtgagggggtgtattggg-aaaa 23396817  T
Q  989 tccaagtcccacatcagatagataa 1013  Q
    ||||||||||||| || ||||||||    
T  23396818 tccaagtcccacaacatatagataa 23396842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 894 - 1003
Target Start/End: Original strand, 43366318 - 43366425
Alignment:
Q  894 atggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatccaa 993  Q
    |||||||||||  |||||||||||||| |||| ||| |||| ||||||||||  |||  |||||||||||||||||||   |||||||||||||||||||    
T  43366318 atggtatcagaccttgtcgaattcaagtgtcacctaactattcacgcaccaaatcca--gagagtgttgggcgtgagggagtgtattgggaaaaatccaa 43366415  T
Q  994 gtcccacatc 1003  Q
     |||||||||    
T  43366416 atcccacatc 43366425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 891 - 997
Target Start/End: Original strand, 258541 - 258646
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaat 989  Q
    ||||||||||||||| |||||||||||||| | || ||||| || ||||||||||| ||||  |||||||||||||||| || | ||||||||||||||     
T  258541 aacatggtatcagagcttgtcgaattcaagggccacctaccgattcacgcaccaagcccaa--agagtgttgggcgtgacgggggtgtattgggaaaaac 258638  T
Q  990 ccaagtcc 997  Q
    ||||||||    
T  258639 ccaagtcc 258646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 892 - 988
Target Start/End: Complemental strand, 23821526 - 23821432
Alignment:
Q  892 acatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaa 988  Q
    ||||||||| ||||||||||||||||||| || | |||||||| ||||||||||| ||||  |||||| ||||||||||| | |||||||| |||||    
T  23821526 acatggtattagagtttgtcgaattcaagggttacctacctattcacgcaccaagcccaa--agagtgatgggcgtgagggggtgtattggaaaaaa 23821432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 726 - 806
Target Start/End: Complemental strand, 35828429 - 35828347
Alignment:
Q  726 gggctgtattgtattttattttgccagggg--caaaatcgcaactttctgatatttaggagggcaaaactgctattaagcctt 806  Q
    |||||| |||||||||| |||||  ||| |  ||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  35828429 gggctgaattgtattttgttttgttaggaggtcaaaatcgcaactttctgatatttaagaggtcaaaactgctattaagcctt 35828347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 521 - 662
Target Start/End: Complemental strand, 43657880 - 43657742
Alignment:
Q  521 attaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttga 620  Q
    ||||||||||| ||||||| ||   |||||||||||||||||||| |||| | |||| ||    ||||||||||||||||| ||   | | |||||||||    
T  43657880 attaggaagttgcgattttggcaccctaacaaaataaaatacaattcagctctttaagtatttccccttttgcagttttggccc---aaatcaattttga 43657784  T
Q  621 ccaagtcaatgctgaagtggacgtcatgtgtgtaattttttt 662  Q
    || |||||||||||| ||||||| ||  ||||||||||||||    
T  43657783 ccgagtcaatgctgacgtggacgccacatgtgtaattttttt 43657742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 891 - 1011
Target Start/End: Complemental strand, 6813275 - 6813156
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtg-aggagttgtattgggaaaaat 989  Q
    ||||||||||||||| |||||||||||||| | || |||| ||| ||||||||||| ||||  |||||| ||||| || ||| | ||| ||||||||||     
T  6813275 aacatggtatcagagcttgtcgaattcaagggccacctacatattcacgcaccaagcccaa--agagtgctgggcatgaagggggtgtgttgggaaaaac 6813178  T
Q  990 ccaagtcccacatcagatagat 1011  Q
     ||||||||||||| |||||||    
T  6813177 acaagtcccacatcggatagat 6813156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 891 - 1011
Target Start/End: Complemental strand, 23821668 - 23821549
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgagg-agttgtattgggaaaaat 989  Q
    |||||||||| | || ||||| |||||||| |||| |||||||| || ||||||||  |||||||  || ||||||||||| || ||||||||||||||     
T  23821668 aacatggtataatagcttgtcaaattcaagggtcacctacctattcatgcaccaagctcaaagag--tgctgggcgtgagggaggtgtattgggaaaaac 23821571  T
Q  990 ccaagtcccacatcagatagat 1011  Q
    |||||||||||||  |||||||    
T  23821570 ccaagtcccacataggatagat 23821549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 496 - 633
Target Start/End: Complemental strand, 24432705 - 24432569
Alignment:
Q  496 ttaatagcagttttgtcccctgagg-attaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttttgca 594  Q
    ||||||||||||||| ||||| | | ||||||| ||| ||||||| |||  ||||||||||||||||||||| |||||||| | ||  | ||||||||||    
T  24432705 ttaatagcagttttggccccttaagtattagga-gttgcgattttggctcactaacaaaataaaatacaatctagccccttgaatagtgccccttttgca 24432607  T
Q  595 gttttggtccctcagaccaattttgaccaagtcaatgct 633  Q
    ||||||| ||  ||| | |||||||||||| ||||||||    
T  24432606 gttttgg-cctccaggctaattttgaccaaatcaatgct 24432569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 587 - 664
Target Start/End: Original strand, 282570 - 282646
Alignment:
Q  587 cttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaatttttttta 664  Q
    |||||||| |||||| |||  || ||||||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  282570 cttttgcacttttggccccctaggccaattttgaccaagtcaatgctgatgtgg-cgccatgtgtgtaatttttttta 282646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 547 - 664
Target Start/End: Original strand, 9477188 - 9477305
Alignment:
Q  547 taacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtca 646  Q
    ||||||||||||||||||  | |||| |||| ||  | ||||||||||||||||| | | |||| ||||||||||||||||||  |||| |||| ||  |    
T  9477188 taacaaaataaaatacaaaactgccctttaagtattgccccttttgcagttttggcctcccagatcaattttgaccaagtcaaatctgacgtgggcgcta 9477287  T
Q  647 tgtgtgtaatttttttta 664  Q
     |||||||||||||||||    
T  9477288 cgtgtgtaatttttttta 9477305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 891 - 1013
Target Start/End: Original strand, 9378905 - 9379028
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaaaa 987  Q
    ||||||||||||||| |||||||||||||| | |  |||  ||||| ||||||||||| ||||||||  || ||| ||||||| |  |||||||||||||    
T  9378905 aacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag--tgctggacgtgaggggagtgtattgggaaaa 9379002  T
Q  988 atccaagtcccacatcagatagataa 1013  Q
    | |||||| ||||||| |||||||||    
T  9379003 acccaagttccacatcggatagataa 9379028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 891 - 971
Target Start/End: Original strand, 8681996 - 8682075
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgc-accaagaccaaagagagtgttgggcgtgagg 971  Q
    ||||||||||||||| |||||||||||||| | |||| |||||| ||||| ||||||| |||  ||||||||||||||||||    
T  8681996 aacatggtatcagagcttgtcgaattcaagggccatcaacctattcacgcaaccaagatcaa--agagtgttgggcgtgagg 8682075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 726 - 804
Target Start/End: Complemental strand, 35793455 - 35793375
Alignment:
Q  726 gggctgtattgtattttattttgccaggggc--aaaatcgcaactttctgatatttaggagggcaaaactgctattaagcc 804  Q
    |||||| ||||||||||||||||  ||||||  ||||||||||||| || | ||||||| || ||||||||||||||||||    
T  35793455 gggctgaattgtattttattttgttaggggcctaaaatcgcaacttcctaaaatttagggggccaaaactgctattaagcc 35793375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 954 - 1013
Target Start/End: Original strand, 5266327 - 5266387
Alignment:
Q  954 agagtgttgggcgtga-ggagttgtattgggaaaaatccaagtcccacatcagatagataa 1013  Q
    |||||||||||||||| || | |||||||||||||| ||| ||||||||||||||||||||    
T  5266327 agagtgttgggcgtgatgggggtgtattgggaaaaacccatgtcccacatcagatagataa 5266387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 588 - 632
Target Start/End: Complemental strand, 43078020 - 43077976
Alignment:
Q  588 ttttgcagttttggtccctcagaccaattttgaccaagtcaatgc 632  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||    
T  43078020 ttttgcagttttggccccccagaccaattttgaccaagtcaatgc 43077976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 588 - 632
Target Start/End: Complemental strand, 43091998 - 43091954
Alignment:
Q  588 ttttgcagttttggtccctcagaccaattttgaccaagtcaatgc 632  Q
    |||||||||||||||| | ||||||||||||||||||||||||||    
T  43091998 ttttgcagttttggtcacccagaccaattttgaccaagtcaatgc 43091954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 547 - 661
Target Start/End: Original strand, 47030330 - 47030441
Alignment:
Q  547 taacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtca 646  Q
    ||||||||||||||||||| || |||  ||| ||| |   ||||||||||||||  ||   |||||||||||||||||||||||||||| |||| || ||    
T  47030330 taacaaaataaaatacaatacaaccctctaagtactgcttcttttgcagttttgaccc---agaccaattttgaccaagtcaatgctgacgtggccgcca 47030426  T
Q  647 tgtgtgtaatttttt 661  Q
      |||||||||||||    
T  47030427 catgtgtaatttttt 47030441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 546 - 657
Target Start/End: Complemental strand, 9477450 - 9477340
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtc 645  Q
    |||||||||||||||||||    ||||||||| ||  | || ||||||| |||||| ||| ||||||||||||||||||||||||||  | ||||||| |    
T  9477450 ctaacaaaataaaatacaaaatcgccccttaagtattgcccattttgcaattttggcccc-cagaccaattttgaccaagtcaatgcacatgtggacgcc 9477352  T
Q  646 atgtgtgtaatt 657  Q
    | ||||| ||||    
T  9477351 acgtgtgaaatt 9477340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 495 - 601
Target Start/End: Original strand, 27756267 - 27756374
Alignment:
Q  495 cttaatagcagttttgtcccctgagg-attaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttttgc 593  Q
    |||||||||||||||| ||||| | | |||||| |||| ||||||| ||   |||||||||||||||||||||||||| | ||| ||| | || | ||||    
T  27756267 cttaatagcagttttggccccttaagtattaggtagttgcgattttggccccctaacaaaataaaatacaatccagcctcctaagtactgcccttcttgc 27756366  T
Q  594 agttttgg 601  Q
    ||||||||    
T  27756367 agttttgg 27756374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 975 - 1034
Target Start/End: Original strand, 33834145 - 33834204
Alignment:
Q  975 tgtattgggaaaaatccaagtcccacatcagatagataacaccgatgataatagtttata 1034  Q
    |||||||||||||||||| |||||||||||||||||||| ||   |||||| ||||||||    
T  33834145 tgtattgggaaaaatccatgtcccacatcagatagataagactcttgataagagtttata 33834204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 589 - 662
Target Start/End: Complemental strand, 282818 - 282746
Alignment:
Q  589 tttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaattttttt 662  Q
    |||||| ||||||||||  || |||||||||||||||||||||| || |||| || || |||||||||||||||    
T  282818 tttgcacttttggtcccctaggccaattttgaccaagtcaatgccgacgtgg-cgccacgtgtgtaattttttt 282746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 954 - 1034
Target Start/End: Original strand, 23390558 - 23390639
Alignment:
Q  954 agagtgttgggcgtga-ggagttgtattgggaaaaatccaagtcccacatcagatagataacaccgatgataatagtttata 1034  Q
    |||||||||||||||| || | |||||||||||||| ||| |||||||||| ||||||||| ||   |||||| ||||||||    
T  23390558 agagtgttgggcgtgacgggggtgtattgggaaaaacccatgtcccacatcggatagataagactcttgataagagtttata 23390639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 984 - 1036
Target Start/End: Original strand, 8681883 - 8681935
Alignment:
Q  984 aaaaatccaagtcccacatcagatagataacaccgatgataatagtttataaa 1036  Q
    |||||||||||||||||||||||||||||| ||   |||||| ||||||||||    
T  8681883 aaaaatccaagtcccacatcagatagataagactcttgataagagtttataaa 8681935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 727 - 812
Target Start/End: Complemental strand, 27756344 - 27756257
Alignment:
Q  727 ggctgtattgtattttattttgccagggg--caaaatcgcaactttctgatatttaggagggcaaaactgctattaagccttaaatat 812  Q
    ||||| ||||||||||||||||  |||||  |||||||||||||  || ||| ||| | || |||||||||||||||| |||||||||    
T  27756344 ggctggattgtattttattttgttagggggccaaaatcgcaactacctaatacttaaggggccaaaactgctattaagtcttaaatat 27756257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 929 - 1003
Target Start/End: Complemental strand, 40703811 - 40703738
Alignment:
Q  929 acctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaatccaagtcccacatc 1003  Q
    |||||| ||||||||||| ||||||||  ||||||| |||| |||| ||||||| |||||| ||||||||||||||    
T  40703811 acctattcacgcaccaagcccaaagag--tgttgggtgtgacggaggtgtattgagaaaaaaccaagtcccacatc 40703738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 612 - 663
Target Start/End: Complemental strand, 9143255 - 9143204
Alignment:
Q  612 caattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaatttttttt 663  Q
    |||||||||||||||||| ||||| ||||||| ||  |||||||||||||||    
T  9143255 caattttgaccaagtcaaagctgatgtggacgccacttgtgtaatttttttt 9143204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 977 - 1036
Target Start/End: Original strand, 33855473 - 33855532
Alignment:
Q  977 tattgggaaaaatccaagtcccacatcagatagataacaccgatgataatagtttataaa 1036  Q
    |||||||||||| |||||||||| ||| ||||||||| ||   |||||||||||||||||    
T  33855473 tattgggaaaaacccaagtcccatatcggatagataagactcgtgataatagtttataaa 33855532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 890 - 971
Target Start/End: Original strand, 6329653 - 6329732
Alignment:
Q  890 taacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgagg 971  Q
    ||||||||||||| |  |||||||||||||||| || |||| ||||||| ||||||| ||  || |||||||| ||||||||    
T  6329653 taacatggtatcaaaacttgtcgaattcaagagccacctacatatccacacaccaagccc--agggagtgttgagcgtgagg 6329732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 588 - 640
Target Start/End: Complemental strand, 44565565 - 44565516
Alignment:
Q  588 ttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtgg 640  Q
    |||||||||||||||||   || ||||||||||||||||||||||||| ||||    
T  44565565 ttttgcagttttggtcc---aggccaattttgaccaagtcaatgctgatgtgg 44565516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 756 - 805
Target Start/End: Original strand, 21939340 - 21939389
Alignment:
Q  756 caaaatcgcaactttctgatatttaggagggcaaaactgctattaagcct 805  Q
    ||||||||||||||  ||||| ||||| || |||||||||||||||||||    
T  21939340 caaaatcgcaacttcgtgatacttagggggccaaaactgctattaagcct 21939389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 977 - 1034
Target Start/End: Complemental strand, 35866751 - 35866694
Alignment:
Q  977 tattgggaaaaatccaagtcccacatcagatagataacaccgatgataatagtttata 1034  Q
    |||||||||||| |||||||||||||| ||||||||| ||   |||||| ||||||||    
T  35866751 tattgggaaaaacccaagtcccacatcggatagataagactcttgataagagtttata 35866694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 587 - 640
Target Start/End: Complemental strand, 47030595 - 47030542
Alignment:
Q  587 cttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtgg 640  Q
    |||||||| ||||||||||| ||  |||||||||| ||||||||||||| ||||    
T  47030595 cttttgcaattttggtccctaaggtcaattttgacaaagtcaatgctgatgtgg 47030542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 6e-34; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 546 - 668
Target Start/End: Complemental strand, 33687974 - 33687852
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtc 645  Q
    |||||||||||||||||||| ||||||| ||| ||| | | ||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||| |    
T  33687974 ctaacaaaataaaatacaattcagccccctaagtactgcctcttttgcagttttggtcccccagaccaattttgaccaaatcaatgctgacgtggacgcc 33687875  T
Q  646 atgtgtgtaattttttttaatta 668  Q
    |  ||||||||||||||||||||    
T  33687874 acatgtgtaattttttttaatta 33687852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 527 - 661
Target Start/End: Original strand, 33687639 - 33687773
Alignment:
Q  527 aagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagt 626  Q
    ||||| ||||||||||   |||||||||||||||||||||||||||| ||| ||||| |||| |||||||||||||||| |||| |||||||||||||||    
T  33687639 aagttgcgattttagccccctaacaaaataaaatacaatccagccccctaagtaccgcccctattgcagttttggtcccccagatcaattttgaccaagt 33687738  T
Q  627 caatgctgaagtggacgtcatgtgtgtaatttttt 661  Q
    ||||| ||| ||| ||| ||  |||||||||||||    
T  33687739 caatgttgacgtgaacgccacatgtgtaatttttt 33687773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 546 - 668
Target Start/End: Complemental strand, 16883794 - 16883672
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtc 645  Q
    |||||||| ||||||||||||||||||| ||| ||| |  |||||||||||||||| | |  ||| ||||||||||||||||||| |||| |||| || |    
T  16883794 ctaacaaattaaaatacaatccagccccctaagtactgctccttttgcagttttggcctccgagatcaattttgaccaagtcaatcctgacgtggccgcc 16883695  T
Q  646 atgtgtgtaattttttttaatta 668  Q
    | |||||||||||||||||||||    
T  16883694 acgtgtgtaattttttttaatta 16883672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 891 - 1010
Target Start/End: Complemental strand, 39956666 - 39956546
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaaaa 987  Q
    ||||||||||||||| |||||||||||||| | || |||  ||||| ||||||||||| ||||||||  || ||||||||||| |  |||||||||||||    
T  39956666 aacatggtatcagagcttgtcgaattcaagggccacctaaacctattcacgcaccaagcccaaagag--tgctgggcgtgaggggggtgtattgggaaaa 39956569  T
Q  988 atccaagtcccacatcagataga 1010  Q
    |||||||||||||||||||||||    
T  39956568 atccaagtcccacatcagataga 39956546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 887 - 1036
Target Start/End: Original strand, 35015388 - 35015536
Alignment:
Q  887 ttctaacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaa 985  Q
    ||||||||||||||||||| |||||||||||||| | || ||||| || |||| |||| | ||||||||  || ||||||||||| |  |||||||||||    
T  35015388 ttctaacatggtatcagagcttgtcgaattcaagggccacctaccgattcacgtaccaggcccaaagag--tgctgggcgtgaggggggtgtattgggaa 35015485  T
Q  986 aaatccaagtcccacatcagatagataacaccgatgataatagtttataaa 1036  Q
    ||| |||||||||||||| ||||||||| ||   |||||| ||||||||||    
T  35015486 aaagccaagtcccacatcggatagataaaactcttgataaaagtttataaa 35015536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 891 - 1002
Target Start/End: Original strand, 35011769 - 35011881
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaat 989  Q
    ||||||||||||||| |||||||||||||| |  | |||||||||||||||||||| ||||  |||| | ||||||||| || | ||||||||||||||     
T  35011769 aacatggtatcagagcttgtcgaattcaagggctacctacctatccacgcaccaagtccaagaagagagctgggcgtgaggggggtgtattgggaaaaac 35011868  T
Q  990 ccaagtcccacat 1002  Q
    |||||||||||||    
T  35011869 ccaagtcccacat 35011881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 890 - 1013
Target Start/End: Complemental strand, 35358657 - 35358529
Alignment:
Q  890 taacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagag--agtgttgggcgtgagg-agttgtattggga 984  Q
    |||||||||||||||| |||||||||||||| | |  |||  ||||| ||| ||||||| ||| ||||  |||| ||||||||||| || ||||||||||    
T  35358657 taacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacacaccaagcccagagagtgagtgctgggcgtgagggagatgtattggga 35358558  T
Q  985 aaaatccaagtcccacatcagatagataa 1013  Q
    |||||||||||| ||||||||||||||||    
T  35358557 aaaatccaagtctcacatcagatagataa 35358529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 891 - 1010
Target Start/End: Complemental strand, 9264492 - 9264372
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaaaa 987  Q
    ||||||||||||||| |||||||||||||| | || |||  ||||| ||||||||||| |||||||   || ||||||||||| |  |||||||||||||    
T  9264492 aacatggtatcagagcttgtcgaattcaagggccacctaaacctattcacgcaccaagcccaaagac--tgctgggcgtgaggggggtgtattgggaaaa 9264395  T
Q  988 atccaagtcccacatcagataga 1010  Q
    |||||||||||||||| ||||||    
T  9264394 atccaagtcccacatcggataga 9264372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 878 - 1002
Target Start/End: Original strand, 21833417 - 21833541
Alignment:
Q  878 aaccacgatttctaacatggtatcagagtttgtcgaattcaagagtcatct--acctatccacgcaccaagaccaaagagagtgttgggcgtgaggagtt 975  Q
    |||||||||||||||||||||||||||| |||||||||| ||| | |  ||  |||||| |||| |||||| ||||  |||||||||| ||||||| | |    
T  21833417 aaccacgatttctaacatggtatcagagcttgtcgaattaaagggccgcctaaacctattcacgaaccaagtccaa--agagtgttggtcgtgagggggt 21833514  T
