View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2673_low_23 (Length: 336)

Name: NF2673_low_23
Description: NF2673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2673_low_23
NF2673_low_23
[»] chr8 (13 HSPs)
chr8 (1-154)||(17683697-17683850)
chr8 (1-154)||(17664541-17664694)
chr8 (1-135)||(39837482-39837616)
chr8 (1-125)||(17973576-17973700)
chr8 (1-124)||(4839713-4839836)
chr8 (1-125)||(25579742-25579866)
chr8 (1-135)||(30938293-30938427)
chr8 (1-119)||(39845541-39845659)
chr8 (1-135)||(1406993-1407127)
chr8 (1-118)||(26873541-26873658)
chr8 (1-118)||(26875991-26876108)
chr8 (251-302)||(17664393-17664444)
chr8 (251-302)||(17683549-17683600)
[»] chr2 (21 HSPs)
chr2 (1-154)||(20372214-20372367)
chr2 (1-154)||(20621529-20621682)
chr2 (1-135)||(14582936-14583070)
chr2 (1-135)||(15944477-15944611)
chr2 (1-135)||(15952992-15953126)
chr2 (1-135)||(35138604-35138738)
chr2 (1-135)||(35146940-35147074)
chr2 (1-135)||(38168277-38168411)
chr2 (1-135)||(41233764-41233898)
chr2 (1-135)||(42565849-42565983)
chr2 (1-135)||(42574473-42574607)
chr2 (18-135)||(35037884-35038001)
chr2 (1-99)||(44372716-44372814)
chr2 (1-99)||(44388627-44388725)
chr2 (1-84)||(17687369-17687452)
chr2 (1-101)||(25483612-25483712)
chr2 (1-101)||(25491218-25491318)
chr2 (251-302)||(20621788-20621839)
chr2 (33-115)||(35303780-35303862)
chr2 (1-84)||(27606616-27606698)
chr2 (39-116)||(18989312-18989389)
[»] chr5 (19 HSPs)
chr5 (1-136)||(29186197-29186332)
chr5 (1-125)||(20372843-20372967)
chr5 (1-125)||(20398565-20398689)
chr5 (1-135)||(1728079-1728213)
chr5 (1-135)||(24956766-24956900)
chr5 (1-135)||(24965229-24965363)
chr5 (1-135)||(43597966-43598100)
chr5 (1-135)||(43603458-43603592)
chr5 (1-135)||(43608950-43609084)
chr5 (1-125)||(23350006-23350130)
chr5 (1-135)||(28843951-28844085)
chr5 (1-135)||(28852561-28852695)
chr5 (1-117)||(31421800-31421916)
chr5 (1-122)||(31410901-31411022)
chr5 (1-101)||(19223566-19223666)
chr5 (76-115)||(17638325-17638364)
chr5 (256-302)||(19223811-19223857)
chr5 (69-115)||(23028007-23028053)
chr5 (68-114)||(23037923-23037969)
[»] scaffold0156 (1 HSPs)
scaffold0156 (1-125)||(35286-35410)
[»] chr7 (13 HSPs)
chr7 (1-135)||(10439948-10440082)
chr7 (1-135)||(13831511-13831645)
chr7 (1-135)||(13839542-13839676)
chr7 (1-135)||(18304312-18304446)
chr7 (1-135)||(4952317-4952451)
chr7 (1-135)||(12978466-12978600)
chr7 (1-115)||(21662962-21663077)
chr7 (1-84)||(30244786-30244869)
chr7 (1-51)||(4941581-4941631)
chr7 (1-84)||(30255423-30255506)
chr7 (4-84)||(30245582-30245662)
chr7 (61-116)||(1955691-1955746)
chr7 (69-115)||(16242317-16242363)
[»] chr4 (12 HSPs)
chr4 (1-135)||(27343611-27343745)
chr4 (1-135)||(4523600-4523734)
chr4 (1-135)||(12996487-12996621)
chr4 (1-125)||(8094212-8094336)
chr4 (1-125)||(8103018-8103142)
chr4 (1-136)||(21532224-21532358)
chr4 (1-118)||(52295615-52295732)
chr4 (1-115)||(12428418-12428532)
chr4 (33-116)||(33188808-33188891)
chr4 (1-63)||(10638339-10638400)
chr4 (90-135)||(10638406-10638451)
chr4 (45-84)||(12402907-12402946)
[»] chr6 (15 HSPs)
chr6 (1-119)||(15391547-15391665)
chr6 (4-125)||(33298099-33298219)
chr6 (1-135)||(5004072-5004206)
chr6 (1-125)||(13825714-13825838)
chr6 (1-125)||(30824459-30824583)
chr6 (1-135)||(35091596-35091730)
chr6 (1-125)||(25550306-25550430)
chr6 (1-135)||(11279848-11279982)
chr6 (1-135)||(25991861-25991995)
chr6 (1-118)||(5994710-5994827)
chr6 (1-135)||(25506461-25506595)
chr6 (1-135)||(23925346-23925481)
chr6 (49-126)||(26526631-26526708)
chr6 (1-42)||(5489132-5489173)
chr6 (1-66)||(13490204-13490269)
[»] chr3 (20 HSPs)
chr3 (1-135)||(8154564-8154698)
chr3 (1-135)||(50824363-50824497)
chr3 (1-135)||(50851363-50851497)
chr3 (1-135)||(41006567-41006701)
chr3 (1-135)||(41015347-41015481)
chr3 (1-125)||(14538534-14538659)
chr3 (1-135)||(2211250-2211384)
chr3 (1-135)||(27341254-27341389)
chr3 (1-136)||(28470137-28470271)
chr3 (1-125)||(9525364-9525488)
chr3 (1-125)||(9555038-9555162)
chr3 (1-115)||(17933666-17933780)
chr3 (33-116)||(43470492-43470575)
chr3 (1-115)||(16816145-16816258)
chr3 (1-115)||(17919210-17919324)
chr3 (1-54)||(17628276-17628329)
chr3 (1-84)||(18349567-18349650)
chr3 (1-84)||(21186758-21186841)
chr3 (76-116)||(16288693-16288733)
chr3 (76-116)||(31276600-31276640)
[»] chr1 (12 HSPs)
chr1 (1-135)||(3432810-3432944)
chr1 (1-125)||(32137684-32137808)
chr1 (1-135)||(31539965-31540099)
chr1 (1-135)||(31548534-31548668)
chr1 (1-135)||(35103984-35104118)
chr1 (1-125)||(41746622-41746747)
chr1 (1-115)||(29221429-29221542)
chr1 (1-115)||(44320132-44320246)
chr1 (63-115)||(28457629-28457681)
chr1 (32-114)||(51058330-51058411)
chr1 (62-115)||(8241438-8241491)
chr1 (69-113)||(13462775-13462819)
[»] scaffold0111 (1 HSPs)
scaffold0111 (1-135)||(33046-33180)
[»] scaffold0209 (1 HSPs)
scaffold0209 (1-135)||(4-138)
[»] scaffold0083 (1 HSPs)
scaffold0083 (1-118)||(15824-15941)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-125)||(121239-121363)
[»] scaffold0497 (1 HSPs)
scaffold0497 (1-116)||(11004-11119)
[»] scaffold0632 (1 HSPs)
scaffold0632 (1-118)||(4401-4518)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-125)||(23475-23600)
[»] scaffold0173 (1 HSPs)
scaffold0173 (1-125)||(859-983)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-101)||(40787-40887)
[»] scaffold0431 (1 HSPs)
scaffold0431 (1-115)||(150-264)
[»] scaffold0170 (1 HSPs)
scaffold0170 (1-116)||(7129-7244)
[»] scaffold0222 (1 HSPs)
scaffold0222 (32-115)||(20422-20505)
[»] scaffold0027 (2 HSPs)
scaffold0027 (58-136)||(65622-65701)
scaffold0027 (262-302)||(65470-65510)
[»] scaffold0315 (1 HSPs)
scaffold0315 (60-116)||(10595-10651)
[»] scaffold0290 (1 HSPs)
scaffold0290 (39-116)||(15760-15837)
[»] scaffold0048 (1 HSPs)
scaffold0048 (90-123)||(7587-7620)
[»] scaffold0007 (1 HSPs)
scaffold0007 (78-116)||(61380-61418)
[»] scaffold1380 (1 HSPs)
scaffold1380 (76-116)||(557-597)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-85)||(192539-192623)


Alignment Details
Target: chr8 (Bit Score: 122; Significance: 1e-62; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 17683850 - 17683697
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||  ||||||| |||||||    
T  17683850 aaattttgaccacttttctctatccttgcccattttattcgtatttttagagtcgggaattttcgtcgtttcagacgaaattttgacaaagaagttactt 17683751  T
Q  101 tgaagtacctcattttttattccgaatcagacccttctctttcccattattttc 154  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  17683750 tgaagtacctcattttttattccgagtcggacccttctctttcccattattttc 17683697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 17664694 - 17664541
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||| ||||||||  ||||||| |||||||    
T  17664694 aaattttgaccacttttctctatccttgcccattttattcgtatttttagagtcgggaattttcatcgtttcagacgaaattttgacaaagaagttactt 17664595  T
Q  101 tgaagtacctcattttttattccgaatcagacccttctctttcccattattttc 154  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  17664594 tgaagtacctcattttttattccgagtcggacccttctctttcccattattttc 17664541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 39837616 - 39837482
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||| |||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||    
T  39837616 aaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaaagaggttactt 39837517  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||||||||||| || ||||||    
T  39837516 tgaagtacctcattttttattccgagtcggaccct 39837482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 17973576 - 17973700
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||  || |||||||||||    
T  17973576 aaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcagagaggttactt 17973675  T
Q  101 tgaagtacctcattttttattccga 125  Q
    |||||||||||||||||||||||||    
T  17973676 tgaagtacctcattttttattccga 17973700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 4839836 - 4839713
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||    
T  4839836 aaattttgaccgcttttctctattcttacctattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacaaagaagttactt 4839737  T
