View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2673_low_26 (Length: 294)
Name: NF2673_low_26
Description: NF2673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2673_low_26 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 260; Significance: 1e-145; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 43745105 - 43745385
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
43745105 |
ctgcagcagtgggttcattgattatcttcataacatcaagcccagcaatggcaccagcatcta--gtggctttccgctgataatcattgaaataagccgg |
43745202 |
T |
|
| Q |
101 |
cacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacatagg |
200 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
43745203 |
cacagtaacaactgcattcttgacaggcaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgagatttcttcggcacatagg |
43745302 |
T |
|
| Q |
201 |
tgcttctcctgtcccttgtacttaacagaaatcacgggtttgtcattcaatccggaaatgaccttgaacggccacaacttcat |
283 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43745303 |
tgcttctcctgtcccttgtacttaacagaaatcacgggtttgtcattcaatccggaaatgaccttgaacggccacaacttcat |
43745385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 190
Target Start/End: Original strand, 12528765 - 12528949
Alignment:
| Q |
6 |
gcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccggcacag |
105 |
Q |
| |
|
||||||||||| ||||||||| || |||| || ||||||||| |||||||||| |||||| ||||| ||||||||||||| || ||||| | |
|
|
| T |
12528765 |
gcagttggttcgttgattatccgtattacattgaggccagcaatgacaccagcatccttggtggctcgtcgctgcgaatcattgaaatacgctggcaccg |
12528864 |
T |
|
| Q |
106 |
taacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttc |
190 |
Q |
| |
|
||| ||||||||||| ||||| | | | ||||| ||||||||||| ||||||| || |||||||||||| ||||||||||| |
|
|
| T |
12528865 |
taatcactgcattcttaacaggtgactcaagaaatgcatctgcaatctctcgcatctgtgatagaatcatagaggatatttcttc |
12528949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 182; Significance: 2e-98; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 3 - 280
Target Start/End: Original strand, 28220209 - 28220486
Alignment:
| Q |
3 |
gcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccggca |
102 |
Q |
| |
|
|||||||| |||||||||| |||| | | ||||| || |||||||||| ||| ||||||| |||||||||||||||||||||||||||||||| |||| |
|
|
| T |
28220209 |
gcagcagtgggttcattgactatccttagaacatttagaccagcaatggtacctgcatctatggtggctttccgctgataatcattgaaataagcaggca |
28220308 |
T |
|
| Q |
103 |
cagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacataggtg |
202 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
28220309 |
cagtaataactgcattcttgacaggaaattccaaaaaggcctctgcaatctcacgcatctttgttagaaccatagatgagatttcttcggcacataggtg |
28220408 |
T |
|
| Q |
203 |
cttctcctgtcccttgtacttaacagaaatcacgggtttgtcattcaatccggaaatgaccttgaacggccacaactt |
280 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||| ||||||||||| |
|
|
| T |
28220409 |
cttctcctgtcccttgtacttaacagaaatcatgggtttgtcgttcgttccggaaatgaccttgaatggccacaactt |
28220486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 98 - 283
Target Start/End: Complemental strand, 42555759 - 42555574
Alignment:
| Q |
98 |
cggcacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacat |
197 |
Q |
| |
|
|||||||||||||||||||||||||||||| | || |||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| |
|
|
| T |
42555759 |
cggcacagtaacaactgcattcttgacaggcatttccaaaaatgcctctgcaatcttgcgcatctttgttagaatcatagatgagatttcttcggcgcat |
42555660 |
T |
|
| Q |
198 |
aggtgcttctcctgtcccttgtacttaacagaaatcacgggtttgtcattcaatccggaaatgaccttgaacggccacaacttcat |
283 |
Q |
| |
|
||||| ||||||||||||| |||| | ||| |||||| ||| ||| |||| | |||||||||||||||||| |||||||||||||| |
|
|
| T |
42555659 |
aggtgtttctcctgtccctcgtacgttacataaatcatgggcttgccatttattccggaaatgaccttgaatggccacaacttcat |
42555574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 42555830 - 42555759
Alignment:
| Q |
3 |
gcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttc |
74 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| || |||||||| | ||| ||||||| ||||||||| |
|
|
| T |
42555830 |
gcagcagtgggttcattgattatcttcataacattcagaccagcaatagtacctgcatctattgtggctttc |