Q  976 gtattgggaaaaatccaagtcccacat 1002  Q
    |||||| |||||| |||||||||||||    
T  21833515 gtattgagaaaaacccaagtcccacat 21833541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 891 - 1013
Target Start/End: Complemental strand, 9264285 - 9264162
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaaaa 987  Q
    ||||||||||||||| |||||||||||||| | |  |||  ||||| ||||||||||| ||||||||  || ||||||||||| |  |||||||||||||    
T  9264285 aacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag--tgctgggcgtgaggggggtgtattgggaaaa 9264188  T
Q  988 atccaagtcccacatcagatagataa 1013  Q
    | |||||||||||||| |||||||||    
T  9264187 acccaagtcccacatcggatagataa 9264162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 891 - 1008
Target Start/End: Complemental strand, 33909824 - 33909709
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatc 990  Q
    |||||||||| |||| |||||||||||||| | || |||||||| | || |||||| ||||||||  ||||||| |||||| | || ||||  |||||||    
T  33909824 aacatggtattagagcttgtcgaattcaagggccacctacctattcgcgtaccaagcccaaagag--tgttgggtgtgagggggtgcattgaaaaaaatc 33909727  T
Q  991 caagtcccacatcagata 1008  Q
    ||||||||||||||||||    
T  33909726 caagtcccacatcagata 33909709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 547 - 668
Target Start/End: Original strand, 33381565 - 33381685
Alignment:
Q  547 taacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtca 646  Q
    ||||||||||||||||||| |||| || ||| ||  | || |||| ||||||||| |||||||  ||||||| | |||||||||||||| ||||||| ||    
T  33381565 taacaaaataaaatacaattcagctccctaagtattgcccattttacagttttgg-ccctcaggtcaattttaatcaagtcaatgctgacgtggacggca 33381663  T
Q  647 tgtgtgtaattttttttaatta 668  Q
      ||||||||||||||||||||    
T  33381664 catgtgtaattttttttaatta 33381685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 545 - 657
Target Start/End: Original strand, 16883544 - 16883656
Alignment:
Q  545 tctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgt 644  Q
    ||||||||||||||||| ||| ||||||  ||  ||| | |||||||| |||||||| |||  | ||||||||||||||||||| |||||| |||| |||    
T  16883544 tctaacaaaataaaatataattcagccctctatctactgccccttttgtagttttggccccctaaaccaattttgaccaagtcattgctgacgtggccgt 16883643  T
Q  645 catgtgtgtaatt 657  Q
    || ||||||||||    
T  16883644 cacgtgtgtaatt 16883656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 891 - 1010
Target Start/End: Complemental strand, 22407640 - 22407520
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgagg-agttgtattgggaaaa 987  Q
    ||||||||||||||| |||||||||||||| | |  |||  ||||| |||||||||||  |||||||  || ||||||||||| || |||||||||||||    
T  22407640 aacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagctcaaagag--tgctgggcgtgagggaggtgtattgggaaaa 22407543  T
Q  988 atccaagtcccacatcagataga 1010  Q
    ||| |||||||||||| ||||||    
T  22407542 atctaagtcccacatcggataga 22407520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 891 - 1012
Target Start/End: Original strand, 12799789 - 12799907
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatc 990  Q
    ||||||||||||||| |||||||||||||| ||||||||| |||  |||||||||| ||||||||  |||||| | ||| | ||  |||||| |||||      
T  12799789 aacatggtatcagagcttgtcgaattcaagggtcatctacttatttacgcaccaagcccaaagag--tgttggacatgaagggta-tattggaaaaaact 12799885  T
Q  991 caagtcccacatcagatagata 1012  Q
    ||||||||||||| ||||||||    
T  12799886 caagtcccacatcggatagata 12799907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 891 - 1011
Target Start/End: Complemental strand, 40230631 - 40230512
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaat 989  Q
    |||||||||||| || |||||||||||| | | || |||||||| ||||||||||| ||||  |||||| ||||||| | || | ||||||||||||||     
T  40230631 aacatggtatcaaagcttgtcgaattcaggggccacctacctattcacgcaccaagcccaa--agagtgatgggcgttaggggggtgtattgggaaaaac 40230534  T
Q  990 ccaagtcccacatcagatagat 1011  Q
    |||||| ||||||| |||||||    
T  40230533 ccaagttccacatcggatagat 40230512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 929 - 1013
Target Start/End: Original strand, 42258855 - 42258938
Alignment:
Q  929 acctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaatccaagtcccacatcagatagataa 1013  Q
    |||||| ||||||||||| ||||||||  || ||||||||| || | ||||||||||||||||||||||||||||| |||||||||    
T  42258855 acctattcacgcaccaagcccaaagag--tgctgggcgtgatgggggtgtattgggaaaaatccaagtcccacatcggatagataa 42258938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 499 - 635
Target Start/End: Original strand, 3354755 - 3354892
Alignment:
Q  499 atagcagttttgtcccc-tgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagtt 597  Q
    |||||||||||| |||| | || || ||||| || ||||||| || | |||| ||||||||||||||||||||||||||| ||  | |  |||||| | |    
T  3354755 atagcagttttggccccctaagtatcaggaaattgcgattttggcctcctaagaaaataaaatacaatccagccccttaagtattgccaattttgctgct 3354854  T
Q  598 ttggtccctcagaccaattttgaccaagtcaatgctga 635  Q
    |||  ||| ||| |||||||||||||||||||||||||    
T  3354855 ttgcccccccaggccaattttgaccaagtcaatgctga 3354892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 545 - 664
Target Start/End: Original strand, 12921500 - 12921617
Alignment:
Q  545 tctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgt 644  Q
    ||||||||||||||||| |||  | | |||||| ||||| |||||||||||||||||  ||   | ||||||||| ||||||||| ||||| ||| |||     
T  12921500 tctaacaaaataaaataaaatttatctccttaagtaccgccccttttgcagttttggctccg--ggccaattttgtccaagtcaacgctgatgtgaacgc 12921597  T
Q  645 catgtgtgtaatttttttta 664  Q
    || |||||||||||||||||    
T  12921598 cacgtgtgtaatttttttta 12921617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 863 - 955
Target Start/End: Original strand, 39269385 - 39269477
Alignment:
Q  863 gattttgttaggtttaaccacgatttctaacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagag 955  Q
    |||| |||||||  |||| ||||||| ||| ||||||||||||| ||||||||||||| | || ||||| || ||||||||||| ||||||||    
T  39269385 gattgtgttaggcctaactacgatttttaagatggtatcagagtctgtcgaattcaagggccacctaccgattcacgcaccaagcccaaagag 39269477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 546 - 668
Target Start/End: Complemental strand, 43902826 - 43902708
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtc 645  Q
    ||||||||||||||||||||| |||||| ||| ||  ||| ||| | || ||||||  || ||| ||||||||||| ||||||||||| | ||||||| |    
T  43902826 ctaacaaaataaaatacaatctagccccctaagtattgtcacttatacaattttgg--ccccaggccaattttgacaaagtcaatgctaacgtggacgcc 43902729  T
Q  646 atgtgtgtaattttttttaatta 668  Q
      |||||||||||||||||||||    
T  43902728 --gtgtgtaattttttttaatta 43902708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 894 - 1013
Target Start/End: Complemental strand, 53640161 - 53640041
Alignment:
Q  894 atggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaatc 990  Q
    |||||||||||| |||||||||||||| | |  |||  ||||| ||||||||||| |||  ||||||| | || |||| || ||||||||||||||||||    
T  53640161 atggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagccca--gagagtgctaggtgtgatggggttgtattgggaaaaatc 53640064  T
Q  991 caagtcccacatcagatagataa 1013  Q
    ||||||||| ||| |||||||||    
T  53640063 caagtcccatatcggatagataa 53640041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 607 - 666
Target Start/End: Complemental strand, 12921689 - 12921630
Alignment:
Q  607 cagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaattttttttaat 666  Q
    ||||||||||||||||||||||| ||||| ||||||| ||  ||||||||||||||||||    
T  12921689 cagaccaattttgaccaagtcaacgctgacgtggacgacacatgtgtaattttttttaat 12921630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 547 - 662
Target Start/End: Complemental strand, 15313598 - 15313483
Alignment:
Q  547 taacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtca 646  Q
    ||||||||||||||||||| ||  | ||||| ||| | | ||||||||||||||| | |  ||||||||||||||||| |||| | | |||| |||| ||    
T  15313598 taacaaaataaaatacaattcaagctcttaagtactgactcttttgcagttttggcctcctagaccaattttgaccaattcaacgttaaagtagacgcca 15313499  T
Q  647 tgtgtgtaattttttt 662  Q
     |||||||||||||||    
T  15313498 cgtgtgtaattttttt 15313483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 493 - 635
Target Start/End: Original strand, 43902532 - 43902672
Alignment:
Q  493 ggcttaatagcagttttgtcccctgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttttg 592  Q
    ||||||||||||||||   ||| | || |||||||||||  |||||| ||    |||||||||||||||||||| | |||| ||| ||  | ||||||||    
T  43902532 ggcttaatagcagtttgaccccttaagtattaggaagttgtgattttggccccttaacaaaataaaatacaatctaaccccctaagtattgccccttttg 43902631  T
Q  593 cagttttggtccctcagaccaattttgaccaagtcaatgctga 635  Q
    ||||||||  |||  ||||||||||||| ||||||||||||||    
T  43902632 cagttttg--ccccgagaccaattttgatcaagtcaatgctga 43902672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 546 - 662
Target Start/End: Original strand, 45333674 - 45333787
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtc 645  Q
    |||||||||||||||||||| ||| ||  ||| ||   | |||||||||||||||| ||   || |||||||||||||||||||||||||  ||| || |    
T  45333674 ctaacaaaataaaatacaattcagtcctctaagtatttttccttttgcagttttggccc---aggccaattttgaccaagtcaatgctgacatggccgcc 45333770  T
Q  646 atgtgtgtaattttttt 662  Q
    ||||||||| |||||||    
T  45333771 atgtgtgtagttttttt 45333787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 890 - 1011
Target Start/End: Complemental strand, 46412231 - 46412112
Alignment:
Q  890 taacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaat 989  Q
    ||||||||||||| || ||||||||||||||   |  |||||||| ||| ||||||| |||||||   || ||||||||||| | |||||||||||||||    
T  46412231 taacatggtatcaaagattgtcgaattcaaggaccgcctacctattcacacaccaagcccaaagaa--tgatgggcgtgagggggtgtattgggaaaaat 46412134  T
Q  990 ccaagtcccacatcagatagat 1011  Q
     || |||||| ||| |||||||    
T  46412133 tcatgtcccatatcggatagat 46412112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 891 - 1013
Target Start/End: Original strand, 27177524 - 27177645
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaat 989  Q
    ||||||||||||||| |||||||| ||||| | || ||| |||| || |||||||| ||||  ||| |||||||||||| || | |||||||| |||||     
T  27177524 aacatggtatcagagcttgtcgaaatcaagggccacctagctattcatgcaccaagcccaa--agaatgttgggcgtgaggggggtgtattggaaaaaac 27177621  T
Q  990 ccaagtcccacatcagatagataa 1013  Q
     |||||| ||||| ||||||||||    
T  27177622 tcaagtctcacatgagatagataa 27177645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 588 - 667
Target Start/End: Original strand, 53255058 - 53255138
Alignment:
Q  588 ttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaatt-ttttttaatt 667  Q
    ||||||||||||||  |||||| ||||||||||||||||||| ||||| ||||||| ||  |||||| || ||||||||||    
T  53255058 ttttgcagttttggctcctcaggccaattttgaccaagtcaaagctgacgtggacgccacatgtgtatttattttttaatt 53255138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 588 - 663
Target Start/End: Complemental strand, 1807392 - 1807317
Alignment:
Q  588 ttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaatttttttt 663  Q
    ||||||||| ||| |||| | | ||||||||||||||||||| ||||| ||||||| |  ||||||||||||||||    
T  1807392 ttttgcagtattgatcccccgggccaattttgaccaagtcaaagctgacgtggacgccgcgtgtgtaatttttttt 1807317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 894 - 952
Target Start/End: Original strand, 12799985 - 12800044
Alignment:
Q  894 atggtatcagagtttgtcgaattcaagagtcat-ctacctatccacgcaccaagaccaaa 952  Q
    ||||||||| ||||||||||||||||| ||||| |||||||| ||||||||||| |||||    
T  12799985 atggtatcaaagtttgtcgaattcaagggtcatcctacctattcacgcaccaagtccaaa 12800044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 891 - 1013
Target Start/End: Original strand, 49477439 - 49477562
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaaaa 987  Q
    |||||| ||||| || |||||||||||||| | |  |||  ||||| ||||||||||| ||||||||  || ||||||||||| |  ||| |||||||||    
T  49477439 aacatgatatcaaagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag--tgctgggcgtgaggggggtgtgttgggaaaa 49477536  T
Q  988 atccaagtcccacatcagatagataa 1013  Q
    | |||||||||||||| |||||||||    
T  49477537 acccaagtcccacatcggatagataa 49477562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 727 - 803
Target Start/End: Original strand, 49579147 - 49579225
Alignment:
Q  727 ggctgtattgtattttattttgccaggggc--aaaatcgcaactttctgatatttaggagggcaaaactgctattaagc 803  Q
    ||||| ||||||||||||||||  |||||   |||||||||||||||||||| ||| | || |||||||||||||||||    
T  49579147 ggctgaattgtattttattttgttaggggactaaaatcgcaactttctgatacttaaggggtcaaaactgctattaagc 49579225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 726 - 805
Target Start/End: Original strand, 3354919 - 3355000
Alignment:
Q  726 gggctgtattgtattttattttgccagggg--caaaatcgcaactttctgatatttaggagggcaaaactgctattaagcct 805  Q
    |||||| ||||||||||||||||  |||||  ||||||||||||||  ||||| ||||| || |||| ||||||||||||||    
T  3354919 gggctggattgtattttattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 3355000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 586 - 632
Target Start/End: Original strand, 11413339 - 11413384
Alignment:
Q  586 ccttttgcagttttggtccctcagaccaattttgaccaagtcaatgc 632  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||    
T  11413339 ccttttgcagttttgg-ccctcagatcaattttgaccaagtcaatgc 11413384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 726 - 805
Target Start/End: Original strand, 16883768 - 16883849
Alignment:
Q  726 gggctgtattgtattttattttgccagggg--caaaatcgcaactttctgatatttaggagggcaaaactgctattaagcct 805  Q
    |||||| ||||||||||| ||||  |||||  ||||||||||||||||||||| ||||| || ||||| | |||||||||||    
T  16883768 gggctggattgtattttaatttgttagggggtcaaaatcgcaactttctgatacttagggggccaaaaatactattaagcct 16883849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 891 - 1036
Target Start/End: Complemental strand, 44145316 - 44145174
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatc 990  Q
    ||||||||||||||| | ||| |||||||| | || ||||||||||||| |||||| ||||  |||||| ||   |||| |   ||||||||| |||| |    
T  44145316 aacatggtatcagagctagtcaaattcaagggccacctacctatccacgtaccaagcccaa--agagtgctgaatgtgaagtagtgtattggggaaaa-c 44145220  T
Q  991 caagtcccacatcagatagataacaccgatgataatagtttataaa 1036  Q
      ||||||||||||||||||||| ||   |||||||||||||||||    
T  44145219 tcagtcccacatcagatagataagactcttgataatagtttataaa 44145174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 726 - 804
Target Start/End: Original strand, 33687948 - 33688028
Alignment:
Q  726 gggctgtattgtattttattttgccagggg--caaaatcgcaactttctgatatttaggagggcaaaactgctattaagcc 804  Q
    |||||| ||||||||||||||||  |||||  || |||||||||||||||||| ||||   | ||||||||||||||||||    
T  33687948 gggctgaattgtattttattttgttagggggtcagaatcgcaactttctgatacttagagagccaaaactgctattaagcc 33688028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 929 - 1036
Target Start/End: Original strand, 50692471 - 50692577
Alignment:
Q  929 acctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaaaaatccaagtcccacatcagatagataacaccgatgataata 1027  Q
    |||||| ||||||||| | ||||||||  || ||||||||||| |  |||||||||||||| |||||||||||||| |||||| || ||   |||||| |    
T  50692471 acctattcacgcaccaggcccaaagag--tgctgggcgtgaggggggtgtattgggaaaaacccaagtcccacatcggatagacaagactcttgataaga 50692568  T
Q  1028 gtttataaa 1036  Q
    |||||||||    
T  50692569 gtttataaa 50692577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 583 - 661
Target Start/End: Original strand, 1807170 - 1807247
Alignment:
Q  583 gtcccttttgcagttttggtccctc-agaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaatttttt 661  Q
    ||||||||||||||||| |  |||| |||||||||||||||||||||||||  | ||||||| ||  |||||||||||||    
T  1807170 gtcccttttgcagttttag--cctcgagaccaattttgaccaagtcaatgcacacgtggacgccacatgtgtaatttttt 1807247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 894 - 1013
Target Start/End: Original strand, 26927021 - 26927140
Alignment:
Q  894 atggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgagga-gttgtattgggaaaaatcca 992  Q
    ||||||||||||  ||||| ||||||| |||| ||||| || ||||||||||  || || | |||||||||||||| || | ||||||||||||||  |     
T  26927021 atggtatcagagcctgtcggattcaagggtcacctaccgattcacgcaccaaagcccaa-atagtgttgggcgtgacgagggtgtattgggaaaaactct 26927119  T
Q  993 agtcccacatcagatagataa 1013  Q
     ||||||||||| ||||||||    
T  26927120 tgtcccacatcatatagataa 26927140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 493 - 643
Target Start/End: Complemental strand, 50420935 - 50420786
Alignment:
Q  493 ggcttaatagcagttttgtcc-cctgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtccctttt 591  Q
    |||||||||||||||||| || ||| || |||| |||||| |||||||  |    ||||||||||||| |||||| |||||  ||| ||  | || ||||    
T  50420935 ggcttaatagcagttttggcctcctaagtattatgaagttgcgattttgaccccttaacaaaataaaacacaatctagccctctaagtattgcccatttt 50420836  T
Q  592 gcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacg 643  Q
    |||||||||| |||  ||  ||||||||||||| |||||||||| |||||||    
T  50420835 gcagttttggcccc--aggtcaattttgaccaaatcaatgctgacgtggacg 50420786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 977 - 1013
Target Start/End: Complemental strand, 51338553 - 51338517
Alignment:
Q  977 tattgggaaaaatccaagtcccacatcagatagataa 1013  Q
    |||||||||||| ||||||||||||||||||||||||    
T  51338553 tattgggaaaaacccaagtcccacatcagatagataa 51338517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 977 - 1013
Target Start/End: Complemental strand, 53640284 - 53640248
Alignment:
Q  977 tattgggaaaaatccaagtcccacatcagatagataa 1013  Q
    |||||||||||| ||||||||||||||||||||||||    
T  53640284 tattgggaaaaacccaagtcccacatcagatagataa 53640248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 977 - 1013
Target Start/End: Original strand, 54495523 - 54495559
Alignment:
Q  977 tattgggaaaaatccaagtcccacatcagatagataa 1013  Q
    ||||||||||||||||||||||||||| |||||||||    
T  54495523 tattgggaaaaatccaagtcccacatcggatagataa 54495559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 891 - 969
Target Start/End: Original strand, 20737132 - 20737208
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga 969  Q
    |||||||||||||||  |||||| |||||| | || ||||| || ||||||||||| ||||  ||||||||||||||||    
T  20737132 aacatggtatcagagcctgtcgatttcaagggccacctaccgattcacgcaccaagcccaa--agagtgttgggcgtga 20737208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 891 - 955
Target Start/End: Original strand, 37223687 - 37223753
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatct--acctatccacgcaccaagaccaaagag 955  Q
    ||||||||||||||| |||||||||||||| | || ||  |||||| ||||||||||| ||||||||    
T  37223687 aacatggtatcagagcttgtcgaattcaagggccacctaaacctattcacgcaccaagcccaaagag 37223753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 722 - 806
Target Start/End: Original strand, 50420851 - 50420937
Alignment:
Q  722 tagagggctgtattgtattttattttgccagggg--caaaatcgcaactttctgatatttaggagggcaaaactgctattaagcctt 806  Q
    |||||||||  ||||| ||||||||||  | |||  ||||||||||||||  | ||| |||||||| ||||||||||||||||||||    
T  50420851 tagagggctagattgtgttttattttgttaaggggtcaaaatcgcaacttcataatacttaggaggccaaaactgctattaagcctt 50420937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 975 - 1010
Target Start/End: Complemental strand, 54591579 - 54591544
Alignment:
Q  975 tgtattgggaaaaatccaagtcccacatcagataga 1010  Q
    ||||||||||||||||||||||||||||| ||||||    
T  54591579 tgtattgggaaaaatccaagtcccacatcggataga 54591544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 975 - 1013
