View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2673_high_38 (Length: 227)
Name: NF2673_high_38
Description: NF2673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2673_high_38 |
 | |
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| [»] chr8 (2 HSPs) |
| |
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| [»] chr5 (1 HSPs) |
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| [»] chr7 (24 HSPs) |
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| [»] chr2 (10 HSPs) |
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| [»] chr4 (6 HSPs) |
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| [»] chr1 (4 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 5 - 227
Target Start/End: Original strand, 43744490 - 43744712
Alignment:
| Q |
5 |
caatagcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagcc |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43744490 |
caatagcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagcc |
43744589 |
T |
|
| Q |
105 |
accaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattg |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43744590 |
accaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattg |
43744689 |
T |
|
| Q |
205 |
atttcctcaaacttagcacgagt |
227 |
Q |
| |
|
|||||||||||||||| |||||| |
|
|
| T |
43744690 |
atttcctcaaacttagtacgagt |
43744712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 170
Target Start/End: Original strand, 12528182 - 12528343
Alignment:
| Q |
9 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
108 |
Q |
| |
|
|||||| |||||||||||||| ||| |||| | || ||||| || ||||| ||||||||||| || | ||||| ||||||||||| ||||||||| |
|
|
| T |
12528182 |
agcaacagcctcatcagggttgatgctcttgtataactccttgcccttgaaaaactcctgcaatagctgcttcactttgggaatcctagacgagccacca |
12528281 |
T |
|
| Q |
109 |
acaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaac |
170 |
Q |
| |
|
||||| |||| ||||| || | |||||||||||||| ||||| || | |||||| ||||| |
|
|
| T |
12528282 |
acaagtacaatatcatctacactactcttgtccatcttagcatcggtcaaacaactttcaac |
12528343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 9 - 227
Target Start/End: Original strand, 28219596 - 28219814
Alignment:
| Q |
9 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
108 |
Q |
| |
|
|||||| |||||||||||||||||| |||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||| ||| |
|
|
| T |
28219596 |
agcaacagcctcatcagggttaatgctcttacacaattccttccctccaaaaaattcctgcagtagttgttgtacttttggaattctagaggagcctcca |
28219695 |
T |
|
| Q |
109 |
acaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgattt |
208 |
Q |
| |
|
|||||||||||||| |||| ||| ||||||||||| ||||||||||| ||||| ||||||||| ||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
28219696 |
acaagaacaacatcgtgtacagccctcttgtccatattggcatcagtgagacacctctcaacagttttcaaacactcattgaaaagatccatattgattt |
28219795 |
T |
|
| Q |
209 |
cctcaaacttagcacgagt |
227 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
28219796 |
cctcaaacttagcacgagt |
28219814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 111; Significance: 4e-56; HSPs: 24)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 227
Target Start/End: Original strand, 3146942 - 3147160
Alignment:
| Q |
9 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
108 |
Q |
| |
|
|||||| |||||||||||||| ||| | ||||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |
|
|
| T |
3146942 |
agcaacggcctcatcagggttgatgctgttacacagatgcttccctgcaaaaaattcctgcaatagttgttgcacttttggaattctagacgagccaccg |
3147041 |
T |
|
| Q |
109 |
acaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgattt |
208 |
Q |
| |
|
||||| || |||||||||||||| || |||||||| | | |||||| | |||||||| |||| ||| ||||||||| |||| |||||||||||||||| |
|
|
| T |
3147042 |
acaaggacgacatcatgtatagcacttttgtccatttcgacatcagcgaaacaactcttaacagtttccaaacactcagtgaaaagatccatattgattt |
3147141 |
T |
|
| Q |
209 |
cctcaaacttagcacgagt |
227 |
Q |
| |
|
|||||||||| |||||||| |
|
|
| T |
3147142 |
cctcaaacttggcacgagt |
3147160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 76 - 227
Target Start/End: Original strand, 8646622 - 8646773
Alignment:
| Q |
76 |
tgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattt |
175 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| || |||||||||||||| ||| |
|
|
| T |
8646622 |
tgttgtacttttggaattctagaggagccaccaacaagaacaacatcatggatagaactcttgtccatcttggcatcattatgacaactctcaacagttt |
8646721 |
T |
|
| Q |
176 |
tcaaacactcgttgaagagatccatattgatttcctcaaacttagcacgagt |
227 |
Q |
| |
|
|||||| ||| |||| ||||||||||||||| | ||||| || |||||||| |
|
|
| T |
8646722 |
ccaaacattcgatgaacagatccatattgattgcgtcaaatttggcacgagt |
8646773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 77 - 226
Target Start/End: Complemental strand, 8674043 - 8673894
Alignment:
| Q |
77 |
gttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaatttt |
176 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| ||||||| ||| ||| || ||||||||||||||||| |||||||| |||||||| ||| |
|
|
| T |
8674043 |
gttgtacttttggaattctagaggagccaccaacaaggacaacataatggataaaacttatgtccatcttggcatcaataagacaattctcaacagtttc |
8673944 |
T |
|
| Q |
177 |
caaacactcgttgaagagatccatattgatttcctcaaacttagcacgag |
226 |
Q |
| |
|
||||||||||||||| |||| |||||||||||||||||||| ||||||| |
|
|
| T |
8673943 |
caaacactcgttgaaaagattgatattgatttcctcaaacttggcacgag |
8673894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 8 - 227
Target Start/End: Original strand, 8616358 - 8616577
Alignment:
| Q |
8 |
tagcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacc |
107 |
Q |
| |
|
||||||| ||||||||||| || |||||||| |||||||||||||| | ||||| || |||||||| || ||||| ||||||||||| |||||||| |
|
|
| T |
8616358 |
tagcaacagcctcatcaggattgatgttcttgcacaaatccttcccatcgaaaaagtcactcaatagttcctgcactttaggaatcctagacgagccacc |
8616457 |
T |
|
| Q |
108 |
aacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgatt |
207 |
Q |
| |
|
|||||||||| ||||| || | ||||| || ||||| | |||| ||| ||||||||||||| | || | ||||||||| || || |||||||||||| |
|
|
| T |
8616458 |
gacaagaacaatatcatctacactactcttctctatcttagaatcattaaaacaactctcaacagtctttatacactcgttaaaaaggtccatattgatt |
8616557 |
T |
|
| Q |
208 |
tcctcaaacttagcacgagt |
227 |
Q |
| |
|
|||||||||||| ||||||| |
|
|
| T |
8616558 |
tcctcaaacttaacacgagt |
8616577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 227
Target Start/End: Original strand, 6789190 - 6789408
Alignment:
| Q |
9 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
108 |
Q |
| |
|
|||||| |||||||||||||| ||| || | ||||||||||| || |||| ||| |||||||||||||| ||||| ||||| ||||| || |||||| |
|
|
| T |
6789190 |
agcaacagcctcatcagggttgatgctcatgcacaaatcctttcccatgaaaacttcttgcaatagttgttgcactttgggaattctagaagacccacca |
6789289 |
T |
|
| Q |
109 |
acaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgattt |
208 |
Q |
| |
|
||||| |||||||||| || | |||||||||||||| || ||| ||||||||||||||| | |||| |||||| || || | |||||||||||||| |
|
|
| T |
6789290 |
acaaggacaacatcatttacaatactcttgtccatcttagcgtcaacaagacaactctcaacggtcttcatacactcattaaaaatatccatattgattt |
6789389 |
T |
|
| Q |
209 |
cctcaaacttagcacgagt |
227 |
Q |
| |
|
|||||||||| || ||||| |
|
|
| T |
6789390 |
cctcaaacttggcccgagt |
6789408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 227
Target Start/End: Complemental strand, 27831365 - 27831147
Alignment:
| Q |
9 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
108 |
Q |
| |
|
|||||| ||||||||||| || ||| |||| ||||||||||| || ||||| ||| |||||| || || ||||| |||||||| || ||||||||| |
|
|
| T |
27831365 |
agcaacagcctcatcaggattgatgctcttgcacaaatcctttcccttgaaaaagtccgccaatagctgctgcactttgggaatccttgaagagccacca |
27831266 |
T |
|
| Q |
109 |
acaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgattt |
208 |
Q |
| |
|
||||| |||||||||| |||| |||||||||||||| | ||||| ||||||||||||||| | | || ||| || ||||| || ||||||||||||| |
|
|
| T |
27831265 |
acaaggacaacatcatctatactactcttgtccatcttagagtcagtgagacaactctcaacagtctccatacattcattgaaaaggtccatattgattt |
27831166 |
T |
|
| Q |
209 |
cctcaaacttagcacgagt |
227 |
Q |
| |
|
|||||||||| |||||||| |
|
|
| T |
27831165 |
cctcaaactttgcacgagt |
27831147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 226
Target Start/End: Original strand, 8664081 - 8664228
Alignment:
| Q |
77 |
gttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaatttt |
176 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||| ||||||| ||| ||| ||| ||||||||| |||| | ||||||||||||||||| ||| |
|
|
| T |
8664081 |
gttgtactttcggaattctagaggagccaccaacaaggacaacataatggataaaactcatgtccatctcggcagtaataagacaactctcaacagtttc |
8664180 |
T |
|
| Q |
177 |
caaacactcgttgaagagatccatattgatttcctcaaacttagcacgag |
226 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||| ||| |||| ||||||| |
|
|
| T |
8664181 |
caaaca--cgttgaaaagatccatattgatttcatcatacttggcacgag |
8664228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 227
Target Start/End: Original strand, 17259919 - 17260137
Alignment:
| Q |
9 |
agcaactgcctcatcagggttaatgttcttacacaaatcctt-ccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacc |
107 |
Q |
| |
|
|||||| |||||||||||||| ||| |||| || || ||||| |||| || |||| ||||||||||||| || ||||| ||||||||||| || ||||| |
|
|
| T |
17259919 |
agcaacagcctcatcagggttgatgctcttgcataattccttacccttgaagaaat-cctgcaatagttgctgcactttcggaatcctagaagatccacc |
17260017 |
T |
|
| Q |
108 |
aacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgatt |
207 |
Q |
| |
|
|||||| |||||||||| || ||||||||| ||||| ||||| ||||||| |||||||||| | || ||||| | || || |||||||||||| |
|
|
| T |
17260018 |
aacaaggacaacatcatcaattctgctcttgtcaatcttaccatcactaagacacttctcaacaatctccatgcactcataaaaaaggtccatattgatt |
17260117 |
T |
|
| Q |
208 |
tcctcaaacttagcacgagt |
227 |
Q |
| |
|
|| |||||||| |||||||| |
|
|
| T |
17260118 |
tcttcaaacttggcacgagt |
17260137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 17267674 - 17267835
Alignment:
| Q |
66 |
ctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactc |
165 |
Q |
| |
|
|||||||||||| || ||||| ||||||||||| || ||||||||||| |||||||||| | ||||||||| ||||| |||||| ||||||| || |
|
|
| T |
17267674 |
ctgcaatagttgctgcactttcggaatcctagaagacccaccaacaaggacaacatcatcaactctgctcttgtcaatcttagcatcactaagacacttc |
17267773 |
T |
|
| Q |
166 |
tcaacaattttcaaacactcgttgaagagatccatattgatttcctcaaacttagcacgagt |
227 |
Q |
| |
|
|||||||| | || ||||| | || || ||||||||||||||||||||||| |||||||| |
|
|
| T |
17267774 |
tcaacaatctccatgcactcatcaaaaaggtccatattgatttcctcaaacttggcacgagt |
17267835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 143
Target Start/End: Complemental strand, 8636833 - 8636699
Alignment:
| Q |
9 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
108 |
Q |
| |
|
|||||| |||||||||| ||| ||| ||||||||| |||||| | ||||| ||||| |||||||| || || |||||||||||||||||||||||| |
|
|
| T |
8636833 |
agcaacagcctcatcagcgttgatgctcttacacagttccttcgccttaaaaatgtcctgtaatagttgctgcacctttggaatcctagaggagccacca |
8636734 |
T |
|
| Q |
109 |
acaagaacaacatcatgtatagcgctcttgtccat |
143 |
Q |
| |
|
||||| |||||||||| |||| |||||| ||||| |
|
|
| T |
8636733 |
acaaggacaacatcatctatattgctcttatccat |
8636699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 166
Target Start/End: Complemental strand, 7878175 - 7878066
Alignment:
| Q |
57 |
aaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagta |
156 |
Q |
| |
|
|||||| ||||||||||| || || ||||| |||||||||| || ||||||||||| |||||||||| || | | ||||||||||| | ||||||||| |
|
|
| T |
7878175 |
aaaaaagtcctgcaatagctgctgcactttgagaatcctagatgatccaccaacaagtacaacatcatctacattgttcttgtccatcatagcatcagta |
7878076 |
T |
|
| Q |
157 |
agacaactct |
166 |
Q |
| |
|
|||||||||| |
|
|
| T |
7878075 |
agacaactct |
7878066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 218
Target Start/End: Original strand, 8576004 - 8576213
Alignment:
| Q |
9 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
108 |
Q |
| |
|
|||||| |||||||||||||| ||| ||||||| || |||||||| |||| ||||| ||||| ||| ||||| ||||||||||| || |||||| |
|
|
| T |
8576004 |
agcaacagcctcatcagggttgatgctcttacataattccttccccttgaaaacctcctgtaatagctgtctcactttaggaatcctagaagaaccacca |
8576103 |
T |
|
| Q |
109 |
acaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgattt |
208 |
Q |
| |
|
||||| |||||||||| || | ||||||||||||| ||||||| ||||||| | | |||| | |||| ||||| | ||||| | |||||| |||| |
|
|
| T |
8576104 |
acaaggacaacatcatctacactattcttgtccatcttagcatcagcaagacaaatattaacagtattcatacacttttcaaagaggttcatattcattt |
8576203 |
T |
|
| Q |
209 |
cctcaaactt |
218 |
Q |
| |
|
|||||||||| |
|
|
| T |
8576204 |
cctcaaactt |