42555759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 143; Significance: 4e-75; HSPs: 30)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 3147528 - 3147810
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||| || ||| |||||||| |||||||||||| || |||||||||||| ||||||||||||||| || |
|
|
| T |
3147528 |
ctgcagcagtaggttcattgattatccgcataatattaaggccagcaataacaccagcatctattgtcgctttccgctgagcatcattgaaataagcagg |
3147627 |
T |
|
| Q |
101 |
cacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacatagg |
200 |
Q |
| |
|
|| ||||||||||||||||||||||| |||| ||||| ||||||| ||| |||||||||||||||| ||||||||| |||||||| ||||||||| |
|
|
| T |
3147628 |
tacggtaacaactgcattcttgacaggcaattctaaaaactcctctgcagtcttgcgcatctttgttagaaccatagatgagatttcttcagcacatagg |
3147727 |
T |
|
| Q |
201 |
tgcttctcctgtcccttgtacttaacagaaatcacgggtttgtcattcaatccggaaatgaccttgaacggccacaacttcat |
283 |
Q |
| |
|
|||||||||||||||||| ||||||| ||||||| |||||||||||||| |||| ||||||||||||| ||||||||| |||| |
|
|
| T |
3147728 |
tgcttctcctgtcccttgcacttaaccgaaatcatgggtttgtcattcactccgcaaatgaccttgaatggccacaacatcat |
3147810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 8585618 - 8585341
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||||||| ||| |||||||||||||||||||| | |||||||| |||||| |||||||||||||||| || |
|
|
| T |
8585618 |
ctgcagcagtgggttcattgattatcctcataacattaaggccagcaatggcaccagcatccatggtggcttttcgctgagaatcattgaaataagcagg |
8585519 |
T |
|
| Q |
101 |
cacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacatagg |
200 |
Q |
| |
|
|||||| ||||||||||| | ||||| ||| |||| ||||||||||||||| ||| ||||| || || |||||||||||||| || ||||||||| |
|
|
| T |
8585518 |
cacagtcacaactgcattttgaacaggtgatttcaaatatgtctctgcaatcttcttcatgtttgtgaggatgatagatgatatttcctcagcacatagg |
8585419 |
T |
|
| Q |
201 |
tgcttctcctgtcccttgtacttaacagaaatcacgggtttgtcattcaatccggaaatgaccttgaacggccacaac |
278 |
Q |
| |
|
| ||| || || |||||||||||||||| ||||| ||||||||||| | || || || |||||||| ||||||||| |
|
|
| T |
8585418 |
ttcttttcttgacccttgtacttaacagtaatcataggtttgtcattaacaccagagataaccttgaatggccacaac |
8585341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 3 - 227
Target Start/End: Complemental strand, 7877643 - 7877419
Alignment:
| Q |
3 |
gcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccggca |
102 |
Q |
| |
|
||||||||||||||||| |||||| |||||||| || || |||| |||||||||||| |||||||| || ||| ||||||||||||||||||||| |
|
|
| T |
7877643 |
gcagcagttggttcattaattatccgcataacattgaggccggcaactgcaccagcatcttttgtggcttttcgttgagaatcattgaaataagccggca |
7877544 |
T |
|
| Q |
103 |
cagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacataggtg |
202 |
Q |
| |
|
||||||||||||||||||||||||| | | |||||| ||||||||||||| ||||||||||| || ||||| ||||||||||| |||||||| | ||| |
|
|
| T |
7877543 |
cagtaacaactgcattcttgacaggtgactccaaaaacttctctgcaatctcgcgcatctttgtaaggatcatggatgatatttcctcggcacaaaagtg |
7877444 |
T |
|
| Q |
203 |
cttctcctgtcccttgtacttaaca |
227 |
Q |
| |
|
||| |||| ||||| ||||||||| |
|
|
| T |
7877443 |
cttttcctcgcccttatacttaaca |
7877419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 274
Target Start/End: Original strand, 8628788 - 8629061
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
|||||||||| || |||||||||||| ||||||||| ||| ||||||||||||||||||| | |||||||| |||||| |||||||||||||||| || |
|
|
| T |
8628788 |
ctgcagcagtggggtcattgattatcctcataacattaaggccagcaatggcaccagcattcatggtggcttttcgctgagaatcattgaaataagcagg |
8628887 |
T |
|
| Q |
101 |
cacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacatagg |
200 |
Q |
| |
|
||| || ||||||||||| || ||||| ||| |||| | | ||||||||||| ||| |||| || || |||||||||||||| || ||||||||| |
|
|
| T |
8628888 |
cacggtgacaactgcattttttacaggtgatttcaaataagcctctgcaatcttcttcatatttgcaaggataatagatgatatttcctcagcacatagg |
8628987 |
T |
|
| Q |
201 |
tgcttctcctgtcccttgtacttaacagaaatcacgggtttgtcattcaatccggaaatgaccttgaacggcca |
274 |
Q |
| |
|
| |||||| || |||||||||||||||| ||||| || |||||||| | || ||||| |||||||| ||||| |
|
|
| T |
8628988 |
ttcttctcttgacccttgtacttaacagcaatcataggcttgtcattaagaccagaaataaccttgaatggcca |
8629061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 6 - 227
