View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2672_low_16 (Length: 246)

Name: NF2672_low_16
Description: NF2672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2672_low_16
NF2672_low_16
[»] chr7 (15 HSPs)
chr7 (37-204)||(16440573-16440740)
chr7 (8-193)||(16161653-16161838)
chr7 (37-204)||(16455475-16455643)
chr7 (42-166)||(17242238-17242362)
chr7 (68-101)||(5802941-5802974)
chr7 (68-104)||(23764216-23764252)
chr7 (54-104)||(7368335-7368385)
chr7 (61-111)||(15853378-15853428)
chr7 (61-111)||(16036024-16036074)
chr7 (61-111)||(16050748-16050798)
chr7 (120-149)||(23831981-23832010)
chr7 (113-149)||(10922465-10922501)
chr7 (113-149)||(16499593-16499629)
chr7 (113-149)||(16508888-16508924)
chr7 (113-149)||(16524004-16524040)
[»] scaffold0003 (1 HSPs)
scaffold0003 (37-204)||(18684-18851)
[»] chr4 (16 HSPs)
chr4 (37-204)||(17085988-17086155)
chr4 (33-195)||(34194598-34194760)
chr4 (36-193)||(21964253-21964410)
chr4 (36-193)||(21979496-21979653)
chr4 (61-111)||(6558172-6558222)
chr4 (37-149)||(15082515-15082627)
chr4 (68-111)||(1894993-1895036)
chr4 (68-111)||(1909794-1909837)
chr4 (120-162)||(1642168-1642210)
chr4 (62-111)||(12784820-12784869)
chr4 (68-109)||(15652308-15652349)
chr4 (120-149)||(26139961-26139990)
chr4 (120-149)||(33676257-33676286)
chr4 (120-149)||(34270975-34271004)
chr4 (120-149)||(35057920-35057949)
chr4 (113-149)||(19640544-19640580)
[»] chr5 (37 HSPs)
chr5 (45-204)||(22897927-22898086)
chr5 (33-195)||(26772839-26773001)
chr5 (33-195)||(27283076-27283238)
chr5 (36-193)||(33510911-33511068)
chr5 (36-193)||(33526174-33526331)
chr5 (37-192)||(30144274-30144428)
chr5 (37-192)||(30178324-30178478)
chr5 (120-166)||(28899243-28899289)
chr5 (120-166)||(28935638-28935684)
chr5 (61-111)||(34494476-34494526)
chr5 (120-165)||(23723641-23723686)
chr5 (8-46)||(18118871-18118909)
chr5 (8-46)||(18129251-18129289)
chr5 (120-162)||(30956018-30956060)
chr5 (72-149)||(11544885-11544962)
chr5 (72-149)||(11558944-11559021)
chr5 (120-153)||(30929143-30929176)
chr5 (61-107)||(22269842-22269888)
chr5 (120-149)||(9312056-9312085)
chr5 (120-149)||(9327315-9327344)
chr5 (120-149)||(12126758-12126787)
chr5 (120-149)||(12142011-12142040)
chr5 (120-149)||(13315043-13315072)
chr5 (120-149)||(13330370-13330399)
chr5 (120-149)||(22444716-22444745)
chr5 (120-149)||(24946628-24946657)
chr5 (120-149)||(26474996-26475025)
chr5 (120-149)||(26490044-26490073)
chr5 (120-149)||(31426007-31426036)
chr5 (120-149)||(31441345-31441374)
chr5 (120-149)||(37661753-37661782)
chr5 (120-149)||(37677036-37677065)
chr5 (120-149)||(37742388-37742417)
chr5 (120-149)||(37776470-37776499)
chr5 (120-149)||(41300629-41300658)
chr5 (8-36)||(40463942-40463970)
chr5 (8-36)||(40478833-40478861)
[»] scaffold0252 (1 HSPs)
scaffold0252 (33-193)||(1085-1245)
[»] scaffold0027 (1 HSPs)
scaffold0027 (36-193)||(129917-130074)
[»] chr6 (28 HSPs)
chr6 (36-193)||(7987115-7987272)
chr6 (36-193)||(30563526-30563683)
chr6 (36-193)||(27192208-27192365)
chr6 (36-193)||(27204061-27204218)
chr6 (36-193)||(27245013-27245170)
chr6 (36-193)||(27256876-27257033)
chr6 (36-184)||(30548255-30548403)
chr6 (37-192)||(27002228-27002382)
chr6 (37-192)||(27017734-27017888)
chr6 (68-113)||(20133585-20133630)
chr6 (68-113)||(22199239-22199284)
chr6 (120-162)||(22940514-22940556)
chr6 (120-162)||(23862958-23863000)
chr6 (120-153)||(30721773-30721806)
chr6 (113-149)||(18939635-18939671)
chr6 (120-162)||(22924802-22924844)
chr6 (61-111)||(25178762-25178812)
chr6 (123-165)||(28198037-28198079)
chr6 (120-149)||(4729574-4729603)
chr6 (120-149)||(16997533-16997562)
chr6 (120-149)||(27212644-27212673)
chr6 (120-149)||(27236555-27236584)
chr6 (120-149)||(27307883-27307912)
chr6 (120-149)||(32782083-32782112)
chr6 (113-149)||(12616560-12616596)
chr6 (113-149)||(16346175-16346211)
chr6 (8-36)||(27039071-27039099)
chr6 (8-36)||(27067410-27067438)
[»] chr3 (25 HSPs)
chr3 (36-193)||(17975003-17975160)
chr3 (36-193)||(17990551-17990708)
chr3 (36-193)||(18219687-18219844)
chr3 (36-193)||(18234995-18235152)
chr3 (37-192)||(28333780-28333934)
chr3 (37-192)||(28348882-28349036)
chr3 (116-165)||(28166920-28166969)
chr3 (61-111)||(14142558-14142608)
chr3 (61-111)||(18525048-18525098)
chr3 (120-153)||(4653281-4653314)
chr3 (62-111)||(23012594-23012643)
chr3 (61-109)||(19448511-19448559)
chr3 (70-104)||(15365064-15365098)
chr3 (120-149)||(1733997-1734026)
chr3 (120-149)||(15883279-15883308)
chr3 (120-149)||(15898458-15898487)
chr3 (120-149)||(17904036-17904065)
chr3 (120-149)||(17966888-17966917)
chr3 (120-149)||(17997368-17997397)
chr3 (120-149)||(19703896-19703925)
chr3 (120-149)||(26685069-26685098)
chr3 (120-149)||(47196840-47196869)
chr3 (42-82)||(17786865-17786905)
chr3 (42-82)||(19088386-19088426)
chr3 (42-82)||(19364876-19364916)
[»] chr2 (17 HSPs)
chr2 (36-193)||(16819643-16819800)
chr2 (36-193)||(16834884-16835041)
chr2 (36-193)||(16874865-16875022)
chr2 (36-193)||(32059535-32059692)
chr2 (36-193)||(32044339-32044496)
chr2 (42-192)||(35763431-35763580)
chr2 (120-166)||(10116403-10116449)
chr2 (61-111)||(21693878-21693928)
chr2 (61-111)||(21708659-21708709)
chr2 (68-101)||(39884674-39884707)
chr2 (68-101)||(39900250-39900283)
chr2 (120-149)||(2731148-2731177)
chr2 (120-149)||(13819449-13819478)
chr2 (54-111)||(29439332-29439389)
chr2 (120-149)||(40195038-40195067)
chr2 (113-149)||(28876706-28876742)
chr2 (113-149)||(28891916-28891952)
[»] chr8 (11 HSPs)
chr8 (36-193)||(4486592-4486749)
chr8 (120-162)||(17896831-17896873)
chr8 (120-149)||(554628-554657)
chr8 (120-149)||(6053467-6053496)
chr8 (120-149)||(14026245-14026274)
chr8 (120-149)||(19669173-19669202)
chr8 (68-101)||(19697664-19697697)
chr8 (120-149)||(21338264-21338293)
chr8 (120-149)||(21378225-21378254)
chr8 (120-149)||(24462254-24462283)
chr8 (120-149)||(44570810-44570839)
[»] scaffold1536 (1 HSPs)
scaffold1536 (36-193)||(1039-1196)
[»] chr1 (14 HSPs)
chr1 (33-135)||(47767122-47767224)
chr1 (120-166)||(16653689-16653735)
chr1 (61-107)||(16404800-16404846)
chr1 (61-111)||(20344332-20344382)
chr1 (120-150)||(36088884-36088914)
chr1 (120-149)||(10938069-10938098)
chr1 (120-149)||(10957260-10957289)
chr1 (120-149)||(10972483-10972512)
chr1 (120-149)||(28579543-28579572)
chr1 (120-149)||(28594969-28594998)
chr1 (120-149)||(47353413-47353442)
chr1 (113-149)||(18292631-18292667)
chr1 (89-149)||(20455765-20455825)
chr1 (113-149)||(21480608-21480644)
[»] scaffold0021 (2 HSPs)
scaffold0021 (37-111)||(179180-179254)
scaffold0021 (61-111)||(98267-98317)
[»] scaffold0750 (1 HSPs)
scaffold0750 (61-111)||(152-202)
[»] scaffold0347 (1 HSPs)
scaffold0347 (61-111)||(17245-17295)
[»] scaffold0225 (1 HSPs)
scaffold0225 (120-153)||(273-306)
[»] scaffold0393 (1 HSPs)
scaffold0393 (37-149)||(6100-6212)
[»] scaffold0184 (1 HSPs)
scaffold0184 (63-111)||(21881-21929)
[»] scaffold0078 (1 HSPs)
scaffold0078 (63-111)||(50915-50963)
[»] scaffold1665 (1 HSPs)
scaffold1665 (58-101)||(838-881)
[»] scaffold0740 (1 HSPs)
scaffold0740 (61-107)||(945-991)
[»] scaffold0260 (1 HSPs)
scaffold0260 (61-111)||(6655-6705)
[»] scaffold0235 (1 HSPs)
scaffold0235 (54-104)||(209-259)
[»] scaffold0134 (1 HSPs)
scaffold0134 (120-162)||(22401-22443)
[»] scaffold0049 (1 HSPs)
scaffold0049 (120-162)||(37051-37093)
[»] scaffold1648 (1 HSPs)
scaffold1648 (120-149)||(835-864)
[»] scaffold0061 (1 HSPs)
scaffold0061 (120-149)||(32876-32905)
[»] scaffold0017 (1 HSPs)
scaffold0017 (120-149)||(165886-165915)


