View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2672_high_4 (Length: 260)
Name: NF2672_high_4
Description: NF2672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2672_high_4 |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 30964957 - 30965198
Alignment:
| Q |
1 |
aagtatgtcaatacgaagagctattgaaaacacttcatattaatgtcattgtattttctttggtcaaacatcccgtctctctttcccttgtatttcttct |
100 |
Q |
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| T |
30964957 |
aagtatatcaatacgaagagctattgaaaacacttcatattaatgtcattgtattttctttggtcagacatcccgtctctctttcccttgtatttcttct |
30965056 |
T |
|
| Q |
101 |
ttcccaagatagagcctcttctttgtccaaaataataatacaagtatataaatatacgagaaga-ttactgtccacatggttaaaaattcatgaattgaa |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |
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| T |
30965057 |
ttcccaagatagagcctcttctttgtccaaaataataatacaagtatataaatatacgagaagatttactgtccacatggttaaaaattaatgaattgaa |
30965156 |
T |
|
| Q |
200 |
tcaagaaattggaggccttaaagtttcaacaaatattcccta |
241 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
30965157 |
tcaagaaattggaggccttaaagtttcaacaaatattcccta |
30965198 |
T |
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