Target Start/End: Original strand, 8602235 - 8602456
Alignment:
| Q |
6 |
gcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccggcacag |
105 |
Q |
| |
|
|||||||| |||||||||||| ||| |||| || ||||||||||||||||||||| |||||||| |||||| ||||||| |||||||||||||||| |
|
|
| T |
8602235 |
gcagttggctcattgattatccgcattacattgagaccagcaatggcaccagcatcttttgtggcttttcgctgagaatcattaaaataagccggcacag |
8602334 |
T |
|
| Q |
106 |
taacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacataggtgctt |
205 |
Q |
| |
|
|||||||||||||||||||||| | | || ||| |||||||||| |||||||||||||| || | ||| ||||| ||||| || ||||| | |||||| |
|
|
| T |
8602335 |
taacaactgcattcttgacaggtgactccagaaacttctctgcaatttcacgcatctttgtaaggaccattgatgagatttcctcagcacagaagtgctt |
8602434 |
T |
|
| Q |
206 |
ctcctgtcccttgtacttaaca |
227 |
Q |
| |
|
||| ||||| ||||||||| |
|
|
| T |
8602435 |
ttccccacccttatacttaaca |
8602456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 8667675 - 8667952
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
|||| ||||| ||||||||||||||| || |||| ||| |||||||| | ||||||||||| ||||| || |||||| |||||||||| ||||| || |
|
|
| T |
8667675 |
ctgccgcagtaggttcattgattatccgaatgacattaagtccagcaatagtaccagcatctatggtggcctttcgctgagaatcattgaagtaagctgg |
8667774 |
T |
|
| Q |
101 |
cacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacatagg |
200 |
Q |
| |
|
|||||||||||| ||||||||||| || | || | ||| ||| |||| ||| ||||||||||| || | |||||| |||||||| || ||||| | | |
|
|
| T |
8667775 |
cacagtaacaacggcattcttgaccggcgaccccagatatgcctccgcaacctctcgcatctttgtaagcaccatagaagatatttcctcagcacaaaag |
8667874 |
T |
|
| Q |
201 |
tgcttctcctgtcccttgtacttaacagaaatcacgggtttgtcattcaatccggaaatgaccttgaacggccacaac |
278 |
Q |
| |
|
|||||||| || |||||||||||||||| ||||| ||||||||||| | || ||||| |||||||| ||||||||| |
|
|
| T |
8667875 |
tgcttctcttgacccttgtacttaacagtaatcataggtttgtcattaacaccagaaataaccttgaatggccacaac |
8667952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 10494286 - 10494009
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
|||||||||| ||||||||||||||| || |||| ||| |||||||| ||||||||||| | ||| || || || ||| |||| ||||| |||||||| |
|
|
| T |
10494286 |
ctgcagcagtaggttcattgattatccgaatgacattaaggccagcaatagcaccagcatcaatagtagcctttcgttgagaatcgttgaagtaagccgg |
10494187 |
T |
|
| Q |
101 |
cacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacatagg |
200 |
Q |
| |
|
|||||||||||| ||||||||||| || | |||| ||| |||||||| ||| ||||||||| | || | ||||||||||||||| |||||||| | | |
|
|
| T |
10494186 |
cacagtaacaacagcattcttgactggtgaccccaaatatgcctctgcaacctctcgcatctttataaggaccatagatgatatttcctcggcacaaaag |
10494087 |
T |
|
| Q |
201 |
tgcttctcctgtcccttgtacttaacagaaatcacgggtttgtcattcaatccggaaatgaccttgaacggccacaac |
278 |
Q |
| |
|
|||||||| || |||||||||||| | | ||||| ||||||||||| | || ||| | |||||||| ||||||||| |
|
|
| T |
10494086 |
tgcttctcttgacccttgtacttagcggtaatcataggtttgtcattgacacctgaagtaaccttgaatggccacaac |
10494009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 3 - 281
Target Start/End: Original strand, 8647135 - 8647410
Alignment:
| Q |
3 |
gcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccggca |
102 |
Q |
| |
|
||||| |||||||||||||||||| || | || ||| ||||||||||| || ||||||| ||||||||| ||||||||||||||||| || || |||| |
|
|
| T |
8647135 |
gcagctgttggttcattgattatccggatgatattaaggccagcaatggccccggcatctatagtggcttttcgctgataatcattgaagtatgcaggca |
8647234 |
T |
|
| Q |
103 |
cagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacataggtg |
202 |
Q |
| |
|
||||||||||||||||||| ||||| | ||| || ||||||||| ||| ||||||||||| || ||||| ||||||||||| || ||||| | |
|
|
| T |
8647235 |
cagtaacaactgcattctttacaggggacattaaatatttctctgcaacctctcgcatctttgtgaggatcatcgatgatatttcctcagcacaataacg |
8647334 |
T |
|
| Q |
203 |
cttctcctgtcccttgtacttaacagaaatcacgggtttgtcattcaatccggaaatgaccttgaacggccacaacttc |
281 |
Q |
| |
|
|||||| | |||||||| |||||| ||||| |||||||||||||| || |||||||||||| |||||||||||| |
|
|
| T |
8647335 |
cttctcttcacccttgtatttaacaataatcatgggtttgtcattcacccc---aatgaccttgaatggccacaacttc |
8647410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 3 - 283
Target Start/End: Original strand, 6789770 - 6790050
Alignment:
| Q |