Alignment Details
Target: chr7 (Bit Score: 156; Significance: 5e-83; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 37 - 204
Target Start/End: Original strand, 16440573 - 16440740
Alignment:
Q  37 ggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtctt 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16440573 ggatacggatctcacagggacgctcagggatcgttggattgatccaagctcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtctt 16440672  T
Q  137 gaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttgcaccaaatctt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  16440673 gaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcacttccaccaaatctt 16440740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 8 - 193
Target Start/End: Complemental strand, 16161838 - 16161653
Alignment:
Q  8 taggcccaaacccaaagcccacactcaaaggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaagg 107  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  16161838 taggcccaaacccaaagcccacactcaatggatacggatctcacagggacgctcagggatcgttggattgatccaagaccccaaaccctagatctaaggg 16161739  T
Q  108 ctcacaacgcaggggattggaccggtcttgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttg 193  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||| ||||||||    
T  16161738 ctcacaacgcagggaattggaccggtcttgaaccggtccggtctaacgctctatataaaaccctagcgcgccggttttttcatttg 16161653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 37 - 204
Target Start/End: Original strand, 16455475 - 16455643
Alignment:
Q  37 ggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgca-ggggattggaccggtct 135  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16455475 ggatacggatctcacagagacgctcagggttcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaaggggattggaccggtct 16455574  T
Q  136 tgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttgcaccaaatctt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  16455575 tgaaccggtccggtctagcgctctatataaaagcctaatgcgccgatttattcacttgcaccaaatctt 16455643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 17242362 - 17242238
Alignment:
Q  42 cggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtcttgaacc 141  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||    
T  17242362 cggatctcacaggaactctcagggatcgttggattgatccaagatcccaaaccctagatctaagggctcacaacacatgggattggaccggtcttgaacc 17242263  T
Q  142 ggtccggtctagcgctctatataaa 166  Q
    |||||||| |||| |||||||||||    
T  17242262 ggtccggtttagcactctatataaa 17242238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 101
Target Start/End: Original strand, 5802941 - 5802974
Alignment:
Q  68 cgttggattgatccaagatcccaaaccctagatc 101  Q
    ||||||||||||||||||||||||||||||||||    
T  5802941 cgttggattgatccaagatcccaaaccctagatc 5802974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 23764252 - 23764216
Alignment:
Q  68 cgttggattgatccaagatcccaaaccctagatctaa 104  Q
    ||||||||||||||||||| |||||||||||||||||    
T  23764252 cgttggattgatccaagatgccaaaccctagatctaa 23764216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 7368385 - 7368335
Alignment:
Q  54 ggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaa 104  Q
    |||||| |||| | |||| |||||||||||||| |||||||||||||||||    
T  7368385 ggacgcacaggaaccgttagattgatccaagatgccaaaccctagatctaa 7368335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 15853428 - 15853378
Alignment:
Q  61 cagggatcgttggattgatccaagatcccaaaccctagatctaaaggctca 111  Q
    |||||| ||||||||||||| | ||  ||||||||||||||||||||||||    
T  15853428 cagggagcgttggattgatctaggaaaccaaaccctagatctaaaggctca 15853378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 16036074 - 16036024
Alignment:
Q  61 cagggatcgttggattgatccaagatcccaaaccctagatctaaaggctca 111  Q
    |||||| | ||||||||||||| ||  ||||||||||||||||||||||||    
T  16036074 cagggagcattggattgatccaggaagccaaaccctagatctaaaggctca 16036024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 16050798 - 16050748
Alignment:
Q  61 cagggatcgttggattgatccaagatcccaaaccctagatctaaaggctca 111  Q
    |||||| | ||||||||||||| ||  ||||||||||||||||||||||||    
T  16050798 cagggagcattggattgatccaggaagccaaaccctagatctaaaggctca 16050748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 23831981 - 23832010
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  23831981 gggattggaccggtcttgaaccggtccggt 23832010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 10922465 - 10922501
Alignment:
Q  113 aacgcaggggattggaccggtcttgaaccggtccggt 149  Q
    |||| |||||||||||||||||||| |||||||||||    
T  10922465 aacgaaggggattggaccggtcttggaccggtccggt 10922501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 16499593 - 16499629
Alignment:
Q  113 aacgcaggggattggaccggtcttgaaccggtccggt 149  Q
    |||| |||||||||||||||||||| |||||||||||    
T  16499593 aacgaaggggattggaccggtcttggaccggtccggt 16499629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 16508888 - 16508924
Alignment:
Q  113 aacgcaggggattggaccggtcttgaaccggtccggt 149  Q
    |||| |||||||||||||||||||| |||||||||||    
T  16508888 aacgaaggggattggaccggtcttggaccggtccggt 16508924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 16524004 - 16524040
Alignment:
Q  113 aacgcaggggattggaccggtcttgaaccggtccggt 149  Q
    |||| |||||||||||||||||||| |||||||||||    
T  16524004 aacgaaggggattggaccggtcttggaccggtccggt 16524040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 37 - 204
Target Start/End: Original strand, 18684 - 18851
Alignment:
Q  37 ggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtctt 136  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18684 ggatacggatctcacagagacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattagaccggtctt 18783  T
Q  137 gaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttgcaccaaatctt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  18784 gaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcacttacaccaaatctt 18851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 152; Significance: 1e-80; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 37 - 204
Target Start/End: Complemental strand, 17086155 - 17085988
Alignment:
Q  37 ggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtctt 136  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17086155 ggatacggatctcacagagacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattagaccggtctt 17086056  T
Q  137 gaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttgcaccaaatctt 204  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  17086055 gaaccggtccggtctagcgctctatataaaggcctaatgcgccggtttattcacttgcaccaaatctt 17085988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 33 - 195
Target Start/End: Original strand, 34194598 - 34194760
Alignment:
Q  33 caaaggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccgg 132  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  34194598 caaaggatccggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaagggctcacaacgcagggggttggaccgg 34194697  T
Q  133 tcttgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttgca 195  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  34194698 tcttgaaccggtccggtctagcgccctatataaaagcctaatgcgccggttttttcatttgca 34194760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 36 - 193
Target Start/End: Complemental strand, 21964410 - 21964253
Alignment:
Q  36 aggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtct 135  Q
    |||| ||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21964410 aggaaacggatctcacagggatactcagggaccgttggattgatccaaggtcccaaaccctagatctaagggctcacaacgcaggggattggaccggtct 21964311  T
Q  136 tgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttg 193  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||    
T  21964310 tgaaccggtccggtctagcgccctatataaaaccctaacgcgccggttttttcatttg 21964253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 36 - 193
Target Start/End: Complemental strand, 21979653 - 21979496
Alignment:
Q  36 aggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtct 135  Q
    |||| ||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21979653 aggaaacggatctcacagggatactcagggaccgttggattgatccaaggtcccaaaccctagatctaagggctcacaacgcaggggattggaccggtct 21979554  T
Q  136 tgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttg 193  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||    
T  21979553 tgaaccggtccggtctagcgccctatataaaaccctaacgcgccggttttttcatttg 21979496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 6558172 - 6558222
Alignment:
Q  61 cagggatcgttggattgatccaagatcccaaaccctagatctaaaggctca 111  Q
    |||||| ||||||||||||||| ||  ||||||||||||||||||||||||    
T  6558172 cagggagcgttggattgatccaggaagccaaaccctagatctaaaggctca 6558222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 149
Target Start/End: Original strand, 15082515 - 15082627
Alignment:
Q  37 ggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtctt 136  Q
    |||| |||||| ||| || | |||||||||||||||||| |||||| ||  | ||| ||||||||||||||| || | |  |||| |||||||| |  ||    
T  15082515 ggatccggatcacacgggaaagctcagggatcgttggatcgatccaggaagcaaaaacctagatctaaaggcgcagatcaaagggaattggaccagaatt 15082614  T
Q  137 gaaccggtccggt 149  Q
    |||||||||||||    
T  15082615 gaaccggtccggt 15082627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 1895036 - 1894993
Alignment:
Q  68 cgttggattgatccaagatcccaaaccctagatctaaaggctca 111  Q
    ||||||||||||||| ||  ||||||||||||||||||||||||    
T  1895036 cgttggattgatccaggaagccaaaccctagatctaaaggctca 1894993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 1909837 - 1909794
Alignment:
Q  68 cgttggattgatccaagatcccaaaccctagatctaaaggctca 111  Q
    ||||||||||||||| ||  ||||||||||||||||||||||||    
T  1909837 cgttggattgatccaggaagccaaaccctagatctaaaggctca 1909794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 162
Target Start/End: Complemental strand, 1642210 - 1642168
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggtctagcgctctata 162  Q
    ||||||||||||||||||||||| |||||||||| | ||||||    
T  1642210 gggattggaccggtcttgaaccgatccggtctaggggtctata 1642168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 12784869 - 12784820
Alignment:
Q  62 agggatcgttggattgatccaagatcccaaaccctagatctaaaggctca 111  Q
    ||||| ||||||||||||||| ||  || |||||||||||||||||||||    
T  12784869 agggagcgttggattgatccaggaagcctaaccctagatctaaaggctca 12784820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 15652308 - 15652349