Q  101 tgaagtacctcattttttattccg 124  Q
    ||||||||||||||||| ||||||    
T  4839736 tgaagtacctcatttttgattccg 4839713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 25579866 - 25579742
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||| ||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||    
T  25579866 aaattttgaccacttttatctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaagaggttactt 25579767  T
Q  101 tgaagtacctcattttttattccga 125  Q
    |||||||||||||||||||||||||    
T  25579766 tgaagtacctcattttttattccga 25579742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 30938293 - 30938427
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||| ||||||||||    
T  30938293 aaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactt 30938392  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||| ||||||| || ||||||    
T  30938393 tgaagtacctcatttttgattccgagtcggaccct 30938427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 39845659 - 39845541
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||| |||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||    
T  39845659 aaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaaagaggttactt 39845560  T
Q  101 tgaagtacctcatttttta 119  Q
    |||||||||||||||||||    
T  39845559 tgaagtacctcatttttta 39845541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 1407127 - 1406993
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||| |||||| ||| || |||||||||||||||||||||| | ||||||||| |||||||| ||||||||   ||||||||||||||    
T  1407127 aaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgtgaattttcgccgtttcagacgaaattttggcaaagaggttactt 1407028  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||||||||||| || ||||||    
T  1407027 tgaagtacctcattttttattccgagtcggaccct 1406993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 26873658 - 26873541
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||| ||| ||||| ||||||||||||||||| ||||||||| |||||||||||||||    
T  26873658 aaattttgaccacttttctctattcttacccattttattcgtatttgtaatgtcggaaattttcgtcgtttcagacgaaatttcgacaaagaggttactt 26873559  T
Q  101 tgaagtacctcatttttt 118  Q
    | |||||||| |||||||    
T  26873558 taaagtaccttatttttt 26873541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 26876108 - 26875991
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||| ||||| |||||| |||||||||| ||||||||| |||||||||||||||    
T  26876108 aaattttgaccacttttctctattcttacccattttattcgtatttttaatgtcggaaatttttgtcgtttcagacgaaatttcgacaaagaggttactt 26876009  T
Q  101 tgaagtacctcatttttt 118  Q
    | || |||||||||||||    
T  26876008 taaaatacctcatttttt 26875991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 302
Target Start/End: Complemental strand, 17664444 - 17664393
Alignment:
Q  251 ctgtacaatgttgtcaataagtccgaaggttttcggcagtggtccaaatttc 302  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17664444 ctgtacaatgttgtcaataagtccgaaggttttctgcagtggtccaaatttc 17664393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 302
Target Start/End: Complemental strand, 17683600 - 17683549
Alignment:
Q  251 ctgtacaatgttgtcaataagtccgaaggttttcggcagtggtccaaatttc 302  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17683600 ctgtacaatgttgtcaataagtccgaaggttttctgcagtggtccaaatttc 17683549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 20372367 - 20372214
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||| |||||||||    
T  20372367 aaattttgaccacttttctctatccttgcccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcgacaaa-aggttactt 20372269  T
Q  101 tgaagtacctca-ttttttattccgaatcagacccttctctttcccattattttc 154  Q
    |||||||||||| ||||||||||||| || |||||||||||||||||||||||||    
T  20372268 tgaagtacctcatttttttattccgagtcggacccttctctttcccattattttc 20372214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 20621529 - 20621682
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||| ||||| ||||||||||||||||||||||||| | ||||||| ||||||| |||||||    
T  20621529 aaattttgaccacttttctctattcttacccattttattcgtgtttttgaagtcgggaattttcgtcgtttcagacaaaatttcgacaaagatgttactt 20621628  T
Q  101 tgaagtacctcattttttattccgaatcagacccttctctttcccattattttc 154  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  20621629 tgaagtacctcattttttattctgagtcagacccttctctttcccattattttc 20621682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 14582936 - 14583070
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||| ||||||||||    
T  14582936 aaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactt 14583035  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||| ||||||| || ||||||    
T  14583036 tgaagtacctcatttttgattccgagtcggaccct 14583070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 15944611 - 15944477
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||| ||||||||||    
T  15944611 aaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactt 15944512  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||| ||||||| || ||||||    
T  15944511 tgaagtacctcatttttgattccgagtcggaccct 15944477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 15953126 - 15952992
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||| ||||||||||    
T  15953126 aaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactt 15953027  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||| ||||||| || ||||||    
T  15953026 tgaagtacctcatttttgattccgagtcggaccct 15952992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 35138604 - 35138738
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||| ||||||||||    
T  35138604 aaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactt 35138703  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||| ||||||| || ||||||    
T  35138704 tgaagtacctcatttttgattccgagtcggaccct 35138738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 35146940 - 35147074
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||| ||||||||||    
T  35146940 aaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactt 35147039  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||| ||||||| || ||||||    
T  35147040 tgaagtacctcatttttgattccgagtcggaccct 35147074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 38168411 - 38168277
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||| ||||||||||    
T  38168411 aaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactt 38168312  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||| ||||||| || ||||||    
T  38168311 tgaagtacctcatttttgattccgagtcggaccct 38168277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 41233898 - 41233764
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||| ||||||||||    
T  41233898 aaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactt 41233799  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||| ||||||| || ||||||    
T  41233798 tgaagtacctcatttttgattccgagtcggaccct 41233764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 42565983 - 42565849
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||| |||||| ||| || |||||||||||||||||||||| | ||||||||| |||||||| ||||||||   ||||||||||||||    
T  42565983 aaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaaagaggttactt 42565884  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||||||||||| || ||||||    
T  42565883 tgaagtacctcattttttattccgagtcggaccct 42565849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 42574607 - 42574473
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||| |||||| ||| || |||||||||||||||||||||| | ||||||||| |||||||| ||||||||   ||||||||||||||    
T  42574607 aaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaaagaggttactt 42574508  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||||||||||| || ||||||    
T  42574507 tgaagtacctcattttttattccgagtcggaccct 42574473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 35037884 - 35038001
Alignment:
Q  18 ctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactttgaagtacctcattttt 117  Q
    |||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||| | | ||||||||||||||| ||||||||||||    