3 |
gcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccggca |
102 |
Q |
| |
|
||||| ||||||||||||||||| ||||||| ||| |||||||||||||||||||||| |||||||||||| ||| |||||||||||||||| |||| |
|
|
| T |
6789770 |
gcagctgttggttcattgattattcgtataacattaagaccagcaatggcaccagcatctaaagtggctttccgttgagaatcattgaaataagcaggca |
6789869 |
T |
|
| Q |
103 |
cagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacataggtg |
202 |
Q |
| |
|
|||||| ||||||||| || | | |||||| || |||| |||||||| |||||||| || || |||||||| || | ||| || ||||||| || |
|
|
| T |
6789870 |
cagtaataactgcattttttatctctgactgcaaatatttctcagcaatctcccgcatcttggtgaggatcatagacgaaacttcctcaacacatagttg |
6789969 |
T |
|
| Q |
203 |
cttctcctgtcccttgtacttaacagaaatcacgggtttgtcattcaatccggaaatgaccttgaacggccacaacttcat |
283 |
Q |
| |
|
|||||||| ||||| |||| |||| ||||| ||| |||||||| | || | |||||||||||| ||||| ||| |||| |
|
|
| T |
6789970 |
cttctcctcacccttatactcaacaacaatcatgggcttgtcattgacgccagcaatgaccttgaatggccaaaacatcat |
6790050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 12 - 283
Target Start/End: Original strand, 1301731 - 1302002
Alignment:
| Q |
12 |
ggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccggcacagtaacaa |
111 |
Q |
| |
|
|||||||| ||||||| || |||| ||| |||||||| ||||| ||||||| |||||||| |||||| |||||||||||| || ||||||||||||| |
|
|
| T |
1301731 |
ggttcattaattatctgaatgacattaaggccagcaattgcaccggcatctatggtggcttttcgctgagaatcattgaaatgtgcaggcacagtaacaa |
1301830 |
T |
|
| Q |
112 |
ctgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacataggtgcttctcctg |
211 |
Q |
| |
|
| ||||| | || || | | | ||||||||||||| || |||||||| || || | ||||||||||||||| || | || | |||||||||||| |
|
|
| T |
1301831 |
cagcatttgtcactggtgacattagatatgtctctgcaatttctcgcatcttcgtaaggaccatagatgatatttcctccacgcaaaagtgcttctcctg |
1301930 |
T |
|
| Q |
212 |
tcccttgtacttaacagaaatcacgggtttgtcattcaatccggaaatgaccttgaacggccacaacttcat |
283 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| |||| ||||||||||| ||||||||| |||| |
|
|
| T |
1301931 |
acccttgtacttaacaacaatcacgggtttgtcattcacaccggcgatgaccttgaatggccacaacatcat |
1302002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 13333368 - 13333145
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
|||||||||| |||||||||||||| || | || ||| |||||||| ||||||||||||| ||||| || |||||| |||||||||| |||||||| |
|
|
| T |
13333368 |
ctgcagcagtaggttcattgattattcgaatgatattaaggccagcaatagcaccagcatctatggtggcctttcgctgagaatcattgaagtaagccgg |
13333269 |
T |
|
| Q |
101 |
cacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacatagg |
200 |
Q |
| |
|
|||||||||||| ||||||||||| || | || | ||| |||||||| ||| ||||||||||| || | ||||||||||||||| |||||||| | | |
|
|
| T |
13333268 |
cacagtaacaacggcattcttgactggtgaccccatatatgcctctgcaacctctcgcatctttgtaaggaccatagatgatatttcctcggcacaaaag |
13333169 |
T |
|
| Q |
201 |
tgcttctcctgtcccttgtactta |
224 |
Q |
| |
|
|||||||| || |||||| ||||| |
|
|
| T |
13333168 |
tgcttctcttgacccttgcactta |
13333145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 227
Target Start/End: Original strand, 8590899 - 8591120
Alignment:
| Q |
6 |
gcagttggttcattgattatcttcataacat-caagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccggcaca |
104 |
Q |
| |
|
|||||||||||||| |||||| ||| |||| |||||| ||||||| ||||||||||| || ||||||| |||| ||||||| |||||||| |||||| |
|
|
| T |
8590899 |
gcagttggttcattaattatccgcattacattcaagcc-agcaatgacaccagcatctttggtagctttcctctgagaatcattaaaataagctggcaca |
8590997 |
T |
|
| Q |
105 |
gtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacataggtgct |
204 |
Q |
| |
|
||||||||||||||||||||||| | | |||||| | || |||||||| ||||||||||| |||| ||| ||||| ||||| || ||||| || ||| |
|
|
| T |
8590998 |
gtaacaactgcattcttgacaggtgactccaaaaacttttcagcaatctctcgcatctttgtgagaaccatggatgagatttcctccgcacaaagacgct |
8591097 |
T |
|
| Q |
205 |
tctcctgtcccttgtacttaaca |
227 |
Q |
| |
|
| |||| ||||||||||||||| |
|
|
| T |
8591098 |
tttcctcacccttgtacttaaca |
8591120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 8636255 - 8636069
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
|||||||||||||||||||||||||| || |||| ||| || |||||||||||||||||| |||| ||| |||||| |||||||||||||||| || |