Alignment:
Q  68 cgttggattgatccaagatcccaaaccctagatctaaaggct 109  Q
    ||||||||||||||| ||  ||||||||||||||||||||||    
T  15652308 cgttggattgatccaggaagccaaaccctagatctaaaggct 15652349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 26139961 - 26139990
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  26139961 gggattggaccggtcttgaaccggtccggt 26139990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 33676286 - 33676257
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  33676286 gggattggaccggtcttgaaccggtccggt 33676257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 34271004 - 34270975
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  34271004 gggattggaccggtcttgaaccggtccggt 34270975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 35057920 - 35057949
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  35057920 gggattggaccggtcttgaaccggtccggt 35057949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 19640544 - 19640580
Alignment:
Q  113 aacgcaggggattggaccggtcttgaaccggtccggt 149  Q
    |||| |||||||||||||||||||| |||||||||||    
T  19640544 aacgaaggggattggaccggtcttggaccggtccggt 19640580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 148; Significance: 3e-78; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 45 - 204
Target Start/End: Complemental strand, 22898086 - 22897927
Alignment:
Q  45 atctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtcttgaaccggt 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  22898086 atctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtcttgaactggt 22897987  T
Q  145 ccggtctagcgctctatataaaagcctaatgcgccggtttattcatttgcaccaaatctt 204  Q
    ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22897986 ccgttctagcgctctatataaaagcctaatgcgccggtttattcacttgcaccaaatctt 22897927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 33 - 195
Target Start/End: Complemental strand, 26773001 - 26772839
Alignment:
Q  33 caaaggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccgg 132  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  26773001 caaaggatccggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaagggctcacaacgcagggggttggaccgg 26772902  T
Q  133 tcttgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttgca 195  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  26772901 tcttgaaccggtccggtctagcgccctatataaaagcctaatgcgccggttttttcatttgca 26772839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 33 - 195
Target Start/End: Complemental strand, 27283238 - 27283076
Alignment:
Q  33 caaaggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccgg 132  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  27283238 caaaggatccggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaagggctcacaacgcagggggttggaccgg 27283139  T
Q  133 tcttgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttgca 195  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  27283138 tcttgaaccggtccggtctagcgccctatataaaagcctaatgcgccggttttttcatttgca 27283076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 36 - 193
Target Start/End: Complemental strand, 33511068 - 33510911
Alignment:
Q  36 aggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtct 135  Q
    |||| ||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33511068 aggaaacggatctcacagggatactcagggaccgttggattgatccaaggtcccaaaccctagatctaagggctcacaacgcaggggattggaccggtct 33510969  T
Q  136 tgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttg 193  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||    
T  33510968 tgaaccggtccggtctagcgccctatataaaaccctaacgcgccggttttttcatttg 33510911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 36 - 193
Target Start/End: Complemental strand, 33526331 - 33526174
Alignment:
Q  36 aggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtct 135  Q
    |||| ||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33526331 aggaaacggatctcacagggatactcagggaccgttggattgatccaaggtcccaaaccctagatctaagggctcacaacgcaggggattggaccggtct 33526232  T
Q  136 tgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttg 193  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||    
T  33526231 tgaaccggtccggtctagcgccctatataaaaccctaacgcgccggttttttcatttg 33526174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 37 - 192
Target Start/End: Complemental strand, 30144428 - 30144274
Alignment:
Q  37 ggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtctt 136  Q
    |||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  30144428 ggatccggatctcacaggaatgctcagggatcgttggattgatccaagatcccaaaccctagatctaagggctcacaacgcatgggattggaccggtctt 30144329  T
Q  137 gaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcattt 192  Q
    |||||||||||||||||| |||||||| ||| ||||  |||||||||| |||||||    
T  30144328 gaaccggtccggtctagcactctatat-aaaccctagcgcgccggttttttcattt 30144274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 37 - 192
Target Start/End: Complemental strand, 30178478 - 30178324
Alignment:
Q  37 ggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtctt 136  Q
    |||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  30178478 ggatccggatctcacaggaatgctcagggatcgttggattgatccaagatcccaaaccctagatctaagggctcacaacgcatgggattggaccggtctt 30178379  T
Q  137 gaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcattt 192  Q
    |||||||||||||||||| |||||||| ||| ||||  |||||||||| |||||||    
T  30178378 gaaccggtccggtctagcactctatat-aaaccctagcgcgccggttttttcattt 30178324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 28899243 - 28899289
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggtctagcgctctatataaa 166  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||    
T  28899243 gggattggaccggtcttgaaccggtccggtctagtggtctatataaa 28899289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 28935638 - 28935684
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggtctagcgctctatataaa 166  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||    
T  28935638 gggattggaccggtcttgaaccggtccggtctagtggtctatataaa 28935684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 34494476 - 34494526
Alignment:
Q  61 cagggatcgttggattgatccaagatcccaaaccctagatctaaaggctca 111  Q
    |||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  34494476 cagggagcgttggattgatccaagaaaccaaaccctagatctaaaggctca 34494526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 165
Target Start/End: Original strand, 23723641 - 23723686
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggtctagcgctctatataa 165  Q
    |||||||||||||||||||||||||||||||||| | |||||||||    
T  23723641 gggattggaccggtcttgaaccggtccggtctaggggtctatataa 23723686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 18118871 - 18118909
Alignment:
Q  8 taggcccaaacccaaagcccacactcaaaggatacggat 46  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  18118871 taggcccaaacccaaagcccacactcaaaagatacggat 18118909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 18129251 - 18129289
Alignment:
Q  8 taggcccaaacccaaagcccacactcaaaggatacggat 46  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  18129251 taggcccaaacccaaagcccacactcaaaagatacggat 18129289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 162
Target Start/End: Complemental strand, 30956060 - 30956018
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggtctagcgctctata 162  Q
    |||||||||||||||||||||||||||||||||| | ||||||    
T  30956060 gggattggaccggtcttgaaccggtccggtctaggggtctata 30956018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 11544962 - 11544885
Alignment:
Q  72 ggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||| ||   ||||||||||||| || |||    |||| ||||||||||||||||||||||||||||||||    
T  11544962 ggattgatccaggagatcaaaccctagatccaacggccaggaacgaaggggattggaccggtcttgaaccggtccggt 11544885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 11559021 - 11558944
Alignment:
Q  72 ggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||| ||   ||||||||||||| || |||    |||| ||||||||||||||||||||||||||||||||    
T  11559021 ggattgatccaggagatcaaaccctagatccaacggccaggaacgaaggggattggaccggtcttgaaccggtccggt 11558944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 30929176 - 30929143
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggtctag 153  Q
    ||||||||||||||||||||||||||||||||||    
T  30929176 gggattggaccggtcttgaaccggtccggtctag 30929143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 22269842 - 22269888
Alignment:
Q  61 cagggatcgttggattgatccaagatcccaaaccctagatctaaagg 107  Q
    |||||| ||||||||||||||| ||  ||||||||||||||||||||    
T  22269842 cagggagcgttggattgatccaggaagccaaaccctagatctaaagg 22269888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 9312085 - 9312056
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  9312085 gggattggaccggtcttgaaccggtccggt 9312056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 9327344 - 9327315
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  9327344 gggattggaccggtcttgaaccggtccggt 9327315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 12126787 - 12126758
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  12126787 gggattggaccggtcttgaaccggtccggt 12126758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 12142040 - 12142011
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  12142040 gggattggaccggtcttgaaccggtccggt 12142011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 13315043 - 13315072
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  13315043 gggattggaccggtcttgaaccggtccggt 13315072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 13330370 - 13330399
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  13330370 gggattggaccggtcttgaaccggtccggt 13330399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 22444745 - 22444716
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  22444745 gggattggaccggtcttgaaccggtccggt 22444716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 24946657 - 24946628
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  24946657 gggattggaccggtcttgaaccggtccggt 24946628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 26475025 - 26474996
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  26475025 gggattggaccggtcttgaaccggtccggt 26474996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 26490073 - 26490044