T  35037884 ctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgatagagaggttactttgaaatacctcattttt 35037983  T
Q  118 tattccgaatcagaccct 135  Q
    |||||||| |||| ||||    
T  35037984 tattccgagtcaggccct 35038001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 44372716 - 44372814
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttact 99  Q
    ||||||||||||||||| |||||| || || |||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||    
T  44372716 aaattttgaccacttttttctatctttacccattttattcgtatttttaaagtcgggaattttcgtcgtttaagacgaaatttcgacaaagaggttact 44372814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 44388627 - 44388725
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttact 99  Q
    ||||||||||||||||| |||||| || || |||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||    
T  44388627 aaattttgaccacttttttctatctttacccattttattcgtatttttaaagtcgggaattttcgtcgtttaagacgaaatttcgacaaagaggttact 44388725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 17687452 - 17687369
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttc 84  Q
    ||||||||||||||||||||||| ||| || ||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  17687452 aaattttgaccacttttctctattcttacccattttattcatatttttaaagtcgggaattttcgtcgtttcagacgaaatttc 17687369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 25483612 - 25483712
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| |||  | |||||||| ||||||||||||||| |||||||||||||||||| |||||| || ||| |||||||||||    
T  25483612 aaattttgaccacttttctctattcttatccattttatttgtatttttaaagtcgagaattttcgtcgtttcagacgaaatctcgacagagaggttactt 25483711  T
Q  101 t 101  Q
    |    
T  25483712 t 25483712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 25491218 - 25491318
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| |||  | |||||||| ||||||||||||||| |||||||||||||||||| |||||| || ||| |||||||||||    
T  25491218 aaattttgaccacttttctctattcttatccattttatttgtatttttaaagtcgagaattttcgtcgtttcagacgaaatctcgacagagaggttactt 25491317  T
Q  101 t 101  Q
    |    
T  25491318 t 25491318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 251 - 302
Target Start/End: Original strand, 20621788 - 20621839
Alignment:
Q  251 ctgtacaatgttgtcaataagtccgaaggttttcggcagtggtccaaatttc 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20621788 ctgtacaatgttgtcaataagtccgaaggttttcggcagtggtccaaatttc 20621839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 33 - 115
Target Start/End: Original strand, 35303780 - 35303862
Alignment:
Q  33 ttttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactttgaagtacctcattt 115  Q
    |||||||| |||||| |||| |  ||| |||||||||||||| |||||||||  || |||||||| |||||||||||||||||    
T  35303780 ttttattcttattttaaaagccaagaaatttcgtcgtttcagacgaaatttcggcagagaggttaatttgaagtacctcattt 35303862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 27606698 - 27606616
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttc 84  Q
    |||||||||| ||||||||||||  ||  | |||||||||||| |||||||| |||||||||| ||||| |||| |||||||||    
T  27606698 aaattttgactacttttctctatttttatcaattttattcgtacttttaaagacgggaatttt-gtcgtctcagacgaaatttc 27606616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 116
Target Start/End: Complemental strand, 18989389 - 18989312
Alignment:
Q  39 tcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactttgaagtacctcatttt 116  Q
    |||| ||||||||| |||||||||| ||||  |||| ||||||| |   | |||||||||||| ||||||||||||||    
T  18989389 tcgtctttttaaagccgggaatttttgtcgcatcagacgaaattacggtagagaggttactttcaagtacctcatttt 18989312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 3e-54; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 29186332 - 29186197
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  29186332 aaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacaaagaggttactt 29186233  T
Q  101 tgaagtacctcattttttattccgaatcagaccctt 136  Q
    |||||| |||||||||||||||||| || |||||||    
T  29186232 tgaagtgcctcattttttattccgagtcggaccctt 29186197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 20372967 - 20372843
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||    
T  20372967 aaattttgaccacttttctctattcttaccgattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacagagaggttactt 20372868  T
Q  101 tgaagtacctcattttttattccga 125  Q
    |||||||||||||||||||||||||    
T  20372867 tgaagtacctcattttttattccga 20372843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 20398689 - 20398565
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||    
T  20398689 aaattttgaccacttttctctattcttaccgattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacagagaggttactt 20398590  T
Q  101 tgaagtacctcattttttattccga 125  Q
    |||||||||||||||||||||||||    
T  20398589 tgaagtacctcattttttattccga 20398565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 1728213 - 1728079
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||| |||||| ||| || |||||||||||||||||||||||||||||||||| |||||||| ||||||||  |||||||||||||||    
T  1728213 aaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttgacaaagaggttactt 1728114  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||||||||||| || ||||||    
T  1728113 tgaagtacctcattttttattccgagtcggaccct 1728079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 24956900 - 24956766
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||| ||||||||||    
T  24956900 aaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactt 24956801  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||| ||||||| || ||||||    
T  24956800 tgaagtacctcatttttgattccgagtcggaccct 24956766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 24965363 - 24965229
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||| ||||||||||    
T  24965363 aaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactt 24965264  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||| ||||||| || ||||||    
T  24965263 tgaagtacctcatttttgattccgagtcggaccct 24965229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 43598100 - 43597966
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||| |||||| ||| || |||||||||||||||||||||||||||||||||| |||||||| ||||||||   ||||||||||||||    
T  43598100 aaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttggcaaagaggttactt 43598001  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||||||||||| || ||||||    
T  43598000 tgaagtacctcattttttattccgagtcggaccct 43597966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 43603592 - 43603458
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||| |||||| ||| || |||||||||||||||||||||||||||||||||| |||||||| ||||||||   ||||||||||||||    
T  43603592 aaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttggcaaagaggttactt 43603493  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||||||||||| || ||||||    
T  43603492 tgaagtacctcattttttattccgagtcggaccct 43603458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 43609084 - 43608950
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||| |||||| ||| || |||||||||||||||||||||||||||||||||| |||||||| ||||||||   ||||||||||||||    
T  43609084 aaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttggcaaagaggttactt 43608985  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||||||||||| || ||||||    
T  43608984 tgaagtacctcattttttattccgagtcggaccct 43608950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 23350130 - 23350006
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||| ||||||||||  || || |||||||||||||||||||||||||||||| ||||| |||||| |||||||||  ||||||||||||||    
T  23350130 aaattttgaccatttttctctatttttacccattttattcgtatttttaaagtcgggaattctcgtcatttcagacgaaatttcggcaaagaggttactt 23350031  T
Q  101 tgaagtacctcattttttattccga 125  Q
    |||||||||||||||||||||||||    
T  23350030 tgaagtacctcattttttattccga 23350006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 28843951 - 28844085
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||| |||||| ||| || |||||||||||||||||||||| | ||||||||| |||||||| ||||||||   ||||||||||||||    
