View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2673_high_28 (Length: 272)
Name: NF2673_high_28
Description: NF2673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2673_high_28 |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 18 - 260
Target Start/End: Original strand, 36598979 - 36599220
Alignment:
| Q |
18 |
atattgtaccacgaagaaaaacaaaagatgaattttgggaagaaactctctaaaccaggaatatatgtaactttaggaggattcaaattcttatttttaa |
117 |
Q |
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| T |
36598979 |
atattgtaccacgaagaaaaacaaaagatgaattttgggaagaaattctctaaaccaggaatatatgtaactttaggaagattcaaattcttatttttaa |
36599078 |
T |
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| Q |
118 |
aagaacaataggaacaatctatagaatacatatatgcataatattttattttaactgttaaccaaagacagagacatatatataattgctcc-tttttca |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |
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| T |
36599079 |
aagaacaataggaacaatctatagaatacatatatgcataatattttattttaactgttaaccaaagacagagac--atatataattgctccttttttca |
36599176 |
T |
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| Q |
217 |
gtttctattatttactgaggatattaacaaacttcagtcgtctc |
260 |
Q |
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| T |
36599177 |
gtttctattatttacggaggatattaacaaacttcagtcgtctc |
36599220 |
T |
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