|
|
| T |
8636255 |
ctgcagcagttggttcattgattatccgaattacattaaggccggcaatggcaccagcatctttggtggatttacgctgagaatcattgaaataagcggg |
8636156 |
T |
|
| Q |
101 |
cacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttc |
187 |
Q |
| |
|
|||||||| |||||||||||||||| ||| || | ||| ||| |||||||| ||||||||||| || | |||||| |||||||| |
|
|
| T |
8636155 |
cacagtaatgactgcattcttgacagatgattccagatatgcctcagcaatctctcgcatctttgtcaggaccatagacgatatttc |
8636069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 8659619 - 8659901
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
|||||||||| |||||||| ||||||| || |||| ||| |||||||||||||| | ||||| |||||||| |||||| |||||||||| || || || |
|
|
| T |
8659619 |
ctgcagcagtaggttcattaattatctgaatgacattaaggccagcaatggcaccggaatctatggtggcttttcgctgagaatcattgaactatgcagg |
8659718 |
T |
|
| Q |
101 |
cacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacatagg |
200 |
Q |
| |
|
||| |||||||| |||||||| ||||| | | | |||||||||||| || ||||| ||||| || | ||||||||||||||| || ||||| | | |
|
|
| T |
8659719 |
cactgtaacaacagcattcttcacaggtgacattagatatgtctctgcaacttctcgcatttttgtaagtaccatagatgatatttcctccgcacaaaag |
8659818 |
T |
|
| Q |
201 |
tgcttctcctgtcccttgtacttaacagaaatcacgggtttgtcattcaatccggaaatgaccttgaacggccacaacttcat |
283 |
Q |
| |
|
||||||||||| |||||||||| |||| ||||| | ||||||| |||| || | || |||||||| ||||||||| |||| |
|
|
| T |
8659819 |
tgcttctcctgacccttgtactgaacattaatcatgagtttgtcgttcacaccagcgataaccttgaatggccacaacatcat |
8659901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 227
Target Start/End: Complemental strand, 8382783 - 8382562
Alignment:
| Q |
6 |
gcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccggcacag |
105 |
Q |
| |
|
|||||||| |||||||||||| ||| |||| || |||||||| |||||||||||| ||||||||||| ||| ||||||||||||| || ||||| | |
|
|
| T |
8382783 |
gcagttggctcattgattatccgcattacattgaggccagcaatcgcaccagcatcttttgtggctttccgttgagaatcattgaaatatgcaggcacgg |
8382684 |
T |
|
| Q |
106 |
taacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacataggtgctt |
205 |
Q |
| |
|
|||||||| |||||| || ||| | | |||||| ||||||||||||||||||||||| | || | |||||| || ||||| |||||||| ||||| || |
|
|
| T |
8382683 |
taacaactacattctcgataggtgactccaaaaaattctctgcaatctcacgcatctttttgaggaccatagaggagatttcctcggcacaaaggtgttt |
8382584 |
T |
|
| Q |
206 |
ctcctgtcccttgtacttaaca |
227 |
Q |
| |
|
|||| ||||| ||||||||| |
|
|
| T |
8382583 |
ttcctcacccttatacttaaca |
8382562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 187
Target Start/End: Complemental strand, 29581751 - 29581567
Alignment:
| Q |
3 |
gcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccggca |
102 |
Q |
| |
|
|||||||||||||| ||||||||| |||| |||| || ||||| || ||||||||| |||||||| |||||| |||||||||||||||| |||| |
|
|
| T |
29581751 |
gcagcagttggttcgttgattatcctcattacattgaggccagctataatgccagcatctttggtggcttttcgctgagaatcattgaaataagcaggca |
29581652 |
T |
|
| Q |
103 |
cagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttc |
187 |
Q |
| |
|
| |||| ||||||||||| ||||| |||| ||||||| |||||||||| ||| ||||||||| || ||||||||||||||||| |
|
|
| T |
29581651 |
cggtaatcactgcattctttacaggcaattccaaaaatttctctgcaatatcatgcatctttgagaggatcatagatgatatttc |
29581567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 17268195 - 17268469
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||| |||| ||| ||||||||| |||||||||||| |||||||| |||||| |||| ||||| |||||||| |
|
|
| T |
17268195 |
ctgcagcagttggttcattgattaccttcaatacattaaggccagcaatgacaccagcatctatggtggcttttcgctgagaatcgttgaagtaagccgg |
17268294 |
T |
|
| Q |
101 |
cacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacatagg |
200 |
Q |
| |
|
||||||| || |||||| | || | ||| | | || ||| |||||||| ||||||||||| || | |||||| || ||||| || ||||| | | |
|
|
| T |
17268295 |
gacagtaatgacagcattcataaccgatgattctagatattcctcagcaatctcccgcatctttgtgagtaccatagacgaaatttcctctgcacaaaag |
17268394 |
T |
|
| Q |
201 |
tgcttctcctgtcccttgtacttaacagaaatcacgggtttgtcattca-atccggaaatgaccttgaacggccac |
275 |
Q |
| |
|
|| |||||| ||||||||||||| | ||||||| ||||||||||||| |||| | |||||||||||| |||||| |
|
|
| T |
17268395 |