8576213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 163
Target Start/End: Original strand, 8545311 - 8545465
Alignment:
| Q |
9 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
108 |
Q |
| |
|
|||||| |||||||||||||||||| |||| || || |||||||| |||||| ||||| ||||| ||| ||||| ||||||||||| || || ||| |
|
|
| T |
8545311 |
agcaacagcctcatcagggttaatgctcttgcataattccttccccttaaaaaactcctgtaatagctgtctcactttaggaatcctagaagaaccgcca |
8545410 |
T |
|
| Q |
109 |
acaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaac |
163 |
Q |
| |
|
||||| |||||||||| || | | |||||||||||| |||||| |||||||| |
|
|
| T |
8545411 |
acaaggacaacatcatctacactacccttgtccatcttagcatcaacaagacaac |
8545465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 8659187 - 8659259
Alignment:
| Q |
155 |
taagacaactctcaacaattttcaaacactcgttgaagagatccatattgatttcctcaaacttagcacgagt |
227 |
Q |
| |
|
||||||||||||||||| |||||| |||||| || || ||||||||||| |||||||||||| | |||||||| |
|
|
| T |
8659187 |
taagacaactctcaacagttttcatacactcattaaaaagatccatattcatttcctcaaacctggcacgagt |
8659259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 218
Target Start/End: Complemental strand, 8586197 - 8585987
Alignment:
| Q |
8 |
tagcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacc |
107 |
Q |
| |
|
||||||| ||||||||||| || |||||||| || ||||| ||||| || || || |||||||| |||||||| ||||| || || |||||||| |
|
|
| T |
8586197 |
tagcaacagcctcatcaggattgatgttcttgcataaatctttcccattgaagaagtcactcaatagttcctgtactttgggaattctggacgagccacc |
8586098 |
T |
|
| Q |
108 |
aacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgatt |
207 |
Q |
| |
|
||||| |||| ||| | || | | |||| || ||||| | ||| |||||||||||||||||| | || | |||||| || || || |||||||||||| |
|
|
| T |
8586097 |
gacaaggacaatatcgtctacaccattcttctctatcttagaatcggtaagacaactctcaacagtatttatacactcattaaaaaggtccatattgatt |
8585998 |
T |
|
| Q |
208 |
tcctcaaactt |
218 |
Q |
| |
|
||||||||||| |
|
|
| T |
8585997 |
tcctcaaactt |
8585987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 227
Target Start/End: Original strand, 1301211 - 1301356
Alignment:
| Q |
82 |
acttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaac |
181 |
Q |
| |
|
||||| ||||||||||| |||||||| |||||||||| ||||| ||| | ||| || || || | ||| |||||||||||||||| |||| || |
|
|
| T |
1301211 |
actttgggaatcctagacgagccacccacaagaacaatatcatcgatatcactcatgcatatttttgaatcgctaagacaactctcaacggtttttgtac |
1301310 |
T |
|
| Q |
182 |
actcgttgaagagatccatattgatttcctcaaacttagcacgagt |
227 |
Q |
| |
|
|||| || || ||||||||||| |||||||||||||| |||||||| |
|
|
| T |
1301311 |
actcattaaaaagatccatattaatttcctcaaacttggcacgagt |
1301356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 152
Target Start/End: Original strand, 8102403 - 8102488
Alignment:
| Q |
67 |
tgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatc |
152 |
Q |
| |
|
||||| ||||| || ||||| |||||||||| || ||||||||||||||||||||||| | | ||||||||||||||| ||||| |
|
|
| T |
8102403 |
tgcaacagttgctgaactttgggaatcctagttgaaccaccaacaagaacaacatcatgaactgtgctcttgtccatcttagcatc |
8102488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 218
Target Start/End: Original strand, 8569989 - 8570198
Alignment:
| Q |
9 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
108 |
Q |
| |
|
|||||| |||||||||||||||||| | || || || |||||||| ||||| || || ||||| || ||||| ||||||||||| || |||||| |
|
|
| T |
8569989 |
agcaacagcctcatcagggttaatgctgttgcataattccttcccctggaaaaactcttgtaatagctgcctcactttaggaatcctagaagaaccacca |
8570088 |
T |
|
| Q |
109 |
acaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgattt |
208 |
Q |
| |
|
||||| |||||||||| || | |||| |||||||| ||||||| ||||||||| | |||| ||| || ||||| | ||||| | |||||| |||| |
|
|
| T |
8570089 |
acaaggacaacatcatctacactattcttttccatcttagcatcagcaagacaactattaacagtttccatacacttttcaaagaggttcatattcattt |
8570188 |
T |
|
| Q |
209 |
cctcaaactt |
218 |
Q |
| |
|
|||||||||| |
|
|
| T |
8570189 |
cctcaaactt |
8570198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 227
Target Start/End: Original strand, 8654201 - 8654346
Alignment:
| Q |
82 |
acttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaac |
181 |
Q |
| |
|