T  28843951 aaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaaagaggttactt 28844050  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||||||||||| || ||||||    
T  28844051 tgaagtacctcattttttattccgagtcggaccct 28844085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 28852561 - 28852695
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||| |||||| ||| || |||||||||||||||||||||| | ||||||||| |||||||| ||||||||   ||||||||||||||    
T  28852561 aaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaaagaggttactt 28852660  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||||||||||| || ||||||    
T  28852661 tgaagtacctcattttttattccgagtcggaccct 28852695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 31421800 - 31421916
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||| ||||||| ||||||||||||||||| | ||||||| ||||||| |||||||    
T  31421800 aaattttgaccacttttctctattcttacccattttattcgtatttttgaagtcggaaattttcgtcgtttcagacaaaatttcgacaaagatgttactt 31421899  T
Q  101 tgaagtacctcattttt 117  Q
    |||||||||||||||||    
T  31421900 tgaagtacctcattttt 31421916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 31410901 - 31411022
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||| ||||||||| ||  || ||||||||||||||||||||||  |||||||||||||||| |  ||||||||| |||||||||||||||    
T  31410901 aaattttgaccacatttctctattctaacccattttattcgtatttttaaagttaggaattttcgtcgtttaaaacgaaatttcgacaaagaggttactt 31411000  T
Q  101 tgaagtacctcattttttattc 122  Q
    ||||||||||||||||||||||    
T  31411001 tgaagtacctcattttttattc 31411022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 19223566 - 19223666
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| |||  | |||||||| ||||||||||||||| ||||| ||||||||||||  ||||| || ||| |||||||||||    
T  19223566 aaattttgaccacttttctctattcttatccattttatttgtatttttaaagtcgagaattgtcgtcgtttcagatgaaatctcgacagagaggttactt 19223665  T
Q  101 t 101  Q
    |    
T  19223666 t 19223666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 17638325 - 17638364
Alignment:
Q  76 cgaaatttcaacaaagaggttactttgaagtacctcattt 115  Q
    ||||||||| ||| ||||||||||||||||||||||||||    
T  17638325 cgaaatttcgacagagaggttactttgaagtacctcattt 17638364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 19223811 - 19223857
Alignment:
Q  256 caatgttgtcaataagtccgaaggttttcggcagtggtccaaatttc 302  Q
    |||||||||||||||||||||| |||||| |||  ||||||||||||    
T  19223811 caatgttgtcaataagtccgaaagttttcagcaagggtccaaatttc 19223857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 115
Target Start/End: Complemental strand, 23028053 - 23028007
Alignment:
Q  69 tttcaggcgaaatttcaacaaagaggttactttgaagtacctcattt 115  Q
    |||||| |||||||||  || ||||||||||||||||||||||||||    
T  23028053 tttcagacgaaatttcggcagagaggttactttgaagtacctcattt 23028007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 114
Target Start/End: Original strand, 23037923 - 23037969
Alignment:
Q  68 gtttcaggcgaaatttcaacaaagaggttactttgaagtacctcatt 114  Q
    ||||||| |||||||||  || |||||||||||||||||||||||||    
T  23037923 gtttcagacgaaatttcggcagagaggttactttgaagtacctcatt 23037969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 35410 - 35286
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  35410 aaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacaaagaggttactt 35311  T
Q  101 tgaagtacctcattttttattccga 125  Q
    |||||||||||||||||||||||||    
T  35310 tgaagtacctcattttttattccga 35286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 3e-51; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 10439948 - 10440082
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||  || |||||||||||    
T  10439948 aaattttgaccacttttctctattcttgcccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcagagaggttactt 10440047  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    | ||||||||||||||||||||||| |||||||||    
T  10440048 taaagtacctcattttttattccgagtcagaccct 10440082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 13831511 - 13831645
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||| |||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||    
T  13831511 aaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaaagaggttactt 13831610  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||||||||||| || ||||||    
T  13831611 tgaagtacctcattttttattccgagtcggaccct 13831645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 13839542 - 13839676
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||| |||||| |||  | ||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||    
T  13839542 aaattttgaccactttcctctattcttatccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaaagaggttactt 13839641  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||||||||||| || ||||||    
T  13839642 tgaagtacctcattttttattccgagtcggaccct 13839676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 18304446 - 18304312
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||    
T  18304446 aaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaagaggttactt 18304347  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||||||| ||| || ||||||    
T  18304346 tgaagtacctcattttttatttcgagtcggaccct 18304312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 4952451 - 4952317
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||| ||||| ||| || ||||||||||||||||||||||||| ||||||||||||||||| ||||||||   ||||||||||||||    
T  4952451 aaattttgaccacttttatctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaattttggcaaagaggttactt 4952352  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||||||||||| || ||||||    
T  4952351 tgaagtacctcattttttattccgagtcggaccct 4952317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 12978466 - 12978600
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||| ||||||||||    
T  12978466 aaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactt 12978565  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||| ||||||| || ||||||    
T  12978566 tgaagtacctcatttttgattccgagtcggaccct 12978600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 21663077 - 21662962
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtattttt-aaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttact 99  Q
    ||||||||| ||||||| ||| |  || || ||||||||||||||||| |||| || || | |||||||||| || |||||||||||||  |||||||||    
T  21663077 aaattttgatcacttttatctgtttttacccattttattcgtattttttaaagccgagagtcttcgtcgttttagacgaaatttcaacagggaggttact 21662978  T
Q  100 ttgaagtacctcattt 115  Q
    ||||||||||||||||    
T  21662977 ttgaagtacctcattt 21662962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 30244786 - 30244869
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttc 84  Q
    |||||||||||||||||||||||  ||  | ||||||||||||||||||||||| ||||||||||| ||||||| || ||||||    
T  30244786 aaattttgaccacttttctctatttttatccattttattcgtatttttaaagtcaggaattttcgttgtttcagtcgtaatttc 30244869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4941631 - 4941581
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaa 51  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||    
T  4941631 aaattttgaccacttttctctattcttacccattttattcgtatttttaaa 4941581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 30255423 - 30255506
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttc 84  Q
    |||||||||||||||||||||||  ||  | ||||||||||||||||| | ||| | ||||||||| ||||||| || ||||||    
T  30255423 aaattttgaccacttttctctatttttatccattttattcgtatttttcatgtcagaaattttcgttgtttcagtcgtaatttc 30255506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 30245582 - 30245662
Alignment:
Q  4 ttttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttc 84  Q
    ||||||||||||||||||||  ||  | ||||||||||||||||| | ||| | ||||||||| ||||||| || ||||||    
T  30245582 ttttgaccacttttctctatttttatccattttattcgtatttttcatgtcagaaattttcgttgtttcagtcgtaatttc 30245662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 1955746 - 1955691
Alignment:
Q  61 tttcgtcgtttcaggcgaaatttcaacaaagaggttactttgaagtacctcatttt 116  Q
    |||||||||||||| | |||||||  || |||||||||||||||| ||||||||||    
