View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2671_low_11 (Length: 370)

Name: NF2671_low_11
Description: NF2671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2671_low_11
NF2671_low_11
[»] chr3 (67 HSPs)
chr3 (1-247)||(35376787-35377033)
chr3 (256-370)||(35376602-35376718)
chr3 (1-68)||(44383308-44383375)
chr3 (3-68)||(52326140-52326205)
chr3 (1-68)||(21217631-21217698)
chr3 (1-68)||(37056942-37057009)
chr3 (1-72)||(46624026-46624097)
chr3 (1-67)||(13348020-13348086)
chr3 (1-61)||(11630642-11630702)
chr3 (3-67)||(27541388-27541452)
chr3 (1-64)||(23592577-23592640)
chr3 (1-64)||(23600712-23600775)
chr3 (1-67)||(5114197-5114263)
chr3 (3-65)||(19149111-19149173)
chr3 (3-65)||(32924169-32924231)
chr3 (3-64)||(35597283-35597344)
chr3 (1-66)||(41309236-41309301)
chr3 (1-65)||(14226593-14226657)
chr3 (1-64)||(35201323-35201386)
chr3 (3-62)||(42358529-42358588)
chr3 (3-66)||(52939772-52939835)
chr3 (3-66)||(55151604-55151667)
chr3 (3-65)||(13735851-13735913)
chr3 (3-65)||(16969454-16969516)
chr3 (1-67)||(25641469-25641535)
chr3 (3-65)||(42356972-42357034)
chr3 (3-65)||(44413283-44413345)
chr3 (4-65)||(36670902-36670963)
chr3 (3-68)||(44813257-44813322)
chr3 (3-67)||(31157563-31157627)
chr3 (11-67)||(33939367-33939423)
chr3 (3-67)||(37302667-37302731)
chr3 (3-67)||(38926749-38926813)
chr3 (3-67)||(44856074-44856138)
chr3 (1-64)||(28539629-28539692)
chr3 (3-70)||(37503630-37503697)
chr3 (1-68)||(44463476-44463543)
chr3 (3-61)||(5244350-5244408)
chr3 (3-65)||(7934095-7934157)
chr3 (3-64)||(24256660-24256721)
chr3 (1-67)||(46965986-46966052)
chr3 (3-65)||(47472450-47472512)
chr3 (4-65)||(288848-288909)
chr3 (27-67)||(6178311-6178351)
chr3 (19-71)||(11075258-11075310)
chr3 (1-61)||(12762581-12762641)
chr3 (1-61)||(42997404-42997464)
chr3 (1-68)||(51982218-51982285)
chr3 (3-66)||(52254025-52254088)
chr3 (9-67)||(7668074-7668132)
chr3 (4-62)||(8847232-8847289)
chr3 (3-65)||(26014933-26014995)
chr3 (19-61)||(37035417-37035459)
chr3 (16-66)||(41670468-41670518)
chr3 (1-67)||(46965895-46965961)
chr3 (40-69)||(9311199-9311228)
chr3 (3-36)||(20547907-20547940)
chr3 (30-67)||(33791668-33791705)
chr3 (1-62)||(39629729-39629790)
chr3 (1-66)||(39630504-39630569)
chr3 (18-71)||(45205413-45205466)
chr3 (19-63)||(11056823-11056867)
chr3 (1-65)||(19960522-19960586)
chr3 (19-67)||(23770631-23770679)
chr3 (1-61)||(34532308-34532368)
chr3 (1-65)||(42889104-42889168)
chr3 (26-66)||(51305453-51305493)
[»] chr1 (53 HSPs)
chr1 (4-74)||(31088303-31088373)
chr1 (3-71)||(45121363-45121431)
chr1 (1-68)||(46907314-46907381)
chr1 (1-67)||(9566846-9566912)
chr1 (1-67)||(21401517-21401583)
chr1 (3-65)||(48470760-48470822)
chr1 (3-68)||(27464942-27465007)
chr1 (1-65)||(19947632-19947696)
chr1 (3-74)||(19055638-19055709)
chr1 (4-59)||(26020970-26021025)
chr1 (1-64)||(30570643-30570706)
chr1 (3-66)||(33100929-33100992)
chr1 (1-67)||(50149065-50149131)
chr1 (3-65)||(26469480-26469542)
chr1 (1-67)||(43775325-43775391)
chr1 (3-65)||(44519039-44519101)
chr1 (3-67)||(649890-649954)
chr1 (1-65)||(3981914-3981978)
chr1 (3-66)||(52576188-52576252)
chr1 (1-67)||(18434914-18434980)
chr1 (1-68)||(30467418-30467485)
chr1 (8-65)||(2571762-2571819)
chr1 (1-65)||(48103250-48103315)
chr1 (8-68)||(2269457-2269517)
chr1 (3-67)||(23645532-23645596)
chr1 (3-67)||(37274919-37274983)
chr1 (8-59)||(6809706-6809757)
chr1 (4-66)||(31827073-31827135)
chr1 (3-61)||(35369821-35369879)
chr1 (1-67)||(45640420-45640486)
chr1 (8-66)||(49647038-49647096)
chr1 (1-66)||(25672461-25672526)
chr1 (1-66)||(50775043-50775108)
chr1 (1-65)||(26207960-26208024)
chr1 (28-68)||(34974722-34974762)
chr1 (1-65)||(50726136-50726200)
chr1 (3-59)||(50932425-50932481)
chr1 (1-65)||(51571234-51571298)
chr1 (10-65)||(8350087-8350142)
chr1 (1-60)||(8447856-8447914)
chr1 (30-69)||(29359773-29359812)
chr1 (3-66)||(30735180-30735243)
chr1 (3-65)||(44914459-44914522)
chr1 (3-65)||(15469945-15470006)
chr1 (3-65)||(37619665-37619727)
chr1 (4-65)||(37685451-37685512)
chr1 (4-65)||(37700006-37700067)
chr1 (28-61)||(41451774-41451807)
chr1 (25-70)||(45333441-45333486)
chr1 (16-68)||(1820991-1821043)
chr1 (3-59)||(3851279-3851335)
chr1 (1-61)||(29706595-29706655)
chr1 (19-71)||(49660317-49660369)
[»] chr5 (35 HSPs)
chr5 (3-68)||(1671663-1671728)
chr5 (1-66)||(5168302-5168367)
chr5 (1-65)||(7287077-7287141)
chr5 (1-68)||(17626105-17626172)
chr5 (1-67)||(7552853-7552919)
chr5 (3-64)||(13168643-13168704)
chr5 (3-68)||(26791129-26791194)
chr5 (3-67)||(18258679-18258743)
chr5 (1-65)||(28306020-28306084)
chr5 (1-69)||(39054706-39054774)
chr5 (1-67)||(8687010-8687076)
chr5 (1-67)||(22972236-22972302)
chr5 (3-65)||(33037641-33037703)
chr5 (1-67)||(39591799-39591865)
chr5 (1-67)||(39592191-39592257)
chr5 (3-64)||(1764345-1764406)
chr5 (3-57)||(7076464-7076518)
chr5 (1-67)||(13310002-13310068)
chr5 (4-65)||(15479591-15479652)
chr5 (10-62)||(2972452-2972504)
chr5 (3-67)||(28467339-28467403)
chr5 (4-68)||(36739070-36739134)
chr5 (3-66)||(35634722-35634785)
chr5 (3-65)||(41321376-41321438)
chr5 (3-68)||(1274479-1274543)
chr5 (1-66)||(3565203-3565268)
chr5 (1-66)||(14051202-14051267)
chr5 (8-68)||(42475557-42475617)
chr5 (1-68)||(4088563-4088630)
chr5 (10-60)||(189596-189646)
chr5 (1-67)||(21353263-21353329)
chr5 (1-66)||(2429126-2429191)
chr5 (8-65)||(5769144-5769201)
chr5 (4-65)||(14923195-14923256)
chr5 (3-67)||(9742265-9742329)
[»] chr4 (61 HSPs)
chr4 (3-68)||(44539855-44539920)
chr4 (3-67)||(29175346-29175410)
chr4 (1-68)||(38382440-38382507)
chr4 (1-68)||(47181960-47182027)
chr4 (1-68)||(48402082-48402149)
chr4 (1-67)||(19473842-19473908)
chr4 (1-67)||(26732344-26732410)
chr4 (3-65)||(39440605-39440667)
chr4 (3-67)||(51986163-51986227)
chr4 (1-68)||(34616680-34616747)
chr4 (5-68)||(37297171-37297234)
chr4 (1-68)||(56363930-56363997)
chr4 (1-67)||(2575676-2575742)
chr4 (1-67)||(39195176-39195242)
chr4 (3-65)||(43175105-43175167)
chr4 (3-65)||(53801647-53801709)
chr4 (3-68)||(23369217-23369282)
chr4 (1-66)||(27050973-27051038)
chr4 (3-67)||(11068809-11068873)
chr4 (3-67)||(26492128-26492192)
chr4 (1-68)||(39478556-39478623)
chr4 (1-67)||(10250401-10250467)
chr4 (4-57)||(3316476-3316529)
chr4 (1-70)||(42853696-42853765)
chr4 (1-66)||(50831642-50831707)
chr4 (3-67)||(31641451-31641515)
chr4 (1-65)||(38376378-38376442)
chr4 (6-62)||(49449036-49449092)
chr4 (2-65)||(5233558-5233621)
chr4 (3-65)||(15175667-15175729)
chr4 (8-66)||(27965111-27965169)
chr4 (25-67)||(32866413-32866455)
chr4 (4-65)||(24045916-24045977)
chr4 (9-66)||(39259080-39259137)
chr4 (26-67)||(54974615-54974656)
chr4 (2-66)||(1872728-1872792)
chr4 (1-68)||(11672008-11672075)
chr4 (1-62)||(31995804-31995867)
chr4 (1-65)||(42491193-42491257)
chr4 (1-68)||(19232019-19232086)
chr4 (3-62)||(24575742-24575801)
chr4 (3-66)||(26724859-26724922)
chr4 (3-66)||(36178027-36178090)
chr4 (25-67)||(515531-515573)
chr4 (4-65)||(7632349-7632410)
chr4 (1-67)||(10473998-10474064)
chr4 (1-71)||(21777485-21777555)
chr4 (3-57)||(38134474-38134528)
chr4 (1-75)||(39654943-39655017)
chr4 (1-59)||(45083091-45083149)
chr4 (1-62)||(46038782-46038841)
chr4 (3-65)||(46213091-46213153)
chr4 (1-66)||(50721631-50721696)
chr4 (1-67)||(55601594-55601659)
chr4 (1-66)||(19174661-19174726)
chr4 (1-66)||(21025721-21025786)
chr4 (26-67)||(35936110-35936151)
chr4 (1-61)||(14603576-14603636)
chr4 (1-57)||(24990234-24990290)
chr4 (10-62)||(46283058-46283109)
chr4 (1-68)||(47744397-47744465)
[»] chr2 (48 HSPs)
chr2 (1-66)||(27490617-27490682)
chr2 (3-67)||(22888703-22888767)
chr2 (1-68)||(3097746-3097813)
chr2 (3-71)||(1248807-1248875)
chr2 (3-67)||(18254095-18254159)
chr2 (3-67)||(32477453-32477517)
chr2 (3-67)||(42421784-42421848)
chr2 (3-62)||(6049236-6049295)
chr2 (1-68)||(13333055-13333122)
chr2 (1-68)||(25270467-25270534)
chr2 (1-64)||(29349625-29349688)
chr2 (1-64)||(41056636-41056699)
chr2 (3-66)||(41195705-41195768)
chr2 (1-66)||(1907650-1907715)
chr2 (3-67)||(9647253-9647317)
chr2 (3-67)||(9990812-9990876)
chr2 (1-68)||(2076688-2076755)
chr2 (1-68)||(8848582-8848649)
chr2 (4-67)||(9194363-9194426)
chr2 (4-67)||(21611541-21611604)
chr2 (3-68)||(43487500-43487565)
chr2 (1-64)||(28494979-28495042)
chr2 (3-66)||(37737858-37737921)
chr2 (10-65)||(42434247-42434302)
chr2 (3-65)||(3838768-3838830)
chr2 (9-67)||(9760145-9760203)
chr2 (18-68)||(17767929-17767979)
chr2 (4-66)||(18846733-18846795)
chr2 (1-66)||(7663954-7664018)
chr2 (4-65)||(32701212-32701273)
chr2 (4-61)||(39147888-39147945)
chr2 (1-61)||(14255422-14255482)
chr2 (4-64)||(34944979-34945039)
chr2 (1-65)||(44654743-44654807)
chr2 (3-65)||(19633403-19633466)
chr2 (3-65)||(19830304-19830367)
chr2 (1-68)||(29879540-29879607)
chr2 (1-67)||(31296657-31296723)
chr2 (1-67)||(44050134-44050200)
chr2 (19-68)||(8293367-8293416)
chr2 (3-64)||(9207711-9207772)
chr2 (16-65)||(30339752-30339801)
chr2 (25-70)||(42340638-42340683)
chr2 (4-66)||(136049-136108)
chr2 (19-67)||(5054058-5054106)
chr2 (1-61)||(19642717-19642777)
chr2 (1-65)||(31415029-31415093)
chr2 (3-67)||(41042375-41042439)
[»] chr7 (37 HSPs)
chr7 (1-64)||(38944916-38944979)
chr7 (1-68)||(46022152-46022219)
chr7 (1-68)||(7701663-7701730)
chr7 (3-66)||(24614203-24614266)
chr7 (3-65)||(38956506-38956568)
chr7 (2-66)||(3614333-3614397)
chr7 (1-65)||(40417893-40417957)
chr7 (3-74)||(32529735-32529806)
chr7 (1-67)||(25192803-25192869)
chr7 (3-66)||(41189428-41189493)
chr7 (6-63)||(32803813-32803870)
chr7 (1-66)||(35072249-35072314)
chr7 (4-65)||(41989628-41989689)
chr7 (3-67)||(3937009-3937073)
chr7 (3-66)||(40112841-40112904)
chr7 (1-63)||(10700076-10700138)
chr7 (1-66)||(31445437-31445502)
chr7 (8-66)||(35098590-35098648)
chr7 (1-67)||(43942751-43942817)
chr7 (3-65)||(44895460-44895522)
chr7 (34-67)||(6522159-6522192)
chr7 (1-66)||(41018783-41018848)
chr7 (1-65)||(43159463-43159527)
chr7 (16-67)||(1284548-1284599)
chr7 (10-65)||(39110991-39111046)
chr7 (4-43)||(41863539-41863578)
chr7 (3-65)||(22918057-22918119)
chr7 (12-66)||(46095083-46095137)
chr7 (10-71)||(2305752-2305813)
chr7 (4-65)||(27568143-27568204)
chr7 (1-73)||(35600791-35600864)
chr7 (1-62)||(42553017-42553078)
chr7 (2-67)||(49069364-49069429)
chr7 (1-65)||(9428535-9428599)
chr7 (1-61)||(18889919-18889979)
chr7 (342-370)||(30864468-30864496)
chr7 (28-68)||(47356130-47356170)
[»] chr6 (26 HSPs)
chr6 (1-68)||(4820486-4820553)
chr6 (1-68)||(16199569-16199636)
chr6 (1-67)||(26595468-26595534)
chr6 (1-66)||(32316815-32316880)
chr6 (3-67)||(33430248-33430312)
chr6 (3-65)||(552914-552976)
chr6 (3-65)||(14818053-14818115)
chr6 (1-65)||(277110-277174)
chr6 (3-67)||(15974729-15974793)
chr6 (1-65)||(22079451-22079515)
chr6 (1-60)||(18737460-18737519)
chr6 (3-65)||(31077915-31077977)
chr6 (1-67)||(34047506-34047572)
chr6 (9-66)||(1156847-1156904)
chr6 (1-67)||(24900893-24900959)
chr6 (3-65)||(5694039-5694101)
chr6 (1-62)||(3552046-3552107)
chr6 (1-54)||(3853206-3853259)
chr6 (1-65)||(33603168-33603232)
chr6 (1-64)||(11612307-11612370)
chr6 (5-67)||(17181821-17181883)
chr6 (1-71)||(35213443-35213512)
chr6 (14-67)||(91793-91846)
chr6 (1-66)||(30457624-30457689)
chr6 (1-70)||(34048621-34048690)
chr6 (3-39)||(5570252-5570288)
[»] chr8 (32 HSPs)
chr8 (1-67)||(37133748-37133814)
chr8 (1-66)||(29025379-29025444)
chr8 (4-65)||(4054174-4054235)
chr8 (3-68)||(27325879-27325944)
chr8 (3-67)||(12898815-12898879)
chr8 (1-65)||(22719559-22719623)
chr8 (3-66)||(24479344-24479407)
chr8 (3-66)||(34186728-34186791)
chr8 (1-65)||(23754594-23754658)
chr8 (3-67)||(37449311-37449375)
chr8 (10-65)||(7598836-7598891)
chr8 (1-64)||(36660339-36660402)
chr8 (1-67)||(13106599-13106665)
chr8 (4-65)||(7271972-7272033)
chr8 (1-66)||(11253429-11253494)
chr8 (1-62)||(36816507-36816568)
chr8 (4-64)||(32133445-32133505)
chr8 (8-68)||(34796508-34796568)
chr8 (3-59)||(36251447-36251503)
chr8 (3-66)||(10692552-10692615)
chr8 (1-68)||(10839367-10839434)
chr8 (28-71)||(13244352-13244395)
chr8 (1-67)||(21526165-21526232)
chr8 (1-60)||(27854661-27854720)
chr8 (3-62)||(32501087-32501146)
chr8 (4-66)||(34639655-34639717)
chr8 (3-65)||(42768325-42768387)
chr8 (1-67)||(43397900-43397966)
chr8 (28-61)||(2621927-2621960)
chr8 (1-66)||(36969561-36969626)
chr8 (3-59)||(5277393-5277449)
chr8 (338-370)||(44380665-44380697)
[»] scaffold0199 (1 HSPs)
scaffold0199 (3-67)||(8789-8853)
[»] scaffold0056 (1 HSPs)
scaffold0056 (3-67)||(76505-76569)
[»] scaffold0098 (1 HSPs)
scaffold0098 (3-70)||(49416-49483)
[»] scaffold0148 (1 HSPs)
scaffold0148 (9-67)||(20787-20845)
[»] scaffold0519 (1 HSPs)
scaffold0519 (1-66)||(11901-11966)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-66)||(16676-16740)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-66)||(56104-56168)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-69)||(71472-71540)
[»] scaffold0087 (1 HSPs)
scaffold0087 (1-65)||(53249-53313)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-61)||(213742-213802)