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  26490073 gggattggaccggtcttgaaccggtccggt 26490044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 31426036 - 31426007
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  31426036 gggattggaccggtcttgaaccggtccggt 31426007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 31441374 - 31441345
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  31441374 gggattggaccggtcttgaaccggtccggt 31441345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 37661753 - 37661782
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  37661753 gggattggaccggtcttgaaccggtccggt 37661782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 37677036 - 37677065
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  37677036 gggattggaccggtcttgaaccggtccggt 37677065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 37742388 - 37742417
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  37742388 gggattggaccggtcttgaaccggtccggt 37742417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 37776470 - 37776499
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  37776470 gggattggaccggtcttgaaccggtccggt 37776499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 41300658 - 41300629
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  41300658 gggattggaccggtcttgaaccggtccggt 41300629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 36
Target Start/End: Original strand, 40463942 - 40463970
Alignment:
Q  8 taggcccaaacccaaagcccacactcaaa 36  Q
    |||||||||||||||||||||||||||||    
T  40463942 taggcccaaacccaaagcccacactcaaa 40463970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 36
Target Start/End: Original strand, 40478833 - 40478861
Alignment:
Q  8 taggcccaaacccaaagcccacactcaaa 36  Q
    |||||||||||||||||||||||||||||    
T  40478833 taggcccaaacccaaagcccacactcaaa 40478861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0252 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 33 - 193
Target Start/End: Original strand, 1085 - 1245
Alignment:
Q  33 caaaggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccgg 132  Q
    ||||||| ||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  1085 caaaggaaacggatctcacagggatactcagggaccgttggattgatccaaggtcccaaaccctagatctaagggctcacaacgcaggggattggaccgg 1184  T
Q  133 tcttgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttg 193  Q
    |||||||||||||||||||||||| |||||||||| |||| |||||||||||| |||||||    
T  1185 tcttgaaccggtccggtctagcgccctatataaaaccctagtgcgccggtttactcatttg 1245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 36 - 193
Target Start/End: Original strand, 129917 - 130074
Alignment:
Q  36 aggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtct 135  Q
    |||| ||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  129917 aggaaacggatctcacagggatactcagggaccgttggattgatccaaggtcccaaaccctagatctaagggctcacaacgcaggggattggaccggtct 130016  T
Q  136 tgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttg 193  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||    
T  130017 tgaaccggtccggtctagcgccctatataaaaccctaacgcgccggttttttcatttg 130074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 118; Significance: 3e-60; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 36 - 193
Target Start/End: Complemental strand, 7987272 - 7987115
Alignment:
Q  36 aggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtct 135  Q
    |||| ||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7987272 aggaaacggatctcacagggatactcagggaccgttggattgatccaaggtcccaaaccctagatctaagggctcacaacgcaggggattggaccggtct 7987173  T
Q  136 tgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttg 193  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||    
T  7987172 tgaaccggtccggtctagcgccctatataaaaccctaacgcgccggttttttcatttg 7987115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 36 - 193
Target Start/End: Original strand, 30563526 - 30563683
Alignment:
Q  36 aggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtct 135  Q
    |||| ||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30563526 aggaaacggatctcacagggatactcagggaccgttggattgatccaaggtcccaaaccctagatctaagggctcacaacgcaggggattggaccggtct 30563625  T
Q  136 tgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttg 193  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||    
T  30563626 tgaaccggtccggtctagcgccctatataaaaccctaacgcgccggttttttcatttg 30563683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 36 - 193
Target Start/End: Complemental strand, 27192365 - 27192208
Alignment:
Q  36 aggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtct 135  Q
    |||| ||||||||||||||||  |||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  27192365 aggaaacggatctcacagggatactcagggaccgttggattgatccaaggtcctaaaccctagatctaagggctcacaacgcaggggattggaccggtct 27192266  T
Q  136 tgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttg 193  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||    
T  27192265 tgaaccggtccggtctagcgccctatataaaaccctaacgcgccggttttttcatttg 27192208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 36 - 193
Target Start/End: Complemental strand, 27204218 - 27204061
Alignment:
Q  36 aggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtct 135  Q
    |||| ||||||||||||||||  |||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  27204218 aggaaacggatctcacagggatactcagggaccgttggattgatccaaggtcctaaaccctagatctaagggctcacaacgcaggggattggaccggtct 27204119  T
Q  136 tgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttg 193  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||    
T  27204118 tgaaccggtccggtctagcgccctatataaaaccctaacgcgccggttttttcatttg 27204061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 36 - 193
Target Start/End: Original strand, 27245013 - 27245170
Alignment:
Q  36 aggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtct 135  Q
    |||| ||||||||||||||||  |||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  27245013 aggaaacggatctcacagggatactcagggaccgttggattgatccaaggtcctaaaccctagatctaagggctcacaacgcaggggattggaccggtct 27245112  T
Q  136 tgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttg 193  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||    
T  27245113 tgaaccggtccggtctagcgccctatataaaaccctaacgcgccggttttttcatttg 27245170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 36 - 193
Target Start/End: Original strand, 27256876 - 27257033
Alignment:
Q  36 aggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtct 135  Q
    |||| ||||||||||||||||  |||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  27256876 aggaaacggatctcacagggatactcagggaccgttggattgatccaaggtcctaaaccctagatctaagggctcacaacgcaggggattggaccggtct 27256975  T
Q  136 tgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttg 193  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||    
T  27256976 tgaaccggtccggtctagcgccctatataaaaccctaacgcgccggttttttcatttg 27257033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 36 - 184
Target Start/End: Original strand, 30548255 - 30548403
Alignment:
Q  36 aggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtct 135  Q
    |||| ||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30548255 aggaaacggatctcacagggatactcagggaccgttggattgatccaaggtcccaaaccctagatctaagggctcacaacgcaggggattggaccggtct 30548354  T
Q  136 tgaaccggtccggtctagcgctctatataaaagcctaatgcgccggttt 184  Q
    ||||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  30548355 tgaaccggtccggtctagcgccctatataaaaccctaacgcgccggttt 30548403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 37 - 192
Target Start/End: Complemental strand, 27002382 - 27002228
Alignment:
Q  37 ggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtctt 136  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  27002382 ggatccggatctcacaggaacgctcagggatcgttggattgatccaagatcccaaaccctagatctaagggctcacaacgcatgggattggaccggtctt 27002283  T
Q  137 gaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcattt 192  Q
    |||||||||||||||||| |||||||| ||| ||||  |||||||||| |||||||    
T  27002282 gaaccggtccggtctagcactctatat-aaaccctagcgcgccggttttttcattt 27002228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 37 - 192
Target Start/End: Complemental strand, 27017888 - 27017734
Alignment:
Q  37 ggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtctt 136  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  27017888 ggatccggatctcacaggaacgctcagggatcgttggattgatccaagatcccaaaccctagatctaagggctcacaacgcatgggattggaccggtctt 27017789  T
Q  137 gaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcattt 192  Q
    |||||||||||||||||| |||||||| ||| ||||  |||||||||| |||||||    
T  27017788 gaaccggtccggtctagcactctatat-aaaccctagcgcgccggttttttcattt 27017734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 20133630 - 20133585
Alignment:
Q  68 cgttggattgatccaagatcccaaaccctagatctaaaggctcaca 113  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||    
T  20133630 cgttggattgatccaagatcaaaaaccctagatctaaaggctcaca 20133585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 22199239 - 22199284
Alignment:
Q  68 cgttggattgatccaagatcccaaaccctagatctaaaggctcaca 113  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||    
T  22199239 cgttggattgatccaagatcaaaaaccctagatctaaaggctcaca 22199284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 162
Target Start/End: Original strand, 22940514 - 22940556
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggtctagcgctctata 162  Q
    |||||||||||||||||||||||||||||||||| | ||||||    
T  22940514 gggattggaccggtcttgaaccggtccggtctagtggtctata 22940556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 162
Target Start/End: Original strand, 23862958 - 23863000
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggtctagcgctctata 162  Q
    |||||||||||||||||||||||||||||||||| | ||||||    
T  23862958 gggattggaccggtcttgaaccggtccggtctagtggtctata 23863000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 30721773 - 30721806
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggtctag 153  Q
    ||||||||||||||||||||||||||||||||||    
T  30721773 gggattggaccggtcttgaaccggtccggtctag 30721806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 18939671 - 18939635