T  1955746 tttcgtcgtttcagacaaaatttcggcagagaggttactttgaagcacctcatttt 1955691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 115
Target Start/End: Original strand, 16242317 - 16242363
Alignment:
Q  69 tttcaggcgaaatttcaacaaagaggttactttgaagtacctcattt 115  Q
    |||||||| ||||||| ||| |||| |||||||||||||||||||||    
T  16242317 tttcaggcaaaatttcgacagagagattactttgaagtacctcattt 16242363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 3e-51; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 27343745 - 27343611
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||||||||||  || || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  27343745 aaattttgaccacttttctctatttttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacagagaggttactt 27343646  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||||||||||| || ||||||    
T  27343645 tgaagtacctcattttttattccgagtcggaccct 27343611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 4523734 - 4523600
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||| |||||| |||  | ||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||    
T  4523734 aaattttgaccactttcctctattcttatccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaaagaggttactt 4523635  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||||||||||| || ||||||    
T  4523634 tgaagtacctcattttttattccgagtcggaccct 4523600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 12996487 - 12996621
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||||||||| |||||||||   | |||||||||||    
T  12996487 aaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggtagagaggttactt 12996586  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||||||||||| |||| ||||    
T  12996587 tgaagtacctcattttttattccgagtcagtccct 12996621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 8094336 - 8094212
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || |||||||| |||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||    
T  8094336 aaattttgaccacttttctctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaagaggttactt 8094237  T
Q  101 tgaagtacctcattttttattccga 125  Q
    ||||||||||||||||| |||||||    
T  8094236 tgaagtacctcatttttgattccga 8094212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 8103142 - 8103018
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || |||||||| |||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||    
T  8103142 aaattttgaccacttttctctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaagaggttactt 8103043  T
Q  101 tgaagtacctcattttttattccga 125  Q
    ||||||||||||||||| |||||||    
T  8103042 tgaagtacctcatttttgattccga 8103018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 21532358 - 21532224
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||||||||||||||  | ||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||| || ||||||    
T  21532358 aaattttgaccacttttctctatccttatccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcgacaaa-agattactt 21532260  T
Q  101 tgaagtacctcattttttattccgaatcagaccctt 136  Q
    |||||||||||||||||||||| || || |||||||    
T  21532259 tgaagtacctcattttttattctgagtcggaccctt 21532224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 52295615 - 52295732
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| | |||||||  || |||| ||||||    
T  52295615 aaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacaaaatttcggcagagagattactt 52295714  T
Q  101 tgaagtacctcatttttt 118  Q
    ||||||||||||||||||    
T  52295715 tgaagtacctcatttttt 52295732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 12428532 - 12428418
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||||||||||   | || ||||||||||||||||||||| | | |||||||||  |||||| ||||||||| || ||||| ||||||    
T  12428532 aaattttgaccacttttctctatttctacccattttattcgtatttttaaagccagaaattttcgttatttcagacgaaatttcgacgaagagtttactt 12428433  T
Q  101 tgaagtacctcattt 115  Q
    |||||||||||||||    
T  12428432 tgaagtacctcattt 12428418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 33188808 - 33188891
Alignment:
Q  33 ttttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactttgaagtacctcatttt 116  Q
    ||||||| ||||||||||||  | |||||||||||||||||| |||||||||| |||  ||||||||||||| |||||||||||    
T  33188808 ttttatttgtatttttaaagctgagaattttcgtcgtttcagacgaaatttcagcaagaaggttactttgaattacctcatttt 33188891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 10638339 - 10638400
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaatttt 63  Q
    |||||||||||||||||||||||  || || |||||||||||| |||||||||||||||||||    
T  10638339 aaattttgaccacttttctctatttttacccattttattcgta-ttttaaagtcgggaatttt 10638400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 10638406 - 10638451
Alignment:
Q  90 agaggttactttgaagtacctcattttttattccgaatcagaccct 135  Q
    |||||||||||||||||||||||||||||||||||| || ||||||    
T  10638406 agaggttactttgaagtacctcattttttattccgagtcggaccct 10638451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 12402907 - 12402946
Alignment:
Q  45 ttttaaagtcgggaattttcgtcgtttcaggcgaaatttc 84  Q
    |||||||||| ||||||||||||||||||| |||||||||    
T  12402907 ttttaaagtcaggaattttcgtcgtttcagacgaaatttc 12402946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 99; Significance: 8e-49; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 15391665 - 15391547
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||| ||||||||| |||||||||||||||    
T  15391665 aaattttgaccacttttctctatccttgcccattttattcgtatttttaaagccaggaattttcgtcgtttcagacgaaatttcgacaaagaggttactt 15391566  T
Q  101 tgaagtacctcatttttta 119  Q
    |||||||||||||||||||    
T  15391565 tgaagtacctcatttttta 15391547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 33298099 - 33298219
Alignment:
Q  4 ttttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactttga 103  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  33298099 ttttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacaaaga-gttactttga 33298197  T
Q  104 agtacctcattttttattccga 125  Q
    ||||||||||||||||||||||    
T  33298198 agtacctcattttttattccga 33298219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 5004072 - 5004206
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||| ||||||||||    
T  5004072 aaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactt 5004171  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||| ||||||| || ||||||    
T  5004172 tgaagtacctcatttttgattccgagtcggaccct 5004206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 13825714 - 13825838
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||| ||||||||||||| ||| || ||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| |||||||||||    
T  13825714 aaattttgatcacttttctctattcttacccattttattcgtatttttaaagtcaggaattttcgtcgtttcagacgaaatttcgacagagaggttactt 13825813  T
Q  101 tgaagtacctcattttttattccga 125  Q
    ||||||||||||||||| |||||||    
T  13825814 tgaagtacctcatttttgattccga 13825838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 30824583 - 30824459
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || |||||||| |||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||    
T  30824583 aaattttgaccacttttctctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaagaggttactt 30824484  T
Q  101 tgaagtacctcattttttattccga 125  Q
    ||||||||||||||||| |||||||    
T  30824483 tgaagtacctcatttttgattccga 30824459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 35091730 - 35091596
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||| ||||||||||||||| ||||||||||||||||| ||||||||   ||| ||||||||||    
T  35091730 aaattttgaccacttttctctattcttacccattttattcatatttttaaagtcggaaattttcgtcgtttcagacgaaattttggcaaggaggttactt 35091631  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||||||| |||||| ||||||    
T  35091630 tgaagtacctcattttttatttcgaatcggaccct 35091596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 25550306 - 25550430
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||| ||||||||||||||||||||||||||||||||  ||||||||   || |||||||||||    
T  25550306 aaattttgaccacttttctctattcttacccattttattcatatttttaaagtcgggaattttcgtcgtttcaaacgaaattttggcagagaggttactt 25550405  T