Alignment Details
Target: chr3 (Bit Score: 211; Significance: 1e-115; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 35377033 - 35376787
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactcttatttaaaggtgggatatggaaggaggactagtt 100  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35377033 ttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaactcttatttaaaggtgggatatggaaggaggactagtt 35376934  T
Q  101 tttggagggagtgttggttcgaaaattcaccgttgtgcaagtagtacccttgtctattctctctagcgacagacaaggatgcaaaggtggaggacgcgag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||    
T  35376933 tttggagggagtgttggttcgaaaattcaccgttgtgcaagtagtaccctcgtctattctctctagcgacagacaaggatgcaaaggtggaggatgtgag 35376834  T
Q  201 taagagaatgggttatttgtaggttgacttggtccttgaggagaggg 247  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  35376833 taagagaatgagttatttgtaggtggacttggtccttgaggagaggg 35376787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 256 - 370
Target Start/End: Complemental strand, 35376718 - 35376602
Alignment:
Q  256 gttggaaggtatgaggtggata-gtggttgtggtgtggtg-ctgagggagagtggtaattttaaggttaactccacatattttcttttaaattaaagaga 353  Q
    |||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  35376718 gttggaaggtatgaggcggataagtggttgtggtgtggtgtctgagggagagtggtaattttaaggttaactccgtatattttcttttaaattaaagaga 35376619  T
Q  354 aatgatatttgtacaac 370  Q
    |||||||||||||||||    
T  35376618 aatgatatttgtacaac 35376602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 44383308 - 44383375
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||| |||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  44383308 ttctttataaaattttgattgtctcaaaagttgtcatataaatggatgttcaaataacacaactctta 44383375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 52326140 - 52326205
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||||||||||||||||||| ||||||||||||||| |||  ||||||||||||||||||||||    
T  52326140 ctttgtaaaattttgattgtcataaaagttgtcatatatatggatgttcaaataacacaactctta 52326205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 21217631 - 21217698
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||| |||||||||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  21217631 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctta 21217698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 37057009 - 37056942
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    ||||||||||||| ||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  37057009 ttctttgtaaaatattggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctta 37056942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 46624026 - 46624097
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactcttattta 72  Q
    |||||||||||||||||||||||||||||||| ||| ||  |||  ||||||||||||||||||||||||||    
T  46624026 ttctttgtaaaattttgattgtcacaaaagttatcacatgtatggatgttcaaataacacaactcttattta 46624097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 13348086 - 13348020
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||  ||||||||||||| |||||||    
T  13348086 ttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgttcaaataacataactctt 13348020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11630702 - 11630642
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacaca 61  Q
    |||||||||||||||| |||||| ||||| ||||||||||||||| |||||||||||||||    
T  11630702 ttctttgtaaaattttaattgtctcaaaaattgtcatataaatgaatgttcaaataacaca 11630642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 27541452 - 27541388
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||| |||||||||||||||||| ||| |||  |||||||||||||||||||||    
T  27541452 ctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 27541388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 23592577 - 23592640
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaact 64  Q
    |||||| |||||||||| ||||| ||||||||||||||||||||  ||||||||||||||||||    
T  23592577 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 23592640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 23600712 - 23600775
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaact 64  Q
    |||||| |||||||||| ||||| ||||||||||||||||||||  ||||||||||||||||||    
T  23600712 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 23600775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 5114197 - 5114263
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||||||||||||||||||||||| |||| |||||| ||||||   |||||||||||||||||||||    
T  5114197 ttctttgtaaaattttgattgtcataaaaattgtcacataaatagatgttcaaataacacaactctt 5114263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 19149111 - 19149173
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||||||||||||||| |||||| ||| |||  |||||||||||||||||||    
T  19149111 ctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 19149173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 32924231 - 32924169
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||| |||||||||||||||||| ||| |||  |||||||||||||||||||    
T  32924231 ctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 32924169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 35597283 - 35597344
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaact 64  Q
    ||||||||||||||| |||||||||||||||||| ||| |||| | ||||||||||||||||    
T  35597283 ctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatattcaaataacacaact 35597344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 41309236 - 41309301
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||||||||||||||||||||||||||||||| ||  ||| |||  ||||||||||||||||||||    
T  41309236 ttctttgtaaaattttgattgtcacaaaagttatcgcatatatggatgttcaaataacacaactct 41309301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 14226657 - 14226593
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||||||||||||||||||||||  |||| |||| | |||| |||||||||||||||||||||||    
T  14226657 ttctttgtaaaattttgattgtcttaaaaattgttacataattgattgttcaaataacacaactc 14226593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 35201386 - 35201323
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaact 64  Q
    ||||||||| |||||| |||||| ||||||||||||| ||||||  ||||||||||||||||||    
T  35201386 ttctttgtataattttaattgtctcaaaagttgtcatttaaatggatgttcaaataacacaact 35201323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 42358588 - 42358529
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaa 62  Q
    ||||| |||||||||||||||||||||||||||| ||| |||  ||||||||||||||||    
T  42358588 ctttgcaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaa 42358529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 52939772 - 52939835
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    ||||||||||||||| ||||||| |||||||||| ||| |||  ||||||||||||||||||||    
T  52939772 ctttgtaaaattttggttgtcacgaaagttgtcacatatatggatgttcaaataacacaactct 52939835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 55151667 - 55151604
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||||||||||||| ||||| ||||||||||||| ||| || | ||||||||||||||||||||    
T  55151667 ctttgtaaaattttaattgtaacaaaagttgtcacatatataaatgttcaaataacacaactct 55151604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 13735851 - 13735913
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||| ||||||||| |||||||||||||||||| ||| |||  |||||||||||||||||||    
T  13735851 ctttgcaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 13735913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 16969516 - 16969454
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||  |||||||||||||||||| ||| |||  |||||||||||||||||||    
T  16969516 ctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 16969454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 25641535 - 25641469
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||| ||||||| |||| ||||| ||||||||||||||||||||  ||||||||||| |||||||||    
T  25641535 ttctatgtaaaactttggttgtctcaaaagttgtcatataaatggatgttcaaataatacaactctt 25641469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 42357034 - 42356972
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||| ||||||||||| |||||| ||| |||  |||||||||||||||||||    
T  42357034 ctttgtaaaattttggttgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 42356972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 44413345 - 44413283
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||||||||||||| ||||||||||||||||||| ||| ||   |||||||||||||||||||    
T  44413345 ctttgtaaaattttaattgtcacaaaagttgtcacatatatagatgttcaaataacacaactc 44413283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 36670963 - 36670902
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||||||||||||| |||||||||||||| ||| ||| |||  |||||||||||||||||||    
T  36670963 tttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaataacacaactc 36670902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 44813257 - 44813322
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    ||||||||||||||||||| |||||||||||||| ||| ||   ||||||||| ||||||||||||    
T  44813257 ctttgtaaaattttgattgccacaaaagttgtcacatatatagatgttcaaatcacacaactctta 44813322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 31157627 - 31157563
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||||| |||||| ||||| ||| ||| |||  |||||||||||||||||||||    
T  31157627 ctttgtaaaattttgatagtcacagaagttatcacatatatggatgttcaaataacacaactctt 31157563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 33939367 - 33939423
Alignment:
Q  11 aattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||| |||||||||||||||||| ||| |||  |||||||||||||||||||||    
T  33939367 aattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 33939423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 37302667 - 37302731
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||| |||||||||||||||||||||||||||| ||  |||  ||||||||||| |||||||||    
T  37302667 ctttgcaaaattttgattgtcacaaaagttgtcaaatgtatggatgttcaaataagacaactctt 37302731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 38926749 - 38926813
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||| ||||||| |||||||||| ||| ||   |||||||||||||||||||||    
T  38926749 ctttgtaaaattttggttgtcacgaaagttgtcacatatatagatgttcaaataacacaactctt 38926813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 44856074 - 44856138
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||| |||||| | ||||||||| ||| |||  |||||||||||||||||||||    
T  44856074 ctttgtaaaattttggttgtcatacaagttgtcacatatatggatgttcaaataacacaactctt 44856138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 28539692 - 28539629
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaact 64  Q
    ||||||| ||||||||| || ||||||||||| |||| ||||||  ||||||||||||||||||    
T  28539692 ttctttgcaaaattttggttatcacaaaagttatcatctaaatggatgttcaaataacacaact 28539629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 37503697 - 37503630
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactcttatt 70  Q
    ||||| ||||||||| |||||||||||||| ||| ||| || | ||||||||||||||||||| ||||    
T  37503697 ctttgcaaaattttggttgtcacaaaagttatcacatatataaatgttcaaataacacaactcatatt 37503630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 44463476 - 44463543
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||||||||||||||||| || |||||||| |||||||| |   ||||||||||||||||| ||||    
T  44463476 ttctttgtaaaattttgattatctcaaaagttatcatataatttgatgttcaaataacacaacactta 44463543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 5244350 - 5244408
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacaca 61  Q
    ||||||||||||||| ||||||||||| |||||| ||| || | |||||||||||||||    
T  5244350 ctttgtaaaattttggttgtcacaaaaattgtcacatatataaatgttcaaataacaca 5244408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 7934095 - 7934157
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||  ||||||||||| |||||| ||| |||  |||||||||||||||||||    
T  7934095 ctttgtaaaattttagttgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 7934157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 24256721 - 24256660
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaat-gattgttcaaataacacaact 64  Q
    |||||||||||||| ||||||||||||||||||| ||| || |||| ||||||||||||||||    
T  24256721 ctttgtaaaattttaattgtcacaaaagttgtcacatatatagatt-ttcaaataacacaact 24256660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 46966052 - 46965986
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||| || ||||||||  ||||||||||| | ||||| |||||||||||||||| |||||    
T  46966052 ttctttgtaaatttatgattgtccgaaaagttgtcacacaaatggttgttcaaataacacacctctt 46965986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 47472450 - 47472512
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||| |||||||||||||||||| ||| ||   ||||||||||||| |||||    
T  47472450 ctttgtaaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacataactc 47472512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 288848 - 288909
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||||||| |||| |||||||| ||| |||  | |||||||||||||||||    
T  288848 tttgtaaaattttgattgttacaatagttgtcacatatatggattttcaaataacacaactc 288909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 6178351 - 6178311
Alignment:
Q  27 aaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  6178351 aaagttgtcataaaaatggttgttcaaataacacaactctt 6178311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 11075310 - 11075258
Alignment:
Q  19 ttgtcacaaaagttgtcatataaatgattgttcaaataacacaactcttattt 71  Q
    ||||| |||||||||||||| ||||| |||||||||||||| |||||| ||||    
T  11075310 ttgtctcaaaagttgtcatacaaatggttgttcaaataacataactctaattt 11075258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 12762641 - 12762581
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacaca 61  Q
    ||||||||||| || || ||||| || || ||||||| |||||||||||||||||||||||    
T  12762641 ttctttgtaaatttatggttgtcccataaattgtcatgtaaatgattgttcaaataacaca 12762581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 42997404 - 42997464
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacaca 61  Q
    |||||| || ||||||| |||||  |||||||||||||||||||| |||| ||||||||||    
T  42997404 ttctttatacaattttggttgtcttaaaagttgtcatataaatgaatgtttaaataacaca 42997464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 51982218 - 51982285
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||| |||||||||  ||||| ||||| |||| |||||||||  | ||||||||||||||||||||    
T  51982218 ttctttataaaattttagttgtctcaaaaattgttatataaatggattttcaaataacacaactctta 51982285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 52254088 - 52254025
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    ||||||||||||||  ||||||||||| |||||| ||| |||  ||||||||| ||||||||||    
T  52254088 ctttgtaaaattttagttgtcacaaaaattgtcacatatatggatgttcaaatgacacaactct 52254025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 7668132 - 7668074
Alignment:
Q  9 aaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||| |||||||||||||||||| ||  |||  |||||||||||||||| ||||    
T  7668132 aaaattttggttgtcacaaaagttgtcacatgtatggatgttcaaataacacaattctt 7668074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 8847232 - 8847289
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaa 62  Q
    ||||||||||||||||| ||||||||||||| | ||| |||  ||||||||||||||||    
T  8847232 tttgtaaaattttgattatcacaaaagttgt-acatatatggatgttcaaataacacaa 8847289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 26014933 - 26014995
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||| |||||||||||||||||| ||  ||   |||| ||||||||||||||    
T  26014933 ctttgtaaaattttggttgtcacaaaagttgtcacatgtatagatgtttaaataacacaactc 26014995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 37035459 - 37035417
Alignment:
Q  19 ttgtcacaaaagttgtcatataaatgattgttcaaataacaca 61  Q
    |||||||||||||| ||||  ||||||||||||||||||||||    
T  37035459 ttgtcacaaaagttatcattcaaatgattgttcaaataacaca 37035417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 41670518 - 41670468
Alignment:
Q  16 tgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||||||||||||||||||||   ||||| |||||||||||||||| ||||    
T  41670518 tgattgtcacaaaagttgtcactcaaatggttgttcaaataacacatctct 41670468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 46965961 - 46965895
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||| || ||||||||  ||||||||||| | ||||  |||||||||||||||| |||||    
T  46965961 ttctttgtaaatttatgattgtcctaaaagttgtcacacaaattgttgttcaaataacacatctctt 46965895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 69
Target Start/End: Original strand, 9311199 - 9311228
Alignment:
Q  40 aaatgattgttcaaataacacaactcttat 69  Q
    ||||||||||||||||||||||||||||||    
T  9311199 aaatgattgttcaaataacacaactcttat 9311228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 20547940 - 20547907
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtca 36  Q
    ||||||||||||||| ||||||||||||||||||    
T  20547940 ctttgtaaaattttggttgtcacaaaagttgtca 20547907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 33791705 - 33791668
Alignment:
Q  30 gttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||||||||||||||  |||||||||||||||||||||    
T  33791705 gttgtcatataaatggatgttcaaataacacaactctt 33791668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39629790 - 39629729
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaa 62  Q
    |||||| |||||||||| || |   ||||||||||| |||| ||||||||||||||||||||    
T  39629790 ttctttataaaattttggttatactaaaagttgtcacataattgattgttcaaataacacaa 39629729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 39630569 - 39630504
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||||||||||||||||||||||  |||| || | ||||||||   ||||||||||||| ||||||    