||||| ||||||||||| |||||||| || || |||||||||| ||| | |||||| ||||| | ||| | |||||||| |||||||| || | || |
|
|
| T |
8654201 |
actttgggaatcctagacgagccacccacgagtacaacatcatcaatatcattcttgtatatctttgaatctctgagacaactgtcaacaatattgatac |
8654300 |
T |
|
| Q |
182 |
actcgttgaagagatccatattgatttcctcaaacttagcacgagt |
227 |
Q |
| |
|
|||| ||||| | |||||||| ||||||||||| ||||||||||| |
|
|
| T |
8654301 |
actcattgaaaaagtccatattaatttcctcaaatttagcacgagt |
8654346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 29582331 - 29582231
Alignment:
| Q |
9 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
108 |
Q |
| |
|
|||||| |||||||||||||| ||| || | |||||||||||||| |||||||| |||||||| || || ||||| ||||| ||||| ||||||||| |
|
|
| T |
29582331 |
agcaacagcctcatcagggttgatgctcatgcacaaatccttccccttgaaaaattcttgcaatagctgatgcactttgggaattctagaagagccacca |
29582232 |
T |
|
| Q |
109 |
a |
109 |
Q |
| |
|
| |
|
|
| T |
29582231 |
a |
29582231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 8581378 - 8581493
Alignment:
| Q |
9 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
108 |
Q |
| |
|
|||||| |||||||||||||| ||| |||| || || |||||||| ||||| ||||| ||||| ||| ||||| ||||||||||| || |||||| |
|
|
| T |
8581378 |
agcaacagcctcatcagggttgatgctcttgcataattccttcccctggaaaaactcctgtaatagctgtctcactttaggaatcctagaagaaccacca |
8581477 |
T |
|
| Q |
109 |
acaagaacaacatcat |
124 |
Q |
| |
|
||||| |||||||||| |
|
|
| T |
8581478 |
acaaggacaacatcat |
8581493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 151
Target Start/End: Original strand, 8590364 - 8590458
Alignment:
| Q |
57 |
aaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcat |
151 |
Q |
| |
|
|||||| || |||||||| || || ||||| ||||||||||| || ||||||||||| |||||||||| || | | ||||||||||||| |||| |
|
|
| T |
8590364 |
aaaaaagtcttgcaatagctgctgcactttgggaatcctagaagaaccaccaacaagtacaacatcatctacaatgttcttgtccatcttagcat |
8590458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 8383308 - 8383204
Alignment:
| Q |
67 |
tgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactct |
166 |
Q |
| |
|
|||||||| | ||| ||||| |||||||| || || ||||| | ||||||||||||| || | ||||||| |||||| |||||||||||||| |||| |
|
|
| T |
8383308 |
tgcaatagctcttgcactttgggaatcctcgaagaaccaccgatgagaacaacatcatctacactactcttgttcatcttagcatcagtaagacagctct |
8383209 |
T |
|
| Q |
167 |
caaca |
171 |
Q |
| |
|
||||| |
|
|
| T |
8383208 |
caaca |
8383204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 152
Target Start/End: Complemental strand, 8017845 - 8017760
Alignment:
| Q |
67 |
tgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatc |
152 |
Q |
| |
|
||||| ||||| || ||||| ||||| |||| || || |||||||||||||||||||| | || | ||||||||||||| ||||| |
|
|
| T |
8017845 |
tgcaacagttgctgaactttgggaattctagttgaaccgccaacaagaacaacatcatgaacagagttcttgtccatcttagcatc |
8017760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 94; Significance: 5e-46; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 58 - 227
Target Start/End: Original strand, 43625139 - 43625308
Alignment:
| Q |
58 |
aaaaattcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaa |
157 |
Q |
| |
|
||||| |||||||| || |||| |||||||||||| ||||||||||| |||||||| |||||||| || ||||| |||||||||| |||||||||| ||| |
|
|
| T |
43625139 |
aaaaactcctgcaacagctgttttacttttggaattctagaggagccgccaacaaggacaacatcgtggatagcactcttgtccaacttggcatcaataa |
43625238 |
T |
|
| Q |
158 |
gacaactctcaacaattttcaaacactcgttgaagagatccatattgatttcctcaaacttagcacgagt |
227 |
Q |
| |
|
||||||||| |||| ||||||||||||||||||| ||||||||||| ||||| ||||| || |||||||| |
|
|
| T |
43625239 |
gacaactcttaacagttttcaaacactcgttgaaaagatccatatttatttcatcaaatttggcacgagt |
43625308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 14703096 - 14703295
Alignment:
| Q |
19 |
tcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaa |
118 |
Q |
| |
|
||||||||||||||| | || ||||| |||||||| ||||| ||||| |||| ||| |||||||| ||||||| ||| || ||||| |||||||||| |
|
|
| T |
14703096 |
tcatcagggttaatgctgttgcacaactccttcccctggaaaaagtcctgtaataattgctgtactttgggaatccgagaagacccaccgacaagaacaa |
14703195 |
T |
|
| Q |
119 |
catcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgatttcctcaaactt |
218 |
Q |
| |
|