Q  101 tgaagtacctcattttttattccga 125  Q
    |||||||||||||||||||||||||    
T  25550406 tgaagtacctcattttttattccga 25550430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 11279848 - 11279982
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||| |||||| ||| || |||||||||||||||||||||| | ||||||||| |||||||| ||||||||   ||||||||||||||    
T  11279848 aaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaaagaggttactt 11279947  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||||||||||| || ||||||    
T  11279948 tgaagtacctcattttttattccgagtcggaccct 11279982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 25991861 - 25991995
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||| |||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||  ||||||||   | |||||||||||    
T  25991861 aaatgttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagaagaaatttcggtagagaggttactt 25991960  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    |||||||||||||||||||||| || || ||||||    
T  25991961 tgaagtacctcattttttattcagagtcggaccct 25991995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 5994710 - 5994827
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||||||||| | ||||||   ||||||||||||||    
T  5994710 aaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacaaaattttggcaaagaggttactt 5994809  T
Q  101 tgaagtacctcatttttt 118  Q
    ||||||||||||||||||    
T  5994810 tgaagtacctcatttttt 5994827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 25506595 - 25506461
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||| ||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||| || |||||||||  || |||||||||||    
T  25506595 aaattttgatcacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgttttagacgaaatttcggcagagaggttactt 25506496  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    | || |||||||||||| ||||||| |||| ||||    
T  25506495 taaaatacctcatttttgattccgagtcaggccct 25506461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 23925346 - 23925481
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||| || |||  | |||||||||   | ||| |||||||    
T  23925346 aaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcatttttgacgaaatttcggtagagatgttactt 23925445  T
Q  101 tgaagtacctcatttttt-attccgaatcagaccct 135  Q
    |||||||||||||||||| ||||||| |||| ||||    
T  23925446 tgaagtacctcattttttgattccgagtcaggccct 23925481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 26526708 - 26526631
Alignment:
Q  49 aaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaa 126  Q
    |||||||||||||||||||||||||| |||||| ||  || || |||||||||||| ||||||||||||  |||||||    
T  26526708 aaagtcgggaattttcgtcgtttcagacgaaatatcggcagagtggttactttgaattacctcatttttggttccgaa 26526631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 5489173 - 5489132
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgt 42  Q
    ||||||||||||||||||||||| ||| || |||||||||||    
T  5489173 aaattttgaccacttttctctattcttacccattttattcgt 5489132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13490204 - 13490269
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgt 66  Q
    |||||||||||||||||||||||  ||  | ||||||||||||| | ||||  |||||||||||||    
T  13490204 aaattttgaccacttttctctatttttatccattttattcgtatctgtaaaaccgggaattttcgt 13490269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 8e-49; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 8154698 - 8154564
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||| |||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||    
T  8154698 aaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaaagaggttactt 8154599  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||||||||||| || ||||||    
T  8154598 tgaagtacctcattttttattccgagtcggaccct 8154564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 50824363 - 50824497
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||||||||| |||||||||  || |||||||||||    
T  50824363 aaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggcagagaggttactt 50824462  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||||||||||| || ||||||    
T  50824463 tgaagtacctcattttttattccgagtcggaccct 50824497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 50851497 - 50851363
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||||||||| |||||||||  || |||||||||||    
T  50851497 aaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggcagagaggttactt 50851398  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||||||||||| || ||||||    
T  50851397 tgaagtacctcattttttattccgagtcggaccct 50851363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 41006567 - 41006701
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||| |||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||| ||||||||||    
T  41006567 aaattttgaccatttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactt 41006666  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||| ||||||| || ||||||    
T  41006667 tgaagtacctcatttttgattccgagtcggaccct 41006701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 41015347 - 41015481
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||| |||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||| ||||||||||    
T  41015347 aaattttgaccatttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactt 41015446  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||| ||||||| || ||||||    
T  41015447 tgaagtacctcatttttgattccgagtcggaccct 41015481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 14538659 - 14538534
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaac-aaagaggttact 99  Q
    ||||||||||||||||||||||| |||  | ||||||||| ||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||||    
T  14538659 aaattttgaccacttttctctattcttatccattttattcatatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcaaaagaggttact 14538560  T
Q  100 ttgaagtacctcattttttattccga 125  Q
    ||||||||||||||||||||||||||    
T  14538559 ttgaagtacctcattttttattccga 14538534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 2211250 - 2211384
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||| || |||||||||  |||||||| || ||    
T  2211250 aaattttgaccacttttctctattcttacctattttattcgtatttttaaagtcaggaattttcgtcgtttaagacgaaatttcggcaaagagggtattt 2211349  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    | || |||||||||||||||||||| |||| ||||    
T  2211350 taaaatacctcattttttattccgagtcaggccct 2211384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 27341389 - 27341254
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| |||  | ||||||||| ||||||||||||||||||||||||||||||||| |||||||||  || | |||||||||    
T  27341389 aaattttgaccacttttctctattcttatccattttattcatatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcagaaaggttactt 27341290  T
Q  101 tgaagtacctcatt-ttttattccgaatcagaccct 135  Q
    |||||||||||||| ||||||||||| |||| ||||    
T  27341289 tgaagtacctcatttttttattccgagtcaggccct 27341254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 28470271 - 28470137
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||||||||||||||  | ||||||||||||||||||||||| | ||||||||||||||||| ||||||||| ||||| || |||||     
T  28470271 aaattttgaccacttttctctatccttatccattttattcgtatttttaaagtcagaaattttcgtcgtttcagacgaaatttcgacaaa-agattacta 28470173  T
Q  101 tgaagtacctcattttttattccgaatcagaccctt 136  Q
    |||||||||||||||||||||| || || |||||||    
T  28470172 tgaagtacctcattttttattctgagtcggaccctt 28470137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 9525488 - 9525364
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||| ||||||||||||| ||| || ||||||||||||||||||||||||||||||||||| |||| || |||||||||  || | |||||||||    
T  9525488 aaattttgatcacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgttgttttagacgaaatttcggcagaaaggttactt 9525389  T
Q  101 tgaagtacctcattttttattccga 125  Q
    | || ||||||||||||||||||||    
T  9525388 taaaatacctcattttttattccga 9525364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 9555162 - 9555038
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||| ||||||||||||| ||| || |||||| |||||||||||||||||||||||||||| |||| || |||||||||  || | |||||||||    