T  39630569 ttctttgtaaaattttgattgtcttaaaaattattatataaatagatgttcaaataacaaaactct 39630504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 45205413 - 45205466
Alignment:
Q  18 attgtcacaaaagttgtcatataaatgattgttcaaataacacaactcttattt 71  Q
    |||||| |||||||||||| | ||||| |||||||||||| ||| |||||||||    
T  45205413 attgtctcaaaagttgtcacacaaatggttgttcaaataatacacctcttattt 45205466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 11056867 - 11056823
Alignment:
Q  19 ttgtcacaaaagttgtcatataaatgattgttcaaataacacaac 63  Q
    ||||| |||||||||| ||| ||||| ||||||||||||||||||    
T  11056867 ttgtctcaaaagttgttatacaaatggttgttcaaataacacaac 11056823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 19960586 - 19960522
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||| |||||||| || ||||| ||||||||||||   ||||||||  ||||||||||||||||    
T  19960586 ttcttcgtaaaattatgtttgtctcaaaagttgtcaatcaaatgattaatcaaataacacaactc 19960522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 23770679 - 23770631
Alignment:
Q  19 ttgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||||||   ||||| |||||||||||||||| |||||    
T  23770679 ttgtcacaaaagttgtcactcaaatggttgttcaaataacacatctctt 23770631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34532308 - 34532368
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacaca 61  Q
    |||||||||||  | || |||||||| || || |||| |||||||||||||||||||||||    
T  34532308 ttctttgtaaatatatggttgtcacataaattatcatgtaaatgattgttcaaataacaca 34532368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 42889104 - 42889168
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||||| || |  ||||||||||||| |||||   |||| ||||||||||||||    
T  42889104 ttctttgtaaaattttggttatatcaaaagttgtcatctaaatagatgtttaaataacacaactc 42889168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 51305493 - 51305453
Alignment:
Q  26 aaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    ||||||||||||| ||||||||||||||||| || ||||||    
T  51305493 aaaagttgtcataaaaatgattgttcaaatatcataactct 51305453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 4e-20; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 31088303 - 31088373
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactcttatttaaa 74  Q
    |||||||||||||| |||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||    
T  31088303 tttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttatttaaa 31088373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 45121431 - 45121363
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactcttattt 71  Q
    ||||||||||||||| |||||||||||||||||| ||| |||  |||||||||||||||||||||||||    
T  45121431 ctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttattt 45121363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 46907314 - 46907381
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||| |||||||||||||||| ||||||||||| ||||||||  ||||||||||||||||||||||    
T  46907314 ttctttataaaattttgattgtctcaaaagttgtcgtataaatggatgttcaaataacacaactctta 46907381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9566912 - 9566846
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||| |||||||||||| ||||| ||||||||||||||||| ||| |||||||||||||||||||||    
T  9566912 ttctatgtaaaattttggttgtctcaaaagttgtcatataattgaatgttcaaataacacaactctt 9566846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 21401517 - 21401583
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||||||||||  |||||||||||| |||||||  |||||||||||||||||||||    
T  21401517 ttctttgtaaaattttgattgtttcaaaagttgtcacataaatggatgttcaaataacacaactctt 21401583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 48470760 - 48470822
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||||||||||||||||||||||||||||||||| ||| |||  |||||||||||||||||||    
T  48470760 ctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 48470822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 27465007 - 27464942
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    ||||||||||||||| |||||||||||||||||| ||| |||  ||||||||||||||||||||||    
T  27465007 ctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctta 27464942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 19947696 - 19947632
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||||| |||||||||| ||||| ||||||||||||||||||| | |||||||||||||||||||    
T  19947696 ttctttataaaattttggttgtctcaaaagttgtcatataaataaatgttcaaataacacaactc 19947632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 19055709 - 19055638
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactcttatttaaa 74  Q
    ||||||||||||||  |||||||||||||||||| ||| |||  ||||||||||||||||||||| ||||||    
T  19055709 ctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttttttaaa 19055638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 26021025 - 26020970
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataaca 59  Q
    |||||||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  26021025 tttgtaaaattttgattgtctcaaaagatgtcatataaatgaatgttcaaataaca 26020970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 30570643 - 30570706
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaact 64  Q
    ||||||||||||||||||||||  ||||| || |||||||||||| ||||||||||||||||||    
T  30570643 ttctttgtaaaattttgattgtttcaaaaattatcatataaatgaatgttcaaataacacaact 30570706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 33100929 - 33100992
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||| |||||||||| |||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  33100929 ctttataaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactct 33100992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 50149065 - 50149131
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatat-aaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||||||||||  ||||||||||||||| |||||| |||||||||||||||||||||    
T  50149065 ttctttgtaaaattttgattgttgcaaaagttgtcatataaaatga-tgttcaaataacacaactctt 50149131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 26469480 - 26469542
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||| |||||||||||||||||| ||| |||  |||||||||||||||||||    
T  26469480 ctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 26469542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 43775325 - 43775391
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||||||||||||||||||||||| ||||||||||| ||| |||| | |||||||||||||| ||||    
T  43775325 ttctttgtaaaattttgattgtcataaaagttgtcacatatatgaatattcaaataacacaagtctt 43775391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 44519101 - 44519039
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||| || ||||||||||||||| ||| |||| |||||||||||||||||||    
T  44519101 ctttgtaaaattttggttatcacaaaagttgtcacatatatgaatgttcaaataacacaactc 44519039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 649890 - 649954
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||| |||||||||||||||||| |||  ||  |||||||||||||||||||||    
T  649890 ctttgtaaaattttggttgtcacaaaagttgtcacatatgtggatgttcaaataacacaactctt 649954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 3981978 - 3981914
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||||||||||||||||||||||||||| ||||||| ||  |||  |||||||||||||||||||    
T  3981978 ttctttgtaaaattttgattgtcacaaatgttgtcacatttatggatgttcaaataacacaactc 3981914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 52576252 - 52576188
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatg-attgttcaaataacacaactct 66  Q
    ||||||||||||||| ||||||||||||||||||  || ||| ||||||||||||||||||||||    
T  52576252 ctttgtaaaattttggttgtcacaaaagttgtcacctatatgaattgttcaaataacacaactct 52576188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 18434914 - 18434980
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaat-gattgttcaaataacacaactctt 67  Q
    ||||||| ||||||||| ||||||||||||||||||| ||||| |||| |||||||||||||||||||    
T  18434914 ttctttgcaaaattttggttgtcacaaaagttgtcatctaaatagatt-ttcaaataacacaactctt 18434980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 30467485 - 30467418
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||||||||| |||  ||||||||||||||||||||||| |   ||||||||||||||||||||||    
T  30467485 ttctttgtaaaactttagttgtcacaaaagttgtcatataattagatgttcaaataacacaactctta 30467418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 2571762 - 2571819
Alignment:
Q  8 taaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||||||||| |||||||||||||||||||||  |||  |||||||||||||||||||    
T  2571762 taaaattttggttgtcacaaaagttgtcatatgcatggatgttcaaataacacaactc 2571819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 48103315 - 48103250
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaat-gattgttcaaataacacaactc 65  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| |||  |||||||| ||||||||    
T  48103315 ttctttgtaaaattttggttgtctcaaaagttgtcatataaatagatgtttcaaatatcacaactc 48103250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 2269517 - 2269457
Alignment:
Q  8 taaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||||||| ||||  ||||||||||||||||| ||| | ||||||||||||||||||||    
T  2269517 taaaattttggttgtatcaaaagttgtcatataattgaatattcaaataacacaactctta 2269457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 23645532 - 23645596
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||| |||||||||||||||| | ||| |||  ||||||||||||| |||||||    
T  23645532 ctttgtaaaattttggttgtcacaaaagttgttacatatatgtatgttcaaataacataactctt 23645596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 37274983 - 37274919
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||| |||||||||||||||||||||||||||| ||  | |  |||||||||||||||||||||    
T  37274983 ctttgcaaaattttgattgtcacaaaagttgtcacatgtaaggatgttcaaataacacaactctt 37274919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 6809706 - 6809757
Alignment:
Q  8 taaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataaca 59  Q
    |||||||||| ||||| ||||||||||||||||||||  |||||||||||||    
T  6809706 taaaattttggttgtcccaaaagttgtcatataaatggatgttcaaataaca 6809757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 31827073 - 31827135
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||||||||||||| ||||  ||||||||||||| |||||   ||||||||||||||||||||    
T  31827073 tttgtaaaattttggttgtatcaaaagttgtcatctaaatagatgttcaaataacacaactct 31827135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 35369821 - 35369879
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacaca 61  Q
    |||| |||||||||| |||||||||||||||||| ||| |||  |||||||||||||||    
T  35369821 ctttataaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacaca 35369879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 45640420 - 45640486
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||||| |||  ||||||||||||| ||| ||   |||||||||||||||||||||    
T  45640420 ttctttgtaaaattttggttgcaacaaaagttgtcacatatatagatgttcaaataacacaactctt 45640486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 49647096 - 49647038
Alignment:
Q  8 taaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||||||||  ||||  ||||||||||||||||||||| ||||||||||||| ||||||    
T  49647096 taaaattttagttgtttcaaaagttgtcatataaatgaatgttcaaataacataactct 49647038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 25672461 - 25672526
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||||||||||||||||||| |  |||||||| ||||||||||  ||||||| |||| ||||||||    
T  25672461 ttctttgtaaaattttgattatatcaaaagttatcatataaatagttgttcagataatacaactct 25672526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 50775108 - 50775043
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||||||||||||| || ||||||||||| ||||||   ||||| | |||||||||||||||||||    
T  50775108 ttctttgtaaaattatggttgtcacaaaatttgtcaatcaaatggtcgttcaaataacacaactct 50775043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 26207960 - 26208024
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||| |||||||||||| ||||||||||| | || |||||   |||||||||||||||||||    
T  26207960 ttctttgcaaaattttgattatcacaaaagttataatctaaatagatgttcaaataacacaactc 26208024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 34974762 - 34974722
Alignment:
Q  28 aagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    ||||||||| |||||||||||||||||||||||| ||||||    
T  34974762 aagttgtcacataaatgattgttcaaataacacacctctta 34974722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 50726200 - 50726136
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||| ||||||||| ||||||||||| || ||| ||| |||  |||||||||||||||||||    
T  50726200 ttctttgcaaaattttggttgtcacaaaaattatcacatatatggatgttcaaataacacaactc 50726136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 50932425 - 50932481
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataaca 59  Q
    ||||||||||||||| |||| ||||||||||||| ||| |||  |||||||||||||    
T  50932425 ctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaataaca 50932481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 51571298 - 51571234
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||||||||||||| || ||||| ||||| ||||||   ||||| ||||||||||||||||||||    
T  51571298 ttctttgtaaaattatggttgtcccaaaaattgtcaatcaaatggttgttcaaataacacaactc 51571234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 8350142 - 8350087
Alignment:
Q  10 aaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||||||| ||||||| |||||||||| ||| |||  |||||||||||||||||||    
T  8350142 aaattttggttgtcacgaaagttgtcacatatatggatgttcaaataacacaactc 8350087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 8447856 - 8447914
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacac 60  Q
    ||||||||||| || ||||||||||| ||||| |||  ||||||||||||||||||||||    
T  8447856 ttctttgtaaa-ttatgattgtcacataagttatcaactaaatgattgttcaaataacac 8447914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 29359773 - 29359812
Alignment:
Q  30 gttgtcatataaatgattgttcaaataacacaactcttat 69  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  29359773 gttgtcatatatatgaatgttcaaataacacaactcttat 29359812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 30735243 - 30735180
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||| |||||||||||||||||||||| || ||| ||| |||  | ||||||||||||||||||    
T  30735243 ctttataaaattttgattgtcacaaaaattatcacatacatggatattcaaataacacaactct 30735180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 44914522 - 44914459
Alignment:
Q  3 ctttgtaaaattttgattgtcac-aaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||||||||| | |||| |||||| ||| |||  |||||||||||||||||||    
T  44914522 ctttgtaaaattttgattgtcgcaaaaaattgtcacatatatggatgttcaaataacacaactc 44914459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 15470006 - 15469945
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||| ||||||||| |||||||||||| || ||| ||| |||| |||||||||||||||||||    
T  15470006 ctttataaaattttaattgtcacaaaa-ttatcacatatatgaatgttcaaataacacaactc 15469945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 37619665 - 37619727
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||| |||| | ||||||||||| ||| |||  ||||||||||||| |||||    
T  37619665 ctttgtaaaattttggttgtaataaaagttgtcacatatatggatgttcaaataacataactc 37619727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 37685451 - 37685512
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||| |||||||||||| || ||| ||  |||| ||||||||||||| |||||    
T  37685451 tttgtaaaattttaattgtcacaaaaattatcacatgtatgaatgttcaaataacataactc 37685512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 37700067 - 37700006
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||| |||||||||||| || ||| ||  |||| ||||||||||||| |||||    
T  37700067 tttgtaaaattttaattgtcacaaaaattatcacatgtatgaatgttcaaataacataactc 37700006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 41451774 - 41451807
Alignment:
Q  28 aagttgtcatataaatgattgttcaaataacaca 61  Q
    ||||||||||||||||| ||||||||||||||||    
T  41451774 aagttgtcatataaatggttgttcaaataacaca 41451807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 45333441 - 45333486
Alignment:
Q  25 caaaagttgtcatataaatgattgttcaaataacacaactcttatt 70  Q
    ||||||||||||   |||| ||||||||||||||||||||||||||    
T  45333441 caaaagttgtcaatcaaataattgttcaaataacacaactcttatt 45333486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 1821043 - 1820991
Alignment:
Q  16 tgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    ||||||||||| ||||||||||| |||  ||||||||||| ||||| ||||||    
T  1821043 tgattgtcacataagttgtcatacaaacaattgttcaaatcacacacctctta 1820991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 3851279 - 3851335
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataaca 59  Q
    |||| |||||||||| |||||| ||||||||||| ||| |||  |||||||||||||    
T  3851279 ctttataaaattttggttgtcataaaagttgtcacatatatggatgttcaaataaca 3851335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29706655 - 29706595
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacaca 61  Q
    ||||||||||| || || || ||  ||||||||||| | ||||||||||||||||||||||    
T  29706655 ttctttgtaaatttatggttatcttaaaagttgtcacagaaatgattgttcaaataacaca 29706595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 49660317 - 49660369
Alignment:
Q  19 ttgtcacaaaagttgtcatataaatgattgttcaaataacacaactcttattt 71  Q
    ||||||||||||||||||   || ||||||||||||||||||| |||| ||||    
T  49660317 ttgtcacaaaagttgtcactcaattgattgttcaaataacacacctctaattt 49660369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 1671663 - 1671728
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||||||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||    
T  1671663 ctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactctta 1671728  T