Alignment:
Q  113 aacgcaggggattggaccggtcttgaaccggtccggt 149  Q
    |||| ||||||||||||||||||||||||||||||||    
T  18939671 aacgaaggggattggaccggtcttgaaccggtccggt 18939635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 162
Target Start/End: Original strand, 22924802 - 22924844
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggtctagcgctctata 162  Q
    |||||||| ||||||||||||||||||||||||| | ||||||    
T  22924802 gggattgggccggtcttgaaccggtccggtctaggggtctata 22924844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 25178812 - 25178762
Alignment:
Q  61 cagggatcgttggattgatccaagatcccaaaccctagatctaaaggctca 111  Q
    |||||| |||| |||||||||| ||  ||||||||||||||||||||||||    
T  25178812 cagggagcgtttgattgatccaggaagccaaaccctagatctaaaggctca 25178762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 165
Target Start/End: Original strand, 28198037 - 28198079
Alignment:
Q  123 attggaccggtcttgaaccggtccggtctagcgctctatataa 165  Q
    ||||||||||| ||||||||||||||||||| | |||||||||    
T  28198037 attggaccggtattgaaccggtccggtctaggggtctatataa 28198079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 4729574 - 4729603
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  4729574 gggattggaccggtcttgaaccggtccggt 4729603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 16997562 - 16997533
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  16997562 gggattggaccggtcttgaaccggtccggt 16997533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 27212673 - 27212644
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  27212673 gggattggaccggtcttgaaccggtccggt 27212644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 27236555 - 27236584
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  27236555 gggattggaccggtcttgaaccggtccggt 27236584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 27307883 - 27307912
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  27307883 gggattggaccggtcttgaaccggtccggt 27307912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 32782083 - 32782112
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  32782083 gggattggaccggtcttgaaccggtccggt 32782112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 12616596 - 12616560
Alignment:
Q  113 aacgcaggggattggaccggtcttgaaccggtccggt 149  Q
    |||| |||||||||||||||||||| |||||||||||    
T  12616596 aacgaaggggattggaccggtcttggaccggtccggt 12616560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 16346175 - 16346211
Alignment:
Q  113 aacgcaggggattggaccggtcttgaaccggtccggt 149  Q
    |||| |||||||||||||||||||| |||||||||||    
T  16346175 aacgaaggggattggaccggtcttggaccggtccggt 16346211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 36
Target Start/End: Complemental strand, 27039099 - 27039071
Alignment:
Q  8 taggcccaaacccaaagcccacactcaaa 36  Q
    |||||||||||||||||||||||||||||    
T  27039099 taggcccaaacccaaagcccacactcaaa 27039071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 36
Target Start/End: Complemental strand, 27067438 - 27067410
Alignment:
Q  8 taggcccaaacccaaagcccacactcaaa 36  Q
    |||||||||||||||||||||||||||||    
T  27067438 taggcccaaacccaaagcccacactcaaa 27067410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 3e-60; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 36 - 193
Target Start/End: Original strand, 17975003 - 17975160
Alignment:
Q  36 aggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtct 135  Q
    |||| ||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17975003 aggaaacggatctcacagggatactcagggaccgttggattgatccaaggtcccaaaccctagatctaagggctcacaacgcaggggattggaccggtct 17975102  T
Q  136 tgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttg 193  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||    
T  17975103 tgaaccggtccggtctagcgccctatataaaaccctaacgcgccggttttttcatttg 17975160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 36 - 193
Target Start/End: Original strand, 17990551 - 17990708
Alignment:
Q  36 aggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtct 135  Q
    |||| ||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17990551 aggaaacggatctcacagggatactcagggaccgttggattgatccaaggtcccaaaccctagatctaagggctcacaacgcaggggattggaccggtct 17990650  T
Q  136 tgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttg 193  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||    
T  17990651 tgaaccggtccggtctagcgccctatataaaaccctaacgcgccggttttttcatttg 17990708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 36 - 193
Target Start/End: Complemental strand, 18219844 - 18219687
Alignment:
Q  36 aggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtct 135  Q
    |||| ||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18219844 aggaaacggatctcacagggatactcagggaccgttggattgatccaaggtcccaaaccctagatctaagggctcacaacgcaggggattggaccggtct 18219745  T
Q  136 tgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttg 193  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||    
T  18219744 tgaaccggtccggtctagcgccctatataaaaccctaacgcgccggttttttcatttg 18219687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 36 - 193
Target Start/End: Complemental strand, 18235152 - 18234995
Alignment:
Q  36 aggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtct 135  Q
    |||| ||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18235152 aggaaacggatctcacagggatactcagggaccgttggattgatccaaggtcccaaaccctagatctaagggctcacaacgcaggggattggaccggtct 18235053  T
Q  136 tgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttg 193  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||    
T  18235052 tgaaccggtccggtctagcgccctatataaaaccctaacgcgccggttttttcatttg 18234995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 37 - 192
Target Start/End: Complemental strand, 28333934 - 28333780
Alignment:
Q  37 ggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtctt 136  Q
    |||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  28333934 ggatccggatttcacaggaacgctcagggatcgttggattgatccaagatcccaaaccctagatctaagggctcacaacgcatgggattggaccggtctt 28333835  T
Q  137 gaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcattt 192  Q
    |||||||||||||||||| |||||||| ||| ||||  |||||||||| |||||||    
T  28333834 gaaccggtccggtctagcactctatat-aaaccctagcgcgccggttttttcattt 28333780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 37 - 192
Target Start/End: Complemental strand, 28349036 - 28348882
Alignment:
Q  37 ggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtctt 136  Q
    |||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  28349036 ggatccggatttcacaggaacgctcagggatcgttggattgatccaagatcccaaaccctagatctaagggctcacaacgcatgggattggaccggtctt 28348937  T
Q  137 gaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcattt 192  Q
    |||||||||||||||||| |||||||| ||| ||||  |||||||||| |||||||    
T  28348936 gaaccggtccggtctagcactctatat-aaaccctagcgcgccggttttttcattt 28348882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 28166920 - 28166969
Alignment:
Q  116 gcaggggattggaccggtcttgaaccggtccggtctagcgctctatataa 165  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||    
T  28166920 gcaggggattggaccggtcttgaaccggtccggtctagtggtctatataa 28166969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 14142558 - 14142608
Alignment:
Q  61 cagggatcgttggattgatccaagatcccaaaccctagatctaaaggctca 111  Q
    |||||| ||||||||||||||| ||  ||||||||||||||||||||||||    
T  14142558 cagggagcgttggattgatccaggaagccaaaccctagatctaaaggctca 14142608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 18525098 - 18525048
Alignment:
Q  61 cagggatcgttggattgatccaagatcccaaaccctagatctaaaggctca 111  Q
    |||||| ||||||||||||||| ||  ||||||||||||||||||||||||    
T  18525098 cagggagcgttggattgatccaggaagccaaaccctagatctaaaggctca 18525048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 4653314 - 4653281
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggtctag 153  Q
    ||||||||||||||||||||||||||||||||||    
T  4653314 gggattggaccggtcttgaaccggtccggtctag 4653281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 23012594 - 23012643
Alignment:
Q  62 agggatcgttggattgatccaagatcccaaaccctagatctaaaggctca 111  Q
    ||||| ||||||||||||||| ||  ||||||||||||||||||||||||    
T  23012594 agggagcgttggattgatccaggaagccaaaccctagatctaaaggctca 23012643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 19448559 - 19448511
Alignment:
Q  61 cagggatcgttggattgatccaagatcccaaaccctagatctaaaggct 109  Q
    |||||| ||||||||||||||| ||  ||||||||||||||||||||||    
T  19448559 cagggagcgttggattgatccaggaagccaaaccctagatctaaaggct 19448511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 104
Target Start/End: Original strand, 15365064 - 15365098
Alignment:
Q  70 ttggattgatccaagatcccaaaccctagatctaa 104  Q
    ||||||||||||||||| |||||||||||||||||    
T  15365064 ttggattgatccaagatgccaaaccctagatctaa 15365098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 1733997 - 1734026
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  1733997 gggattggaccggtcttgaaccggtccggt 1734026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 15883279 - 15883308
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  15883279 gggattggaccggtcttgaaccggtccggt 15883308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 15898458 - 15898487
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  15898458 gggattggaccggtcttgaaccggtccggt 15898487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 17904065 - 17904036
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  17904065 gggattggaccggtcttgaaccggtccggt 17904036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 17966888 - 17966917
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  17966888 gggattggaccggtcttgaaccggtccggt 17966917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 17997368 - 17997397
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  17997368 gggattggaccggtcttgaaccggtccggt 17997397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 19703925 - 19703896
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  19703925 gggattggaccggtcttgaaccggtccggt 19703896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 26685098 - 26685069
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  26685098 gggattggaccggtcttgaaccggtccggt 26685069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 47196840 - 47196869