tgtttctcccgtcccttgtacttgagggaaatcattggtttgtcattcatatcc-gcaatgaccttgaatggccac |
17268469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 29 - 227
Target Start/End: Complemental strand, 27830759 - 27830561
Alignment:
| Q |
29 |
cataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccggcacagtaacaactgcattcttgacagga |
128 |
Q |
| |
|
|||||||| ||| |||||||||||||| | ||||||||||||||| || ||| | |||||||||||||| ||||| || | ||||||||||| || || |
|
|
| T |
27830759 |
cataacattaaggccagcaatggcaccggaatctacagtggcttttcgttgagagtcattgaaataagctggcacggttattactgcattcttaaccggt |
27830660 |
T |
|
| Q |
129 |
aattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacataggtgcttctcctgtcccttgtacttaaca |
227 |
Q |
| |
|
|||||||| ||| ||| || ||||| ||||||||||| || | ||| ||||| ||||| || ||||||| ||| |||||||| | ||||||||||||| |
|
|
| T |
27830659 |
gattgcaaatatgcctccgcgatctctcgcatctttgtaaggaccattgatgaaatttcctccgcacataagtgtttctcctgactcttgtacttaaca |
27830561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 8654706 - 8654952
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
|||| ||||| |||||||||| |||| || || | ||| |||||||||||||||||||||| || ||||| |||||| | |||||||| || ||||| |
|
|
| T |
8654706 |
ctgcggcagtaggttcattgagtatccgaatgacgttaagtccagcaatggcaccagcatctatggttgcttttcgctgagagtcattgaagtatgccgg |
8654805 |
T |
|
| Q |
101 |
cacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacatagg |
200 |
Q |
| |
|
|||||||||||| |||| ||||| || || | ||| |||||||||||| ||||||||||| |||| | |||||||||||| || ||||| | |
|
|
| T |
8654806 |
cacagtaacaacgacatttttgacgggtgatccaaggtatgcctctgcaatctctcgcatctttgtaagaaccgcagatgatatttcctcagcacaaaat |
8654905 |
T |
|
| Q |
201 |
tgcttctcctgtcccttgtacttaacagaaatcacgggtttgtcatt |
247 |
Q |
| |
|
|||||||| || || ||||||||||||| ||||| |||||||||||| |
|
|
| T |
8654906 |
tgcttctcttgacctttgtacttaacagtaatcatgggtttgtcatt |
8654952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 42 - 283
Target Start/End: Complemental strand, 8640418 - 8640179
Alignment:
| Q |
42 |
ccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccggcacagtaacaactgcattcttgac---aggaaattgcaaaa |
138 |
Q |
| |
|
||||||||||| || ||||||| |||||||| |||||||||||||||| ||||| |||| |||||||||||||||||| || ||| ||| ||| |
|
|
| T |
8640418 |
ccagcaatggccccggcatctatggtggctttttgctgataatcattgaagtaagcaggcatagtaacaactgcattctttacggggggacatt--aaat |
8640321 |
T |
|
| Q |
139 |
atgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacataggtgcttctcctgtcccttgtacttaacagaaatcacggg |
238 |
Q |
| |
|
|| ||||||||| ||| |||||||| | || ||||||||||||||||| |||||||| | ||||||| | |||||||| |||||| |||| ||| |
|
|
| T |
8640320 |
atttctctgcaacctctcgcatcttcgaaaggatcatagatgatatttcctcggcacaaaaacgcttctcttcacccttgtatttaacaataatcgtggg |
8640221 |
T |
|
| Q |
239 |
tttgtcattcaatccggaaatgaccttgaacggccacaacttcat |
283 |
Q |
| |
|
||||||||||| || |||||||||||| |||||||||||||| |
|
|
| T |
8640220 |
tttgtcattcacccc---aatgaccttgaatggccacaacttcat |
8640179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 8570567 - 8570756
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
|||| ||||| ||||||||||||||| ||| |||| || |||||||| |||| |||||| ||||||| | || || ||||||| |||||||| || |
|
|
| T |
8570567 |
ctgccgcagtcggttcattgattatccgcattacattgagaccagcaatttcacctgcatctttagtggctcttcgttgtgaatcattaaaataagcagg |
8570666 |
T |
|
| Q |
101 |
cacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttc |
190 |
Q |
| |
|
||||||| ||||||||||| |||||| | | |||||||| ||||||||||| |||||||||| ||||||| ||||||||||||||| |
|
|
| T |
8570667 |
tacagtaatcactgcattcttaacaggagactccaaaaatgcttctgcaatctctcgcatctttgagagaatcacagatgatatttcttc |
8570756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 8576582 - 8576771
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
|||| ||||| |||||||||||||||| ||| |||| || |||||||| ||||| |||||| ||||||| | || || ||||||| |||||||| || |
|
|
| T |
8576582 |
ctgccgcagtcggttcattgattatctgcatgacattgagaccagcaattgcacctgcatctttagtggctcttcgttgggaatcattaaaataagcagg |
8576681 |
T |
|
| Q |
101 |
cacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttc |
190 |
Q |
| |
|
||||| || ||||||||||| ||||| |||| ||| | |||||||||||| |||||||||| ||||||| ||||||||||||||| |