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Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 5168302 - 5168367
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    ||||||||||||||||  |||||||||||||||||||||| |||| ||||||||||||||||||||    
T  5168302 ttctttgtaaaattttagttgtcacaaaagttgtcatatatatgaatgttcaaataacacaactct 5168367  T

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Target: chr5; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 7287141 - 7287077
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||| |||||||||||||||||||    
T  7287141 ttctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 7287077  T

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Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 17626105 - 17626172
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||| |||||||||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  17626105 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctta 17626172  T

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Target: chr5; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 7552919 - 7552853
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||| ||||||||| ||||||||||||||||||| ||||||  |||||||||||||||||||||    
T  7552919 ttctttgcaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaactctt 7552853  T

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Target: chr5; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 13168643 - 13168704
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaact 64  Q
    |||||||||||||||||||||||||||||||||| ||| |||| |||| |||||||||||||    
T  13168643 ctttgtaaaattttgattgtcacaaaagttgtcacatatatgaatgttgaaataacacaact 13168704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 26791194 - 26791129
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    ||||||||||||||| |||||||||||||||||| ||| |||  ||||||||||||||||||||||    
T  26791194 ctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctta 26791129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 18258743 - 18258679
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||| |||||||||||||||||| ||| |||  |||||||||||||||||||||    
T  18258743 ctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 18258679  T

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Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 28306084 - 28306020
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||  |||||||||||||||||||    
T  28306084 ttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 28306020  T

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Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 39054706 - 39054774
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactcttat 69  Q
    ||||||| |||||||||||| |||||||||||||||| ||||||  ||||||||||||||||| |||||    
T  39054706 ttctttgcaaaattttgattatcacaaaagttgtcatctaaatggatgttcaaataacacaacgcttat 39054774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 8687010 - 8687076
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||||||||||||||||||||| | ||||||||||| ||| |||| |||||||||||||| ||||||    
T  8687010 ttctttgtaaaattttgattgttataaaagttgtcacatatatgaatgttcaaataacactactctt 8687076  T