Target Start/End: Original strand, 29369791 - 29369829
Alignment:
Q  975 tgtattgggaaaaatccaagtcccacatcagatagataa 1013  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  29369791 tgtattgggaaaaacccaagtcccacatcggatagataa 29369829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 894 - 1013
Target Start/End: Original strand, 32034205 - 32034324
Alignment:
Q  894 atggtatcagagtttgtcgaattcaagagtcatctacctatccacgcacc-aagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaatcc 991  Q
    |||||||||||| ||||||| |||||| | || ||||| || |||||||| ||| ||||  |||||| ||||||||| || | |||||| ||||||| |     
T  32034205 atggtatcagagcttgtcgatttcaagggccacctaccgattcacgcaccgaagcccaa--agagtgctgggcgtgacgggggtgtattaggaaaaacct 32034302  T
Q  992 aagtcccacatcagatagataa 1013  Q
    | |||||||||| |||||||||    
T  32034303 atgtcccacatcggatagataa 32034324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 726 - 797
Target Start/End: Complemental strand, 33687684 - 33687611
Alignment:
Q  726 gggctgtattgtattttattttgccaggggc--aaaatcgcaactttctgatatttaggagggcaaaactgcta 797  Q
    |||||| ||||||||||||||||  |||||   |||||||||||||||||||| ||||| || ||||| |||||    
T  33687684 gggctggattgtattttattttgttagggggctaaaatcgcaactttctgatacttagggggccaaaaatgcta 33687611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 976 - 1010
Target Start/End: Complemental strand, 37058884 - 37058850
Alignment:
Q  976 gtattgggaaaaatccaagtcccacatcagataga 1010  Q
    ||||||||||||| |||||||||||||||||||||    
T  37058884 gtattgggaaaaacccaagtcccacatcagataga 37058850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 868 - 905
Target Start/End: Complemental strand, 8142672 - 8142635
Alignment:
Q  868 tgttaggtttaaccacgatttctaacatggtatcagag 905  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  8142672 tgttaggtctaaccacgatttctaagatggtatcagag 8142635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 977 - 1010
Target Start/End: Original strand, 22339733 - 22339766
Alignment:
Q  977 tattgggaaaaatccaagtcccacatcagataga 1010  Q
    ||||||||||||||||||||||||||| ||||||    
T  22339733 tattgggaaaaatccaagtcccacatcggataga 22339766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 977 - 1010
Target Start/End: Complemental strand, 22407760 - 22407727
Alignment:
Q  977 tattgggaaaaatccaagtcccacatcagataga 1010  Q
    ||||||||||||||||||||||||||| ||||||    
T  22407760 tattgggaaaaatccaagtcccacatcggataga 22407727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 894 - 955
Target Start/End: Complemental strand, 25578920 - 25578859
Alignment:
Q  894 atggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagag 955  Q
    ||||||||||| | ||||||||||||| |||| ||||| || ||||||| ||| ||||||||    
T  25578920 atggtatcagattctgtcgaattcaagggtcacctaccgattcacgcactaagcccaaagag 25578859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 894 - 955
Target Start/End: Original strand, 40926895 - 40926956
Alignment:
Q  894 atggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagag 955  Q
    ||||||||||||  |||||| |||||| | || ||||| |||||||||||||| ||||||||    
T  40926895 atggtatcagagcctgtcgatttcaagggccacctaccgatccacgcaccaagcccaaagag 40926956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 973 - 1034
Target Start/End: Original strand, 40927018 - 40927079
Alignment:
Q  973 gttgtattgggaaaaatccaagtcccacatcagatagataacaccgatgataatagtttata 1034  Q
    ||||||| |||||||||||| |||||||||| ||||||||| ||   |||||| ||||||||    
T  40927018 gttgtatcgggaaaaatccatgtcccacatcggatagataagactcttgataagagtttata 40927079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 2e-33; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 546 - 663
Target Start/End: Complemental strand, 22408806 - 22408690
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtc 645  Q
    |||||||||||||||||||||||| ||| | | ||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||| | ||||||| |    
T  22408806 ctaacaaaataaaatacaatccagtccccttagtactgtcccttttgcagttttggcccc-cagaccaattttgaccaagtcaatgctaacgtggacgac 22408708  T
Q  646 atgtgtgtaatttttttt 663  Q
    ||||||||||||||||||    
T  22408707 atgtgtgtaatttttttt 22408690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 891 - 1036
Target Start/End: Original strand, 39268134 - 39268277
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatc 990  Q
    ||||||||||||||| |||| ||||||||| | || ||||| |||||||||||||  ||||||||  || ||||||||||| | |||||||||||||| |    
T  39268134 aacatggtatcagagcttgttgaattcaagggccacctaccaatccacgcaccaatcccaaagag--tgctgggcgtgagggggtgtattgggaaaaacc 39268231  T
Q  991 caagtcccacatcagatagataacaccgatgataatagtttataaa 1036  Q
    ||||||||||||| ||||||||| ||   |||||| ||||||||||    
T  39268232 caagtcccacatcggatagataaaactcttgataagagtttataaa 39268277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 891 - 1011
Target Start/End: Complemental strand, 3015613 - 3015495
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatc 990  Q
    ||||||||||||||| |||||||||||||| | || |||||||| ||||||||||| ||||  |||||| ||||||||||| | |||||||||||||| |    
T  3015613 aacatggtatcagagcttgtcgaattcaagggccacctacctattcacgcaccaagcccaa--agagtgatgggcgtgagggggtgtattgggaaaaacc 3015516  T
Q  991 caagtcccacatcagatagat 1011  Q
    |||| |||||||| |||||||    
T  3015515 caagccccacatcggatagat 3015495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 891 - 1013
Target Start/End: Complemental strand, 18107674 - 18107554
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatc 990  Q
    |||||||||||| || ||||||||||||||   || |||||||||||||||||||| ||||  ||||||||  |||||| | | |||||||||||||| |    
T  18107674 aacatggtatcaaagcttgtcgaattcaaggaccacctacctatccacgcaccaagcccaa--agagtgtttagcgtgacggggtgtattgggaaaaacc 18107577  T
Q  991 caagtcccacatcagatagataa 1013  Q
    ||||||||||||| |||||||||    
T  18107576 caagtcccacatcggatagataa 18107554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 886 - 1010
Target Start/End: Original strand, 11632332 - 11632456
Alignment:
Q  886 tttctaacatggtatcagagtttgtcgaattcaagagtcatctac--ctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattggg 983  Q
    |||| ||||||||||||||| |||||||||||||| | |  |||   |||| ||||||||||| ||||||||  |||||||||||||| | ||||||||     
T  11632332 tttccaacatggtatcagagcttgtcgaattcaagggccgcctaaatctattcacgcaccaagtccaaagag--tgttgggcgtgagggggtgtattgga 11632429  T
Q  984 aaaaatccaagtcccacatcagataga 1010  Q
    |||||||||||||||||||| ||||||    
T  11632430 aaaaatccaagtcccacatcggataga 11632456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 891 - 1003
Target Start/End: Original strand, 18107739 - 18107851
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatc 990  Q
    ||||| ||||||||| ||||||||||||||   || |||||||||||||||||||| ||||| | || | ||||||||||  | |||||||||||||| |    
T  18107739 aacattgtatcagagcttgtcgaattcaaggaccacctacctatccacgcaccaagcccaaaaatagagatgggcgtgagagggtgtattgggaaaaacc 18107838  T
Q  991 caagtcccacatc 1003  Q
    ||| |||||||||    
T  18107839 caattcccacatc 18107851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 547 - 662
Target Start/End: Complemental strand, 12167123 - 12167010
Alignment:
Q  547 taacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtca 646  Q
    |||||||||||||||||||||||| || ||| ||| | | |||||| |||||||| |||| |||||||||||||||||||||||||| |  || ||||||    
T  12167123 taacaaaataaaatacaatccagcaccctaagtactgcctcttttgtagttttgg-ccct-agaccaattttgaccaagtcaatgctaacatgaacgtca 12167026  T
Q  647 tgtgtgtaattttttt 662  Q
     |||| ||||||||||    
T  12167025 cgtgtataattttttt 12167010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 891 - 1036
Target Start/End: Complemental strand, 2908761 - 2908615
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgag-gagttgtattgggaaaa 987  Q
    ||||||||||||||| |||||||||||||| |||| |||  ||||| ||| |||||||  |||||||  || |||||||||| | | |||||||||||||    
T  2908761 aacatggtatcagagcttgtcgaattcaagggtcacctaaacctattcacacaccaagctcaaagag--tgctgggcgtgagaggggtgtattgggaaaa 2908664  T
Q  988 atccaagtcccacatcagatagataacaccgatgataatagtttataaa 1036  Q
    | |||||||||||||| |||||| || ||   ||| |||||||||||||    
T  2908663 acccaagtcccacatcggatagacaagactcttgagaatagtttataaa 2908615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 897 - 1010
Target Start/End: Complemental strand, 15510696 - 15510583
Alignment:
Q  897 gtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaatccaagt 995  Q
    ||||||||| |||||||||||||| |||  |||||||| ||||||||||| || || |||||| ||||||||| |||| |||||| ||| |||||| |||    
T  15510696 gtatcagagcttgtcgaattcaagggtcgcctacctattcacgcaccaagccccaa-agagtgctgggcgtgagggaggtgtattaggagaaatccgagt 15510598  T
Q  996 cccacatcagataga 1010  Q
    |||||||| ||||||    
T  15510597 cccacatcggataga 15510583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 891 - 1012
Target Start/End: Complemental strand, 36307915 - 36307797
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatc 990  Q
    ||||||||||||||| |||||||||||||| | |||||||||||  || ||||||| ||||  |||||| ||||||||||| | || |||||| ||||||    
T  36307915 aacatggtatcagagcttgtcgaattcaagggccatctacctattaacacaccaagcccaa--agagtgctgggcgtgagggggtgcattggg-aaaatc 36307819  T
Q  991 caagtcccacatcagatagata 1012  Q
    |  ||||||||| |||||||||    
T  36307818 cgggtcccacattagatagata 36307797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 891 - 1010
Target Start/End: Complemental strand, 48303 - 48183
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaaaa 987  Q
    ||||||||||||||| |||||||||||||| | |  |||  ||||| ||||||||||| ||||||||  || ||||||||||| |  |||||||||||||    
T  48303 aacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag--tgctgggcgtgaggggggtgtattgggaaaa 48206  T
Q  988 atccaagtcccacatcagataga 1010  Q
    | |||||||||||||| ||||||    
T  48205 acccaagtcccacatcggataga 48183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 526 - 663
Target Start/End: Original strand, 33087614 - 33087747
Alignment:
Q  526 gaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaag 625  Q
    |||||| |||||||  | ||||||||||||||||    |||||||| | ||  ||| | ||||||||||||||||| ||| | || |||||||||| |||    
T  33087614 gaagttgcgattttgaccttctaacaaaataaaa----atccagcctcctagatactgccccttttgcagttttggccccccggatcaattttgacaaag 33087709  T
Q  626 tcaatgctgaagtggacgtcatgtgtgtaatttttttt 663  Q
    |||||||| | ||||||| || ||||||||||||||||    
T  33087710 tcaatgctaacgtggacgccacgtgtgtaatttttttt 33087747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 891 - 1010
Target Start/End: Original strand, 34457208 - 34457328
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaaaa 987  Q
    ||||||||||||||| |||||||||||||| | |  |||  ||||| ||||||||||| ||||||||  || ||||||||||| |  |||||||||||||    
T  34457208 aacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag--tgatgggcgtgaggggggtgtattgggaaaa 34457305  T
Q  988 atccaagtcccacatcagataga 1010  Q
    | |||||||||||||| ||||||    
T  34457306 acccaagtcccacatcggataga 34457328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 2427087 - 2427142
Alignment:
Q  607 cagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaattttttt 662  Q
    ||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  2427087 cagactaattttgactaagtcaatgctgatgtggacgtcatgtgtgtaattttttt 2427142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 588 - 663
Target Start/End: Complemental strand, 6464293 - 6464218
Alignment:
Q  588 ttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaatttttttt 663  Q
    |||||||||||||| ||||||| ||||||||||||||||||| ||||| ||||||| || ||||||| || |||||    
T  6464293 ttttgcagttttggcccctcaggccaattttgaccaagtcaaagctgacgtggacgccacgtgtgtatttattttt 6464218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 891 - 1013
Target Start/End: Complemental strand, 43490455 - 43490332
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaaaa 987  Q
    ||||||||||||||| |||| ||||||||| | |  |||  ||||| ||||||||||| ||||||||  || ||||||||||| |  |||||||||||||    
T  43490455 aacatggtatcagagcttgttgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag--tgctgggcgtgaggggggtgtattgggaaaa 43490358  T
Q  988 atccaagtcccacatcagatagataa 1013  Q
    | |||||||||||||| |||||||||    
T  43490357 acccaagtcccacatcggatagataa 43490332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 546 - 643
Target Start/End: Complemental strand, 36628686 - 36628588
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttg-cagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacg 643  Q
    |||| ||||||||||| |||| |||||||||| ||  |||||||||  || ||||| ||||||||| ||||||||| |||||||||||||| |||||||    
T  36628686 ctaataaaataaaatataatctagccccttaagtattgtcccttttttcaattttgatccctcagagcaattttgatcaagtcaatgctgatgtggacg 36628588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 585 - 658
Target Start/End: Complemental strand, 37426676 - 37426605
Alignment:
Q  585 cccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaattt 658  Q
    ||||||||||||||||| |||  | |||||||||||| ||||||||||||| ||||||| ||||||||||||||    
T  37426676 cccttttgcagttttggcccc--ataccaattttgacaaagtcaatgctgacgtggacgccatgtgtgtaattt 37426605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 546 - 631
Target Start/End: Original strand, 12166859 - 12166944
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatg 631  Q
    ||||||||||||||||||||||||| || | | ||| | | ||||||||||||| | ||||||  |||||||||||||||||||||    
T  12166859 ctaacaaaataaaatacaatccagctccctgagtactgcctcttttgcagtttttgcccctcaagccaattttgaccaagtcaatg 12166944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 548 - 668
Target Start/End: Original strand, 22408528 - 22408652
Alignment:
Q  548 aacaaaataaaatacaatccag-----ccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggac 642  Q
    ||||||||||||||||||||||     ||| |||| ||| ||| ||||||||||||||| ||| || |  ||||||||| ||||||||||||| |||||     
T  22408528 aacaaaataaaatacaatccagtccaacccattaagtactgtctcttttgcagttttggcccc-caaattaattttgacaaagtcaatgctgacgtggat 22408626  T
Q  643 gtcatgtgtgtaattttttttaatta 668  Q
    | ||  ||||||||||||||||||||    
T  22408627 gccacatgtgtaattttttttaatta 22408652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 588 - 632
Target Start/End: Complemental strand, 20126635 - 20126591
Alignment:
Q  588 ttttgcagttttggtccctcagaccaattttgaccaagtcaatgc 632  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  20126635 ttttgcagttttggcccctcagaccaattttgaccaagtcaatgc 20126591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 927 - 1013
Target Start/End: Original strand, 3763044 - 3763128
Alignment:
Q  927 ctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatccaagtcccacatcagatagataa 1013  Q
    ||||| || ||||||||||| ||||||||  || ||||||||| ||| |||||||||||||| ||| |||||||||| |||||||||    
T  3763044 ctaccgattcacgcaccaagcccaaagag--tgatgggcgtgacgaggtgtattgggaaaaacccatgtcccacatcggatagataa 3763128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 733 - 802
Target Start/End: Original strand, 37426695 - 37426765
Alignment:
Q  733 attgtattttattttgccaggggc-aaaatcgcaactttctgatatttaggagggcaaaactgctattaag 802  Q
    ||||||||||||||||  |||||| ||||| |||||||||||||| ||||| || ||||||||||||||||    
T  37426695 attgtattttattttgttaggggctaaaattgcaactttctgatacttagggggccaaaactgctattaag 37426765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 976 - 1036
Target Start/End: Complemental strand, 2908882 - 2908822
Alignment:
Q  976 gtattgggaaaaatccaagtcccacatcagatagataacaccgatgataatagtttataaa 1036  Q
    ||||||||||||||||||||||||||||||||||| || ||   ||| |||||||||||||    
T  2908882 gtattgggaaaaatccaagtcccacatcagatagacaagacttttgagaatagtttataaa 2908822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 546 - 661
Target Start/End: Original strand, 20987000 - 20987113
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtc 645  Q
    |||||||||| ||||||||| ||||||| ||| ||| |    |||||||||||||   ||  |||||||||||||| |||||||||||||  ||||||||    
T  20987000 ctaacaaaattaaatacaattcagccccctaagtactggttattttgcagttttgactcc--agaccaattttgactaagtcaatgctgacatggacgtc 20987097  T
Q  646 atgtgtgtaatttttt 661  Q
    |  |||||||||||||    
T  20987098 acatgtgtaatttttt 20987113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 878 - 1013
Target Start/End: Complemental strand, 37782065 - 37781920
Alignment:
Q  878 aaccacgatttctaacatggtatcagagtttgtcgaattcaagagtcatct--acctatccacgcaccaagaccaaagag-------agtgttgggcgtg 968  Q
    |||||| || |||||||||||||||||| |||||||||||||| | |  ||  |||||| ||||||||||| ||||||||       |||||||||||||    
T  37782065 aaccaccatgtctaacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagagtccaaacagtgttgggcgtg 37781966  T
Q  969 a-ggagttgtattgggaaaaatccaagtcccacatcagatagataa 1013  Q
    | || | | ||||||||||||  |||||| |||||| |||||||||    
T  37781965 aggggggtatattgggaaaaactcaagtctcacatcggatagataa 37781920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 929 - 1003
Target Start/End: Original strand, 28156185 - 28156257
Alignment:
Q  929 acctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatccaagtcccacatc 1003  Q
    |||||| ||||||||||| ||||||||  || ||||| ||||| | |||||||||||||| ||||||||||||||    
T  28156185 acctattcacgcaccaagcccaaagag--tgctgggcatgagggggtgtattgggaaaaacccaagtcccacatc 28156257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 878 - 1013
Target Start/End: Complemental strand, 37656952 - 37656808
Alignment:
Q  878 aaccacgatttctaacatggtatcagagtttgtcgaattcaagagtcatct--acctatccacgcaccaagaccaaagag-------agtgttgggcgtg 968  Q
    |||||| || |||||||||||||||||| |||||||||||||| | |  ||  ||||||  |||||||||| ||| ||||       |||||||||||||    
T  37656952 aaccaccatgtctaacatggtatcagagcttgtcgaattcaagggccgcctaaacctatttacgcaccaagcccagagagtccaaacagtgttgggcgtg 37656853  T
Q  969 aggagttgtattgggaaaaatccaagtcccacatcagatagataa 1013  Q
    ||| | |||||||| |||||  |||||| |||||| |||||||||    
T  37656852 agggggtgtattggaaaaaactcaagtctcacatcggatagataa 37656808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 585 - 668
Target Start/End: Original strand, 42169178 - 42169261
Alignment:
Q  585 cccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaattttttttaatta 668  Q
    ||||||||||||||||| ||| || |||||| ||||||||||||  | |||  ||||| ||| ||||||| |||||||||||||    
T  42169178 cccttttgcagttttggccccccaaaccaatgttgaccaagtcagagttgacatggacatcacgtgtgtatttttttttaatta 42169261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 929 - 1013
Target Start/End: Original strand, 13413735 - 13413818
Alignment:
Q  929 acctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaaaaatccaagtcccacatcagatagataa 1013  Q
    |||||| ||||||||||| ||||||||  || ||||||| ||| |  |||||||||||||| |||||||||||||| |||||||||    
T  13413735 acctattcacgcaccaagcccaaagag--tgctgggcgtaagggggatgtattgggaaaaacccaagtcccacatcggatagataa 13413818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 546 - 664
Target Start/End: Complemental strand, 20987285 - 20987168
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtc 645  Q
    |||| ||||||||||||||| |||||   ||| ||| | || |||| || |||||| | | |||||||||||||| |||||||||||||| ||| ||  |    
T  20987285 ctaataaaataaaatacaattcagccttataagtacggcccattttacatttttggccac-cagaccaattttgatcaagtcaatgctgatgtgaacacc 20987187  T
Q  646 atgtgtgtaatttttttta 664  Q
    | |||||||||||||||||    
T  20987186 acgtgtgtaatttttttta 20987168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 547 - 601
Target Start/End: Original strand, 37426467 - 37426521
Alignment:
Q  547 taacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttgg 601  Q
    ||||||||||||||||||| |||| |||||| |||||| | ||||||||||||||    
T  37426467 taacaaaataaaatacaattcagctccttaagtaccgtacattttgcagttttgg 37426521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 585 - 630
Target Start/End: Complemental strand, 128499 - 128454
Alignment:
Q  585 cccttttgcagttttggtccctcagaccaattttgaccaagtcaat 630  Q
    |||||||||||||||||| || | ||||||||||||||||||||||    
T  128499 cccttttgcagttttggttccccggaccaattttgaccaagtcaat 128454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 588 - 668
Target Start/End: Complemental strand, 7899678 - 7899597
Alignment:
Q  588 ttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaatt-ttttttaatta 668  Q
    |||||||||||| | | | ||||||||||||||||||||||| |||||  |||||| || ||||||| || |||||||||||    
T  7899678 ttttgcagttttagcctcccagaccaattttgaccaagtcaaagctgacttggacgccacgtgtgtatttattttttaatta 7899597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 756 - 805
Target Start/End: Complemental strand, 20364730 - 20364681
Alignment:
Q  756 caaaatcgcaactttctgatatttaggagggcaaaactgctattaagcct 805  Q
    |||||||||||||| |||||| ||||| || |||||||||||||||||||    
T  20364730 caaaatcgcaacttcctgatacttagggggacaaaactgctattaagcct 20364681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 756 - 805
Target Start/End: Complemental strand, 20369448 - 20369399
Alignment:
Q  756 caaaatcgcaactttctgatatttaggagggcaaaactgctattaagcct 805  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||||    
T  20369448 caaaatcgcaactttctgatacttagcgggacaaaactgctattaagcct 20369399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 868 - 904
Target Start/End: Complemental strand, 11896707 - 11896671
Alignment:
Q  868 tgttaggtttaaccacgatttctaacatggtatcaga 904  Q
    ||||||||||||||||||||||||| |||||||||||    
T  11896707 tgttaggtttaaccacgatttctaatatggtatcaga 11896671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 954 - 1013
Target Start/End: Original strand, 32501182 - 32501239
Alignment:
Q  954 agagtgttgggcgtgaggagttgtattgggaaaaatccaagtcccacatcagatagataa 1013  Q
    ||||||||||| |||||| | |||  |||||||||||||||||||||||| |||||||||    
T  32501182 agagtgttgggtgtgagggggtgt--tgggaaaaatccaagtcccacatcggatagataa 32501239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 546 - 629
Target Start/End: Original strand, 36501454 - 36501534
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaa 629  Q
    |||||||||||||||||||| ||||||| ||| ||| | |||||||||||||||||  || |||  ||||||||||||| ||||    
T  36501454 ctaacaaaataaaatacaat-cagccccctaactactgccccttttgcagttttgg--ccccagtacaattttgaccaattcaa 36501534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 977 - 1037
Target Start/End: Original strand, 36878318 - 36878378
Alignment:
Q  977 tattgggaaaaatccaagtcccacatcagatagataacaccgatgataatagtttataaac 1037  Q
    |||||||||||| | |||||||||||||||||||||| ||   |||||| |||||||||||    
T  36878318 tattgggaaaaaccaaagtcccacatcagatagataagacttttgataagagtttataaac 36878378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 891 - 951
Target Start/End: Original strand, 36878438 - 36878498
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaa 951  Q
    ||||||||||||||| |||||||||||||| | ||  ||||||| ||||||||||| ||||    
T  36878438 aacatggtatcagagcttgtcgaattcaagggccacgtacctattcacgcaccaagcccaa 36878498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 957 - 1012
Target Start/End: Original strand, 395339 - 395394
Alignment:
Q  957 gtgttgggcgtgaggagttgtattgggaaaaatccaagtcccacatcagatagata 1012  Q
    ||||||||| ||||||| |||||||||||| | |||||||||||||  ||||||||    
T  395339 gtgttgggcatgaggaggtgtattgggaaagacccaagtcccacattggatagata 395394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 546 - 629
Target Start/End: Complemental strand, 11168213 - 11168130
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaa 629  Q
    ||||||||||||| |||||  |||||||| || ||  | |||||||||| |||||| ||| ||  |||||||||||||||||||    
T  11168213 ctaacaaaataaattacaactcagcccctgaagtattgccccttttgcaattttggccccccaagccaattttgaccaagtcaa 11168130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 977 - 1036
Target Start/End: Original strand, 39268010 - 39268069
Alignment:
Q  977 tattgggaaaaatccaagtcccacatcagatagataacaccgatgataatagtttataaa 1036  Q
    |||||||||||| |||||||||||||| ||||||||| ||   |||||| ||||||||||    
T  39268010 tattgggaaaaacccaagtcccacatcggatagataagactcttgataagagtttataaa 39268069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 756 - 802
Target Start/End: Complemental strand, 18159760 - 18159714
Alignment:
Q  756 caaaatcgcaactttctgatatttaggagggcaaaactgctattaag 802  Q
    ||||||||||||||||||||| ||| |||| ||||||||| ||||||    
T  18159760 caaaatcgcaactttctgatacttacgaggccaaaactgcaattaag 18159714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 979 - 1013
Target Start/End: Original strand, 30330643 - 30330677
Alignment:
Q  979 ttgggaaaaatccaagtcccacatcagatagataa 1013  Q
    ||||||||||||||||||||||||| |||||||||    
T  30330643 ttgggaaaaatccaagtcccacatcggatagataa 30330677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 878 - 955
Target Start/End: Complemental strand, 8081128 - 8081051
Alignment:
Q  878 aaccacgatttctaacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagag 955  Q
    ||||| ||||||||| ||||||||||||  |||||| |||||| | || ||||| || ||| ||||||| ||||||||    
T  8081128 aaccatgatttctaagatggtatcagagcctgtcgatttcaagggccacctaccgattcacacaccaagcccaaagag 8081051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 550 - 657
Target Start/End: Original strand, 13427859 - 13427964
Alignment:
Q  550 caaaataaaataca-atccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatg 648  Q
    |||||||||||||| | ||| ||||| || || |||||||||||||||||||| |||  |  |||||||||||||| |||||||  | ||||||| || |    
T  13427859 caaaataaaatacataaccatcccct-aagtatcgtcccttttgcagttttggcccc--atgccaattttgaccaactcaatgcacacgtggacgccacg 13427955  T
Q  649 tgtgtaatt 657  Q
    |||||||||    
T  13427956 tgtgtaatt 13427964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 891 - 987
Target Start/End: Original strand, 36882306 - 36882403
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagacc-aaagagagtgttgggcgtgaggagttgtattgggaaaa 987  Q
    ||||||||||||||  || || |||||||| |||| |||  ||||||||||||||| || ||| ||| ||||||||||| || |  ||||||||||||    
T  36882306 aacatggtatcagaacttatcaaattcaagggtcacctatatatccacgcaccaagcccaaaaaagaatgttgggcgtgcgggggggtattgggaaaa 36882403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 625 - 662
Target Start/End: Original strand, 37426528 - 37426565
Alignment:
Q  625 gtcaatgctgaagtggacgtcatgtgtgtaattttttt 662  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  37426528 gtcaatgctgacgtggacgccatgtgtgtaattttttt 37426565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 6e-31; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 6e-31
Query Start/End: Original strand, 891 - 1036
Target Start/End: Original strand, 25998929 - 25999074
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatc 990  Q
    ||||||||||||||| |||| ||||||||  | || |||||||||||||||||||| | |||  ||||| ||||||||||| | |||||||||||||| |    
T  25998929 aacatggtatcagagcttgttgaattcaaagggcacctacctatccacgcaccaagtctaaaaggagtgatgggcgtgagggggtgtattgggaaaaacc 25999028  T
Q  991 caagtcccacatcagatagataacaccgatgataatagtttataaa 1036  Q
    ||||||||||||| ||| ||||| ||  ||||||||||||||||||    
T  25999029 caagtcccacatcggattgataagactcatgataatagtttataaa 25999074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 493 - 662
Target Start/End: Complemental strand, 12101769 - 12101601
Alignment:
Q  493 ggcttaatagcagttttgtcccctgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttttg 592  Q
    |||||||||||||||| ||||| | || || || |||||  |||||| || | |||||||||||||||||||||||||||| ||| ||| | || |||||    
T  12101769 ggcttaatagcagttt-gtcccttaagtatcagaaagttgtgattttggcctcctaacaaaataaaatacaatccagccccctaagtactgccctttttg 12101671  T
Q  593 cagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaattttttt 662  Q
    |||||||||  | | |||| ||||||||||||||||||| ||| ||||||| || |||||||||||||||    
T  12101670 cagttttggctcttaagactaattttgaccaagtcaatgttgatgtggacgccacgtgtgtaattttttt 12101601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 891 - 1036
Target Start/End: Original strand, 26098454 - 26098599
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatc 990  Q
    ||||||||||||||| ||||||| |||||  | || |||||||||||||||||||| | ||| |||||| ||||||||||| | |||||||||||||| |    
T  26098454 aacatggtatcagagcttgtcgagttcaaagggcacctacctatccacgcaccaagtctaaaaagagtgatgggcgtgagggggtgtattgggaaaaacc 26098553  T
Q  991 caagtcccacatcagatagataacaccgatgataatagtttataaa 1036  Q
    |||||||||||||   | ||||| ||  ||||||||||||||||||    
T  26098554 caagtcccacatcgtcttgataagactcatgataatagtttataaa 26098599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 891 - 1036
Target Start/End: Original strand, 26098660 - 26098805
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatc 990  Q
    ||||||||||||||  |||||||||||||  | || |||||||||||||||||||| | ||| |||||| |||| |||||| | |||||||||||||| |    
T  26098660 aacatggtatcagaacttgtcgaattcaaagggcacctacctatccacgcaccaagtctaaaaagagtgatgggtgtgagggggtgtattgggaaaaacc 26098759  T
Q  991 caagtcccacatcagatagataacaccgatgataatagtttataaa 1036  Q
    ||||||| ||||| ||| ||||| ||  ||||||||||||||||||    
T  26098760 caagtcctacatcggattgataagactcatgataatagtttataaa 26098805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 494 - 655
Target Start/End: Complemental strand, 2164770 - 2164610
Alignment:
Q  494 gcttaatagcagttttgtcccc-tgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttttg 592  Q
    ||||||||||||||||| |||| |||| || |||||||| |||||||  |   |||||||||||||||||||||||||||| ||| ||| ||||||||||    
T  2164770 gcttaatagcagttttggccccctgagtatcaggaagttgcgattttgacaccctaacaaaataaaatacaatccagccccctaagtactgtcccttttg 2164671  T
Q  593 cagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaa 655  Q
    ||||||||  ||  ||  ||||||||||||||| ||||||| | ||||||| |||| ||||||    
T  2164670 cagttttgtgcc--catgccaattttgaccaagacaatgctaacgtggacgccatgcgtgtaa 2164610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 494 - 655
Target Start/End: Complemental strand, 2176403 - 2176243
Alignment:
Q  494 gcttaatagcagttttgtcccc-tgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttttg 592  Q
    ||||||||||||||||| |||| |||| || |||||||| |||||||  |   |||||||||||||||||||||||||||| ||| ||| ||||||||||    
T  2176403 gcttaatagcagttttggccccctgagtatcaggaagttgcgattttgacaccctaacaaaataaaatacaatccagccccctaagtactgtcccttttg 2176304  T
Q  593 cagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaa 655  Q
    ||||||||  ||  ||  ||||||||||||||| ||||||| | ||||||| |||| ||||||    
T  2176303 cagttttgtgcc--catgccaattttgaccaagacaatgctaacgtggacgccatgcgtgtaa 2176243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 891 - 1011
Target Start/End: Original strand, 11316955 - 11317074
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaat 989  Q
    ||||||||||||||| |||||||||||||| | || |||||||| ||||||||||| ||||  |||||| ||||||||| || | ||||||||||||||     
T  11316955 aacatggtatcagagcttgtcgaattcaagggccacctacctattcacgcaccaagcccaa--agagtgctgggcgtgaggggggtgtattgggaaaaac 11317052  T
Q  990 ccaagtcccacatcagatagat 1011  Q
    |||||||||||||| |||||||    
T  11317053 ccaagtcccacatcggatagat 11317074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 521 - 640
Target Start/End: Original strand, 1614843 - 1614962
Alignment:
Q  521 attaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttga 620  Q
    ||||||||||| ||||| | || | |||||||||||||||||||||||||||| ||| ||  | || ||||||||||||| |||| ||| || |||||||    
T  1614843 attaggaagttgcgattgtggcctcctaacaaaataaaatacaatccagccccctaaatattgcccattttgcagttttgatcccccaggcccattttga 1614942  T
Q  621 ccaagtcaatgctgaagtgg 640  Q
    ||||||||||||||| ||||    
T  1614943 ccaagtcaatgctgatgtgg 1614962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 891 - 1011
Target Start/End: Original strand, 30526950 - 30527068
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatc 990  Q
    |||||||||||||||||||||||||||||| | || ||| |||| ||||||||||| ||||  |||||||||| ||||||| | |||||||| || ||      
T  30526950 aacatggtatcagagtttgtcgaattcaagggacacctaactattcacgcaccaagcccaa--agagtgttggacgtgagggggtgtattggaaacaact 30527047  T
Q  991 caagtcccacatcagatagat 1011  Q
    ||||||||||||| |||||||    
T  30527048 caagtcccacatcggatagat 30527068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 893 - 971
Target Start/End: Original strand, 2904908 - 2904986
Alignment:
Q  893 catggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgagg 971  Q
    |||||||| |||  |||||||||||||| ||||| |||| |||||||||||||| ||||| ||||||||||||||||||    
T  2904908 catggtattagaacttgtcgaattcaagggtcatttaccaatccacgcaccaagcccaaaaagagtgttgggcgtgagg 2904986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 892 - 1010
Target Start/End: Original strand, 16590088 - 16590209
Alignment:
Q  892 acatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaaaaa 988  Q
    |||||||||||||  |||||||||||||| | |  |||  ||||| || |||||||| ||||| |||||||||||||||||| |  ||||||||||||||    
T  16590088 acatggtatcagaacttgtcgaattcaagggccgcctaaacctattcatgcaccaagcccaaaaagagtgttgggcgtgaggggggtgtattgggaaaaa 16590187  T
Q  989 tccaagtcccacatcagataga 1010  Q
     |||||||||||||| ||||||    
T  16590188 cccaagtcccacatcggataga 16590209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 892 - 1010
Target Start/End: Complemental strand, 16605292 - 16605171
Alignment:
Q  892 acatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaaaaa 988  Q
    |||||||||||||  |||||||||||||| | |  |||  ||||| || |||||||| ||||| |||||||||||||||||| |  ||||||||||||||    
T  16605292 acatggtatcagaacttgtcgaattcaagggccgcctaaacctattcatgcaccaagcccaaaaagagtgttgggcgtgaggggggtgtattgggaaaaa 16605193  T
Q  989 tccaagtcccacatcagataga 1010  Q
     |||||||||||||| ||||||    
T  16605192 cccaagtcccacatcggataga 16605171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 891 - 1035
Target Start/End: Complemental strand, 19712601 - 19712458
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgag-gagttgtattgggaaaaat 989  Q
    ||||||||||||||  |||||||||||||| | || ||||| || ||||||||| | ||||||||  ||||||||||||  | | |||||||||||||||    
T  19712601 aacatggtatcagaacttgtcgaattcaagggccacctaccgattcacgcaccatgcccaaagag--tgttgggcgtgacaggggtgtattgggaaaaat 19712504  T
Q  990 ccaagtcccacatcagatagataacaccgatgataatagtttataa 1035  Q
    ||| || ||||||| ||||||||| ||   ||| ||||||||||||    
T  19712503 ccatgttccacatcggatagataagactcttgagaatagtttataa 19712458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 614 - 667
Target Start/End: Complemental strand, 1894693 - 1894640
Alignment:
Q  614 attttgaccaagtcaatgctgaagtggacgtcatgtgtgtaattttttttaatt 667  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  1894693 attttgaccaagtcaatgctgatgtggacgccatgtgtgtaattttttttaatt 1894640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 893 - 1011
Target Start/End: Complemental strand, 12124887 - 12124772
Alignment:
Q  893 catggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatcca 992  Q
    |||| ||||||||  ||||||||||||| | || |||||||| ||||||| ||| ||||||||  ||||||||||||   | |||||||||||||| | |    
T  12124887 catgatatcagagcatgtcgaattcaagggccacctacctattcacgcac-aagcccaaagag--tgttgggcgtgaaaggatgtattgggaaaaaccta 12124791  T
Q  993 agtcccacatcagatagat 1011  Q
    |||||||||||||||||||    
T  12124790 agtcccacatcagatagat 12124772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 546 - 632
Target Start/End: Complemental strand, 12799052 - 12798966
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgc 632  Q
    |||||||||||||||||||  || |||| ||| ||  ||||||| ||||||||||| ||| ||| ||||||||||||||||||||||    
T  12799052 ctaacaaaataaaatacaaaacaaccccctaagtattgtcccttctgcagttttggccccccaggccaattttgaccaagtcaatgc 12798966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 891 - 1003
Target Start/End: Complemental strand, 29742631 - 29742520
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaat 989  Q
    ||||||||||||||| |||||||||||||| | ||  ||||||| ||||||||||| ||||  |||||||||||||||| || | |||||| |||||||     
T  29742631 aacatggtatcagagcttgtcgaattcaagggccacttacctattcacgcaccaagcccaa--agagtgttgggcgtgaggggggtgtattaggaaaaac 29742534  T
Q  990 ccaagtcccacatc 1003  Q
      ||||||||||||    
T  29742533 ttaagtcccacatc 29742520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 894 - 1013
Target Start/End: Complemental strand, 11313578 - 11313458
Alignment:
Q  894 atggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaaaaatc 990  Q
    |||||||||||| |||||||||||||| | |  |||  ||||| ||||||||||| ||||||||  || ||||||||||| |  |||||||||||||| |    
T  11313578 atggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag--tgctgggcgtgaggggggtgtattgggaaaaacc 11313481  T
Q  991 caagtcccacatcagatagataa 1013  Q
    ||| ||||||||| |||||||||    
T  11313480 caaatcccacatcggatagataa 11313458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 894 - 1013
Target Start/End: Complemental strand, 13692362 - 13692244
Alignment:
Q  894 atggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatccaa 993  Q
    ||||||| |||| |||||||||||||| ||||  || |||||||||||| ||| |||||  ||||||| || |||| | | ||||||||||||||  |||    
T  13692362 atggtattagagcttgtcgaattcaagggtcacttatctatccacgcactaagcccaaaatgagtgtt-ggagtgacggggtgtattgggaaaaactcaa 13692264  T
Q  994 gtcccacatcagatagataa 1013  Q
    ||| |||||| |||||||||    
T  13692263 gtctcacatcggatagataa 13692244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 977 - 1036
Target Start/End: Original strand, 25998809 - 25998868
Alignment:
Q  977 tattgggaaaaatccaagtcccacatcagatagataacaccgatgataatagtttataaa 1036  Q
    |||||||||||| |||||||||||||| ||||||||| ||  ||||||||||||||||||    
T  25998809 tattgggaaaaacccaagtcccacatcggatagataagactcatgataatagtttataaa 25998868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 977 - 1036
Target Start/End: Original strand, 26098334 - 26098393
Alignment:
Q  977 tattgggaaaaatccaagtcccacatcagatagataacaccgatgataatagtttataaa 1036  Q
    |||||||||||| |||||||||||||| ||||||||| ||  ||||||||||||||||||    
T  26098334 tattgggaaaaacccaagtcccacatcggatagataagactcatgataatagtttataaa 26098393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 954 - 1010
Target Start/End: Complemental strand, 15101247 - 15101190
Alignment:
Q  954 agagtgttgggcgtgaggagt-tgtattgggaaaaatccaagtcccacatcagataga 1010  Q
    |||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||    
T  15101247 agagtgttgggcgtgaggggggtgtattgggaaaaatccaagtcccacatcggataga 15101190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 546 - 663
Target Start/End: Complemental strand, 30370081 - 30369965
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtc 645  Q
    |||||||||||||||||||  | |||||| || ||  | || |||||||||||||| | | |||||||||||||||| |||||| ||||| ||||||  |    
T  30370081 ctaacaaaataaaatacaaaactgcccct-aagtattgcccattttgcagttttggcctcccagaccaattttgaccgagtcaaggctgacgtggacacc 30369983  T
Q  646 atgtgtgtaatttttttt 663  Q
    | ||| ||||||||||||    
T  30369982 acgtgagtaatttttttt 30369965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 546 - 668
Target Start/End: Original strand, 2164473 - 2164591
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtc 645  Q