|||||| || |||||||||||||| |||||| ||||||||||||||||||| |||| |||||| || || | |||||||| ||||| |||||||| |
|
|
| T |
14703196 |
catcatctactctactcttgtccatcttagcatcaataagacaactctcaacaatcttcacacactcattaaaaaagtccatattcatttcttcaaactt |
14703295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 12245896 - 12245734
Alignment:
| Q |
9 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
108 |
Q |
| |
|
|||||| ||||| |||||||||||| |||| ||||| |||||||| ||||| ||||| ||||| ||||| ||||| ||||||||||| || |||||| |
|
|
| T |
12245896 |
agcaacagcctcgtcagggttaatgctcttgcacaattccttcccgttgaaaaagtcctgtaatagctgttggactttgggaatcctagaagatccacca |
12245797 |
T |
|
| Q |
109 |
acaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaaca |
171 |
Q |
| |
|
||||| |||| ||||| ||||| |||||||||||||| ||||| ||| ||||||||||||| |
|
|
| T |
12245796 |
acaagtacaaaatcatctatagtactcttgtccatctttgcatccataatacaactctcaaca |
12245734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 11999093 - 11999247
Alignment:
| Q |
16 |
gcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaa |
115 |
Q |
| |
|
|||||||||||||||||| |||| ||||| |||||||| ||||| || || ||||| ||||| ||||| ||| ||||||| || ||||||||||| | |
|
|
| T |
11999093 |
gcctcatcagggttaatgctcttgcacaactccttcccgttgaaaaagtcatgtaatagctgttggactttggga-tcctagaagatccaccaacaagta |
11999191 |
T |
|
| Q |
116 |
caacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaaca |
171 |
Q |
| |
|
||||||||| ||||| |||||||||||||| ||||| ||| ||||||||||||| |
|
|
| T |
11999192 |
caacatcatctatagtactcttgtccatctttgcatccataatacaactctcaaca |
11999247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 227
Target Start/End: Complemental strand, 16662482 - 16662264
Alignment:
| Q |
9 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccc-tgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacc |
107 |
Q |
| |
|
|||||| |||||||||||||| ||| |||| ||||| |||||||| | || || || | |||||| || || ||||||||||||||||| ||||| || |
|
|
| T |
16662482 |
agcaacagcctcatcagggttgatgctcttgcacaactccttcccattgaagaagttac-gcaataattcctgcacttttggaatcctagacgagccccc |
16662384 |
T |
|
| Q |
108 |
aacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgatt |
207 |
Q |
| |
|
|||||||||| |||||||| | | | |||||||||||| | ||| || ||||||||||||||| |||| ||||||||| || || ||||||||||| |
|
|
| T |
16662383 |
gacaagaacaatatcatgtacaccccccttgtccatctttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaaggcccatattgatt |
16662284 |
T |
|
| Q |
208 |
tcctcaaacttagcacgagt |
227 |
Q |
| |
|
|| |||||||| ||||||| |
|
|
| T |
16662283 |
tcttcaaacttgacacgagt |
16662264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 218
Target Start/End: Original strand, 12234368 - 12234576
Alignment:
| Q |
9 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
108 |
Q |
| |
|
|||||| ||||| ||||||||||| |||| |||| |||||||| ||||| |||||||||||||| || ||||| |||||||||||||| || ||| |
|
|
| T |
12234368 |
agcaaccgcctc-tcagggttaatactcttgcacagctccttccccttgaaaaaatcctgcaatagttgctgcactttgggaatcctagaggacccgcca |
12234466 |
T |
|
| Q |
109 |
acaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgattt |
208 |
Q |
| |
|
| ||| ||||| |||| | || ||||||||||| |||||| ||||||||||||||||||| |||| |||||| | | ||||||||||| |||| |
|
|
| T |
12234467 |
ataaggacaacttcatccaccctacttttgtccatcttagcatcactaagacaactctcaacaatcttcatacactcaataagaagatccatattcattt |
12234566 |
T |
|
| Q |
209 |
cctcaaactt |
218 |
Q |
| |
|
|||||||||| |
|
|
| T |
12234567 |
cctcaaactt |
12234576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 82 - 224
Target Start/End: Complemental strand, 16657934 - 16657792
Alignment:
| Q |
82 |
acttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaac |
181 |
Q |
| |
|
||||| ||||||||||| |||||||| ||||||||||| |||| ||| | | ||| |||||| | |||| ||||||| |||||||| |||||| || |
|
|
| T |
16657934 |
actttgggaatcctagatgagccacccacaagaacaacgtcatcaatatcaccaatgtgcatctttgaatcacgaagacaattctcaacagttttcatac |
16657835 |
T |
|
| Q |
182 |
actcgttgaagagatccatattgatttcctcaaacttagcacg |
224 |
Q |
| |
|
|||| ||||| ||||||||||| |||||||||||||| ||||| |
|
|
| T |
16657834 |
actcattgaaaagatccatattaatttcctcaaacttggcacg |
16657792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 218