T  9555162 aaattttgatcacttttctctattcttacccattttactcgtatttttaaagtcgggaattttcgttgttttagacgaaatttcggcagaaaggttactt 9555063  T
Q  101 tgaagtacctcattttttattccga 125  Q
    | || ||||||||||||||||||||    
T  9555062 taaaatacctcattttttattccga 9555038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 17933666 - 17933780
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||| ||||||||||  || || ||||||||||||||||||||||||| |||||||||  |||||| |||||||||  |  |||||||||||    
T  17933666 aaattttgaccaattttctctatttttacccattttattcgtatttttaaagtcggaaattttcgttatttcagacgaaatttcttcggagaggttactt 17933765  T
Q  101 tgaagtacctcattt 115  Q
    |||||||||||||||    
T  17933766 tgaagtacctcattt 17933780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 43470575 - 43470492
Alignment:
Q  33 ttttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactttgaagtacctcatttt 116  Q
    |||||||||||||||||||| || |||||||  ||||||||| |||||||||  || |||||||||||||||||||||||||||    
T  43470575 ttttattcgtatttttaaagccgagaattttattcgtttcagacgaaatttcggcagagaggttactttgaagtacctcatttt 43470492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 16816258 - 16816145
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||||||||||  || |  ||||||||||||||||||||| ||| |||||||||  |||||| ||||||||  ||  ||||| |||||    
T  16816258 aaattttgaccacttttctctatttttactcattttattcgtatttttaaagccggaaattttcgttatttcagacgaaattttgacggagagg-tactt 16816160  T
Q  101 tgaagtacctcattt 115  Q
    |||||||||||||||    
T  16816159 tgaagtacctcattt 16816145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 17919210 - 17919324
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||||||||||  ||  | ||||||||||||||||||||| ||  |||||||||  |||||| |||||||||  |  |||||||||||    
T  17919210 aaattttgaccacttttctctatttttatccattttattcgtatttttaaagccgaaaattttcgttatttcagacgaaatttcgtcggagaggttactt 17919309  T
Q  101 tgaagtacctcattt 115  Q
    | |||||||||||||    
T  17919310 taaagtacctcattt 17919324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 17628276 - 17628329
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtc 54  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||||    
T  17628276 aaattttgaccacttttctctattcttacccattttattcgtatttttaaagtc 17628329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 18349567 - 18349650
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttc 84  Q
    |||||||||| ||||||||||||  || |  |||||||||||| ||||||| |||| ||| | |||||||| || |||||||||    
T  18349567 aaattttgacaacttttctctatttttacacattttattcgtacttttaaaatcggaaatgtccgtcgttttagacgaaatttc 18349650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 21186758 - 21186841
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttc 84  Q
    ||||||||||||||||| ||| |  ||  | |||||||||||| |||||||| || |||||||||| ||||||  |||||||||    
T  21186758 aaattttgaccacttttatctgtttttatccattttattcgtacttttaaagccgagaattttcgttgtttcaaacgaaatttc 21186841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 16288693 - 16288733
Alignment:
Q  76 cgaaatttcaacaaagaggttactttgaagtacctcatttt 116  Q
    |||||||||  || |||||||||||||||||||||||||||    
T  16288693 cgaaatttcggcagagaggttactttgaagtacctcatttt 16288733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 31276600 - 31276640
Alignment:
Q  76 cgaaatttcaacaaagaggttactttgaagtacctcatttt 116  Q
    ||||||||| ||||  |||||||||||||||||||||||||    
T  31276600 cgaaatttcgacaagaaggttactttgaagtacctcatttt 31276640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 8e-49; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 3432944 - 3432810
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||| |||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||    
T  3432944 aaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaaagaggttactt 3432845  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||||||||||| || ||||||    
T  3432844 tgaagtacctcattttttattccgagtcggaccct 3432810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 32137808 - 32137684
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||| ||||||||||||| |||  | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||    
T  32137808 aaattttgatcacttttctctattcttatccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaataagttactt 32137709  T
Q  101 tgaagtacctcattttttattccga 125  Q
    |||||||||||||||||||||||||    
T  32137708 tgaagtacctcattttttattccga 32137684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 31539965 - 31540099
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||| ||||||||||    
T  31539965 aaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactt 31540064  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||| ||||||| || ||||||    
T  31540065 tgaagtacctcatttttgattccgagtcggaccct 31540099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 31548534 - 31548668
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||| ||||||||||    
T  31548534 aaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactt 31548633  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||| ||||||| || ||||||    
T  31548634 tgaagtacctcatttttgattccgagtcggaccct 31548668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 35104118 - 35103984
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||| |||||||||||||||||||| ||||||||   ||| ||||||||||    
T  35104118 aaattttgaccacttttctctattcttacccattttattcgtatttttaaagttgggaattttcgtcgtttcagacgaaattttggcaaggaggttactt 35104019  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||| ||||||| || ||||||    
T  35104018 tgaagtacctcatttttgattccgagtcggaccct 35103984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 41746747 - 41746622
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaac-aaagaggttact 99  Q
    ||||||||||||||||| ||||| |||  | ||||||||| ||||||||||||||||||||||||||||||||| | |||||||  | ||||||||||||    
T  41746747 aaattttgaccacttttatctattcttatccattttattcatatttttaaagtcgggaattttcgtcgtttcagacaaaatttcggcaaaagaggttact 41746648  T
Q  100 ttgaagtacctcattttttattccga 125  Q
    ||||||||||||||||||||||||||    
T  41746647 ttgaagtacctcattttttattccga 41746622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 29221542 - 29221429
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||| ||||||||||||  || || ||||||||||||||||||||||||| ||||||||   |||||| |||||||||  || ||||| || ||    
T  29221542 aaattttgactacttttctctatttttacccattttattcgtatttttaaagtcggaaattttcgctatttcagacgaaatttcggcagagagg-tattt 29221444  T
Q  101 tgaagtacctcattt 115  Q
    |||| ||||||||||    
T  29221443 tgaaatacctcattt 29221429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 44320246 - 44320132
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||  |  || || |||||||||||||||| || | || |||   |||||||||||| |||||||||| ||  ||||||||||    
T  44320246 aaattttgaccacttttctcgctttttacccattttattcgtattttaaacgccgagaaggatcgtcgtttcagacgaaatttcagcagggaggttactt 44320147  T
Q  101 tgaagtacctcattt 115  Q
      |||||||||||||    
T  44320146 gaaagtacctcattt 44320132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 28457629 - 28457681
Alignment:
Q  63 tcgtcgtttcaggcgaaatttcaacaaagaggttactttgaagtacctcattt 115  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||||| ||||||    
T  28457629 tcgtcgtttcagacgaaatttcgacagagaggttactttgaagtacatcattt 28457681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 51058411 - 51058330
Alignment:
Q  32 attttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactttgaagtacctcatt 114  Q
    |||||||||||||||||||||  |||||||||||| ||||||  |||||||||| || | ||| || |||||| |||||||||    
T  51058411 attttattcgtatttttaaagctgggaattttcgttgtttcaaacgaaatttcagcagaaagg-tattttgaaatacctcatt 51058330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 8241491 - 8241438
Alignment:
Q  62 ttcgtcgtttcaggcgaaatttcaacaaagaggttactttgaagtacctcattt 115  Q
    ||||||||||||| |||||||||   | |||||||||||| |||||||||||||    
T  8241491 ttcgtcgtttcagacgaaatttcggtagagaggttactttaaagtacctcattt 8241438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 13462775 - 13462819
Alignment:
Q  69 tttcaggcgaaatttcaacaaagaggttactttgaagtacctcat 113  Q
    |||||| ||||||||  | ||||||||||||||||||||||||||    
T  13462775 tttcagacgaaatttggataaagaggttactttgaagtacctcat 13462819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 33046 - 33180
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||| ||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  33046 aaattttgaccacttttctctattcttacccattttatacgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcaaagaggttactt 33145  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    | ||||||||||||||||||||||| || ||||||    
T  33146 taaagtacctcattttttattccgagtcggaccct 33180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 138 - 4
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||| |||||| ||| || |||||||||||||||||||||| | ||||||||| |||||||| ||||||||   ||||||||||||||    
T  138 aaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaaagaggttactt 39  T
Q  101 tgaagtacctcattttttattccgaatcagaccct 135  Q
    ||||||||||||||||||||||||| || ||||||    
T  38 tgaagtacctcattttttattccgagtcggaccct 4  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 15824 - 15941
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||||||||||  || || ||||||||||||||||||||||||| ||||||||||||||||| |||||||||  || |||||||||||    
T  15824 aaattttgaccacttttctctatttttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggcagagaggttactt 15923  T
Q  101 tgaagtacctcatttttt 118  Q
    ||||||||||||||||||    
T  15924 tgaagtacctcatttttt 15941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 121239 - 121363
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||   | |||||||||||    
T  121239 aaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggtagagaggttactt 121338  T
Q  101 tgaagtacctcattttttattccga 125  Q
    |||||||  |||||||| |||||||    
T  121339 tgaagtaaatcatttttgattccga 121363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 11004 - 11119
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| ||| || |||||||||||||| |||||||||| ||||||||||||||||| |||||||||  || |||||||||||    
T  11004 aaattttgaccacttttctctattcttacccattttattcgtattgttaaagtcggaaattttcgtcgtttcagacgaaatttcggcagagaggttactt 11103  T
Q  101 tgaagtacctcatttt 116  Q
    ||||||||||||||||    
T  11104 tgaagtacctcatttt 11119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 4401 - 4518
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||   |||||||||| ||| || ||||||||| ||||||||||||||| ||||||| ||||||||| ||||||||| ||| |||||||||||    
T  4401 aaattttgacattttttctctattcttacccattttattcatatttttaaagtcggtaattttcatcgtttcagacgaaatttcgacagagaggttactt 4500  T
Q  101 tgaagtacctcatttttt 118  Q
    ||||||||||||||||||    
T  4501 tgaagtacctcatttttt 4518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 23475 - 23600
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttt-taaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttact 99  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||| ||||||||||||||||| || |||| | |||||||||   | ||||||||||    
T  23475 aaattttgaccacttttctctattcttacccattttattcgtattttttaaagtcgggaattttcatcatttctgacgaaatttcggtagagaggttact 23574  T
Q  100 ttgaagtacctcattttttattccga 125  Q
    |||||||||||||||||| |||||||    
T  23575 ttgaagtacctcatttttgattccga 23600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 983 - 859
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||  ||||||||| ||| || |||||||||||||||||||||  |||||||||||||||||||| |||||||||  || | |||||||||    
T  983 aaattttgaccagctttctctattcttacccattttattcgtatttttaaagctgggaattttcgtcgtttcagacgaaatttcggcagaaaggttactt 884  T
Q  101 tgaagtacctcattttttattccga 125  Q
    |||| |||||||||||| |||||||    
T  883 tgaaatacctcatttttgattccga 859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 40887 - 40787
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||||| |||  | |||||||||||||||||||||||| | |||||| ||||||||| |||||| || |||||||||||||||    
T  40887 aaattttgaccacttttctctattcttatccattttattcgtatttttaaagtcgagcattttcatcgtttcagacgaaatctcgacaaagaggttactt 40788  T
Q  101 t 101  Q
    |    
T  40787 t 40787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 150 - 264
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    |||||||||||||||||||||||   | || ||||||||||||||||||||| | | |||||||||  |||||| ||||||||| || ||||| ||||||    
T  150 aaattttgaccacttttctctatttctacccattttattcgtatttttaaagccagaaattttcgttatttcagacgaaatttcgacgaagagtttactt 249  T
Q  101 tgaagtacctcattt 115  Q
    |||||||||||||||    
T  250 tgaagtacctcattt 264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 7244 - 7129
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactt 100  Q
    ||||||||||||||||||||| |  || || |||||||| ||| |||||||| || |||||||||| ||||||| |||||||||   |   |||||||||    
T  7244 aaattttgaccacttttctctgtttttacccattttatttgtacttttaaagccgagaattttcgttgtttcagacgaaatttcgggaggaaggttactt 7145  T
Q  101 tgaagtacctcatttt 116  Q
    ||||||||||||||||    
T  7144 tgaagtacctcatttt 7129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 20505 - 20422
Alignment:
Q  32 attttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactttgaagtacctcattt 115  Q
    ||||| |||||| |||||||| || |||||||||| ||||||| |||||||||  || ||||||||||||| ||||||||||||    
T  20505 attttgttcgtacttttaaagccgagaattttcgttgtttcagacgaaatttcggcagagaggttactttggagtacctcattt 20422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 58 - 136
Target Start/End: Complemental strand, 65701 - 65622
Alignment:
Q  58 aattttcgtcgtttcaggcgaaatttcaacaaagaggttactttgaagtacctcatt-ttttattccgaatcagaccctt 136  Q
    ||||||||| ||||| | ||||||||| ||||||| ||||||||||||||||||||| ||||||||||| || |||||||    
T  65701 aattttcgttgtttcggacgaaatttcgacaaagatgttactttgaagtacctcatttttttattccgagtcggaccctt 65622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 65510 - 65470
Alignment:
Q  262 tgtcaataagtccgaaggttttcggcagtggtccaaatttc 302  Q
    ||||||| |||||||| ||||||||||||||||||||||||    
T  65510 tgtcaatgagtccgaaagttttcggcagtggtccaaatttc 65470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 10651 - 10595
Alignment:
Q  60 ttttcgtcgtttcaggcgaaatttcaacaaagaggttactttgaagtacctcatttt 116  Q
    ||||||||| ||||| |||||||||  ||||||||||||||||||||||||||||||    
T  10651 ttttcgtcgcttcagacgaaatttcggcaaagaggttactttgaagtacctcatttt 10595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 116
Target Start/End: Complemental strand, 15837 - 15760
Alignment:
Q  39 tcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttcaacaaagaggttactttgaagtacctcatttt 116  Q
    |||| ||||||||| | ||||||||||||| ||||| ||||||| |   | | |||||||||||||||||||||||||    
T  15837 tcgtctttttaaagccaggaattttcgtcgcttcagacgaaattacggtagataggttactttgaagtacctcatttt 15760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 123
Target Start/End: Complemental strand, 7620 - 7587
Alignment:
Q  90 agaggttactttgaagtacctcattttttattcc 123  Q
    ||||||||||||||||||||||||||||||||||    
T  7620 agaggttactttgaagtacctcattttttattcc 7587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 61380 - 61418
Alignment:
Q  78 aaatttcaacaaagaggttactttgaagtacctcatttt 116  Q
    |||||||| || |||||||||||||||||||||||||||    
T  61380 aaatttcagcatagaggttactttgaagtacctcatttt 61418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1380 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1380
Description:

Target: scaffold1380; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 557 - 597
Alignment:
Q  76 cgaaatttcaacaaagaggttactttgaagtacctcatttt 116  Q
    ||||||||| ||| ||||||||||||| |||||||||||||    
T  557 cgaaatttcgacagagaggttactttggagtacctcatttt 597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 192539 - 192623
Alignment:
Q  1 aaattttgaccacttttctctatccttgcctattttattcgtatttttaaagtcgggaattttcgtcgtttcaggcgaaatttca 85  Q
    |||||||||||||||||||||||  || |  ||||| |||||| |||||||  ||| ||| | |||||||| || ||||||||||    
T  192539 aaattttgaccacttttctctatttttacagattttgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaatttca 192623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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