    |||| ||| ||||||||| | ||||||| ||| ||| |||||||||||| || ||  ||| | ||| ||||||||||||||||||| |||  ||||||      
T  2164473 ctaataaagtaaaatacagttcagccccctaagtactgtcccttttgcaattgtg--cccccggactaattttgaccaagtcaatgttgatctggacg-- 2164568  T
Q  646 atgtgtgtaattttttttaatta 668  Q
    | |||||||||||||||||||||    
T  2164569 acgtgtgtaattttttttaatta 2164591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 546 - 668
Target Start/End: Original strand, 2176106 - 2176224
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtc 645  Q
    |||| ||| ||||||||| | ||||||| ||| ||| |||||||||||| || ||  ||| | ||| ||||||||||||||||||| |||  ||||||      
T  2176106 ctaataaagtaaaatacagttcagccccctaagtactgtcccttttgcaattgtg--cccccggactaattttgaccaagtcaatgttgatctggacg-- 2176201  T
Q  646 atgtgtgtaattttttttaatta 668  Q
    | |||||||||||||||||||||    
T  2176202 acgtgtgtaattttttttaatta 2176224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 891 - 955
Target Start/End: Original strand, 8929957 - 8930021
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagag 955  Q
    ||||||||||||||| |||||||||||||||| || ||||||||  |||||||||  ||||||||    
T  8929957 aacatggtatcagagcttgtcgaattcaagagccacctacctattaacgcaccaaatccaaagag 8930021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 891 - 1010
Target Start/End: Complemental strand, 18494473 - 18494353
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaaaa 987  Q
    ||||||||||||||| |||||||||||||| |    |||  ||||| ||||||||||| | ||||||  || ||||||||||| |  |||||||||||||    
T  18494473 aacatggtatcagagcttgtcgaattcaagggctgcctaaacctattcacgcaccaagcctaaagag--tgctgggcgtgaggggggtgtattgggaaaa 18494376  T
Q  988 atccaagtcccacatcagataga 1010  Q
    | |||| ||||||||||||||||    
T  18494375 acccaaatcccacatcagataga 18494353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 977 - 1013
Target Start/End: Original strand, 24558575 - 24558611
Alignment:
Q  977 tattgggaaaaatccaagtcccacatcagatagataa 1013  Q
    |||||||||||||||||||||||||||||||||||||    
T  24558575 tattgggaaaaatccaagtcccacatcagatagataa 24558611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 891 - 955
Target Start/End: Original strand, 30539347 - 30539411
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagag 955  Q
    |||||| ||||| || |||||||||||||| | || |||||||||||||||||||| ||||||||    
T  30539347 aacatgctatcatagcttgtcgaattcaagggccacctacctatccacgcaccaagcccaaagag 30539411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 585 - 663
Target Start/End: Original strand, 12798818 - 12798895
Alignment:
Q  585 cccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaatttttttt 663  Q
    |||||||| |||||||| ||| |||  |||||||||||||||||| ||||| ||||||| || || |||||||||||||    
T  12798818 cccttttgtagttttggcccc-caggtcaattttgaccaagtcaaagctgacgtggacgccacgtatgtaatttttttt 12798895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 585 - 662
Target Start/End: Original strand, 28574656 - 28574731
Alignment:
Q  585 cccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaattttttt 662  Q
    |||||||| ||||||||||  ||||||||||||||||||||| || ||||| |||||||  |  ||||||||||||||    
T  28574656 cccttttgtagttttggtc--tcagaccaattttgaccaagtgaacgctgacgtggacgctacatgtgtaattttttt 28574731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 908 - 1011
Target Start/End: Complemental strand, 15102931 - 15102830
Alignment:
Q  908 tgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaatccaagtcccacatcaga 1006  Q
    ||||||||||||| | || ||||| || ||||||||||  ||||  ||||||||||||||||  | | |||||||||||||| |||||| ||||||||||    
T  15102931 tgtcgaattcaagggccacctaccgattcacgcaccaaacccaa--agagtgttgggcgtgacaggggtgtattgggaaaaacccaagt-ccacatcaga 15102835  T
Q  1007 tagat 1011  Q
    |||||    
T  15102834 tagat 15102830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 894 - 1013
Target Start/End: Original strand, 24558698 - 24558816
Alignment:
Q  894 atggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaatcca 992  Q
    |||||||||||| |||||||||||| | | || ||||| || ||||||||||| ||||  |||||| ||||||||| || | |||||||| ||||| | |    
T  24558698 atggtatcagagcttgtcgaattcatgggccacctaccgattcacgcaccaagcccaa--agagtgctgggcgtgacgggggtgtattggaaaaaaccta 24558795  T
Q  993 agtcccacatcagatagataa 1013  Q
     ||| |||||| |||||||||    
T  24558796 tgtctcacatcggatagataa 24558816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 722 - 801
Target Start/End: Original strand, 1894712 - 1894791
Alignment:
Q  722 tagagggctgtattgtattttattttgccagggg-caaaatcgcaactttctgatatttaggagggcaaaactgctattaa 801  Q
    |||||||||| ||||||||||||||||  |||||  |||||||||||||||| ||| ||| |||  |||||||||||||||    
T  1894712 tagagggctgaattgtattttattttgttaggggttaaaatcgcaactttctaatactta-gagctcaaaactgctattaa 1894791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 726 - 803
Target Start/End: Original strand, 2164691 - 2164770
Alignment:
Q  726 gggctgtattgtattttattttgccagggg--caaaatcgcaactttctgatatttaggagggcaaaactgctattaagc 803  Q
    |||||| ||||||||||||||||  ||||   |||||||||||||| |||||| | ||| || |||||||||||||||||    
T  2164691 gggctggattgtattttattttgttagggtgtcaaaatcgcaacttcctgatactcagggggccaaaactgctattaagc 2164770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 726 - 803
Target Start/End: Original strand, 2176324 - 2176403
Alignment:
Q  726 gggctgtattgtattttattttgccagggg--caaaatcgcaactttctgatatttaggagggcaaaactgctattaagc 803  Q
    |||||| ||||||||||||||||  ||||   |||||||||||||| |||||| | ||| || |||||||||||||||||    
T  2176324 gggctggattgtattttattttgttagggtgtcaaaatcgcaacttcctgatactcagggggccaaaactgctattaagc 2176403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 611 - 663
Target Start/End: Complemental strand, 13398636 - 13398585
Alignment:
Q  611 ccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaatttttttt 663  Q
    |||||||||| || ||||||| | |||||||||||||||||||||||||||||    
T  13398636 ccaattttgatcaggtcaatgtt-aagtggacgtcatgtgtgtaatttttttt 13398585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 956 - 1002
Target Start/End: Original strand, 9496473 - 9496519
Alignment:
Q  956 agtgttgggcgtgaggagttgtattgggaaaaatccaagtcccacat 1002  Q
    |||||||||||||||| | |||||||||| ||| |||||||||||||    
T  9496473 agtgttgggcgtgagggggtgtattgggacaaacccaagtcccacat 9496519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 734 - 807
Target Start/End: Complemental strand, 12798798 - 12798724
Alignment:
Q  734 ttgtattttattttgccaggggcaaaa-tcgcaactttctgatatttaggagggcaaaactgctattaagcctta 807  Q
    |||||||||||||||  ||| |||||| |||||||||  ||| || |||| || |||||||||||||||||||||    
T  12798798 ttgtattttattttgttaggagcaaaaatcgcaacttcttgaaatatagggggccaaaactgctattaagcctta 12798724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 973 - 1011
Target Start/End: Complemental strand, 15102741 - 15102703
Alignment:
Q  973 gttgtattgggaaaaatccaagtcccacatcagatagat 1011  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  15102741 gttgtattgggaaaaacccaagtcccacatcaaatagat 15102703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 891 - 995
Target Start/End: Original strand, 3713107 - 3713209
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatc 990  Q
    |||| |||||||||| ||||||||||||||   || ||||| || | | ||||||| ||||  |||||| ||||||||||  | |||||||| |||||||    
T  3713107 aacaaggtatcagagcttgtcgaattcaaggaccacctaccgattctcacaccaagcccaa--agagtgatgggcgtgagaggatgtattggaaaaaatc 3713204  T
Q  991 caagt 995  Q
    |||||    
T  3713205 caagt 3713209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 868 - 905
Target Start/End: Original strand, 3921617 - 3921654
Alignment:
Q  868 tgttaggtttaaccacgatttctaacatggtatcagag 905  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  3921617 tgttaggtttaaccatgatttctaatatggtatcagag 3921654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 490 - 562
Target Start/End: Original strand, 15139569 - 15139642
Alignment:
Q  490 attggcttaatagcagttttgtcc-cctgaggattaggaagttacgattttagctttctaacaaaataaaatac 562  Q
    ||||||||||||||||||||| || ||| || | ||||||||| ||||||| ||  | ||||||||||||||||    
T  15139569 attggcttaatagcagttttgacctcctaagtactaggaagttgcgatttttgccctttaacaaaataaaatac 15139642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 5e-28; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 510 - 662
Target Start/End: Original strand, 29219094 - 29219246
Alignment:
Q  510 gtcccctgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcag 609  Q
    ||||||| || |||||||||||  ||||||||    |||| |||||||||||||||||| |||| ||| ||| | ||||||||||||||||| ||| ||     
T  29219094 gtcccctaagtattaggaagttgtgattttagtcccctaataaaataaaatacaatccaaccccctaagtacggccccttttgcagttttggccccccaa 29219193  T
Q  610 accaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaattttttt 662  Q
     ||||||||||||||||||||||||| ||||||| || ||| |||||||||||    
T  29219194 gccaattttgaccaagtcaatgctgacgtggacgccacgtgggtaattttttt 29219246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 491 - 643
Target Start/End: Original strand, 34232756 - 34232907
Alignment:
Q  491 ttggcttaatagcagttttgtcccctgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttt 590  Q
    |||| ||||||||||||||| ||||| || ||||||| ||| | ||||| ||   |||| ||||||||||||||| ||||||| ||  ||| | | ||||    
T  34232756 ttggtttaatagcagttttggcccctaagtattagga-gttgcaattttggccccctaataaaataaaatacaattcagccccctatgtactgcctcttt 34232854  T
Q  591 tgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacg 643  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| |||||||    
T  34232855 tgcagttttggccccccagaccaattttgaccaagtcaatgctgatgtggacg 34232907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 891 - 1013
Target Start/End: Original strand, 30065897 - 30066019
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaat 989  Q
    ||||||||||| ||| |||||||||| ||| | || |||||||||||| | || || ||||| |||||||||||||||| || | ||||||||||||||     
T  30065897 aacatggtatctgagcttgtcgaattgaag-gccacctacctatccacacgccgagcccaaaaagagtgttgggcgtgacgggggtgtattgggaaaaac 30065995  T
Q  990 ccaagtcccacatcagatagataa 1013  Q
     |||||||||||||||||||||||    
T  30065996 tcaagtcccacatcagatagataa 30066019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 891 - 1013
Target Start/End: Original strand, 43599423 - 43599546
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaaaa 987  Q
    ||||||||||||||| |||||||||||||| | || |||  ||||| ||||||||||| ||||| |||||| ||||||||||| |  |||||||||||||    
T  43599423 aacatggtatcagagcttgtcgaattcaagggccacctaaacctattcacgcaccaag-ccaaa-agagtgctgggcgtgaggggggtgtattgggaaaa 43599520  T
Q  988 atccaagtcccacatcagatagataa 1013  Q
    | |||||||||||||| |||||||||    
T  43599521 acccaagtcccacatcggatagataa 43599546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 891 - 1013
Target Start/End: Original strand, 15857086 - 15857207
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgagg-agttgtattgggaaaaat 989  Q
    |||||| ||||| || |||||||||||||| | || |||||||| ||||||||||| ||||  ||| ||||||||||||||  | ||||||||||||||     
T  15857086 aacatgttatcaaagcttgtcgaattcaagggccacctacctattcacgcaccaagcccaa--agactgttgggcgtgaggtgggtgtattgggaaaaac 15857183  T
Q  990 ccaagtcccacatcagatagataa 1013  Q
     ||||||||||||| |||||||||    
T  15857184 tcaagtcccacatcggatagataa 15857207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 891 - 1034
Target Start/End: Original strand, 33435791 - 33435932
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatc 990  Q
    |||||||||||| || |||||||||||||| | || ||||  || ||||||||||| ||||||||  || | || |||||| | |||||||||||||| |    
T  33435791 aacatggtatcatagcttgtcgaattcaagggccacctactgattcacgcaccaagcccaaagag--tgctaggtgtgagggggtgtattgggaaaaacc 33435888  T
Q  991 caagtcccacatcagatagataacaccgatgataatagtttata 1034  Q
    ||||||||||||| ||||||||| ||   |||||| ||||||||    
T  33435889 caagtcccacatcggatagataagactcttgataagagtttata 33435932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 894 - 1013
Target Start/End: Original strand, 45122220 - 45122339
Alignment:
Q  894 atggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatcc 991  Q
    |||||||||||| |||||| ||||||||| |  |||  ||||| ||| ||||||| ||||||||  ||||||| |||||| | |||||||||||||| ||    
T  45122220 atggtatcagagcttgtcgtattcaagagccgcctaaacctattcacacaccaagcccaaagag--tgttgggtgtgagggggtgtattgggaaaaaccc 45122317  T
Q  992 aagtcccacatcagatagataa 1013  Q
    |||||||||||| |||||||||    
T  45122318 aagtcccacatctgatagataa 45122339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 585 - 632
Target Start/End: Original strand, 18896520 - 18896567
Alignment:
Q  585 cccttttgcagttttggtccctcagaccaattttgaccaagtcaatgc 632  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||    
T  18896520 cccttttgcacttttggtccctcagaccaattttgaccaagtcaatgc 18896567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 891 - 1013
Target Start/End: Original strand, 35561571 - 35561694
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaaaa 987  Q
    ||||||||||||||| |||||||||||||| | |  |||  ||||| ||||||||||| ||||||||  || ||||||||||| |  ||| |||||||||    
T  35561571 aacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag--tgctgggcgtgaggggggtgtgttgggaaaa 35561668  T
Q  988 atccaagtcccacatcagatagataa 1013  Q
    | |||||||||||||| |||||||||    
T  35561669 acccaagtcccacatcggatagataa 35561694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 526 - 668
Target Start/End: Complemental strand, 45522471 - 45522332
Alignment:
Q  526 gaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaag 625  Q
    |||||| ||||||||||   |||||||||||||||||||  | ||||| ||| ||  | |||||||||||||||||  || |||||||||||| ||||||    
T  45522471 gaagttgcgattttagccccctaacaaaataaaatacaaaaccgccccctaagtattgccccttttgcagttttgg--ccccagaccaattttaaccaag 45522374  T
Q  626 tcaatgctgaagtggacgtcatgtgtgtaattttttttaatta 668  Q
    |||||||  | ||||| | ||  ||||||||||||||||||||    
T  45522373 tcaatgcacacgtggatg-cacatgtgtaattttttttaatta 45522332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 547 - 631
Target Start/End: Complemental strand, 5899538 - 5899456
Alignment:
Q  547 taacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatg 631  Q
    ||||||||||||||||||| ||||||| ||| ||  | | |||||||||||||||  || |||||||||||||||||||||||||    
T  5899538 taacaaaataaaatacaattcagccccctaagtattgcctcttttgcagttttgg--ccccagaccaattttgaccaagtcaatg 5899456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 546 - 635
Target Start/End: Original strand, 18929356 - 18929444
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctga 635  Q
    |||||||||||||||||||||||||||||||| ||   ||||||||| |||||||| | |  |  |||||||||||||||||||||||||    
T  18929356 ctaacaaaataaaatacaatccagccccttaagta-tttcccttttgtagttttggcctccaatgccaattttgaccaagtcaatgctga 18929444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 547 - 641
Target Start/End: Complemental strand, 4695013 - 4694920
Alignment:
Q  547 taacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctc-agaccaattttgaccaagtcaatgctgaagtgga 641  Q
    ||||||||||||||||||| |||||||| || ||| | || |||||||||||||| ||||| ||| |||||||||||||||||||| ||| |||||    
T  4695013 taacaaaataaaatacaattcagcccct-aagtactgcccattttgcagttttgg-ccctctagatcaattttgaccaagtcaatgttgacgtgga 4694920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 929 - 1013
Target Start/End: Complemental strand, 8559837 - 8559754
Alignment:
Q  929 acctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaaaaatccaagtcccacatcagatagataa 1013  Q
    |||||| ||||||||||| ||||||||  || ||||||||||| |  |||||||||||||| |||||||||||||| |||||||||    
T  8559837 acctattcacgcaccaagcccaaagag--tgctgggcgtgaggggggtgtattgggaaaaacccaagtcccacatcggatagataa 8559754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 547 - 631
Target Start/End: Complemental strand, 18929613 - 18929526
Alignment:
Q  547 taacaaaataaaatacaat---ccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatg 631  Q
    |||||||||||||| ||||   ||| |||| ||| ||||| || ||||||||||||||  || |||||||||||||||||||||||||    
T  18929613 taacaaaataaaatccaattatccaaccccctaaataccgacctttttgcagttttggcaccccagaccaattttgaccaagtcaatg 18929526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 612 - 664
Target Start/End: Original strand, 5899311 - 5899363
Alignment:
Q  612 caattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaatttttttta 664  Q
    |||||||||||||||||||||||| ||||||| || || ||||||||||||||    
T  5899311 caattttgaccaagtcaatgctgatgtggacgacacgtttgtaatttttttta 5899363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 546 - 641
Target Start/End: Original strand, 45522191 - 45522284
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtgga 641  Q
    |||||||||||||||||||  | ||||| ||| ||  | ||||||||||||||||| |||  ||| |||||||||||||||||| ||||| |||||    
T  45522191 ctaacaaaataaaatacaaaaccgccccctaagtattgccccttttgcagttttggcccc--agatcaattttgaccaagtcaaagctgatgtgga 45522284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 547 - 663
Target Start/End: Original strand, 2044729 - 2044843
Alignment:
Q  547 taacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtca 646  Q
    ||||||||||||||||||| || |||| ||| | | |||| ||||||| |||||  |||  ||||||| |||||||||||||| | ||| || |||| ||    
T  2044729 taacaaaataaaatacaattcaaccccctaagtgctgtcctttttgcaattttgacccc--agaccaagtttgaccaagtcaacgatgatgttgacgcca 2044826  T
Q  647 tgtgtgtaatttttttt 663  Q
    |  ||||||||||||||    
T  2044827 taggtgtaatttttttt 2044843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 894 - 955
Target Start/End: Original strand, 22188800 - 22188861
Alignment:
Q  894 atggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagag 955  Q
    ||||||||||||| |||||| |||||| || ||||||| || ||||||||||| ||||||||    
T  22188800 atggtatcagagtctgtcgatttcaagggtaatctaccgattcacgcaccaagcccaaagag 22188861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 977 - 1013
Target Start/End: Complemental strand, 5720979 - 5720943
Alignment:
Q  977 tattgggaaaaatccaagtcccacatcagatagataa 1013  Q
    ||||||||||||||||||||||||||| |||||||||    
T  5720979 tattgggaaaaatccaagtcccacatcggatagataa 5720943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 977 - 1013
Target Start/End: Original strand, 18313776 - 18313812
Alignment:
Q  977 tattgggaaaaatccaagtcccacatcagatagataa 1013  Q
    ||||||||||||||||||||||||||| |||||||||    
T  18313776 tattgggaaaaatccaagtcccacatcggatagataa 18313812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 894 - 969
Target Start/End: Original strand, 25186638 - 25186714
Alignment:
Q  894 atggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagag-tgttgggcgtga 969  Q
    ||||||||||||  ||||||||||||| |||| ||||  || ||||||||||| |||||||| | ||||||||||||    
T  25186638 atggtatcagagcctgtcgaattcaagggtcacctactgattcacgcaccaagcccaaagagtgctgttgggcgtga 25186714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 612 - 668
Target Start/End: Complemental strand, 26889585 - 26889530
Alignment:
Q  612 caattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaattttttttaatta 668  Q
    ||||||||||||||||||||||||  ||| || || |||||||||||||||||||||    
T  26889585 caattttgaccaagtcaatgctgacatgg-cgccacgtgtgtaattttttttaatta 26889530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 733 - 805
Target Start/End: Complemental strand, 9498982 - 9498908
Alignment:
Q  733 attgtattttattttgccagggg--caaaatcgcaactttctgatatttaggagggcaaaactgctattaagcct 805  Q
    ||||||||||||||||  | |||  |||||||||||||| |||||| ||||| || |||||||| ||||||||||    