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Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 22972236 - 22972302
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||||  ||||| |||||||||| |||||||||  |||||||||||||||||||||    
T  22972236 ttctttgtaaaattttagttgtctcaaaagttgttatataaatggatgttcaaataacacaactctt 22972302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 33037641 - 33037703
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||| |||||||||||||||||| ||| |||  |||||||||||||||||||    
T  33037641 ctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 33037703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 39591799 - 39591865
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||||||||||| |||| |||||||||| ||||||||||||||   |||||||||||||||||||||    
T  39591799 ttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaataacacaactctt 39591865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 39592191 - 39592257
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||||||||||| |||| |||||||||| ||||||||||||||   |||||||||||||||||||||    
T  39592191 ttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaataacacaactctt 39592257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 1764345 - 1764406
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaact 64  Q
    |||| |||||||||| |||||||||||||||||| ||| |||| ||||||||||||||||||    
T  1764345 ctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaact 1764406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 7076518 - 7076464
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataa 57  Q
    ||||||||||||||| |||||||||||||||||| ||| |||| |||||||||||    
T  7076518 ctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataa 7076464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 13310002 - 13310068
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||||||||||| |||||||||| ||||| ||||||| ||||||  |||||||||||||||| ||||    
T  13310002 ttctttgtaaaaatttgattgtctcaaaaattgtcatctaaatggatgttcaaataacacaattctt 13310068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 15479591 - 15479652
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||| ||||||||||||||||||| ||  |||  |||||||||||||||||||    
T  15479591 tttgtaaaattttaattgtcacaaaagttgtcacatttatggatgttcaaataacacaactc 15479652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 2972452 - 2972504
Alignment:
Q  10 aaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaa 62  Q
    ||||||||||||||||||||||||||| ||| || | ||||||||||||||||    
T  2972452 aaattttgattgtcacaaaagttgtcacatatataaatgttcaaataacacaa 2972504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 28467403 - 28467339
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||| |||||||||| ||||||||||| |||||| ||| |||| |||||| ||||||||||||||    
T  28467403 ctttataaaattttggttgtcacaaaaattgtcacatatatgaatgttcagataacacaactctt 28467339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 36739070 - 36739134
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||||||||||| ||||||||||| || ||| ||| |||  ||||||||||||||||||||||    
T  36739070 tttgtaaaattttggttgtcacaaaaattatcacatatatggatgttcaaataacacaactctta 36739134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 35634785 - 35634722
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    ||||||||||||||| || ||| ||||||||||| ||| |||  ||||||||||||||||||||    
T  35634785 ctttgtaaaattttggttatcataaaagttgtcacatatatggatgttcaaataacacaactct 35634722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 41321376 - 41321438
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||| ||||||||||| |||||| ||| |||  | |||||||||||||||||    
T  41321376 ctttgtaaaattttggttgtcacaaaaattgtcacatatatggatattcaaataacacaactc 41321438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 1274479 - 1274543
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    ||||||||||||||| ||| || ||||||||||| ||| |||  ||||||||||||||||||||||    
T  1274479 ctttgtaaaattttggttg-cataaaagttgtcacatatatggatgttcaaataacacaactctta 1274543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 3565203 - 3565268
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    ||||||||||||||||| ||||| ||||||||||||   || ||  ||||||||||||||||||||    
T  3565203 ttctttgtaaaattttggttgtctcaaaagttgtcactcaagtggatgttcaaataacacaactct 3565268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 14051267 - 14051202
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    ||||||||||||||||| |||||||||||||| ||| ||| |||  ||||  ||||||||||||||    
T  14051267 ttctttgtaaaattttggttgtcacaaaagttatcacatatatggatgtttgaataacacaactct 14051202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 42475617 - 42475557
Alignment:
Q  8 taaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||| ||||||||||| || || || ||| ||||||| |||||||||||||||||||||||    
T  42475617 taaatttttgattgtcccataaattatcacataaatggttgttcaaataacacaactctta 42475557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 4088563 - 4088630
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||||||||| | ||||||||||| | ||||||| | ||||   ||||||||||||||||||||||    
T  4088563 ttctttgtaaaaatatgattgtcacataggttgtcaaaaaaatagatgttcaaataacacaactctta 4088630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 189646 - 189596
Alignment:
Q  10 aaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacac 60  Q
    ||||| |||||||| ||||||||||||   |||||||||||||||||||||    
T  189646 aaattatgattgtcccaaaagttgtcaaccaaatgattgttcaaataacac 189596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 21353263 - 21353329
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||||||||||||| || ||||| ||||||||||||   ||||| ||||| ||||||| ||||||||    
T  21353263 ttctttgtaaaattatggttgtcccaaaagttgtcaatcaaatggttgtttaaataactcaactctt 21353329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2429126 - 2429191
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||||||||||||| | |||||| ||||||||||||   |||||| |||||  |||||||||||||    
T  2429126 ttctttgtaaaattataattgtctcaaaagttgtcaatcaaatgactgttcgtataacacaactct 2429191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 5769201 - 5769144
Alignment:
Q  8 taaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||||||||||||||   |||| |||| | |||| |||||||||||||||||||||||    
T  5769201 taaaattttgattgtattaaaatttgttacataattgattgttcaaataacacaactc 5769144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 14923195 - 14923256
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||||||||||||| || |||| |||||||||| ||| ||   |||||||||||||||||||    
T  14923195 tttgtaaaattttggttttcacgaaagttgtcacatatatcgatgttcaaataacacaactc 14923256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 9742329 - 9742265
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||| |  ||||||||||||||||||||||  || || |||||||||||| ||| |||||    
T  9742329 ctttgtaaattagtgattgtcacaaaagttgtcattcaattggttgttcaaataatacacctctt 9742265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 44539855 - 44539920
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    ||||||||||||||| |||||||||||||||||| ||| |||| ||||||||||||||||||||||    
T  44539855 ctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactctta 44539920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 29175346 - 29175410
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||| |||||||||||||||||| ||| |||| |||||||||||||||||||||    
T  29175346 ctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactctt 29175410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 38382440 - 38382507
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||| |||||||||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  38382440 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctta 38382507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 47181960 - 47182027
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||| |||||||||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  47181960 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctta 47182027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 48402149 - 48402082
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||| |||||||||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  48402149 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctta 48402082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 19473908 - 19473842
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||||||||||| ||||||||||||||||||||  | |||||||||||||| ||||    
T  19473908 ttctttgtaaaattttgattgtctcaaaagttgtcatataaatgcatcttcaaataacacaaatctt 19473842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 26732344 - 26732410
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||  |||||||||||||||||||||    
T  26732344 ttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 26732410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 39440605 - 39440667
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||| ||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||    
T  39440605 ctttctaaaattttgattgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 39440667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 51986163 - 51986227
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||| |||||||||||||||||| ||| |||  |||||||||||||||||||||    
T  51986163 ctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 51986227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 34616680 - 34616747
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||| |||||||||| ||||| |||||||||||||||||||   ||||||||||||||||||||||    
T  34616680 ttctttataaaattttggttgtctcaaaagttgtcatataaatagatgttcaaataacacaactctta 34616747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 37297171 - 37297234
Alignment:
Q  5 ttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    ||||||||||||| |||||||||||||||||| ||| |||  ||||||||||||||||||||||    
T  37297171 ttgtaaaattttggttgtcacaaaagttgtcaaatatatggatgttcaaataacacaactctta 37297234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 56363997 - 56363930
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||| |||||||||| ||||| ||||||||||||| ||||||  ||||||||||||||||||||||    
T  56363997 ttctttataaaattttggttgtctcaaaagttgtcatgtaaatggatgttcaaataacacaactctta 56363930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 2575742 - 2575676
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||||||||||| |||  |||||||||||||||||||||||||   |||||||||||||||||||||    
T  2575742 ttctttgtaaaactttagttgtcacaaaagttgtcatataaatagatgttcaaataacacaactctt 2575676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 39195176 - 39195242
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||||||||||| ||||||| ||||||| ||||||||||||||   |||||||||||||||||||||    
T  39195176 ttctttgtaaaactttgattatcacaaatgttgtcatataaatagatgttcaaataacacaactctt 39195242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 43175105 - 43175167
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||||||||||||||||| ||||||||||||||| ||| |||  |||||||||||||||||||    
T  43175105 ctttgtaaaattttgattatcacaaaagttgtcacatatatggatgttcaaataacacaactc 43175167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 53801709 - 53801647
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||| |||||||||||||||||| ||| |||  |||||||||||||||||||    
T  53801709 ctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 53801647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 23369282 - 23369217
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||||| |||||| |||||||||||||||||| ||| |||  ||||||||||||||||||||||    
T  23369282 ctttgtaagattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctta 23369217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 27051038 - 27050973
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    ||||||||||||||||| |||||||||||||||||| ||  |||| ||||||||||||||| ||||    
T  27051038 ttctttgtaaaattttggttgtcacaaaagttgtcacatttatgaatgttcaaataacacatctct 27050973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 11068809 - 11068873
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||| ||| |||||||||||||| ||| |||| |||||||||||||||| ||||    
T  11068809 ctttgtaaaattttggttgccacaaaagttgtcacatatatgaatgttcaaataacacaattctt 11068873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 26492128 - 26492192
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||||||||||||||| |||||| ||| ||   |||||||||||||||||||||    
T  26492128 ctttgtaaaattttgattgtcacaaaaattgtcacatatatagatgttcaaataacacaactctt 26492192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 39478556 - 39478623
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    ||||||||||||||||| |||||||||||||||||||||| |||  |||| ||  |||||||||||||    
T  39478556 ttctttgtaaaattttggttgtcacaaaagttgtcatatatatggatgtttaataaacacaactctta 39478623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 10250467 - 10250401
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||||| |||||||||||||||||  ||| |||  |||||||||||||||| ||||    
T  10250467 ttctttgtaaaattttggttgtcacaaaagttgtcgcatatatggatgttcaaataacacaattctt 10250401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 3316476 - 3316529
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataa 57  Q
    |||||||||||||||||||| ||||||||||||| ||||||  |||||||||||    
T  3316476 tttgtaaaattttgattgtctcaaaagttgtcatctaaatggatgttcaaataa 3316529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 42853696 - 42853765
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactcttatt 70  Q
    |||||| |||||||||||||||| ||||| ||||||   |||||  ||||||||||||||||||||||||    
T  42853696 ttctttataaaattttgattgtctcaaaaattgtcactcaaatggatgttcaaataacacaactcttatt 42853765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 50831707 - 50831642
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||||||||||||| || ||||| ||||||||||||   ||||| |||||||||||||||||||||    
T  50831707 ttctttgtaaaattatggttgtcccaaaagttgtcaatcaaatggttgttcaaataacacaactct 50831642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 31641515 - 31641451
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||| |||||||||| |||||||||||||| |||  || |||| |||||||||||||||||||||    
T  31641515 ctttataaaattttggttgtcacaaaagttatcacgtatatgaatgttcaaataacacaactctt 31641451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 38376442 - 38376378
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||||||||||||||||| || ||| ||| ||   |||||||||||||||||||    
T  38376442 ttctttgtaaaattttgattgtcacaaaaattatcacatatatagatgttcaaataacacaactc 38376378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 49449092 - 49449036
Alignment:
Q  6 tgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaa 62  Q
    |||||||||||| |||||  |||||||||||||||||||| |||| |||||||||||    
T  49449092 tgtaaaattttggttgtcttaaaagttgtcatataaatgaatgtttaaataacacaa 49449036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 5233621 - 5233558
Alignment:
Q  2 tctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||||||||||||||||||||  |||||||||| | ||||||   |||||||||||||||||||    
T  5233621 tctttgtaaaattttgattgtttcaaaagttgttacataaatagatgttcaaataacacaactc 5233558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 15175667 - 15175729
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||| |||| ||||||||||||| ||| |||  ||||||||||| |||||||    
T  15175667 ctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaataatacaactc 15175729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 27965111 - 27965169
Alignment:
Q  8 taaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||||||||| |||||||| ||||||||| ||| |||  ||||||||||||||||||||    
T  27965111 taaaattttggttgtcacagaagttgtcacatatatggatgttcaaataacacaactct 27965169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 32866413 - 32866455
Alignment:
Q  25 caaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||||||||||||  ||||||||||||||||||||||||||||    
T  32866413 caaaagttgtcattaaaatgattgttcaaataacacaactctt 32866455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 24045916 - 24045977
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||| ||||||||||||||   ||||||||||| |||| || ||||||||||||||||||||    
T  24045916 tttgcaaaattttgattgtactaaaagttgtcacataattggttgttcaaataacacaactc 24045977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 39259080 - 39259137
Alignment:
Q  9 aaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||||||| |||||||||||| ||||||| ||||||  | ||||||||||||||||||    
T  39259080 aaaattttaattgtcacaaaaattgtcatctaaatggatattcaaataacacaactct 39259137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 54974615 - 54974656
Alignment:
Q  26 aaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||| ||||||||||||||||||||||||||||||| |||||    
T  54974615 aaaaattgtcatataaatgattgttcaaataacacatctctt 54974656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 1872728 - 1872792
Alignment:
Q  2 tctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||||||||| || |||||||| |||||||| ||||  | |||||||||||||||||||| ||||    
T  1872728 tctttgtaaatttatgattgtcccaaaagttatcatccagatgattgttcaaataacacatctct 1872792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 11672075 - 11672008
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaat-gattgttcaaataacacaactctta 68  Q
    |||||| ||||||||| | ||||||||||||||| |||||||| |||| ||||||||||||| ||||||    
T  11672075 ttctttataaaattttaagtgtcacaaaagttgtaatataaatagatt-ttcaaataacacatctctta 11672008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 31995867 - 31995804
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatata--aatgattgttcaaataacacaa 62  Q
    |||||| ||||||||| |||||| |||||||||| |||||  |||| |||||||||||||||||    
T  31995867 ttctttctaaaattttaattgtctcaaaagttgttatatataaatggttgttcaaataacacaa 31995804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 42491193 - 42491257
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||||||| ||||| || ||||| ||||||||||||   ||||| ||||||||||||||||||||    
T  42491193 ttctttgtgaaattatggttgtcccaaaagttgtcaatcaaatggttgttcaaataacacaactc 42491257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19232086 - 19232019
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    ||||||| ||||||||| ||||   |||| |||||| |||| || |||||||||||||||||||||||    
T  19232086 ttctttgcaaaattttggttgtactaaaaattgtcacataattggttgttcaaataacacaactctta 19232019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 24575801 - 24575742
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaa 62  Q
    |||| |||||||||| |||||||||||||||||| ||| ||   ||||||||||||||||    
T  24575801 ctttataaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacacaa 24575742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 26724922 - 26724859
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    ||||||||||||||  |||| ||||||||| ||| ||| |||  ||||||||||||||||||||    
T  26724922 ctttgtaaaattttagttgttacaaaagttatcacatatatggatgttcaaataacacaactct 26724859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 36178027 - 36178090
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||| |||||||||  |||||||||||||| ||| ||| || | ||||||||||||||||||||    
T  36178027 ctttataaaattttagttgtcacaaaagttatcacatatataaatgttcaaataacacaactct 36178090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 515573 - 515531
Alignment:
Q  25 caaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||||||| | | |||||||||||||||||||    
T  515573 caaaagttgtcatataaataaatattcaaataacacaactctt 515531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 7632410 - 7632349
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatat-aaatgattgttcaaataacacaactc 65  Q
    |||||||||||||| ||||  |||| |||||||||| |||||| |||||||||||||||||||    
T  7632410 tttgtaaaattttggttgttgcaaaggttgtcatataaaatga-tgttcaaataacacaactc 7632349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 10474064 - 10473998
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||| || || |||||| ||||||||| || ||||||| ||||||||| ||| |||||||    
T  10474064 ttctttgtaaatttatggttgtcataaaagttgtaatctaaatgagtgttcaaattacaaaactctt 10473998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 21777485 - 21777555
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactcttattt 71  Q
    |||||| |||||| |||||| ||  |||| || |||||||||| |||||| ||||||||||||||| ||||    
T  21777485 ttctttataaaatcttgattatctaaaaaattatcatataaataattgtttaaataacacaactctaattt 21777555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 38134474 - 38134528
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataa 57  Q
    ||||||||||||||| || ||||||||||||||| ||  |||| |||||||||||    
T  38134474 ctttgtaaaattttggttatcacaaaagttgtcacatgtatgaatgttcaaataa 38134528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 39654943 - 39655017
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactcttatttaaag 75  Q
    ||||||||||| || || |||||  |||| || |||| |||||  ||||||||||||||||||||||| ||||||    
T  39654943 ttctttgtaaatttatggttgtcttaaaaattatcatctaaatagttgttcaaataacacaactcttaattaaag 39655017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 45083091 - 45083149
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataaca 59  Q
    |||||| ||||||||||||||| | ||||||||||| ||| |||  |||||||||||||    
T  45083091 ttctttataaaattttgattgtaataaaagttgtcacatatatggatgttcaaataaca 45083149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 46038782 - 46038841
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaa 62  Q
    ||||||||||| || ||||| ||| ||||||||||  |||||| ||||||||||||||||||    
T  46038782 ttctttgtaaatttatgattatcataaaagttgtc--ataaataattgttcaaataacacaa 46038841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 46213091 - 46213153