Target Start/End: Original strand, 7541904 - 7542113
Alignment:
| Q |
9 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
108 |
Q |
| |
|
|||||| ||||||||||| |||||| |||| ||||| ||||| || ||||| |||| ||||| || |||||| | |||||||| || || || || |
|
|
| T |
7541904 |
agcaacagcctcatcaggattaatgctcttgcacaagtcctttccattgaaaaagtcctttaatagctgatgtactatgggaatcctcgaagacccgccg |
7542003 |
T |
|
| Q |
109 |
acaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgattt |
208 |
Q |
| |
|
||||| |||||||||| ||| |||||||||||| || |||||| ||||||| || ||||||| ||| ||||||||| || ||||||||||| || | |
|
|
| T |
7542004 |
acaaggacaacatcatctatcatgctcttgtccatattagcatcaataagacagcttccaacaatcgtcatacactcgttaaaaagatccatattcatct |
7542103 |
T |
|
| Q |
209 |
cctcaaactt |
218 |
Q |
| |
|
|||||||||| |
|
|
| T |
7542104 |
cctcaaactt |
7542113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 225
Target Start/End: Complemental strand, 12259064 - 12258855
Alignment:
| Q |
16 |
gcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaa |
115 |
Q |
| |
|
||||||||||| |||||| |||| ||||| || ||||| ||||| ||||| ||||| || || ||||| |||||||||| || ||||| ||||| | |
|
|
| T |
12259064 |
gcctcatcaggattaatgctcttgcacaactctttccccttgaaaaaatcctgtaatagctgctgcactttgagaatcctagaagacccacctacaagga |
12258965 |
T |
|
| Q |
116 |
caacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgatttcctcaaa |
215 |
Q |
| |
|
||||||||| || | ||||||||| | || ||||| |||||||||||||||||| | |||| || || ||||| || |||| ||| ||||||||||| |
|
|
| T |
12258964 |
caacatcatctacattactcttgtccgtgttagcatccgtaagacaactctcaacagtcttcatgcattcattgaaaagttccaaatttatttcctcaaa |
12258865 |
T |
|
| Q |
216 |
cttagcacga |
225 |
Q |
| |
|
||| |||||| |
|
|
| T |
12258864 |
cttggcacga |
12258855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 168
Target Start/End: Original strand, 39373366 - 39373417
Alignment:
| Q |
117 |
aacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctca |
168 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| |||||||||||| |
|
|
| T |
39373366 |
aacatcatgtatagcaatcttgtccatcttggcatcagtgagacaactctca |
39373417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 227
Target Start/End: Original strand, 30774930 - 30775148
Alignment:
| Q |
9 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccc-tgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacc |
107 |
Q |
| |
|
|||||||||||||||||| || ||| |||| |||||||||||||| | || ||||| | ||||||||| || ||||| ||||||||||| || ||||| |
|
|
| T |
30774930 |
agcaactgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattac-gcaatagttcctgcactttgggaatcctagaagaaccacc |
30775028 |
T |
|
| Q |
108 |
aacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgatt |
207 |
Q |
| |
|
|||||||||| ||||| || | |||||||| | ||| | |||||||||||||||||||||| | | | |||||| || || || |||||||||||| |
|
|
| T |
30775029 |
gacaagaacaatatcatctacactactcttgtctacctttgaatcagtaagacaactctcaacagtctgtatacactcattaaaaaggtccatattgatt |
30775128 |
T |
|
| Q |
208 |
tcctcaaacttagcacgagt |
227 |
Q |
| |
|
||||||||||| ||||||| |
|
|
| T |
30775129 |
tcctcaaacttgacacgagt |
30775148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 35132141 - 35132293
Alignment:
| Q |
16 |
gcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaa |
115 |
Q |
| |
|
|||||||| ||||||||| |||| ||||| ||||||||| ||||| | |||||||| || || ||||| ||||||||||| || || |||||||||| |
|
|
| T |
35132141 |
gcctcatcggggttaatgctcttgcacaactccttccctttgaaaaagttttgcaatagctgctgcactttgggaatcctagaagaccctccaacaagaa |
35132240 |
T |
|
| Q |
116 |
caacatcatgta-tagcgctcttgtccatcttggcatcagtaagacaactctc |
167 |
Q |
| |
|
||||||||| || ||||||||||||||| |||||| | ||||||||||| |
|
|
| T |
35132241 |
caacatcatctacccttgctcttgtccatcttagcatcaatgagacaactctc |
35132293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 9336332 - 9336266
Alignment:
| Q |
58 |
aaaaattcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcat |
124 |
Q |
| |
|
|||||||| ||||||||| ||| ||||| ||||||||||| |||||||| |||||||||| ||||| |
|
|
| T |
9336332 |
aaaaattctagcaatagttcttgcactttcggaatcctagacgagccacccacaagaacaatatcat |
9336266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 23588165 - 23588107
Alignment:
| Q |
67 |
tgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatg |
125 |
Q |
| |
|
||||| |||||||| || || |||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
23588165 |
tgcaaaagttgttgaaccttgggaatcctagtggatccaccaacaagaacaacatcatg |
23588107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 23597075 - 23596960
Alignment:
| Q |
9 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
108 |
Q |
| |
|
|||||| |||||||||||||| ||| ||||||| | |||||||| || || || ||||| |||||||| || || |||||||||| || || ||| |
|
|
| T |
23597075 |
agcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatccgcca |
23596976 |
T |
|
| Q |
109 |
acaagaacaacatcat |
124 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
23596975 |
acaagaacaacatcat |
23596960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 54396156 - 54396217
Alignment:
| Q |
64 |
tcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatg |
125 |
Q |
| |
|
|||||||| || ||||| |||||||||||||| | || ||||||||||||||||| ||||| |
|
|
| T |
54396156 |
tcctgcaaaagctgttgaacttttggaatccttgttgatccaccaacaagaacaacttcatg |
54396217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 55; Significance: 9e-23; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 9 - 227
Target Start/End: Complemental strand, 4679047 - 4678829
Alignment:
| Q |
9 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
108 |
Q |
| |
|
|||||| |||||||| ||||| || |||| ||||||||||||| |||||| || |||||||| | || ||||| |||||||| || || ||||| |
|
|
| T |
4679047 |
agcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcctgcactttgggaatcctcgatgaaccaccc |
4678948 |
T |
|
| Q |
109 |
acaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgattt |
208 |
Q |
| |
|
|||||||||||||||| ||| ||| | |||||| | |||| |||||||||||| |||| ||| || |||||||||||| || |||||||| |||| |
|
|
| T |
4678947 |
acaagaacaacatcatcaatattactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaattt |
4678848 |
T |
|
| Q |
209 |
cctcaaacttagcacgagt |
227 |
Q |
| |
|
|||||||||| |||||||| |
|
|
| T |
4678847 |
cctcaaacttggcacgagt |
4678829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 227
Target Start/End: Original strand, 15594712 - 15594930
Alignment:
| Q |
9 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
108 |
Q |
| |
|
|||||| |||||||||||||| ||| || | ||||| ||||| || | ||||| |||| |||||||||||| ||||| ||||||||||| || |||||| |
|
|
| T |
15594712 |
agcaacagcctcatcagggttgatgctcatgcacaattcctttccctcgaaaaaatccttcaatagttgttgcactttgggaatcctagaagacccacca |
15594811 |
T |
|
| Q |
109 |
acaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgattt |
208 |
Q |
| |
|
|||| |||| ||||| || | ||||| | |||||| |||||| ||||||||||||||| || |||| ||| || || || | ||||| ||||||| |
|
|
| T |
15594812 |
acaatgacaatatcatttacactactcttattcatcttagcatcatcaagacaactctcaactatcttcatacaatccttaaaaaagtccatgttgattt |
15594911 |
T |
|
| Q |
209 |
cctcaaacttagcacgagt |
227 |
Q |
| |
|
| |||||||| | |||||| |
|
|
| T |
15594912 |
cttcaaacttggaacgagt |
15594930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 227
Target Start/End: Complemental strand, 34467229 - 34467057
Alignment:
| Q |
58 |
aaaaattcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaa |
157 |
Q |
| |
|
||||| ||| ||||||| || || ||||| ||||||||||| ||||| || ||||| ||| ||||||| | | ||| |||||||||| |||||| || |
|
|
| T |
34467229 |
aaaaagtcccgcaatagctgctgcactttgggaatcctagaagagcccccgacaaggacagcatcatgcacactactcgtgtccatcttagcatcaacaa |
34467130 |
T |
|
| Q |
158 |
gacaactctcaacaattttca---aacactcgttgaagagatccatattgatttcctcaaacttagcacgagt |
227 |
Q |
| |
|
|||||||| ||||||| ||| | | || || |||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
34467129 |
gacaactcacaacaatcctcatgcattaatctttaaagaagtccatattgatttcctcaaacttggcacgagt |
34467057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 52549353 - 52549293
Alignment:
| Q |
158 |
gacaactctcaacaattttcaaacactcgttgaagagatccatattgatttcctcaaactt |
218 |
Q |
| |
|
||||||| |||||||| |||| |||||| || || || |||||||| |||||||||||||| |
|
|
| T |
52549353 |
gacaactttcaacaatcttcatacactccttaaaaaggtccatattcatttcctcaaactt |
52549293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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