T  9498982 attgtattttattttgttatggggtcaaaatcgcaacttcctgatacttagggggccaaaactgttattaagcct 9498908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 894 - 945
Target Start/End: Complemental strand, 36039981 - 36039930
Alignment:
Q  894 atggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaa 945  Q
    |||||||||||| |||||||||||||| | |||||| |||| ||||||||||    
T  36039981 atggtatcagagcttgtcgaattcaagggccatctatctattcacgcaccaa 36039930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 894 - 969
Target Start/End: Complemental strand, 41456498 - 41456424
Alignment:
Q  894 atggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga 969  Q
    ||||||||||||| ||||||||||||| | || ||||| || ||||||||||  || || ||||||||||||||||    
T  41456498 atggtatcagagtctgtcgaattcaagggccacctaccgattcacgcaccaaagcccaa-agagtgttgggcgtga 41456424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 547 - 641
Target Start/End: Complemental strand, 2044981 - 2044888
Alignment:
Q  547 taacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtgga 641  Q
    |||||||||||||||||||| |||||| ||| ||   |||||||||||||||||| |||  ||   |||||||| |||| ||||||||| |||||    
T  2044981 taacaaaataaaatacaatctagcccc-taagtattttcccttttgcagttttggccccctaggtaaattttgatcaagacaatgctgatgtgga 2044888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 611 - 661
Target Start/End: Complemental strand, 29219336 - 29219286
Alignment:
Q  611 ccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaatttttt 661  Q
    ||||||||||| ||||||||||||| ||||||| || |||| |||||||||    
T  29219336 ccaattttgacaaagtcaatgctgacgtggacgccacgtgtataatttttt 29219286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 512 - 570
Target Start/End: Complemental strand, 29219417 - 29219359
Alignment:
Q  512 cccctgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagc 570  Q
    ||||| || ||||||||||| ||||||||||   |||||||||||| ||||||||||||    
T  29219417 cccctaagtattaggaagttgcgattttagccccctaacaaaataatatacaatccagc 29219359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 612 - 668
Target Start/End: Complemental strand, 1003740 - 1003683
Alignment:
Q  612 caattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaatt-ttttttaatta 668  Q
    |||||||||||||||||| ||||| ||||||| || ||||||| || |||||||||||    
T  1003740 caattttgaccaagtcaaagctgacgtggacgccacgtgtgtatttattttttaatta 1003683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 5e-28; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 888 - 1034
Target Start/End: Original strand, 32667087 - 32667232
Alignment:
Q  888 tctaacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaa 986  Q
    |||||||||||||||||| |||||||||||||| | |||||||| || ||||||||||| ||||  |||||| ||||||||| || | ||||||||||||    
T  32667087 tctaacatggtatcagagcttgtcgaattcaagggccatctaccgattcacgcaccaagcccaa--agagtgctgggcgtgacgggggtgtattgggaaa 32667184  T
Q  987 aatccaagtcccacatcagatagataacaccgatgataatagtttata 1034  Q
    || | |||||||||||||||||||||| ||   |||||| ||||||||    
T  32667185 aaccgaagtcccacatcagatagataagactcttgataagagtttata 32667232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 891 - 1013
Target Start/End: Original strand, 40009879 - 40010002
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaaaa 987  Q
    |||||||||||||||||||||||||||||| | |  |||  ||||| ||||||||||| ||||||||  || ||||||||||| |  |||||||||||||    
T  40009879 aacatggtatcagagtttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag--tgctgggcgtgaggggggtgtattgggaaaa 40009976  T
Q  988 atccaagtcccacatcagatagataa 1013  Q
    | |||||||||||||| |||||||||    
T  40009977 acccaagtcccacatcggatagataa 40010002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 891 - 1013
Target Start/End: Complemental strand, 33985967 - 33985845
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaa 988  Q
    ||||||||||||||| |||||||||||||| | |  |||  ||||| ||||||||||| ||||||||  |||||||||||| | | |||||||| |||||    
T  33985967 aacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag--tgttgggcgtgaaggggtgtattggcaaaaa 33985870  T
Q  989 tccaagtcccacatcagatagataa 1013  Q
     |||||||||||||| |||||||||    
T  33985869 cccaagtcccacatcggatagataa 33985845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 547 - 659
Target Start/End: Complemental strand, 13491814 - 13491704
Alignment:
Q  547 taacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtca 646  Q
    |||||||||||||||||||||| |||| ||| ||  | || |||||||||||||| ||||||| |||||||||||||||| |||||||  ||||||||||    
T  13491814 taacaaaataaaatacaatccatccccctaagtattg-ccattttgcagttttggcccctcaggccaattttgaccaagtaaatgctg-tgtggacgtca 13491717  T
Q  647 tgtgtgtaatttt 659  Q
     |||| |||||||    
T  13491716 cgtgtataatttt 13491704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 894 - 1013
Target Start/End: Original strand, 17727312 - 17727432
Alignment:
Q  894 atggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaaaaatc 990  Q
    |||||||||||| |||||||||||||| | || |||  ||||| ||||||||||| ||||||||  || ||||||||||| |  |||||||||||||| |    
T  17727312 atggtatcagagcttgtcgaattcaagggccacctaaacctattcacgcaccaagcccaaagag--tgctgggcgtgaggggggtgtattgggaaaaacc 17727409  T
Q  991 caagtcccacatcagatagataa 1013  Q
    ||||||||||||| |||||||||    
T  17727410 caagtcccacatcggatagataa 17727432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 725 - 806
Target Start/End: Original strand, 31227121 - 31227204
Alignment:
Q  725 agggctgtattgtattttattttgccagggg--caaaatcgcaactttctgatatttaggagggcaaaactgctattaagcctt 806  Q
    ||||||||||||||||||||||||  || ||  |||||||||||||| ||||||||||||||| ||||||||||||||| ||||    
T  31227121 agggctgtattgtattttattttgttagagggtcaaaatcgcaacttcctgatatttaggaggccaaaactgctattaaacctt 31227204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 890 - 1013
Target Start/End: Complemental strand, 29695538 - 29695415
Alignment:
Q  890 taacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaa 987  Q
    |||||||||||||||| |||||||||||||| |    |||  ||||| ||||||||||| ||||||||  || ||||||||||| | |||||||||||||    
T  29695538 taacatggtatcagagcttgtcgaattcaagggctgcctaaacctattcacgcaccaagcccaaagag--tgctgggcgtgagggggtgtattgggaaaa 29695441  T
Q  988 atccaagtcccacatcagatagataa 1013  Q
    | ||||||| |||||| |||||||||    
T  29695440 acccaagtctcacatcggatagataa 29695415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 496 - 661
Target Start/End: Complemental strand, 31227199 - 31227033
Alignment:
Q  496 ttaatagcagttttgtcc-cctgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttttgca 594  Q
    ||||||||||||||| || ||| |  || |||||||| |||||||  |  ||||||||||||||||||||| |||||| |||| ||  |||||| |||||    
T  31227199 ttaatagcagttttggcctcctaaatatcaggaagttgcgattttgaccctctaacaaaataaaatacaatacagccctttaagtattgtccctcttgca 31227100  T
Q  595 gttttggtccctc-agaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaatttttt 661  Q
    ||||||| ||||| ||||||||||| |||||| ||||| ||| ||||||| ||  |||||| ||||||    
T  31227099 gttttgg-ccctctagaccaatttttaccaagccaatgatgacgtggacgccacatgtgtattttttt 31227033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 489 - 663
Target Start/End: Complemental strand, 35125240 - 35125069
Alignment:
Q  489 tattggcttaatagcagttttgtcccctgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtccct 588  Q
    ||||| ||||||| |||||||| ||||| || ||||||||||  |||||||  |   ||||||||| |||||||||| |||||||| || ||||| ||||    
T  35125240 tattgacttaataacagttttggcccctaagtattaggaagtagcgattttgaccccctaacaaaagaaaatacaattcagcccct-aagtaccgcccct 35125142  T
Q  589 tttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaatttttttt 663  Q
    ||||||||||||||||   |   |||||||||| || |||| || || |||||||||  ||||||||||||||||    
T  35125141 tttgcagttttggtcc--aatttcaattttgactaattcaacgcggacgtggacgtctcgtgtgtaatttttttt 35125069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 894 - 997
Target Start/End: Original strand, 2464934 - 2465034
Alignment:
Q  894 atggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatccaa 993  Q
    |||||||||||| |||| ||||||||| | || |||||||||||| ||||||| ||||  |||||||||||||||||| | ||| ||| |||||||||||    
T  2464934 atggtatcagagcttgttgaattcaagcgccacctacctatccacacaccaagcccaa--agagtgttgggcgtgagg-ggtgtgttgtgaaaaatccaa 2465030  T
Q  994 gtcc 997  Q
    ||||    
T  2465031 gtcc 2465034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 891 - 1013
Target Start/End: Original strand, 25082731 - 25082845
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatc 990  Q
    ||||||||||||||  ||||||||||||| ||||| || |      |||||||||||| ||||||  |||||||||||||| | |||| |||||||||||    
T  25082731 aacatggtatcagaacttgtcgaattcaatagtcaccttc------acgcaccaagactaaagag--tgttgggcgtgagggggtgtaatgggaaaaatc 25082822  T
Q  991 caagtcccacatcagatagataa 1013  Q
    ||||| ||| |||||||||||||    
T  25082823 caagttccatatcagatagataa 25082845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 890 - 1011
Target Start/End: Original strand, 883961 - 884083
Alignment:
Q  890 taacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaaa 986  Q
    ||||||||||||| || |||||||||||||| | |  |||  ||||| ||||||||||| ||||||||  || ||||||||||| |  ||||||||||||    
T  883961 taacatggtatcaaagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag--tgctgggcgtgaggggggtgtattgggaaa 884058  T
Q  987 aatccaagtcccacatcagatagat 1011  Q
    || |||||||||||||| |||||||    
T  884059 aacccaagtcccacatcggatagat 884083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 546 - 628
Target Start/End: Original strand, 13491531 - 13491613
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtca 628  Q
    |||||||||||||||||||| || |||| ||| ||| | || ||||| |||||||| | ||||||||||||||||||||||||    
T  13491531 ctaacaaaataaaatacaatacatccccgtaagtactgccctttttgtagttttggccgctcagaccaattttgaccaagtca 13491613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 546 - 662
Target Start/End: Complemental strand, 35500351 - 35500234
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttgg-tccctcagaccaattttgaccaagtcaatgctgaagtggacgt 644  Q
    |||||||||||||||||||  | ||||||||| ||  | |||||||||||||||||  ||| ||||| ||||||||||||||||||||  | ||||| |     
T  35500351 ctaacaaaataaaatacaaaaccgccccttaagtattgccccttttgcagttttggcccccacagactaattttgaccaagtcaatgcacacgtggatgc 35500252  T
Q  645 catgtgtgtaattttttt 662  Q
    ||  ||||||||||||||    
T  35500251 cacatgtgtaattttttt 35500234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 885 - 1000
Target Start/End: Complemental strand, 4439303 - 4439188
Alignment:
Q  885 atttctaacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgag-gagttgtattggg 983  Q
    |||| ||| |||||||  ||| ||||| |||||||| |||| ||||||||||| ||| ||||  |||| ||||||||||||||||| ||| ||| |||||    
T  4439303 atttttaatatggtatatgagcttgtcaaattcaagggtcaactacctatccatgcatcaagctcaaaaagagtgttgggcgtgagagag-tgtgttggg 4439205  T
Q  984 aaaaatccaagtcccac 1000  Q
    ||||||| |||||||||    
T  4439204 aaaaatcgaagtcccac 4439188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 495 - 599
Target Start/End: Original strand, 13025532 - 13025636
Alignment:
Q  495 cttaatagcagttttgtcccctgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttttgca 594  Q
    ||||||||||||||||  |||| |  |||||||||||  ||||||  || ||||||| ||||||||||||| ||| ||||||| ||| ||| ||||||||    
T  13025532 cttaatagcagttttgatccctaaatattaggaagttgtgattttgactatctaacagaataaaatacaattcagtcccttaagtactgtctcttttgca 13025631  T
Q  595 gtttt 599  Q
    |||||    
T  13025632 gtttt 13025636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 547 - 657
Target Start/End: Complemental strand, 3198791 - 3198683
Alignment:
Q  547 taacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtca 646  Q
    ||||||||||||||||||| ||||||  ||| |||   |||||||| |||||||  |||  |||||||||||||||||||||||||||| |||| || ||    
T  3198791 taacaaaataaaatacaattcagccctctaagtacgaccccttttgtagttttgacccc--agaccaattttgaccaagtcaatgctgacgtggccgcca 3198694  T
Q  647 tgtgtgtaatt 657  Q
     ||| ||||||    
T  3198693 cgtgagtaatt 3198683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 929 - 1013
Target Start/End: Complemental strand, 883760 - 883677
Alignment:
Q  929 acctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaaaaatccaagtcccacatcagatagataa 1013  Q
    |||||| ||||||||||| ||||||||  || ||||||||||| |  |||||||||||||| |||||||||||||| |||||||||    
T  883760 acctattcacgcaccaagcccaaagag--tgctgggcgtgaggggggtgtattgggaaaaacccaagtcccacatcggatagataa 883677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 954 - 1036
Target Start/End: Complemental strand, 8044681 - 8044599
Alignment:
Q  954 agagtgttgggcgtgaggagttgtattgggaaaaatccaagtcccacatcagatagataacaccgatgataatagtttataaa 1036  Q
    |||||| |||| |||||| | |||||||||||||| ||||||||| |||||||||||||| ||   |||||| ||||||||||    
T  8044681 agagtgctgggtgtgagggggtgtattgggaaaaacccaagtcccgcatcagatagataagactcttgataagagtttataaa 8044599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 484 - 622
Target Start/End: Original strand, 14289257 - 14289394
Alignment:
Q  484 taaaatattggcttaatagcagttttgtcccctgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccg 583  Q
    |||||||  |||||||||||||||||  | ||| || || | |||||| ||||||| ||   ||||||||||||||||||||  |||||||||| ||| |    
T  14289257 taaaataaaggcttaatagcagtttttcctcctaagtatcatgaagttgcgattttggccccctaacaaaataaaatacaatttagccccttaagtactg 14289356  T
Q  584 tcccttttgcagttttggtccctcagaccaattttgacc 622  Q
     | |||||||||||||||  ||| || ||||||||||||    
T  14289357 cctcttttgcagttttggctcct-aggccaattttgacc 14289394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 496 - 601
Target Start/End: Complemental strand, 23993970 - 23993864
Alignment:
Q  496 ttaatagcagttttgtc-ccctgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttttgca 594  Q
    ||||||||||||||| | |||| || |||| |||||| | ||||| ||   |||||||||||||||||||||||||| | ||| ||| |||| |||||||    
T  23993970 ttaatagcagttttggctccctaagtattaagaagttgcaattttggccccctaacaaaataaaatacaatccagcctcctaaatactgtcctttttgca 23993871  T
Q  595 gttttgg 601  Q
    |||||||    
T  23993870 gttttgg 23993864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 910 - 1002
Target Start/End: Original strand, 22447230 - 22447322
Alignment:
Q  910 tcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaatccaagtcccacat 1002  Q
    ||||||||||  | || |||| |||| |||||||||| ||||| |||||| ||| ||||||| | |||||||||||||| |||||||| ||||    
T  22447230 tcgaattcaaaggccacctacatatctacgcaccaagcccaaaaagagtgctggacgtgagggggtgtattgggaaaaacccaagtcctacat 22447322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 891 - 946
Target Start/End: Complemental strand, 93727 - 93672
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaag 946  Q
    ||||||||||||||||||||| |||||||| | || |||||||| |||||||||||    
T  93727 aacatggtatcagagtttgtcaaattcaagggccacctacctattcacgcaccaag 93672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 974 - 1013
Target Start/End: Original strand, 10570924 - 10570963
Alignment:
Q  974 ttgtattgggaaaaatccaagtcccacatcagatagataa 1013  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  10570924 ttgtattgggaaaaacccaagtcccacatcagatagataa 10570963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 868 - 915
Target Start/End: Original strand, 10571029 - 10571076
Alignment:
Q  868 tgttaggtttaaccacgatttctaacatggtatcagagtttgtcgaat 915  Q
    ||||||| | ||||||||||||||| ||||||||||||||||||||||    
T  10571029 tgttaggctcaaccacgatttctaagatggtatcagagtttgtcgaat 10571076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 891 - 1013
Target Start/End: Original strand, 12432010 - 12432133
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgag-gagttgtattgggaaaa 987  Q
    |||||||||||| || ||||| |||||||| | |  |||  ||||| || |||||||| ||||||||  || |||||||||| | | |||||||| ||||    
T  12432010 aacatggtatcaaagcttgtcaaattcaagggccgcctaaacctattcatgcaccaagcccaaagag--tgctgggcgtgagcggggtgtattggaaaaa 12432107  T
Q  988 atccaagtcccacatcagatagataa 1013  Q
    |||||||||||||||| |||||||||    
T  12432108 atccaagtcccacatcggatagataa 12432133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 933 - 1010
Target Start/End: Original strand, 19859986 - 19860062
Alignment:
Q  933 atccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaaaaatccaagtcccacatcagataga 1010  Q
    |||||||||||||| ||||||||  || ||||||||||| |  |||||||||||||| |||||||||||||| ||||||    
T  19859986 atccacgcaccaagcccaaagag--tgctgggcgtgaggggggtgtattgggaaaaacccaagtcccacatcggataga 19860062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 549 - 632
Target Start/End: Original strand, 29370773 - 29370855
Alignment:
Q  549 acaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgc 632  Q
    ||||||||||||||||  | ||||||||| ||| | ||||||||||||||||| ||| ||   |||||||||||||||||||||    
T  29370773 acaaaataaaatacaaaactgccccttaagtactgccccttttgcagttttgg-cccccaagtcaattttgaccaagtcaatgc 29370855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 890 - 984
Target Start/End: Complemental strand, 33277546 - 33277455
Alignment:
Q  890 taacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattggga 984  Q
    |||||||||||||  |||| ||||||||||| |||| |||||||| ||||||||||  ||||  ||| |||||||||||||| | ||||||||||    
T  33277546 taacatggtatcattgtttttcgaattcaagggtcacctacctattcacgcaccaattccaa--agattgttgggcgtgaggcg-tgtattggga 33277455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 547 - 633
Target Start/End: Original strand, 31226906 - 31226991
Alignment:
Q  547 taacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgct 633  Q
    |||||||||||||||||||| | |||| ||| |||   ||||||||||||||| | ||| ||  |||||||||||||||||||||||    
T  31226906 taacaaaataaaatacaatcaaaccccctaagtactaccccttttgcagtttt-gacccccatgccaattttgaccaagtcaatgct 31226991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 586 - 632
Target Start/End: Complemental strand, 43519427 - 43519382
Alignment:
Q  586 ccttttgcagttttggtccctcagaccaattttgaccaagtcaatgc 632  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||    
T  43519427 ccttttgcacttttggtccc-cagaccaattttgaccaagtcaatgc 43519382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 611 - 668
Target Start/End: Original strand, 8740271 - 8740328
Alignment:
Q  611 ccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaattttttttaatta 668  Q
    ||||||||||||||||||| ||||| || |||| || ||||||| |||||||||||||    
T  8740271 ccaattttgaccaagtcaaagctgacgtcgacgccacgtgtgtatttttttttaatta 8740328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 891 - 952
Target Start/End: Original strand, 39108332 - 39108393
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaa 952  Q
    |||||||||||||||||||||||||||||| || |  |||| || ||||||||||| |||||    
T  39108332 aacatggtatcagagtttgtcgaattcaagggttacttaccgattcacgcaccaagcccaaa 39108393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 977 - 1013
Target Start/End: Complemental strand, 6986528 - 6986492
Alignment:
Q  977 tattgggaaaaatccaagtcccacatcagatagataa 1013  Q
    ||||||||||||||||||||||||||| |||||||||    
T  6986528 tattgggaaaaatccaagtcccacatcggatagataa 6986492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 733 - 806
Target Start/End: Complemental strand, 14289338 - 14289264
Alignment:
Q  733 attgtattttattttgccagggg--caaaatcgcaactttctgatatttaggagggcaaaactgctattaagcctt 806  Q
    ||||||||||||||||  |||||  ||||||||||||||  ||||| ||||||||  |||||||||||||||||||    