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  47196840 gggattggaccggtcttgaaccggtccggt 47196869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 17786905 - 17786865
Alignment:
Q  42 cggatctcacagggacgctcagggatcgttggattgatcca 82  Q
    |||||| |||||| | |||||||||||||||||||||||||    
T  17786905 cggatcacacaggaaagctcagggatcgttggattgatcca 17786865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 19088426 - 19088386
Alignment:
Q  42 cggatctcacagggacgctcagggatcgttggattgatcca 82  Q
    |||||| |||||| | |||||||||||||||||||||||||    
T  19088426 cggatcacacaggaaagctcagggatcgttggattgatcca 19088386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 19364876 - 19364916
Alignment:
Q  42 cggatctcacagggacgctcagggatcgttggattgatcca 82  Q
    |||||| |||||| | |||||||||||||||||||||||||    
T  19364876 cggatcacacaggaaagctcagggatcgttggattgatcca 19364916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 3e-60; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 36 - 193
Target Start/End: Original strand, 16819643 - 16819800
Alignment:
Q  36 aggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtct 135  Q
    |||| ||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16819643 aggaaacggatctcacagggatactcagggaccgttggattgatccaaggtcccaaaccctagatctaagggctcacaacgcaggggattggaccggtct 16819742  T
Q  136 tgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttg 193  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||    
T  16819743 tgaaccggtccggtctagcgccctatataaaaccctaacgcgccggttttttcatttg 16819800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 36 - 193
Target Start/End: Original strand, 16834884 - 16835041
Alignment:
Q  36 aggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtct 135  Q
    |||| ||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16834884 aggaaacggatctcacagggatactcagggaccgttggattgatccaaggtcccaaaccctagatctaagggctcacaacgcaggggattggaccggtct 16834983  T
Q  136 tgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttg 193  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||    
T  16834984 tgaaccggtccggtctagcgccctatataaaaccctaacgcgccggttttttcatttg 16835041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 36 - 193
Target Start/End: Original strand, 16874865 - 16875022
Alignment:
Q  36 aggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtct 135  Q
    |||| ||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16874865 aggaaacggatctcacagggatactcagggaccgttggattgatccaaggtcccaaaccctagatctaagggctcacaacgcaggggattggaccggtct 16874964  T
Q  136 tgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttg 193  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||    
T  16874965 tgaaccggtccggtctagcgccctatataaaaccctaacgcgccggttttttcatttg 16875022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 36 - 193
Target Start/End: Complemental strand, 32059692 - 32059535
Alignment:
Q  36 aggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtct 135  Q
    |||| ||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  32059692 aggaaacggatctcacagggatactcagggaccgttggattgatccaaggtcccaaaccctagatctaagggctcactacgcaggggattggaccggtct 32059593  T
Q  136 tgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttg 193  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||    
T  32059592 tgaaccggtccggtctagcgccctatataaaaccctaacgcgccggttttttcatttg 32059535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 36 - 193
Target Start/End: Complemental strand, 32044496 - 32044339
Alignment:
Q  36 aggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtct 135  Q
    |||| ||||||||| ||||||  |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  32044496 aggaaacggatctcccagggatactcagggaccgttggattgatccaaggtcccaaaccctagatctaagggctcactacgcaggggattggaccggtct 32044397  T
Q  136 tgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttg 193  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||    
T  32044396 tgaaccggtccggtctagcgccctatataaaaccctaacgcgccggttttttcatttg 32044339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 42 - 192
Target Start/End: Complemental strand, 35763580 - 35763431
Alignment:
Q  42 cggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtcttgaacc 141  Q
    ||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  35763580 cggatttcacaggaatgctcagggatcgttggattgatccaagatcccaaaccctagatctaatggctcacaacgcatgggattggaccggtcttgaacc 35763481  T
Q  142 ggtccggtctagcgctctatataaaagcctaatgcgccggtttattcattt 192  Q
    ||||||||||||| |||||||| ||| ||||  |||||||||| |||||||    
T  35763480 ggtccggtctagcactctatat-aaaccctagcgcgccggttttttcattt 35763431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 10116403 - 10116449
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggtctagcgctctatataaa 166  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||    
T  10116403 gggattggaccggtcttgaaccggtccggtctagtggtctatataaa 10116449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 21693878 - 21693928
Alignment:
Q  61 cagggatcgttggattgatccaagatcccaaaccctagatctaaaggctca 111  Q
    |||||| ||||||||||||||| ||  ||||||||||||||||||||||||    
T  21693878 cagggagcgttggattgatccaggaagccaaaccctagatctaaaggctca 21693928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 21708659 - 21708709
Alignment:
Q  61 cagggatcgttggattgatccaagatcccaaaccctagatctaaaggctca 111  Q
    |||||| ||||||||||||||| ||  ||||||||||||||||||||||||    
T  21708659 cagggagcgttggattgatccaggaagccaaaccctagatctaaaggctca 21708709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 101
Target Start/End: Complemental strand, 39884707 - 39884674
Alignment:
Q  68 cgttggattgatccaagatcccaaaccctagatc 101  Q
    ||||||||||||||||||||||||||||||||||    
T  39884707 cgttggattgatccaagatcccaaaccctagatc 39884674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 101
Target Start/End: Complemental strand, 39900283 - 39900250
Alignment:
Q  68 cgttggattgatccaagatcccaaaccctagatc 101  Q
    ||||||||||||||||||||||||||||||||||    
T  39900283 cgttggattgatccaagatcccaaaccctagatc 39900250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 2731177 - 2731148
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  2731177 gggattggaccggtcttgaaccggtccggt 2731148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 13819449 - 13819478
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  13819449 gggattggaccggtcttgaaccggtccggt 13819478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 111
Target Start/End: Original strand, 29439332 - 29439389
Alignment:
Q  54 ggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctca 111  Q
    |||||||||||   |||| |||||||||| ||  ||||||||||||||||||||||||    
T  29439332 ggacgctcaggagccgttagattgatccaggaagccaaaccctagatctaaaggctca 29439389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 40195038 - 40195067
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  40195038 gggattggaccggtcttgaaccggtccggt 40195067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 28876742 - 28876706
Alignment:
Q  113 aacgcaggggattggaccggtcttgaaccggtccggt 149  Q
    |||| |||||||||||||||||||| |||||||||||    
T  28876742 aacgaaggggattggaccggtcttggaccggtccggt 28876706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 28891952 - 28891916
Alignment:
Q  113 aacgcaggggattggaccggtcttgaaccggtccggt 149  Q
    |||| |||||||||||||||||||| |||||||||||    
T  28891952 aacgaaggggattggaccggtcttggaccggtccggt 28891916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 6e-58; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 36 - 193
Target Start/End: Original strand, 4486592 - 4486749
Alignment:
Q  36 aggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtct 135  Q
    |||| ||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  4486592 aggaaacggatctcacagggatactcagggaccgttggattgatccaaggtcccaaaccctagatctaagggctcacaacgcagggaattggaccggtct 4486691  T
Q  136 tgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttg 193  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||    
T  4486692 tgaaccggtccggtctagcgccctatataaaaccctaacgcgccggttttttcatttg 4486749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 162
Target Start/End: Complemental strand, 17896873 - 17896831
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggtctagcgctctata 162  Q
    |||||||||||||||||||||||||||||||||| | ||||||    
T  17896873 gggattggaccggtcttgaaccggtccggtctaggggtctata 17896831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 554657 - 554628
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  554657 gggattggaccggtcttgaaccggtccggt 554628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 6053467 - 6053496
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  6053467 gggattggaccggtcttgaaccggtccggt 6053496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 14026245 - 14026274
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  14026245 gggattggaccggtcttgaaccggtccggt 14026274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 19669202 - 19669173
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  19669202 gggattggaccggtcttgaaccggtccggt 19669173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 101
Target Start/End: Complemental strand, 19697697 - 19697664
Alignment:
Q  68 cgttggattgatccaagatcccaaaccctagatc 101  Q
    |||| |||||||||||||||||||||||||||||    
T  19697697 cgttagattgatccaagatcccaaaccctagatc 19697664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 21338264 - 21338293
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  21338264 gggattggaccggtcttgaaccggtccggt 21338293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 21378225 - 21378254
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  21378225 gggattggaccggtcttgaaccggtccggt 21378254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 24462254 - 24462283
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  24462254 gggattggaccggtcttgaaccggtccggt 24462283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 44570839 - 44570810
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  44570839 gggattggaccggtcttgaaccggtccggt 44570810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1536 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold1536
Description:

Target: scaffold1536; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 36 - 193
Target Start/End: Complemental strand, 1196 - 1039
Alignment:
Q  36 aggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtct 135  Q
    |||| ||||||||||||||||  | |||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  1196 aggaaacggatctcacagggatacacagggaccgttggattgatccaaggtcctaaaccctagatctaagggctcacaacgcaggggattggaccggtct 1097  T
Q  136 tgaaccggtccggtctagcgctctatataaaagcctaatgcgccggtttattcatttg 193  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||    
T  1096 tgaaccggtccggtctagcgccctatataaaaccctaacgcgccggttttttcatttg 1039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 47767224 - 47767122
Alignment:
Q  33 caaaggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccgg 132  Q
    ||||||| ||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  47767224 caaaggaaacggatctcacagggatactcagggaccgttggattgatccaaggtcccaaaccctagatctaagggctcacaacgcaagggattggaccgg 47767125  T
Q  133 tct 135  Q
    |||    
T  47767124 tct 47767122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 16653689 - 16653735
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggtctagcgctctatataaa 166  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||    
T  16653689 gggattggaccggtcttgaaccggtccggtctagtggtctatataaa 16653735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 16404846 - 16404800
Alignment:
Q  61 cagggatcgttggattgatccaagatcccaaaccctagatctaaagg 107  Q
    |||||| ||||||||||||||| ||  ||||||||||||||||||||    
T  16404846 cagggagcgttggattgatccaggaagccaaaccctagatctaaagg 16404800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 20344332 - 20344382
Alignment:
Q  61 cagggatcgttggattgatccaagatcccaaaccctagatctaaaggctca 111  Q
    |||||| |||| |||||||||| ||  ||||||||||||||||||||||||    
T  20344332 cagggagcgttagattgatccaggaaaccaaaccctagatctaaaggctca 20344382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 150
Target Start/End: Original strand, 36088884 - 36088914
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggtc 150  Q
    |||||||||||||||||||||||||||||||    
T  36088884 gggattggaccggtcttgaaccggtccggtc 36088914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 10938098 - 10938069
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  10938098 gggattggaccggtcttgaaccggtccggt 10938069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 10957289 - 10957260
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  10957289 gggattggaccggtcttgaaccggtccggt 10957260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 10972512 - 10972483
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  10972512 gggattggaccggtcttgaaccggtccggt 10972483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 28579572 - 28579543
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  28579572 gggattggaccggtcttgaaccggtccggt 28579543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 28594998 - 28594969
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  28594998 gggattggaccggtcttgaaccggtccggt 28594969  T