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||| |||| ||||||||| ||| ||| |||  | |||||||||||||||||    
T  46213091 ctttgtaaaattttggttgttacaaaagttttcacatatatggattttcaaataacacaactc 46213153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 50721696 - 50721631
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatat-aaatgattgttcaaataacacaactct 66  Q
    ||||||||||||||||  ||||  |||| |||||||||| |||||| ||||||||||||||||||||    
T  50721696 ttctttgtaaaattttagttgttgcaaaggttgtcatataaaatga-tgttcaaataacacaactct 50721631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 55601659 - 55601594
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||| ||||| |||||| | ||||||||| | || |||||||||||||||||| ||||||    
T  55601659 ttctttgtaaa-ttttggttgtcaaataagttgtcacaaaattgattgttcaaataacactactctt 55601594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19174726 - 19174661
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    ||||||||||| || || ||||| |||||||||||| | || || |||||||||||||||| ||||    
T  19174726 ttctttgtaaatttatgtttgtctcaaaagttgtcacacaattggttgttcaaataacacatctct 19174661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21025721 - 21025786
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    ||||||||||| |  || ||||||||||||||||||   || ||||||||||||||||||| ||||    
T  21025721 ttctttgtaaattagtggttgtcacaaaagttgtcactcaattgattgttcaaataacacacctct 21025786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 35936110 - 35936151
Alignment:
Q  26 aaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||| | |||||||||||||||||||||| |||||    
T  35936110 aaaagttgtcacacaaatgattgttcaaataacacacctctt 35936151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 14603576 - 14603636
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacaca 61  Q
    |||||| |||| || || ||||| ||||| |||||||  ||||||||||||||||||||||    
T  14603576 ttctttataaatttatggttgtctcaaaaattgtcatggaaatgattgttcaaataacaca 14603636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 24990234 - 24990290
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataa 57  Q
    ||||||||||| || || ||||| || ||||||||||| |||||||| |||||||||    
T  24990234 ttctttgtaaatttatggttgtcccataagttgtcatacaaatgattattcaaataa 24990290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 46283058 - 46283109
Alignment:
Q  10 aaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaa 62  Q
    ||||||| |||||| ||||||||||||||||||||  |||| |||||||||||    
T  46283058 aaattttaattgtctcaaaagttgtcatataaatggatgtt-aaataacacaa 46283109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 47744465 - 47744397
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtca-tataaatgattgttcaaataacacaactctta 68  Q
    |||||||||||||| || ||||| |||||||| ||| |  ||||  |||||||||||||||||||||||    
T  47744465 ttctttgtaaaattatggttgtcccaaaagttatcaatcaaaatagttgttcaaataacacaactctta 47744397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 27490682 - 27490617
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||||||||||||||||||||||||||||||||||||  |||||  ||||||||||||||||||||    
T  27490682 ttctttgtaaaattttgattgtcacaaaagttgtcatcaaaatggatgttcaaataacacaactct 27490617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 22888767 - 22888703
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||||||||||||||||||||||||||||||||| ||| |||  |||||||||||||||||||||    
T  22888767 ctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 22888703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 3097813 - 3097746
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||| |||||||||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  3097813 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctta 3097746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 1248807 - 1248875
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactcttattt 71  Q
    |||||||||||||| ||| ||||||||||||||| ||| |||  |||||||||||||||||||||||||    
T  1248807 ctttgtaaaattttaattatcacaaaagttgtcacatatatggatgttcaaataacacaactcttattt 1248875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 18254159 - 18254095
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||| |||||||||||||||||| ||| |||  |||||||||||||||||||||    
T  18254159 ctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 18254095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 32477453 - 32477517
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||||| |||||||| |||||||||||||||||| ||| |||| |||||||||||||||||||||    
T  32477453 ctttgtcaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactctt 32477517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 42421848 - 42421784
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||| |||||||||| |||||||||||||||||| ||| |||| |||||||||||||||||||||    
T  42421848 ctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactctt 42421784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 6049295 - 6049236
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaa 62  Q
    |||||||||||||||||||||||||||||||||| ||| |||  ||||||||||||||||    
T  6049295 ctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaa 6049236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 13333122 - 13333055
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||| |||||||||| ||||| |||||||||||||||||||   ||||||||||||||||||||||    
T  13333122 ttctttataaaattttggttgtctcaaaagttgtcatataaatcgatgttcaaataacacaactctta 13333055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 25270534 - 25270467
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||| |||||||||| ||||| | ||||||||||||||||||  ||||||||||||||||||||||    
T  25270534 ttctttataaaattttggttgtctcgaaagttgtcatataaatggatgttcaaataacacaactctta 25270467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 29349625 - 29349688
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaact 64  Q
    ||||||||||||||||||||||||||||||||||||| ||||||  |||| |||||||| ||||    
T  29349625 ttctttgtaaaattttgattgtcacaaaagttgtcatctaaatggatgttgaaataacataact 29349688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 41056699 - 41056636
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaact 64  Q
    |||||| |||||||||| ||||| ||||||||||||||||||||  ||||||||||||||||||    
T  41056699 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 41056636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 41195705 - 41195768
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    ||||||||||||||| |||||||||||||||| | ||| |||| ||||||||||||||||||||    
T  41195705 ctttgtaaaattttggttgtcacaaaagttgttacatatatgaatgttcaaataacacaactct 41195768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 1907715 - 1907650
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    ||||||||||| || || |||||| | |||||||||| ||||||||||||||||||||||||||||    
T  1907715 ttctttgtaaatttatggttgtcatacaagttgtcatctaaatgattgttcaaataacacaactct 1907650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 9647253 - 9647317
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||| |||||||||||||| ||  ||| |||| |||||||||||||||||||||    
T  9647253 ctttgtaaaattttggttgtcacaaaagttatcgcatatatgaatgttcaaataacacaactctt 9647317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 9990812 - 9990876
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||||||||||||| ||||||||||||||| ||| ||| |||  |||||||||||||||||||||    
T  9990812 ctttgtaaaattttaattgtcacaaaagttatcacatatatggatgttcaaataacacaactctt 9990876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 2076688 - 2076755
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    ||||||||||||||||| |||||||||||||||||| ||  ||   ||||||||||||||||||||||    
T  2076688 ttctttgtaaaattttggttgtcacaaaagttgtcacatctattgatgttcaaataacacaactctta 2076755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 8848649 - 8848582
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    ||||||| ||||||||||||||||||||| || |||| |||||   ||||||||||||||||||||||    
T  8848649 ttctttgcaaaattttgattgtcacaaaaattatcatctaaatagatgttcaaataacacaactctta 8848582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 9194363 - 9194426
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||||||||||||| ||||||||||| |||| | ||| |||| |||||||||||||||||||||    
T  9194363 tttgtaaaattttggttgtcacaaaaattgttacatatatgaatgttcaaataacacaactctt 9194426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 21611604 - 21611541
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||||||||||||| |||||| ||||||||||| ||| |||  |||||||||||||||||||||    
T  21611604 tttgtaaaattttggttgtcataaaagttgtcacatatatggatgttcaaataacacaactctt 21611541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 43487500 - 43487565
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    ||||||||||||||| |||| |||||| |||||| ||| |||  ||||||||||||||||||||||    
T  43487500 ctttgtaaaattttggttgttacaaaaattgtcacatatatggatgttcaaataacacaactctta 43487565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 28494979 - 28495042
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaact 64  Q
    |||| |||||| || || |||||||||||||||| || |||||| |||||||||||||||||||    
T  28494979 ttctgtgtaaatttatggttgtcacaaaagttgtaatttaaatggttgttcaaataacacaact 28495042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 37737921 - 37737858
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    ||||||||| ||||| |||||||||||||||||| ||| |||   |||||||||||||||||||    
T  37737921 ctttgtaaagttttggttgtcacaaaagttgtcacatatatggacgttcaaataacacaactct 37737858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 42434247 - 42434302
Alignment:
Q  10 aaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||||||||| ||| |||||||||||||||||||   |||||||||||||||||||    
T  42434247 aaattttgatcgtctcaaaagttgtcatataaatagatgttcaaataacacaactc 42434302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 3838830 - 3838768
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||||||||||||| ||| ||||||||||||||| ||| ||   |||||||||||||||||||    
T  3838830 ctttgtaaaattttaattatcacaaaagttgtcacatatatagatgttcaaataacacaactc 3838768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 9760145 - 9760203
Alignment:
Q  9 aaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||| |||||||||||||||||| ||| ||   |||||||||||||||||||||    
T  9760145 aaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacacaactctt 9760203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 17767979 - 17767929
Alignment:
Q  18 attgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||| ||||||||||| || |||||| ||||||||||||||||||||||    
T  17767979 attgtctcaaaagttgtcgtaaaaatgaatgttcaaataacacaactctta 17767929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 18846733 - 18846795
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||| |||||||||||||||| |||| ||||||| ||||||  ||||||||||||| ||||||    
T  18846733 tttgcaaaattttgattgtcataaaaattgtcatctaaatggatgttcaaataacataactct 18846795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 7664018 - 7663954
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    ||||||||||| || || |||||| |||| ||||||  ||||||||||||||||||||||||||||    
T  7664018 ttctttgtaaatttatggttgtcataaaa-ttgtcacctaaatgattgttcaaataacacaactct 7663954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 32701212 - 32701273
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||||||| || || ||| | |||||||| ||||||||||| ||||||||||||||||||||    
T  32701212 tttgtaaacttatggttgccccaaaagttatcatataaatggttgttcaaataacacaactc 32701273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 39147888 - 39147945
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacaca 61  Q
    |||||||| || |||||||| |||||||||||||  ||||| ||||||||||||||||    
T  39147888 tttgtaaatttatgattgtcccaaaagttgtcattaaaatggttgttcaaataacaca 39147945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 14255422 - 14255482
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacaca 61  Q
    ||||||||||| || || ||||| |||||||||||  ||||||| ||||||||||||||||    
T  14255422 ttctttgtaaatttatggttgtcccaaaagttgtcgcataaatggttgttcaaataacaca 14255482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 34945039 - 34944979
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaact 64  Q
    |||||||||||||| ||||||| |||||||||| ||| |||| | ||||| ||||||||||    
T  34945039 tttgtaaaattttggttgtcacgaaagttgtcacatatatgaatattcaattaacacaact 34944979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 44654743 - 44654807
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||||| |||||||||  |||||  ||||||| |||||||||| ||| |||||||||||||||||    
T  44654743 ttctttataaaattttagttgtcttaaaagttatcatataaattatttttcaaataacacaactc 44654807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 19633403 - 19633466
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtc-atataaatgattgttcaaataacacaactc 65  Q
    |||||||||||||||||||||||||||||| || | ||| || | ||||||||||| |||||||    
T  19633403 ctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataatacaactc 19633466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 19830304 - 19830367
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtc-atataaatgattgttcaaataacacaactc 65  Q
    |||||||||||||||||||||||||||||| || | ||| || | ||||||||||| |||||||    
T  19830304 ctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataatacaactc 19830367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 29879607 - 29879540
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||||||||||| | |||||| || ||||||||||  |||||||||||||||| | |||| |||||    
T  29879607 ttctttgtaaaattataattgtcccataagttgtcattcaaatgattgttcaaatgatacaattctta 29879540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 31296657 - 31296723
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||| || || |||||| ||||||||||| |  |||| |||||||||||||||| |||||    
T  31296657 ttctttgtaaatttatggttgtcataaaagttgtcacactaatggttgttcaaataacacatctctt 31296723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 44050134 - 44050200
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||| || || ||||| |||||||||||  | ||||| |||||||||||||||| |||||    
T  44050134 ttctttgtaaatttatggttgtctcaaaagttgtcgcacaaatggttgttcaaataacacacctctt 44050200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 8293367 - 8293416
Alignment:
Q  19 ttgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||||||||||||||||  || || ||||||||||| |||||||||||    
T  8293367 ttgtcacaaaagttgtcattcaattggttgttcaaataccacaactctta 8293416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 9207711 - 9207772
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaact 64  Q
    ||||||||||||||| ||||||||||| || ||| ||| ||   ||||||||||||||||||    
T  9207711 ctttgtaaaattttggttgtcacaaaaattatcacatatatagatgttcaaataacacaact 9207772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 30339801 - 30339752
Alignment:
Q  16 tgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||||||| || ||||| |||| |||||| ||||||||||||||||||||    
T  30339801 tgattgtctcataagttctcatttaaatggttgttcaaataacacaactc 30339752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 42340683 - 42340638
Alignment:
Q  25 caaaagttgtcatataaatgattgttcaaataacacaactcttatt 70  Q
    ||||||||||| |||||||   ||||||||||||||||||||||||    
T  42340683 caaaagttgtcctataaatagatgttcaaataacacaactcttatt 42340638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 136049 - 136108
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||||||||||||  ||||| |||||||   ||||||||||  ||||||||||||||||||||    
T  136049 tttgtaaaattttagttgtctcaaaagt---catataaatggatgttcaaataacacaactct 136108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 5054106 - 5054058
Alignment:
Q  19 ttgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||| |||||||||||||||||||  || || ||||||||||||||||    
T  5054106 ttgtctcaaaagttgtcatataaatagttttttaaataacacaactctt 5054058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19642717 - 19642777
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacaca 61  Q
    ||||||| |||||| || ||||| |||||||| |||||||||||  |||| ||||||||||    
T  19642717 ttctttgcaaaattgtggttgtctcaaaagttctcatataaatggatgtttaaataacaca 19642777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 31415029 - 31415093
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||||| ||||||| || ||||| |||||||| |||   |||||||||||||||||| |||||||    
T  31415029 ttctttttaaaattatggttgtctcaaaagttatcaataaaatgattgttcaaataatacaactc 31415093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 41042375 - 41042439
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||| |||||||||| |||||| |||| |||||| ||| |||  ||||||||||||| |||||||    
T  41042375 ctttataaaattttggttgtcataaaaattgtcacatatatggatgttcaaataacagaactctt 41042439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 38944916 - 38944979
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaact 64  Q
    |||||||||||||||||||||||  |||||||||||||||||||| |||| |||||||||||||    
T  38944916 ttctttgtaaaattttgattgtcttaaaagttgtcatataaatgaatgtttaaataacacaact 38944979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 46022219 - 46022152
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||| |||||||||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  46022219 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctta 46022152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 7701663 - 7701730
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||| ||||| |||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  7701663 ttctttataaaactttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctta 7701730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 24614266 - 24614203
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||||||||||||||||| ||||||||||| ||| ||| |||| ||||||||||||||||||||    
T  24614266 ctttgtaaaattttgattatcacaaaagttatcacatatatgaatgttcaaataacacaactct 24614203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 38956568 - 38956506
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||| |||||||||||||||||| ||| |||  |||||||||||||||||||    
T  38956568 ctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 38956506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 3614397 - 3614333
Alignment:
Q  2 tctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||||||||||||||| ||||  ||||||||||||||||||||  ||||||||||||| ||||||    
T  3614397 tctttgtaaaattttggttgtttcaaaagttgtcatataaatggatgttcaaataacataactct 3614333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 40417893 - 40417957
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||||| ||||| ||||||||||| |||||||   |||||||||||||||||||    
T  40417893 ttctttgtaaaattttggttgtctcaaaagttgtcgtataaatagatgttcaaataacacaactc 40417957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 32529806 - 32529735
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactcttatttaaa 74  Q
    ||||||||||||||||||||||||||| |||||| ||| |||  || ||||||||||||||| ||| |||||    
T  32529806 ctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgctcaaataacacaacttttaattaaa 32529735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 25192869 - 25192803
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||||  |||||||||||||||||| ||  |||| | |||||||||||||||||||    
T  25192869 ttctttgtaaaattttagttgtcacaaaagttgtcacatgtatgaatattcaaataacacaactctt 25192803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 41189493 - 41189428
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgt--catataaatgattgttcaaataacacaactct 66  Q
    |||||||||||||||||||||| ||||||| |  |||||| |||| ||||||||||||||||||||    
T  41189493 ctttgtaaaattttgattgtcataaaagttatcacatatatatgaatgttcaaataacacaactct 41189428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 32803813 - 32803870
Alignment:
Q  6 tgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaac 63  Q
    ||||||||||| |||||  ||||||||||||||||||||  |||||||||||||||||    
T  32803813 tgtaaaattttaattgtttcaaaagttgtcatataaatggatgttcaaataacacaac 32803870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 35072314 - 35072249
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||||| |||||||||| ||||  ||||||||||||||||||||  |||||| |||||||||||||    
T  35072314 ttctttataaaattttggttgtttcaaaagttgtcatataaatggatgttcagataacacaactct 35072249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 41989689 - 41989628
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||||||||||||| |||||||||||||| ||| ||| |||  |||||||||||||||||||    
T  41989689 tttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaataacacaactc 41989628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 3937073 - 3937009
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||| |||||||||| |||||||||||||||||| ||  |||  |||||||||||||||||||||    
T  3937073 ctttataaaattttggttgtcacaaaagttgtcacatgtatggatgttcaaataacacaactctt 3937009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 40112904 - 40112841
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||||||||||||||||||||| | ||||||| | ||| |||  ||||||||||||||||||||    
T  40112904 ctttgtaaaattttgattgtcagagaagttgttacatatatggatgttcaaataacacaactct 40112841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 10700138 - 10700076
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaac 63  Q
    |||||| ||||||| || ||||| ||||||||||||   ||||||||||||||||||||||||    
T  10700138 ttctttataaaattatggttgtcccaaaagttgtcaatcaaatgattgttcaaataacacaac 10700076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 31445437 - 31445502
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatat-aaatgattgttcaaataacacaactct 66  Q
    ||||||||||||||||||||||  ||||| || |||||| |||||| ||||||||||||||||||||    