T  14289338 attgtattttattttgttagggggccaaaatcgcaacttcatgatacttaggagga-aaaactgctattaagcctt 14289264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 891 - 946
Target Start/End: Complemental strand, 93454 - 93399
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaag 946  Q
    ||||||||||| |||||| ||||||||||| | || |||||||| |||||||||||    
T  93454 aacatggtatcggagtttttcgaattcaagggccacctacctattcacgcaccaag 93399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 583 - 658
Target Start/End: Complemental strand, 29370981 - 29370907
Alignment:
Q  583 gtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaattt 658  Q
    |||| |||||||||||||| |||| || ||||||||||| ||||||| ||||| || |||| || |||||||||||    
T  29370981 gtccgttttgcagttttgg-cccttaggccaattttgacaaagtcaaagctgacgtagacgccacgtgtgtaattt 29370907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 596 - 662
Target Start/End: Complemental strand, 8030411 - 8030346
Alignment:
Q  596 ttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaattttttt 662  Q
    |||||||| || || ||||||||||||||||||||| ||| |||| || || |||||||||||||||    
T  8030411 ttttggtctcttaggccaattttgaccaagtcaatgatgacgtgg-cgccacgtgtgtaattttttt 8030346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 975 - 1013
Target Start/End: Original strand, 10485168 - 10485206
Alignment:
Q  975 tgtattgggaaaaatccaagtcccacatcagatagataa 1013  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  10485168 tgtattgggaaaaatccatgtcccacatcggatagataa 10485206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 756 - 806
Target Start/End: Complemental strand, 23993771 - 23993721
Alignment:
Q  756 caaaatcgcaactttctgatatttaggagggcaaaactgctattaagcctt 806  Q
    ||||||||||||||||||||| ||||| |   |||||||||||||||||||    
T  23993771 caaaatcgcaactttctgatacttaggggataaaaactgctattaagcctt 23993721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 733 - 800
Target Start/End: Complemental strand, 31226924 - 31226855
Alignment:
Q  733 attgtattttattttgc--caggggcaaaatcgcaactttctgatatttaggagggcaaaactgctatta 800  Q
    ||||||||||||||||   ||||| ||| ||| ||||||||||||| ||||| || ||||||||||||||    
T  31226924 attgtattttattttgttacagggccaagatctcaactttctgatacttagggggccaaaactgctatta 31226855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 891 - 920
Target Start/End: Complemental strand, 7257599 - 7257570
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaag 920  Q
    ||||||||||||||||||||||||||||||    
T  7257599 aacatggtatcagagtttgtcgaattcaag 7257570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 894 - 955
Target Start/End: Complemental strand, 8044784 - 8044723
Alignment:
Q  894 atggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagag 955  Q
    ||||||||||||||||||||||||||| | || ||||| || |||  |||||| ||||||||    
T  8044784 atggtatcagagtttgtcgaattcaagggccacctaccgattcacaaaccaagcccaaagag 8044723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 588 - 649
Target Start/End: Complemental strand, 12802422 - 12802361
Alignment:
Q  588 ttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgt 649  Q
    ||||||||||||| ||   |||||||||||||| |||||||| ||||| ||||||| |||||    
T  12802422 ttttgcagttttgatcttccagaccaattttgatcaagtcaaagctgacgtggacgccatgt 12802361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 894 - 955
Target Start/End: Complemental strand, 17265211 - 17265150
Alignment:
Q  894 atggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagag 955  Q
    ||||||||||||| ||||||||||||||| || ||| | || |||||||||||  |||||||    
T  17265211 atggtatcagagtctgtcgaattcaagagacacctatcgattcacgcaccaagcacaaagag 17265150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 493 - 609
Target Start/End: Original strand, 23993723 - 23993839
Alignment:
Q  493 ggcttaatagcagttttg-tcccctgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtccctttt 591  Q
    |||||||||||||||||  |||||| || || || ||||| ||||||| | | || |||||||||||||| ||||||||||  ||| ||  |||  ||||    
T  23993723 ggcttaatagcagtttttatcccctaagtatcagaaagttgcgattttgg-tctccaacaaaataaaatataatccagccctataagtattgtctttttt 23993821  T
Q  592 gcagttttggtccctcag 609  Q
    |||||||||| |||||||    
T  23993822 gcagttttggcccctcag 23993839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 5e-28; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 546 - 662
Target Start/End: Original strand, 1406365 - 1406481
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtc 645  Q
    |||||||||||||||||||| |||| || ||| |||   ||||||||||||||||| |||||||  |||||||||||||||||||||||| ||||||| |    
T  1406365 ctaacaaaataaaatacaattcagcgccctaagtactaccccttttgcagttttggcccctcaggtcaattttgaccaagtcaatgctgacgtggacgcc 1406464  T
Q  646 atgtgtgtaattttttt 662  Q
    | |||||||||||||||    
T  1406465 acgtgtgtaattttttt 1406481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 512 - 662
Target Start/End: Complemental strand, 10231170 - 10231020
Alignment:
Q  512 cccctgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagac 611  Q
    ||||| || |||| |||||| ||||||| ||  ||||||||||||||||||||| ||| ||| ||| ||| ||||||||||||||||||| |||||||||    
T  10231170 cccctaagtattaagaagtttcgattttggccctctaacaaaataaaatacaattcagtcccctaagtactgtcccttttgcagttttggcccctcagac 10231071  T
Q  612 caattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaattttttt 662  Q
    |||| || |||||||||||||| | || ||||  | |||||||||| ||||    
T  10231070 caatgttaaccaagtcaatgctaatgtagacgctacgtgtgtaattatttt 10231020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 493 - 663
Target Start/End: Complemental strand, 39384641 - 39384472
Alignment:
Q  493 ggcttaatagcagttttg-tcccctgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtccctttt 591  Q
    ||||||| || ||||||| |||||| || || |||||||| ||| ||| || | |||| ||||||||||||||||||||||| ||| ||| | || ||||    
T  39384641 ggcttaacagtagttttggtcccctaagtatcaggaagttgcgaatttggcctcctaataaaataaaatacaatccagccccctaagtactgcccttttt 39384542  T
Q  592 gcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaatttttttt 663  Q
    ||||||||||  || ||||||||||||||||||||||||||||| || |||| || ||||||  ||||||||    
T  39384541 gcagttttgg--ccccagaccaattttgaccaagtcaatgctgacgtagacgccacgtgtgtggtttttttt 39384472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 547 - 662
Target Start/End: Original strand, 39384292 - 39384407
Alignment:
Q  547 taacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtca 646  Q
    |||||||||||||||||||| |||||| ||| ||||| ||||||| ||||||||| ||| | ||| ||||||||||||||||||||||| ||||||| ||    
T  39384292 taacaaaataaaatacaatcaagccccctaagtaccgccccttttacagttttggccccccggactaattttgaccaagtcaatgctgacgtggacgcca 39384391  T
Q  647 tgtgtgtaattttttt 662  Q
      ||||||| ||||||    
T  39384392 cctgtgtaactttttt 39384407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 891 - 1013
Target Start/End: Original strand, 15391931 - 15392053
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaa 988  Q
    ||||||||||||||| |||||||||||||| | |  |||  ||||| ||||||||||| ||||||||  |||||||||||||| | ||||||||||||||    
T  15391931 aacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag--tgttgggcgtgagggggtgtattgggaaaaa 15392028  T
Q  989 tccaagtcccacatcagatagataa 1013  Q
     |||||||||||||| |||||||||    
T  15392029 cccaagtcccacatcggatagataa 15392053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 891 - 1036
Target Start/End: Original strand, 29413253 - 29413399
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaat 989  Q
    ||||||||||||||| |||||||||||||| | || |||||||||||||||||||| ||||| |||||| ||| ||||| || | ||||||||||||||     
T  29413253 aacatggtatcagagcttgtcgaattcaagggccacctacctatccacgcaccaagcccaaaaagagtgctggacgtgaggggggtgtattgggaaaaac 29413352  T
Q  990 ccaagtcccacatcagatagataacaccgatgataatagtttataaa 1036  Q
    |||||||| || || | ||||||| ||   |||||| ||||||||||    
T  29413353 ccaagtcctacttcgggtagataagactcttgataagagtttataaa 29413399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 891 - 1036
Target Start/End: Complemental strand, 38871147 - 38871002
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaa- 988  Q
    ||||||||||||||| |||||||||||||| | || |||||||||||||||||||| ||||  |||||| ||| ||||| || | ||||||||||||||     
T  38871147 aacatggtatcagagcttgtcgaattcaagggccacctacctatccacgcaccaagcccaa--agagtgctggacgtgaggggggtgtattgggaaaaac 38871050  T
Q  989 tccaagtcccacatcagatagataacaccgatgataatagtttataaa 1036  Q
     |||||||||||||||||| ||||| ||   |||||| ||||||||||    
T  38871049 cccaagtcccacatcagatcgataagactcttgataaaagtttataaa 38871002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 546 - 661
Target Start/End: Original strand, 13574871 - 13574986
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtc 645  Q
    |||||||||||||||||||| ||||||||||| |||   |||||||||| ||||||||||  ||  |||||||||||||||||||||||| ||||  | |    
T  13574871 ctaacaaaataaaatacaattcagccccttaagtactaccccttttgcaattttggtcccctaggtcaattttgaccaagtcaatgctgacgtggttgcc 13574970  T
Q  646 atgtgtgtaatttttt 661  Q
    | ||||||||||||||    
T  13574971 acgtgtgtaatttttt 13574986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 891 - 1010
Target Start/End: Original strand, 12314483 - 12314603
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaaaa 987  Q
    ||||||||||||||| |||||||||||||| | |  |||  ||||| ||||||| ||| ||||||||  |||||||||||||| |  |||||||||||||    
T  12314483 aacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcactaagcccaaagag--tgttgggcgtgaggggggtgtattgggaaaa 12314580  T
Q  988 atccaagtcccacatcagataga 1010  Q
    |||||||||||||||| ||||||    
T  12314581 atccaagtcccacatcggataga 12314603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 547 - 642
Target Start/End: Complemental strand, 13575161 - 13575067
Alignment:
Q  547 taacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggac 642  Q
    ||||||||||||||||||||||||||||||| ||  || | ||||||||||||||||||  ||  ||| |||||||||||||||||||| ||||||    
T  13575161 taacaaaataaaatacaatccagccccttaagtattgttctttttgcagttttggtcccctaggtcaa-tttgaccaagtcaatgctgatgtggac 13575067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 495 - 635
Target Start/End: Complemental strand, 10532569 - 10532428
Alignment:
Q  495 cttaatagcagttttgtcccctgagg-attaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttttgc 593  Q
    |||||||||||||||| ||||  | | ||||||||||||||||||| ||  || |||||||||||||||||||||||||| ||| ||  |    ||||||    
T  10532569 cttaatagcagttttggccccctatgtattaggaagttacgattttggccctccaacaaaataaaatacaatccagccccctaagtattgcttattttgc 10532470  T
Q  594 agttttggtccctcagaccaattttgaccaagtcaatgctga 635  Q
    |||||||  |||| |||||||||||||| || |||| |||||    
T  10532469 agttttgacccctgagaccaattttgactaattcaacgctga 10532428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 547 - 664
Target Start/End: Complemental strand, 31651664 - 31651547
Alignment:
Q  547 taacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtca 646  Q
    ||||||||||||||| ||| || ||  |||| ||  |||| |||||||||||||| |||  |  ||||||||||| |||||||||| || ||||||||||    
T  31651664 taacaaaataaaatataattcaaccatttaactattgtccattttgcagttttggcccccaatgccaattttgacaaagtcaatgccgatgtggacgtca 31651565  T
Q  647 tgtgtgtaatttttttta 664  Q
     |||||||||||||||||    
T  31651564 cgtgtgtaatttttttta 31651547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 891 - 1013
Target Start/End: Complemental strand, 2997253 - 2997132
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaat 989  Q
    |||||||||| |||| || ||||||||||  | || ||||| || ||||||||||| ||||||||  || ||||||||| |||| ||||||||||||||     
T  2997253 aacatggtattagagcttctcgaattcaaaggccacctaccgattcacgcaccaagcccaaagag--tgctgggcgtgacggaggtgtattgggaaaaac 2997156  T
Q  990 ccaagtcccacatcagatagataa 1013  Q
    | |||||||||||| |||||||||    
T  2997155 ctaagtcccacatcggatagataa 2997132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 495 - 598
Target Start/End: Complemental strand, 84331 - 84228
Alignment:
Q  495 cttaatagcagttttgtcccctgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttttgca 594  Q
    ||||||||||||||||   ||| || || |||||||| | ||||| ||| ||||||||||||||||||||||||||| | ||| ||| | ||||||||||    
T  84331 cttaatagcagttttgcatcctaagtatcaggaagttgcaattttggctctctaacaaaataaaatacaatccagcctcataagtacggccccttttgca 84232  T
Q  595 gttt 598  Q
    ||||    
T  84231 gttt 84228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 891 - 1013
Target Start/End: Complemental strand, 5325125 - 5325002
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaaaa 987  Q
    ||||||||||||||| || ||||||||||| | | ||||  ||||| ||||||||||| ||||||||  || ||||||||||| |  |||||||||||||    
T  5325125 aacatggtatcagagcttatcgaattcaagggccgtctaaacctattcacgcaccaaggccaaagag--tgctgggcgtgaggggggtgtattgggaaaa 5325028  T
Q  988 atccaagtcccacatcagatagataa 1013  Q
    || ||||||||||||| |||| ||||    
T  5325027 attcaagtcccacatcggataaataa 5325002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 545 - 665
Target Start/End: Complemental strand, 6940927 - 6940813
Alignment:
Q  545 tctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgt 644  Q
    |||||||||||||||||||||||||||| |||| ||| | |  ||||||||||| || ||   ||||||||||||| ||| |||||||||| |||||||     
T  6940927 tctaacaaaataaaatacaatccagccc-ttaagtacggcctattttgcagtttgggccc---agaccaattttgatcaattcaatgctgatgtggacgc 6940832  T
Q  645 catgtgtgtaattttttttaa 665  Q
    ||  |||||||||||||||||    
T  6940831 ca--tgtgtaattttttttaa 6940813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 493 - 631
Target Start/End: Original strand, 10532215 - 10532353
Alignment:
Q  493 ggcttaatagcagttttgtcccc-tgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtccctttt 591  Q
    |||||||||||||||||| |||| | || ||||||||||| |||||||  |   | |||||||||||||| |||||| |||| ||| |   | |||||||    
T  10532215 ggcttaatagcagttttgaccccctaagtattaggaagttgcgattttgaccccc-aacaaaataaaatataatccaaccccctaagttttgcccctttt 10532313  T
Q  592 gcagttttggtccctcagaccaattttgaccaagtcaatg 631  Q
    |||||||||| ||| || ||||||||||||||||||||||    
T  10532314 gcagttttggccccccataccaattttgaccaagtcaatg 10532353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 546 - 664
Target Start/End: Original strand, 39411637 - 39411752
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtc 645  Q
    |||||||||||||||||||| |||||   ||| ||  ||| |||| |||||||||||||   ||||||||||||| ||| |||||||||| ||||||| |    
T  39411637 ctaacaaaataaaatacaattcagccttctaagtattgtctcttt-gcagttttggtccg--agaccaattttgagcaattcaatgctgacgtggacgcc 39411733  T
Q  646 atgtgtgtaatttttttta 664  Q
    | |||||||||||||||||    
T  39411734 acgtgtgtaatttttttta 39411752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 891 - 1013
Target Start/End: Complemental strand, 42845014 - 42844891
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaat 989  Q
    |||||||||||| ||||||||||||||||| ||||  |  |||||||||||||||  |||||  ||  ||||||||||| || | |||||| | ||||||    
T  42845014 aacatggtatcaaagtttgtcgaattcaagggtcacttctctatccacgcaccaaacccaaaacgaaagttgggcgtgagggggatgtattagaaaaaat 42844915  T
Q  990 ccaagtcccacatcagatagataa 1013  Q
     ||||||||||||| |||||||||    
T  42844914 tcaagtcccacatcggatagataa 42844891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 891 - 1010
Target Start/End: Complemental strand, 43361749 - 43361631
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaaa 988  Q
    ||||||||||||||| |||||||||||||| | |  |||  ||||| ||||||||||| ||||||||  || ||||||||||| | ||||||||| ||||    
T  43361749 aacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagtccaaagag--tgctgggcgtgagggggtgtattggg-aaaa 43361653  T
Q  989 tccaagtcccacatcagataga 1010  Q
     |||||||||||||| ||||||    
T  43361652 cccaagtcccacatcggataga 43361631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 546 - 658
Target Start/End: Original strand, 10230840 - 10230952
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtc 645  Q
    ||||||||||||||| ||||||| |||| ||| ||| |||| |||||||||||||| | | | |  ||||||||||||||| ||||| |  ||||||| |    
T  10230840 ctaacaaaataaaattcaatccaaccccctaagtactgtcctttttgcagttttggcctcgcgggtcaattttgaccaagttaatgccggcgtggacgcc 10230939  T
Q  646 atgtgtgtaattt 658  Q
    | |||||||||||    
T  10230940 acgtgtgtaattt 10230952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 547 - 661
Target Start/End: Complemental strand, 51690459 - 51690347
Alignment:
Q  547 taacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtca 646  Q
    ||||||||||||||||||| ||||||| ||| |||    |||||||||  ||||| |||  |  ||||||||||||||||||||| ||| ||||||| ||    
T  51690459 taacaaaataaaatacaattcagccccctaagtacgactccttttgcaactttggcccc--atgccaattttgaccaagtcaatgttgacgtggacgcca 51690362  T
Q  647 tgtgtgtaatttttt 661  Q
     ||||||||||||||    
T  51690361 cgtgtgtaatttttt 51690347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 548 - 662
Target Start/End: Complemental strand, 29816430 - 29816317
Alignment:
Q  548 aacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcat 647  Q
    |||||||||||||||||| || |||  ||| ||  |||| |||||||||||||| ||| ||  |||||||||||||||||||||||||  |||||| ||     
T  29816430 aacaaaataaaatacaatacaaccctctaagtattgtccattttgcagttttggcccc-catgccaattttgaccaagtcaatgctgatttggacgccac 29816332  T
Q  648 gtgtgtaattttttt 662  Q
     ||||||||| ||||    
T  29816331 atgtgtaattatttt 29816317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 929 - 1004
Target Start/End: Complemental strand, 22892847 - 22892773
Alignment:
Q  929 acctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaatccaagtcccacatca 1004  Q
    |||||| || |||||||| ||||||||  |||||||||||| |||| |||||||||||||| |||||||||||||||    
T  22892847 acctattcatgcaccaagcccaaagag--tgttgggcgtgacggaggtgtattgggaaaaacccaagtcccacatca 22892773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 891 - 1013
Target Start/End: Complemental strand, 24382768 - 24382644
Alignment:
Q  891 aacatggtatcagagtttgtcgaattc--aagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaa 986  Q
    |||||||||||||||||||||||||||  ||| | || |||  || || || | |||||| ||||||||  || ||||||||||| | ||||||| ||||    
T  24382768 aacatggtatcagagtttgtcgaattctcaagggccacctaaaccaattcatgaaccaagcccaaagag--tgctgggcgtgaggggatgtattgagaaa 24382671  T
Q  987 aatccaagtcccacatcagatagataa 1013  Q
    || |||||||||||||| |||||||||    
T  24382670 aaaccaagtcccacatcggatagataa 24382644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 954 - 1034
Target Start/End: Complemental strand, 47086413 - 47086332
Alignment:
Q  954 agagtgttgggcgtga-ggagttgtattgggaaaaatccaagtcccacatcagatagataacaccgatgataatagtttata 1034  Q
    |||||||||||||||| || | |||||||| ||||||||| |||||||||||||||||||| ||   |||||| ||||||||    
T  47086413 agagtgttgggcgtgacgggggtgtattggaaaaaatccatgtcccacatcagatagataagactcttgataagagtttata 47086332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 894 - 1013
Target Start/End: Complemental strand, 3774261 - 3774141
Alignment:
Q  894 atggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattgggaaaaatcca 992  Q
    |||||||||||| |||||||||||||| ||||  ||||||||||| |||  |  ||||| ||||||||| |||||| || | ||||||| |||||   ||    
T  3774261 atggtatcagagcttgtcgaattcaagggtcacttacctatccacacactgatcccaaaaagagtgttgagcgtgaggggggtgtattgagaaaagctca 3774162  T
Q  993 agtcccacatcagatagataa 1013  Q
    ||| ||||||| |||||||||    
T  3774161 agttccacatcggatagataa 3774141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 954 - 1002
Target Start/End: Original strand, 3969009 - 3969057
Alignment:
Q  954 agagtgttgggcgtgaggagttgtattgggaaaaatccaagtcccacat 1002  Q