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Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 47353413 - 47353442
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  47353413 gggattggaccggtcttgaaccggtccggt 47353442  T

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Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 18292667 - 18292631
Alignment:
Q  113 aacgcaggggattggaccggtcttgaaccggtccggt 149  Q
    |||| |||||||||||||||||||| |||||||||||    
T  18292667 aacgaaggggattggaccggtcttggaccggtccggt 18292631  T

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Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 20455825 - 20455765
Alignment:
Q  89 caaaccctagatctaaaggctcacaacgcaggggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||| || |||  | || | |||||||||||||||||||| |||||||||||    
T  20455825 caaaccctagatccaacggccaagaatggaggggattggaccggtcttggaccggtccggt 20455765  T

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Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 21480644 - 21480608
Alignment:
Q  113 aacgcaggggattggaccggtcttgaaccggtccggt 149  Q
    |||| |||||||||||||||||||| |||||||||||    
T  21480644 aacgaaggggattggaccggtcttggaccggtccggt 21480608  T

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Target: scaffold0021 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 179254 - 179180
Alignment:
Q  37 ggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctca 111  Q
    |||||||||||||||| |||||||||| |||||||||||||||||| ||  ||||||||||||||||||||||||    
T  179254 ggatacggatctcacatggacgctcagagatcgttggattgatccaggaagccaaaccctagatctaaaggctca 179180  T

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Target: scaffold0021; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 98317 - 98267
Alignment:
Q  61 cagggatcgttggattgatccaagatcccaaaccctagatctaaaggctca 111  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||||||||    
T  98317 cagggatcgttggattgatccaggaagccaaaccctagatctaaaggctca 98267  T

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Target: scaffold0750 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 152 - 202
Alignment:
Q  61 cagggatcgttggattgatccaagatcccaaaccctagatctaaaggctca 111  Q
    |||||| ||||||||||||||| ||  ||||||||||||||||||||||||    
T  152 cagggagcgttggattgatccaggaagccaaaccctagatctaaaggctca 202  T

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Target: scaffold0347 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 17245 - 17295
Alignment:
Q  61 cagggatcgttggattgatccaagatcccaaaccctagatctaaaggctca 111  Q
    |||||| ||||||||||||||| ||  ||||||||||||||||||||||||    
T  17245 cagggagcgttggattgatccaggaagccaaaccctagatctaaaggctca 17295  T

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Target: scaffold0225 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 273 - 306
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggtctag 153  Q
    ||||||||||||||||||||||||||||||||||    
T  273 gggattggaccggtcttgaaccggtccggtctag 306  T

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Target: scaffold0393 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 149
Target Start/End: Complemental strand, 6212 - 6100
Alignment:
Q  37 ggatacggatctcacagggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaaaggctcacaacgcaggggattggaccggtctt 136  Q
    |||| |||||| ||| || | |||||||||||||||||| |||||| ||  | ||| ||||||||||||||| || | |  |||| |||||||| |  ||    
T  6212 ggatccggatcacacgggaaagctcagggatcgttggatcgatccaggaagcaaaaacctagatctaaaggcgcagatcaaagggaattggaccagaatt 6113  T
Q  137 gaaccggtccggt 149  Q
    |||||||||||||    
T  6112 gaaccggtccggt 6100  T

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Target: scaffold0184 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 21929 - 21881
Alignment:
Q  63 gggatcgttggattgatccaagatcccaaaccctagatctaaaggctca 111  Q
    |||| ||||||||||||||| ||  ||||||||||||||||||||||||    
T  21929 gggagcgttggattgatccaggaaaccaaaccctagatctaaaggctca 21881  T

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Target: scaffold0078 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 50915 - 50963
Alignment:
Q  63 gggatcgttggattgatccaagatcccaaaccctagatctaaaggctca 111  Q
    |||| ||||||||||||||| ||  ||||||||||||||||||||||||    
T  50915 gggagcgttggattgatccaggaaaccaaaccctagatctaaaggctca 50963  T

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Target: scaffold1665 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1665
Description:

Target: scaffold1665; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 838 - 881
Alignment:
Q  58 gctcagggatcgttggattgatccaagatcccaaaccctagatc 101  Q
    ||||||| | |||||||||||||||||| |||||||||||||||    
T  838 gctcaggaaccgttggattgatccaagaccccaaaccctagatc 881  T

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Target: scaffold0740 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 991 - 945
Alignment:
Q  61 cagggatcgttggattgatccaagatcccaaaccctagatctaaagg 107  Q
    |||||| ||||||||||||||| ||  ||||||||||||||||||||    
T  991 cagggagcgttggattgatccaggaagccaaaccctagatctaaagg 945  T

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Target: scaffold0260 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 6655 - 6705
Alignment:
Q  61 cagggatcgttggattgatccaagatcccaaaccctagatctaaaggctca 111  Q
    |||||| |||| |||||||||| ||  ||||||||||||||||||||||||    
T  6655 cagggagcgttagattgatccaggaaaccaaaccctagatctaaaggctca 6705  T

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Target: scaffold0235 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 209 - 259
Alignment:
Q  54 ggacgctcagggatcgttggattgatccaagatcccaaaccctagatctaa 104  Q
    |||||| |||| | |||||||| |||||||||| |||||||||||||||||    
T  209 ggacgcacaggaaccgttggatagatccaagatgccaaaccctagatctaa 259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 162
Target Start/End: Complemental strand, 22443 - 22401
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggtctagcgctctata 162  Q
    |||||||||||||||||||| ||||||||||||| | ||||||    
T  22443 gggattggaccggtcttgaatcggtccggtctaggggtctata 22401  T

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Target: scaffold0049 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 162
Target Start/End: Complemental strand, 37093 - 37051
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggtctagcgctctata 162  Q
    ||||||||||||||||||||||||| |||||||| | ||||||    
T  37093 gggattggaccggtcttgaaccggttcggtctaggggtctata 37051  T

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Target: scaffold1648 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1648
Description:

Target: scaffold1648; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 835 - 864
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  835 gggattggaccggtcttgaaccggtccggt 864  T

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Target: scaffold0061 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 32876 - 32905
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  32876 gggattggaccggtcttgaaccggtccggt 32905  T

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Target: scaffold0017 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 165915 - 165886
Alignment:
Q  120 gggattggaccggtcttgaaccggtccggt 149  Q
    ||||||||||||||||||||||||||||||    
T  165915 gggattggaccggtcttgaaccggtccggt 165886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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