|
|
| T |
8576682 |
cacagaaatcactgcattcttaacaggtgtctgcagaaaagcctctgcaatctctcgcatctttgagagaatcacagatgatatttcttc |
8576771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 8671542 - 8671265
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
|||||||||| ||||||||||||||| || |||| ||| |||||||| | ||||||||| | ||||| | |||||| |||||||||| ||||| || |
|
|
| T |
8671542 |
ctgcagcagtaggttcattgattatccgaatgacattaagtccagcaatagtaccagcatcaatggtggccgttcgctgagaatcattgaagtaagctgg |
8671443 |
T |
|
| Q |
101 |
cacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacatagg |
200 |
Q |
| |
|
||| |||||||| ||||||||||| || | | || | ||| ||| |||| ||| ||||||||||| || | |||||| |||||||| || ||||| | |
|
|
| T |
8671442 |
cacggtaacaacggcattcttgaccggtgactccagatatgcctccgcaacctctcgcatctttgtaagcaccatagaagatatttcctcagcacaaaat |
8671343 |
T |
|
| Q |
201 |
tgcttctcctgtcccttgtacttaacagaaatcacgggtttgtcattcaatccggaaatgaccttgaacggccacaac |
278 |
Q |
| |
|
|||||||| | || | |||||| |||| ||||| ||||||||||| | || ||||| |||||||| ||||||||| |
|
|
| T |
8671342 |
tgcttctctagaccttcgtacttgacagtaatcataggtttgtcattaacaccagaaataaccttgaatggccacaac |
8671265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 187
Target Start/End: Complemental strand, 29577579 - 29577395
Alignment:
| Q |
3 |
gcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccggca |
102 |
Q |
| |
|
|||||||||||||||||||||||| ||| |||| || |||||||| || |||||| |||||||| |||||| |||||||||||||||| |||| |
|
|
| T |
29577579 |
gcagcagttggttcattgattatccgcattacattgaggccagcaataatgccggcatctttggtggcttttcgctgagaatcattgaaataagctggca |
29577480 |
T |
|
| Q |
103 |
cagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttc |
187 |
Q |
| |
|
| || | ||||||||||| || || || | ||||||| ||||||||||||| ||||||||| || |||||||| |||||||| |
|
|
| T |
29577479 |
ctgtgatcactgcattctttacgggtaactccaaaaatttctctgcaatctcctgcatctttgagaggatcatagacgatatttc |
29577395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 8581956 - 8582145
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
|||| ||||| ||||||||||||||| ||| |||| || || ||||| |||| |||||| ||||||| | || || ||||||| |||||||| || |
|
|
| T |
8581956 |
ctgccgcagtcggttcattgattatccgcattacattgagacctgcaatttcacctgcatctttagtggctcttcgttgtgaatcattaaaataagcagg |
8582055 |
T |
|
| Q |
101 |
cacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttc |
190 |
Q |
| |
|
||||||| ||||||||||| ||||| | | |||||||| |||||||||||| ||||||| ||| ||||| | ||||||||||||||| |
|
|
| T |
8582056 |
tacagtaatcactgcattcttaacaggtgactccaaaaatgcctctgcaatctctcgcatctgtgtcagaataacagatgatatttcttc |
8582145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 17260497 - 17260604
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
|||||||| | |||||||| |||| ||||| ||||| ||| |||||||| |||||||||||| |||||||| |||||| |||||||||||||||| || |
|
|
| T |
17260497 |
ctgcagcaataggttcattaattaacttcaaaacataaaggccagcaataacaccagcatctatggtggcttttcgctgagaatcattgaaataagcagg |
17260596 |
T |
|
| Q |
101 |
cacagtaa |
108 |
Q |
| |
|
||||||| |
|
|
| T |
17260597 |
aacagtaa |
17260604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 278
Target Start/End: Original strand, 8545969 - 8546165
Alignment:
| Q |
82 |
aatcattgaaataagccggcacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatga |
181 |
Q |
| |
|
||||||| |||||||| || ||||||| ||||||||||| ||||| | | |||||||| |||||||||||| ||||||| || || |||| |||||| |
|
|
| T |
8545969 |
aatcattaaaataagcaggtacagtaatcactgcattcttaacaggtgactccaaaaatgcctctgcaatctctcgcatctgtgagaggatcacagatga |
8546068 |
T |
|
| Q |
182 |
tatttcttcggcacataggtgcttctcctgtcccttgtacttaacagaaatcacgggtttgtcattcaatccggaaatgaccttgaacggccacaac |
278 |
Q |
| |
|
||||||||| ||| | |||||| |||| |||||||| || ||| ||| ||||||||||| | |||||||||||||| || ||||||||| |
|
|
| T |
8546069 |
tatttcttcagcaacaaagtgcttttcctcacccttgtagttcacaagaattgtcggtttgtcattaacaccggaaatgaccttaaagggccacaac |
8546165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 8559594 - 8559782
Alignment:
| Q |
6 |
gcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccggcacag |
105 |
Q |
| |
|
|||||||||||||||||||||| ||| |||| ||| |||||||| |||| |||||| |||||| | | ||| ||||||| |||||||| || || | |