    ||||||||||| |||||| |||||||||||||||| |||||||||||||    
T  3969009 agagtgttgggtgtgaggggttgtattgggaaaaacccaagtcccacat 3969057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 891 - 971
Target Start/End: Original strand, 11590531 - 11590610
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtgagg 971  Q
    ||||||||||||||| |||||||||||||| | |  |||||||| ||||||||||| || || |||||| |||||||||||    
T  11590531 aacatggtatcagagcttgtcgaattcaagggccgcctacctattcacgcaccaagccccaa-agagtgctgggcgtgagg 11590610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 569 - 632
Target Start/End: Original strand, 3814836 - 3814899
Alignment:
Q  569 gccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgc 632  Q
    |||||||||||| || |  |||||||||||||| ||| ||||||||||||||| ||||||||||    
T  3814836 gccccttaattatcgacttttttgcagttttggccccccagaccaattttgacaaagtcaatgc 3814899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 977 - 1036
Target Start/End: Complemental strand, 38871267 - 38871208
Alignment:
Q  977 tattgggaaaaatccaagtcccacatcagatagataacaccgatgataatagtttataaa 1036  Q
    |||||||||||| |||||||||||||||||||||||| ||   |||||| ||||||||||    
T  38871267 tattgggaaaaacccaagtcccacatcagatagataagactcttgataaaagtttataaa 38871208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 726 - 806
Target Start/End: Original strand, 51690434 - 51690516
Alignment:
Q  726 gggctgtattgtattttattttgccagggg--caaaatcgcaactttctgatatttaggagggcaaaactgctattaagcctt 806  Q
    |||||| ||||||||||||||||  | | |  |||||||||||||||| ||||||||||||  ||||||| ||||||||||||    
T  51690434 gggctgaattgtattttattttgttacgaggccaaaatcgcaactttcggatatttaggagatcaaaactactattaagcctt 51690516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 588 - 654
Target Start/End: Original strand, 7196772 - 7196838
Alignment:
Q  588 ttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgta 654  Q
    |||||||||||| | ||| ||| ||||||||||||||||||| ||||| ||||||| || |||||||    
T  7196772 ttttgcagttttagccccccaggccaattttgaccaagtcaaagctgatgtggacgccacgtgtgta 7196838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 929 - 1013
Target Start/End: Complemental strand, 39649036 - 39648954
Alignment:
Q  929 acctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaaaaatccaagtcccacatcagatagataa 1013  Q
    |||||| ||||||||||| ||||||||  || ||||||||||| |  |||||||||||||| |||||||||||||| |||||||||    
T  39649036 acctattcacgcaccaagcccaaagag--tgatgggcgtgaggggggtgtattgggaaaaacccaagtcccacatc-gatagataa 39648954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 611 - 668
Target Start/End: Original strand, 12075057 - 12075113
Alignment:
Q  611 ccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaattttttttaatta 668  Q
    |||||||||||||||||||| |||| |||| || || |||||||||||||||||||||    
T  12075057 ccaattttgaccaagtcaatcctgacgtgg-cgccacgtgtgtaattttttttaatta 12075113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 546 - 618
Target Start/End: Original strand, 22347571 - 22347646
Alignment:
Q  546 ctaacaaaataaaatacaatccag---ccccttaattaccgtcccttttgcagttttggtccctcagaccaatttt 618  Q
    ||||||||||||||||||||||||   | || ||| ||||| | ||||||||||||||| |||||| |||||||||    
T  22347571 ctaacaaaataaaatacaatccagcaccaccctaagtaccgcctcttttgcagttttggcccctcataccaatttt 22347646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 546 - 643
Target Start/End: Complemental strand, 37008547 - 37008451
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacg 643  Q
    |||||||||||||||||||  | ||||| ||| ||  | |||||||||| |||||| ||| ||| ||||||||||||||||||  ||||| |||||||    
T  37008547 ctaacaaaataaaatacaaaactgccccctaagtattgccccttttgcaattttggcccc-caggccaattttgaccaagtcagagctgacgtggacg 37008451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 891 - 951
Target Start/End: Complemental strand, 20429223 - 20429163
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaa 951  Q
    ||||| ||||||||| |||||||||||||| | || ||| |||||||||||||||| ||||    
T  20429223 aacattgtatcagagcttgtcgaattcaagggccacctatctatccacgcaccaagcccaa 20429163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 975 - 1011
Target Start/End: Complemental strand, 22892535 - 22892499
Alignment:
Q  975 tgtattgggaaaaatccaagtcccacatcagatagat 1011  Q
    |||||||||||||| ||||||||||||||||||||||    
T  22892535 tgtattgggaaaaacccaagtcccacatcagatagat 22892499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 862 - 906
Target Start/End: Original strand, 38733204 - 38733248
Alignment:
Q  862 agattttgttaggtttaaccacgatttctaacatggtatcagagt 906  Q
    ||||| ||||||||| ||||||||||||||| |||||||||||||    
T  38733204 agattgtgttaggttcaaccacgatttctaagatggtatcagagt 38733248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 894 - 962
Target Start/End: Original strand, 40073371 - 40073438
Alignment:
Q  894 atggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttg 962  Q
    |||||||||||| |||||||||||||||| || ||||| || |||| |||||| ||||| |||||||||    
T  40073371 atggtatcagagcttgtcgaattcaagagccacctaccgattcacgaaccaagcccaaa-agagtgttg 40073438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 936 - 1034
Target Start/End: Complemental strand, 21428211 - 21428113
Alignment:
Q  936 cacgcaccaagaccaaagagagtgttgggcgtgagg-agttgtattgggaaaaatccaagtcccacatcagatagataacaccgatgataatagtttata 1034  Q
    ||||||||||| |||||||| || |||||| ||||| || ||||||||||||||| ||||||| ||||  ||||||||| ||   |||||| ||||||||    
T  21428211 cacgcaccaagcccaaagagtgt-ttgggcatgagggaggtgtattgggaaaaattcaagtcctacattggatagataagactcttgataagagtttata 21428113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 890 - 1013
Target Start/End: Original strand, 46098588 - 46098711
Alignment:
Q  890 taacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagttgtattgggaaaa 987  Q
    ||||||||||||| || |||||||||| ||| | |  |||  ||||| ||||||||||| ||||||||  | || ||||||||| | |||||||| ||||    
T  46098588 taacatggtatcaaagcttgtcgaatttaagggccgcctaaacctattcacgcaccaagcccaaagag--tattaggcgtgagggggtgtattggaaaaa 46098685  T
Q  988 atccaagtcccacatcagatagataa 1013  Q
    |  ||||| |||| ||||||||||||    
T  46098686 actcaagttccacgtcagatagataa 46098711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 894 - 1013
Target Start/End: Original strand, 7171644 - 7171765
Alignment:
Q  894 atggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattggg---aaaaat 989  Q
    ||||||||||||  ||||||||||||| | || ||||| || ||||||||||  ||||  ||||||||||||||||  | | |||||||||   ||||||    
T  7171644 atggtatcagagcctgtcgaattcaagggccacctaccgattcacgcaccaaacccaa--agagtgttgggcgtgacaggggtgtattgggaaaaaaaat 7171741  T
Q  990 ccaagtcccacatcagatagataa 1013  Q
    ||| ||||||||| ||||| ||||    
T  7171742 ccatgtcccacataagatatataa 7171765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 589 - 662
Target Start/End: Original strand, 37008314 - 37008385
Alignment:
Q  589 tttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaattttttt 662  Q
    ||||||||||||| |||  || ||||||||||||||||||||||  | ||||||| || |||||||| ||||||    
T  37008314 tttgcagttttggcccc--aggccaattttgaccaagtcaatgcacacgtggacgccacgtgtgtaactttttt 37008385  T

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Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 733 - 802
Target Start/End: Original strand, 39411894 - 39411963
Alignment:
Q  733 attgtattttattttgccagggg-caaaatcgcaactttctgatatttaggagggcaaaactgctattaag 802  Q
    ||||||||||||||||  ||||| ||||||||||||||||| ||| ||||| || ||||||||| ||||||    
T  39411894 attgtattttattttgttaggggtcaaaatcgcaactttcttatacttagg-ggtcaaaactgcaattaag 39411963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 977 - 1035
Target Start/End: Original strand, 45395544 - 45395602
Alignment:
Q  977 tattgggaaaaatccaagtcccacatcagatagataacaccgatgataatagtttataa 1035  Q
    |||||||||||| |||||||||| ||||||||||||| ||   |||||| |||||||||    
T  45395544 tattgggaaaaacccaagtcccatatcagatagataagactcttgataagagtttataa 45395602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 756 - 805
Target Start/End: Complemental strand, 10532263 - 10532214
Alignment:
Q  756 caaaatcgcaactttctgatatttaggagggcaaaactgctattaagcct 805  Q
    |||||||||||||| || ||| ||||| || |||||||||||||||||||    
T  10532263 caaaatcgcaacttcctaatacttagggggtcaaaactgctattaagcct 10532214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 802
Target Start/End: Original strand, 13575136 - 13575213
Alignment:
Q  726 gggctgtattgtattttattttgccaggggc-aaaatcgcaactttctgatatttaggagggcaaaactgctattaag 802  Q
    |||||| ||||||||||||||||  | |||| ||||||||| ||| |||||| ||||| ||  |||||||||||||||    
T  13575136 gggctggattgtattttattttgttatgggccaaaatcgcatcttcctgatacttagggggctaaaactgctattaag 13575213  T

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Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 547 - 600
Target Start/End: Complemental strand, 31907951 - 31907899
Alignment:
Q  547 taacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttg 600  Q
    |||||||||||||||||| |||  |||| || ||||||||||||||||||||||    
T  31907951 taacaaaataaaatacaacccattccct-aagtaccgtcccttttgcagttttg 31907899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 976 - 1013
Target Start/End: Complemental strand, 39649197 - 39649160
Alignment:
Q  976 gtattgggaaaaatccaagtcccacatcagatagataa 1013  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  39649197 gtattgggaaaaacccaagtcccacatcggatagataa 39649160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 547 - 632
Target Start/End: Complemental strand, 44743729 - 44743644
Alignment:
Q  547 taacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgc 632  Q
    ||||||||||||||||||  | ||||| ||| ||   || |||||||||||||||  || || ||||||||||||||| |||||||    
T  44743729 taacaaaataaaatacaaaaccgccccataagtattatctcttttgcagttttggctccccataccaattttgaccaaatcaatgc 44743644  T

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Target: scaffold0400 (Bit Score: 62; Significance: 3e-26; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 546 - 663
Target Start/End: Original strand, 8591 - 8708
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtc 645  Q
    |||||||||||||||||||| |||| || ||| |||   ||||||||||||||||||| | |||||||||||||||||| |||||||||| ||||| |||    
T  8591 ctaacaaaataaaatacaattcagctccataagtactcccccttttgcagttttggtctcccagaccaattttgaccaaatcaatgctgacgtggatgtc 8690  T
Q  646 atgtgtgtaatttttttt 663  Q
    | |||||||||| |||||    
T  8691 acgtgtgtaattgttttt 8708  T

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Target: scaffold0365 (Bit Score: 62; Significance: 3e-26; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 546 - 663
Target Start/End: Original strand, 9234 - 9351
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtc 645  Q
    |||||||||||||||||||| |||| || ||| |||   ||||||||||||||||||| | |||||||||||||||||| |||||||||| ||||| |||    
T  9234 ctaacaaaataaaatacaattcagctccataagtactcccccttttgcagttttggtctcccagaccaattttgaccaaatcaatgctgacgtggatgtc 9333  T
Q  646 atgtgtgtaatttttttt 663  Q
    | |||||||||| |||||    
T  9334 acgtgtgtaattgttttt 9351  T

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Target: scaffold0286 (Bit Score: 60; Significance: 5e-25; HSPs: 3)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 494 - 655
Target Start/End: Original strand, 17639 - 17799
Alignment:
Q  494 gcttaatagcagttttgtcccc-tgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttttg 592  Q
    ||||||||||||||||| |||| |||| || |||||||| |||||||  |   |||||||||||||||||||||||||||| ||| ||| ||||||||||    
T  17639 gcttaatagcagttttggccccctgagtatcaggaagttgcgattttgacaccctaacaaaataaaatacaatccagccccctaagtactgtcccttttg 17738  T
Q  593 cagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaa 655  Q
    ||||||||  ||  ||  ||||||||||||||| ||||||| | ||||||| |||| ||||||    
T  17739 cagttttgtgcc--catgccaattttgaccaagacaatgctaacgtggacgccatgcgtgtaa 17799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 546 - 666
Target Start/End: Complemental strand, 17936 - 17820
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtc 645  Q
    |||| ||| ||||||||| | ||||||| ||| ||| |||||||||||| || ||  ||| | ||| ||||||||||||||||||| |||  ||||||      
T  17936 ctaataaagtaaaatacagttcagccccctaagtactgtcccttttgcaattgtg--cccccggactaattttgaccaagtcaatgttgatctggacg-- 17841  T
Q  646 atgtgtgtaattttttttaat 666  Q
    | |||||||||||||||||||    
T  17840 acgtgtgtaattttttttaat 17820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #3
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 726 - 803
Target Start/End: Complemental strand, 17718 - 17639
Alignment:
Q  726 gggctgtattgtattttattttgccagggg--caaaatcgcaactttctgatatttaggagggcaaaactgctattaagc 803  Q
    |||||| ||||||||||||||||  ||||   |||||||||||||| |||||| | ||| || |||||||||||||||||    
T  17718 gggctggattgtattttattttgttagggtgtcaaaatcgcaacttcctgatactcagggggccaaaactgctattaagc 17639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1138 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 893 - 1034
Target Start/End: Complemental strand, 2069 - 1928
Alignment:
Q  893 catggtatcagagtttgtcgaattcaagagtcatctacctatccacgcaccaagaccaaagagagtgttgggcgtga-ggagttgtattg-ggaaaaatc 990  Q
    |||| ||||||||||||||||||||||| |||| ||||| || ||||||||||| ||||  |||||||||||||||| || | ||||||| | ||||| |    
T  2069 catgctatcagagtttgtcgaattcaagggtcacctaccgattcacgcaccaagcccaa--agagtgttgggcgtgaggggggtgtattgagaaaaaacc 1972  T
Q  991 caagtcccacatcagatagataacaccgatgataatagtttata 1034  Q
    |||||| |||||| ||||||||| ||   |||||| ||||||||    
T  1971 caagtctcacatcggatagataagactcttgataagagtttata 1928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 47; Significance: 3e-17; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 490 - 663
Target Start/End: Complemental strand, 151681 - 151509
Alignment:
Q  490 attggcttaatagcagttttgtcc-cctgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtccct 588  Q
    |||| |||||| |||||||||||| ||| || || ||||| ||  |||||||||   ||||||| |||||||||||| ||||||| ||| ||| | ||||    
T  151681 attgacttaattgcagttttgtcctcctaagtatcaggaa-ttgtgattttagccccctaacaatataaaatacaattcagccccctaagtactgcccct 151583  T
Q  589 tttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaatttttttt 663  Q
    ||||||||||||||||    ||| ||||||||||| ||||||||||| ||| ||| || ||||||| ||||||||    
T  151582 tttgcagttttggtccacgggac-aattttgaccaggtcaatgctgacgtgaacgccacgtgtgtattttttttt 151509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1088 (Bit Score: 45; Significance: 5e-16; HSPs: 2)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 496 - 600
Target Start/End: Complemental strand, 2180 - 2077
Alignment:
Q  496 ttaatagcagttttgtcccctgaggattaggaagttacgattttagctttctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcag 595  Q
    |||||||||||||||||| || || ||||| ||||| ||||||| ||   |||||||||||||||||||| ||||||||||| ||| || ||||||| ||    
T  2180 ttaatagcagttttgtcctctaagcattagaaagttgcgattttggccccctaacaaaataaaatacaattcagccccttaagtactgt-ccttttgtag 2082  T
Q  596 ttttg 600  Q
    |||||    
T  2081 ttttg 2077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1088; HSP #2
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 726 - 801
Target Start/End: Original strand, 2104 - 2180
Alignment:
Q  726 gggctgtattgtattttattttgccagggg--caaaatcgcaactttctgatatttaggagggcaaaactgctattaa 801  Q
    |||||| ||||||||||||||||  |||||  ||||||||||||||||| ||  ||| |||| |||||||||||||||    
T  2104 gggctgaattgtattttattttgttagggggccaaaatcgcaactttctaatgctta-gaggacaaaactgctattaa 2180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 891 - 1010
Target Start/End: Original strand, 13418 - 13538
Alignment:
Q  891 aacatggtatcagagtttgtcgaattcaagagtcatcta--cctatccacgcaccaagaccaaagagagtgttgggcgtgaggagt-tgtattgggaaaa 987  Q
    ||||||||||||||| |||||||||||||| | |  |||  ||||| ||||||||||| ||||||||  || ||||||||||| |  |||||||||||||    
T  13418 aacatggtatcagagcttgtcgaattcaagggccgcctaaacctattcacgcaccaagcccaaagag--tgctgggcgtgaggggggtgtattgggaaaa 13515  T
Q  988 atccaagtcccacatcagataga 1010  Q
    | |||||||||| ||| ||||||    
T  13516 acccaagtcccaaatcggataga 13538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 551 - 643
Target Start/End: Original strand, 9604 - 9694
Alignment:
Q  551 aaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacg 643  Q
    ||||||||||||||| ||||||||||| || || |||||||||| ||||| | |  |||||||||||||| |||||||||||||| |||||||    
T  9604 aaaataaaatacaattcagccccttaagtatcg-cccttttgcaattttgtttca-cagaccaattttgatcaagtcaatgctgacgtggacg 9694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172; HSP #2
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 722 - 804
Target Start/End: Original strand, 9867 - 9950
Alignment:
Q  722 tagagggctgtattgtattttattttgccagggg-caaaatcgcaactttctgatatttaggagggcaaaactgctattaagcc 804  Q
    |||||||||  |||||||||||||||   ||||| |||||||||||||| || ||||| ||| || ||||||||||||||||||    
T  9867 tagagggctagattgtattttattttattaggggtcaaaatcgcaacttcctaatattaagggggtcaaaactgctattaagcc 9950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 546 - 635
Target Start/End: Complemental strand, 162303 - 162216
Alignment:
Q  546 ctaacaaaataaaatacaatccagccccttaattaccgtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctga 635  Q
    |||||||||||||||||||| |||||| |||| ||  ||| ||||||||||||||||||   ||  |||||||||| |||||||||||||    
T  162303 ctaacaaaataaaatacaatacagccctttaagtattgtctcttttgcagttttggtcct--aggtcaattttgactaagtcaatgctga 162216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 19639 - 19547
Alignment:
Q  6 gagtgagatgaagaataagataacttgtgactgaggagaacaaaatgtgatggaaggaagcatagccgacaacgttaacaagcctagtccctg 98  Q
    |||||| |||||||||||||| |||||||| |||| ||||||| ||| ||  |||||||| ||||  || |  ||||||||||||||||||||    
T  19639 gagtgaaatgaagaataagattacttgtgattgagtagaacaagatgcgagtgaaggaagaatagttgatagtgttaacaagcctagtccctg 19547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 733 - 805
Target Start/End: Complemental strand, 37856 - 37783
Alignment:
Q  733 attgtattttattttgccagggg-caaaatcgcaactttctgatatttaggagggcaaaactgctattaagcct 805  Q
    ||||||||||||||||  ||||| |||||||||||||| |||||| ||||| ||  ||||||||| ||||||||    
T  37856 attgtattttattttgttaggggtcaaaatcgcaacttcctgatacttagggggctaaaactgctgttaagcct 37783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 611 - 668
Target Start/End: Original strand, 27636 - 27692
Alignment:
Q  611 ccaattttgaccaagtcaatgctgaagtggacgtcatgtgtgtaattttttttaatta 668  Q
    |||||||||||||||||||| |||| |||| || || |||||||||||||||||||||    
T  27636 ccaattttgaccaagtcaatactgacgtgg-cgccacgtgtgtaattttttttaatta 27692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 726 - 801
Target Start/End: Original strand, 128149 - 128226
Alignment:
Q  726 gggctgtattgtattttattttgccaggggc--aaaatcgcaactttctgatatttaggagggcaaaactgctattaa 801  Q
    |||||| ||||||||||||||||  | ||||  ||||| |||||||||||||| ||||  || |||||||||||||||    
T  128149 gggctggattgtattttattttggtaagggcccaaaattgcaactttctgatacttagagggccaaaactgctattaa 128226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 583 - 643
Target Start/End: Complemental strand, 17666 - 17608
Alignment:
Q  583 gtcccttttgcagttttggtccctcagaccaattttgaccaagtcaatgctgaagtggacg 643  Q
    |||||||||||||||||| ||||  || ||||||||  ||||||||||||||| |||||||    
T  17666 gtcccttttgcagttttgatccc--agtccaattttatccaagtcaatgctgacgtggacg 17608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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