T  31445437 ttctttgtaaaattttgattgttgcaaaaattatcatataaaatga-tgttcaaataacacaactct 31445502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 35098648 - 35098590
Alignment:
Q  8 taaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||||||||| ||||  ||||||||||||||||||||  | ||||||||||||||||||    
T  35098648 taaaattttggttgtttcaaaagttgtcatataaatggatattcaaataacacaactct 35098590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 43942751 - 43942817
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||||| ||| ||||||| || ||| ||| |||  |||||||||||||||||||||    
T  43942751 ttctttgtaaaattttggttgccacaaaaattatcacatatatggatgttcaaataacacaactctt 43942817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 44895522 - 44895460
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||| |||||||||||||||| | ||| |||  ||||||||||||| |||||    
T  44895522 ctttgtaaaattttggttgtcacaaaagttgttacatatatggatgttcaaataacataactc 44895460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 6522192 - 6522159
Alignment:
Q  34 tcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||||||||||||||||||||||    
T  6522192 tcatataaatgattgttcaaataacacaactctt 6522159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 41018783 - 41018848
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    ||||||||||| || ||||||||| |||||||||||  |||||  || ||||||||||||||||||    
T  41018783 ttctttgtaaatttatgattgtcataaaagttgtcacctaaatagttattcaaataacacaactct 41018848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 43159527 - 43159463
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||| || || ||||||  ||||||||||  |||||| ||||||||||||||||||||    
T  43159527 ttctttgtaaatttatggttgtcatcaaagttgtcacctaaatggttgttcaaataacacaactc 43159463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 1284548 - 1284599
Alignment:
Q  16 tgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||||||  |||||||| ||||| ||||| ||||||||||||||||||||||    
T  1284548 tgattgtatcaaaagttatcataaaaatggttgttcaaataacacaactctt 1284599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 39110991 - 39111046
Alignment:
Q  10 aaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||| |||||||| || ||||||||||  |||| |||||||||||||||||||||    
T  39110991 aaattatgattgtctcataagttgtcattaaaataattgttcaaataacacaactc 39111046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 41863578 - 41863539
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaat 43  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  41863578 tttgtaaaattttgattgtcttaaaagttgtcatataaat 41863539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 22918119 - 22918057
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||||||||| |||||||||||| ||  |||  || |||||||| |||||||    
T  22918119 ctttgtaaaattttgattgtcgcaaaagttgtcacatgtatggatgctcaaataatacaactc 22918057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 46095083 - 46095137
Alignment:
Q  12 attttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||||||||||| |||| ||||||||||||||   | ||||||||||||||||||    
T  46095083 attttgattgtctcaaaggttgtcatataaatagatattcaaataacacaactct 46095137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 2305813 - 2305752
Alignment:
Q  10 aaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactcttattt 71  Q
    ||||| |||||||| || ||||| | ||  ||||| ||||||||||||||||||||||||||    
T  2305813 aaattatgattgtcgcataagttattattgaaatggttgttcaaataacacaactcttattt 2305752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 27568143 - 27568204
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||| || ||||| || ||||||| |   ||||||||||||||||||||||||||    
T  27568143 tttgtaaaattatggttgtcccagaagttgttaataaaatgattgttcaaataacacaactc 27568204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 35600791 - 35600864
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc-ttatttaa 73  Q
    ||||||||||| |  || ||||||||||||||||||   ||||| |||||||||||||||| ||| ||||||||    
T  35600791 ttctttgtaaattagtggttgtcacaaaagttgtcactcaaatggttgttcaaataacacacctcattatttaa 35600864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42553017 - 42553078
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaa 62  Q
    |||||||||||||| || || || |||||||| |||  |||||| |||||||||||||||||    
T  42553017 ttctttgtaaaattatggttttctcaaaagttatcaattaaatggttgttcaaataacacaa 42553078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 49069364 - 49069429
Alignment:
Q  2 tctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||| ||||||| |  ||||| ||||||||||||   ||||| ||||||||||||||||||||||    
T  49069364 tctttataaaattatagttgtcccaaaagttgtcaatcaaatggttgttcaaataacacaactctt 49069429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 9428535 - 9428599
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||||| | ||||||||||| ||  ||| ||| |||||||||| | |||||||||||||||||||    
T  9428535 ttctttattaaattttgattatctaaaatgttatcatataaataaatgttcaaataacacaactc 9428599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18889979 - 18889919
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacaca 61  Q
    ||||||||||| || ||||||||  |||| |||||| | ||||||||||| ||||||||||    
T  18889979 ttctttgtaaatttatgattgtcctaaaaattgtcacacaaatgattgttgaaataacaca 18889919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 342 - 370
Target Start/End: Complemental strand, 30864496 - 30864468
Alignment:
Q  342 aaattaaagagaaatgatatttgtacaac 370  Q
    |||||||||||||||||||||||||||||    
T  30864496 aaattaaagagaaatgatatttgtacaac 30864468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 47356130 - 47356170
Alignment:
Q  28 aagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    ||||||||||| ||||| ||||| |||||||||||||||||    
T  47356130 aagttgtcatacaaatggttgttaaaataacacaactctta 47356170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 4820486 - 4820553
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    ||||||||||||||||||||||| |||||||| |||| |||||  |||||||||||||||||||||||    
T  4820486 ttctttgtaaaattttgattgtctcaaaagttatcatgtaaatagttgttcaaataacacaactctta 4820553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 16199569 - 16199636
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||| |||||||||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  16199569 ttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctta 16199636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 26595468 - 26595534
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||||| ||||  ||||||||||||||||||||  |||||||||||||||||||||    
T  26595468 ttctttgtaaaattttggttgtttcaaaagttgtcatataaatggatgttcaaataacacaactctt 26595534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 32316880 - 32316815
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||  ||||||||||||||||||||    
T  32316880 ttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactct 32316815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 33430312 - 33430248
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||| |||||||||||||||||| ||| |||| ||| |||||||||||||||||    
T  33430312 ctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgtccaaataacacaactctt 33430248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 552914 - 552976
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||| |||||||||||||||||| ||| |||  |||||||||||||||||||    
T  552914 ctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 552976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 14818053 - 14818115
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||| |||||||||| |||||||||||||||||||||| || | |||||||||||||||||||    
T  14818053 ctttctaaaattttggttgtcacaaaagttgtcatatatataaatgttcaaataacacaactc 14818115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 277110 - 277174
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||||| ||||||||||| ||||||| |||| || |||| ||||||||||||||    
T  277110 ttctttgtaaaattttggttgtcacaaaaattgtcatctaaaggaatgtttaaataacacaactc 277174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 15974729 - 15974793
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||| |||||||||||||||| | ||| |||  |||||||||||||||||||||    
T  15974729 ctttgtaaaattttggttgtcacaaaagttgttacatatatggatgttcaaataacacaactctt 15974793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 22079515 - 22079451
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||| ||||||||| ||||||||||||| ||||| ||||||  |||||||||||||||||||    
T  22079515 ttctttgcaaaattttggttgtcacaaaagtggtcatctaaatggatgttcaaataacacaactc 22079451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18737519 - 18737460
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacac 60  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||  ||||||||||||||    
T  18737519 ttctttgtaaaattttggttgtcacaaaagttgtcacatacatggatgttcaaataacac 18737460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 31077915 - 31077977
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||| |||||||||||||||||| ||  |||| | |||||||||||||||||    
T  31077915 ctttgtaaaattttggttgtcacaaaagttgtcacatgtatgaatattcaaataacacaactc 31077977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 34047506 - 34047572
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||||| |||||||||||||||||| ||  |||  ||||||||||||| |||||||    
T  34047506 ttctttgtaaaattttggttgtcacaaaagttgtcacatttatggatgttcaaataacaaaactctt 34047572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 1156847 - 1156904
Alignment:
Q  9 aaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||||||||||||||||||||||| ||| ||| |||  ||||||||||||||||||||    
T  1156847 aaaattttgattgtcacaaaagttatcaaatatatggatgttcaaataacacaactct 1156904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 24900893 - 24900959
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatat-aaatgattgttcaaataacacaactctt 67  Q
    |||||||||||||||| |||||  |||| |||||||||| |||||| |||||||||||||||||||||    
T  24900893 ttctttgtaaaattttaattgttgcaaatgttgtcatataaaatga-tgttcaaataacacaactctt 24900959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 5694101 - 5694039
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||| | ||||| |||||||||||| ||| |||| |||| ||||||||||||||    
T  5694101 ctttgtaaaatttaggttgtctcaaaagttgtcacatacatgaatgtttaaataacacaactc 5694039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3552107 - 3552046
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaa 62  Q
    ||||||||||| || ||||| ||||||||||| ||||  ||||| |||||||||||||||||    
T  3552107 ttctttgtaaatttatgattatcacaaaagttatcatccaaatggttgttcaaataacacaa 3552046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3853259 - 3853206
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaa 54  Q
    ||||||||||||| ||  ||||| ||||||||||||||||||||| ||||||||    
T  3853259 ttctttgtaaaatctttgttgtctcaaaagttgtcatataaatgaatgttcaaa 3853206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 33603232 - 33603168
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||||||   ||  |||||||||||||||||||  |||||||| ||||||||||    
T  33603232 ttctttgtaaaattttgacaatcttaaaagttgtcatataaatggatgttcaaaaaacacaactc 33603168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 11612307 - 11612370
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaact 64  Q
    |||||||||||||||||||| |||||||| || ||| ||| || | | ||||||||||||||||    
T  11612307 ttctttgtaaaattttgattatcacaaaaattatcacatatataaatattcaaataacacaact 11612370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 17181883 - 17181821
Alignment:
Q  5 ttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||| || ||||||||| ||||||||| |  |||||| ||||| ||||||||||||||||    
T  17181883 ttgtaaatttatgattgtcataaaagttgttacctaaatggttgtttaaataacacaactctt 17181821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 35213512 - 35213443
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactcttattt 71  Q
    ||||||||||| || |||||||| ||||||||||||   ||||| |||||||||||||||  |||||||||    
T  35213512 ttctttgtaaa-ttatgattgtcccaaaagttgtcaaccaaatggttgttcaaataacactcctcttattt 35213443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 91793 - 91846
Alignment:
Q  14 tttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||| ||||||||| |||||| || ||||| | |||||||||||||||||||||    
T  91793 tttggttgtcacaacagttgtaatctaaataaatgttcaaataacacaactctt 91846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30457624 - 30457689
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||| ||| |||||||| || || ||||||||||||||||||||  |||| || ||||||||||||    
T  30457624 ttctatgtgaaattttggttatctcaaaagttgtcatataaatggatgttgaattaacacaactct 30457689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 34048690 - 34048621
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactcttatt 70  Q
    ||||||||||| || ||  |||| | |||||||| ||  ||||| |||||||||||||||||||||||||    
T  34048690 ttctttgtaaatttatggatgtccccaaagttgtaattaaaatggttgttcaaataacacaactcttatt 34048621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 5570288 - 5570252
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatat 39  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  5570288 ctttgtaaaattttaattgtcataaaagttgtcatat 5570252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 9e-18; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 37133814 - 37133748
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||  |||| ||||||||||||||||    
T  37133814 ttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttaaaataacacaactctt 37133748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 29025379 - 29025444
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||  |||| |||||||||||||||    
T  29025379 ttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgtttaaataacacaactct 29025444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 4054235 - 4054174
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||||||| |||||||||||||||||||||||| ||| || | |||||||||||||||||||    
T  4054235 tttgtaaagttttgattgtcacaaaagttgtcacatatataaatgttcaaataacacaactc 4054174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 27325879 - 27325944
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||||||||||||||| |||| |||||||||| ||| |||  ||||||||||||||||||||||    
T  27325879 ctttgtaaaattttgattatcacgaaagttgtcacatatatggatgttcaaataacacaactctta 27325944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 12898879 - 12898815
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||| |||||||||||||||||| ||| |||  ||||||||||||| |||||||    
T  12898879 ctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacataactctt 12898815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 22719559 - 22719623
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||||| || ||||||||||||||| ||| |||  |||||||||||||||||||    
T  22719559 ttctttgtaaaattttggttatcacaaaagttgtcacatatatggctgttcaaataacacaactc 22719623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 24479344 - 24479407
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    ||||||||||||||  |||||||||||||| ||||||| |||| || |||||||||||||||||    
T  24479344 ctttgtaaaattttagttgtcacaaaagttatcatatatatgaatgctcaaataacacaactct 24479407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 34186728 - 34186791
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    ||||| |||||||||||||||||||||||||||| ||  |||  ||||||||||||||||||||    
T  34186728 ctttgcaaaattttgattgtcacaaaagttgtcacatgtatggatgttcaaataacacaactct 34186791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 23754658 - 23754594
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||||| ||||  |||| |||||||||||||  | |||||||||||||||||||    
T  23754658 ttctttgtaaaattttggttgttgcaaaggttgtcatataaaataatgttcaaataacacaactc 23754594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 37449375 - 37449311
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||||||||||||||||| ||||||||||| ||| ||| |||  | |||||||||||||||||||    
T  37449375 ctttgtaaaattttgattatcacaaaagttatcacatatatggatattcaaataacacaactctt 37449311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 7598836 - 7598891
Alignment:
Q  10 aaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||||||| ||||| |||||||| |||||||| ||| |||||||||||||||||||    
T  7598836 aaattttggttgtctcaaaagttttcatataattgaatgttcaaataacacaactc 7598891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 36660402 - 36660339
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaact 64  Q
    |||||| ||||||||||||||||||||||||| ||| ||  |||  ||||||||||||||||||    
T  36660402 ttctttataaaattttgattgtcacaaaagttatcacatttatggatgttcaaataacacaact 36660339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 13106599 - 13106665
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||| || || |||| | |||||||||||  |||||| ||||||||||||||||||||||    
T  13106599 ttctttgtaaatttatggttgttataaaagttgtcacctaaatggttgttcaaataacacaactctt 13106665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 7271972 - 7272033
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||| |||||||||||||||||||||||||||| ||  |||  |||||| ||||||||||||    
T  7271972 tttgcaaaattttgattgtcacaaaagttgtcacatgtatggatgttcatataacacaactc 7272033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 11253494 - 11253429
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    ||||||||||||||||| | |||||||||||||||||||  ||   ||||||||||| ||||||||    
T  11253494 ttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaataatacaactct 11253429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 36816568 - 36816507
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaa 62  Q
    ||||||| |||||||||||| ||||||||||||||| ||| ||   ||||||||||||||||    
T  36816568 ttctttgcaaaattttgattatcacaaaagttgtcacatatatagatgttcaaataacacaa 36816507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 32133445 - 32133505
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaact 64  Q
    |||||||||||||| || || ||||| || |||||||||||  ||||||||||||||||||    
T  32133445 tttgtaaaattttggttatctcaaaatttatcatataaatggatgttcaaataacacaact 32133505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 34796508 - 34796568
Alignment:
Q  8 taaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    |||||||||| |||||  |||||||||||||||| || |||||||||||| | ||||||||    
T  34796508 taaaattttggttgtcttaaaagttgtcatataattggttgttcaaataatataactctta 34796568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 36251447 - 36251503
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataaca 59  Q
    ||||||||||||||||||||||| |||||| ||| ||| |||  |||||||||||||    
T  36251447 ctttgtaaaattttgattgtcacgaaagttatcacatatatggatgttcaaataaca 36251503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 10692552 - 10692615
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||||||||||||||||||||| | |||||| || ||| |||  ||||||||||| ||||||||    
T  10692552 ctttgtaaaattttgattgtcagagaagttgacacatatatggatgttcaaataatacaactct 10692615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 10839434 - 10839367
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctta 68  Q
    ||||||||||||||||  ||||| ||||| || ||||| |||||  |||||||||||||| |||||||    
T  10839434 ttctttgtaaaattttagttgtctcaaaaattatcataaaaatggatgttcaaataacactactctta 10839367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 13244352 - 13244395
Alignment:
Q  28 aagttgtcatataaatgattgttcaaataacacaactcttattt 71  Q
    |||||||| || ||||||||||| ||||||||||||||||||||    
T  13244352 aagttgtcgtaaaaatgattgttaaaataacacaactcttattt 13244395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 21526232 - 21526165
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatat-aaatgattgttcaaataacacaactctt 67  Q
    |||||||| ||||| || ||||| |||||||||||| || ||||| ||||| ||||||||||||||||    
T  21526232 ttctttgtgaaattatggttgtcccaaaagttgtcaaatcaaatggttgtttaaataacacaactctt 21526165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27854720 - 27854661
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacac 60  Q
    |||||||||||||||| ||||||  ||||||| ||||  |||||| ||||||||||||||    
T  27854720 ttctttgtaaaattttaattgtcttaaaagttatcatgaaaatgaatgttcaaataacac 27854661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 32501146 - 32501087
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaa 62  Q
    ||||||||||||||| ||||||||||| || ||| ||| |||  ||||||||||||||||    
T  32501146 ctttgtaaaattttggttgtcacaaaaattctcacatatatggatgttcaaataacacaa 32501087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 34639655 - 34639717
Alignment:
Q  4 tttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    ||||||||||||||||| || ||||| || |||| ||||||  ||||||||||||| ||||||    
T  34639655 tttgtaaaattttgattctctcaaaaattatcatgtaaatggatgttcaaataacataactct 34639717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 42768325 - 42768387
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    ||||||||||||||  ||||||||||| || ||| ||| |||  |||||||||||||||||||    
T  42768325 ctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacacaactc 42768387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 43397900 - 43397966
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||||| |||||||||||| ||||| ||  |||  ||||||| ||||||| |||||    
T  43397900 ttctttgtaaaattttggttgtcacaaaagctgtcacatgtatggatgttcaattaacacatctctt 43397966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 2621927 - 2621960
Alignment:
Q  28 aagttgtcatataaatgattgttcaaataacaca 61  Q
    ||||||||||| ||||||||||||||||||||||    
T  2621927 aagttgtcatacaaatgattgttcaaataacaca 2621960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 36969626 - 36969561
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    |||||||||||| | || ||||| || ||||||||| | |||||  ||||||||||||||||||||    
T  36969626 ttctttgtaaaaatatggttgtcgcataagttgtcaaacaaatggatgttcaaataacacaactct 36969561  T

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Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 5277449 - 5277393
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataaca 59  Q
    |||||||||||||||||||||||| || |||||| ||  |||  |||||||||||||    
T  5277449 ctttgtaaaattttgattgtcacataaattgtcacatgtatggatgttcaaataaca 5277393  T

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Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 44380697 - 44380665
Alignment:
Q  338 ttttaaattaaagagaaatgatatttgtacaac 370  Q
    |||||||| ||||||||||||||||||||||||    
T  44380697 ttttaaataaaagagaaatgatatttgtacaac 44380665  T

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Target: scaffold0199 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 8789 - 8853
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||| |||||| ||||||||||| ||| |||  |||||||||||||||||||||    
T  8789 ctttgtaaaattttggttgtcataaaagttgtcagatatatggatgttcaaataacacaactctt 8853  T

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Target: scaffold0056 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 76569 - 76505
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    ||||||||||||||| |||||||||||||||||| ||| |||  |||| ||||||||||||||||    
T  76569 ctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttaaaataacacaactctt 76505  T

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Target: scaffold0098 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 49416 - 49483
Alignment:
Q  3 ctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactcttatt 70  Q
    ||||||||||||||| || ||||||||||||||| ||| |||  ||||||||||||| ||||| ||||    
T  49416 ctttgtaaaattttggttatcacaaaagttgtcacatatatggatgttcaaataacataactcatatt 49483  T

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Target: scaffold0148 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 20845 - 20787
Alignment:
Q  9 aaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactctt 67  Q
    |||||||||||| |||||||| || |||| ||||||  |||||||||||||||||||||    
T  20845 aaaattttgattatcacaaaaattatcatttaaatggatgttcaaataacacaactctt 20787  T

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Target: scaffold0519 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 11901 - 11966
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    ||||||||||||||||| | |||||||||||||||||||  ||   ||||||||||| ||||||||    
T  11901 ttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaataatacaactct 11966  T

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Target: scaffold0184 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 16740 - 16676
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    ||||||||||| | |||||||||  |||||||||||||||||||  ||||||||||||| ||||||    
T  16740 ttctttgtaaa-tgttgattgtcttaaaagttgtcatataaatggatgttcaaataacagaactct 16676  T

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Target: scaffold0078 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 56104 - 56168
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactct 66  Q
    ||||||||||| | |||||||||  |||||||||||||||||||  ||||||||||||| ||||||    
T  56104 ttctttgtaaa-tgttgattgtcttaaaagttgtcatataaatggatgttcaaataacagaactct 56168  T

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Target: scaffold0019 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 71540 - 71472
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactcttat 69  Q
    |||||||||||||| | ||| |  |||||||| ||| | |||| |||||||||||||||||||||||||    
T  71540 ttctttgtaaaattataattttatcaaaagttatcaaacaaataattgttcaaataacacaactcttat 71472  T

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Target: scaffold0087 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 53313 - 53249
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacacaactc 65  Q
    |||||| |||| ||||| |||||  |||| || |||||||||| | |||||||||||||||||||    
T  53313 ttctttataaatttttggttgtctaaaaacttatcatataaataaatgttcaaataacacaactc 53249  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 213802 - 213742
Alignment:
Q  1 ttctttgtaaaattttgattgtcacaaaagttgtcatataaatgattgttcaaataacaca 61  Q
    |||||| |||| || || ||||| ||||| |||||||  ||||||||||||||||||||||    
T  213802 ttctttataaatttatggttgtctcaaaaattgtcatggaaatgattgttcaaataacaca 213742  T

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