|
|
| T |
8559594 |
gcagttggttcattgattatctgcattacattaagaccagcaatttcacctgcatctttggtggctcttctttgagaatcattaaaataagcaggtacgg |
8559693 |
T |
|
| Q |
106 |
taacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggca |
194 |
Q |
| |
|
||| || ||||||| || | | | |||||||| ||||||||||| ||||||| ||| |||||||||| |||||||||||||||| |
|
|
| T |
8559694 |
taatcacagcattctcaaccgtcgactccaaaaatgcttctgcaatctctcgcatctgtgtgagaatcatagctgatatttcttcggca |
8559782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 190
Target Start/End: Original strand, 8538294 - 8538481
Alignment:
| Q |
3 |
gcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccggca |
102 |
Q |
| |
|
||||| || ||||||||||||||| ||| |||| || ||||||||| ||||||||||| |||||| | ||||| |||||||||||||||| || | |
|
|
| T |
8538294 |
gcagctgtaggttcattgattatccgcattacattgaggccagcaatgacaccagcatctttggtggctcttcgctgtgaatcattgaaataagcaggta |
8538393 |
T |
|
| Q |
103 |
cagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttc |
190 |
Q |
| |
|
| |||| |||||||| |||||||| | | ||||||| || || | ||| ||||||||||| || | ||||| |||||||||||| |
|
|
| T |
8538394 |
ctgtaatcactgcatttttgacaggtgactccaaaaatacttcagcgaactcccgcatctttgtgaggaccatagctgatatttcttc |
8538481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 8610175 - 8610278
Alignment:
| Q |
3 |
gcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccggca |
102 |
Q |
| |
|
||||| |||||||||||||| ||| || |||| ||| |||| |||| ||||||||||| ||||||||||||||| ||||||| |||||||| |||| |
|
|
| T |
8610175 |
gcagccgttggttcattgataatccggattacattaaggccagaaatgacaccagcatcttttgtggctttccgctgagaatcattaaaataagcaggca |
8610274 |
T |
|
| Q |
103 |
cagt |
106 |
Q |
| |
|
|||| |
|
|
| T |
8610275 |
cagt |
8610278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 15 - 278
Target Start/End: Original strand, 28910852 - 28911115
Alignment:
| Q |
15 |
tcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccggcacagtaacaactg |
114 |
Q |
| |
|
|||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||| || | |||||||||||||| | | || |||||||| || |
|
|
| T |
28910852 |
tcattgattatccgcataacattaagcctgacaatggcaccagcatctatggtggctttcctctaagaatcattgaaataaccagtcaaagtaacaattg |
28910951 |
T |
|
| Q |
115 |
cattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacataggtgcttctcctgtcc |
214 |
Q |
| |
|
|||||||||| || |||| |||||||||| |||||||||| || ||||||| |||| || |||||| ||||| || ||||||| | ||||||||| | |
|
|
| T |
28910952 |
cattcttgacgggcaattccaaaaatgtcactgcaatctcgcgaatctttgagagaaccacagatgagatttcctcagcacataatttcttctcctgatc |
28911051 |
T |
|
| Q |
215 |
cttgtacttaacagaaatcacgggtttgtcattcaatccggaaatgaccttgaacggccacaac |
278 |
Q |
| |
|
||||||||| ||||| |||| ||| |||||||| | |||| |||||||||||||||| ||||| |
|
|
| T |
28911052 |
cttgtacttgacagatatcatggggttgtcattgacaccggcaatgaccttgaacggcgacaac |
28911115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 88; Significance: 2e-42; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 28 - 247
Target Start/End: Original strand, 12234972 - 12235191
Alignment:
| Q |
28 |
tcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccggcacagtaacaactgcattcttgacagg |
127 |
Q |
| |
|
||||||||| || ||||||||| |||||||||||| ||| ||||| || ||| |||||||||||||||| ||||| ||||||||||||||||| || || |
|
|
| T |
12234972 |
tcataacattgaggccagcaatgacaccagcatctatagttgcttttcgttgagaatcattgaaataagcaggcacggtaacaactgcattcttaactgg |
12235071 |
T |
|
| Q |
128 |
aaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacataggtgcttctcctgtcccttgtacttaaca |
227 |
Q |
| |
|
|||||| ||| ||| ||| || || || ||||||||||| || | ||||||||||| |||||||| |||||| |||||||| | ||||||||||| ||| |
|
|
| T |
12235072 |
aaattgtaaatatgcctcagcgatttctcgcatctttgtgagtaccatagatgatacttcttcgggacatagctgcttctctcgacccttgtacttgaca |
12235171 |
T |
|
| Q |
228 |
gaaatcacgggtttgtcatt |
247 |
Q |
| |
|
||||| |||||||||||| |
|
|
| T |
12235172 |
ataatcatgggtttgtcatt |
12235191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 16657429 - 16657153
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
|||||||||| ||||||||||| || || |||| ||| ||||| |||||||||||||||| |||||||| ||||| |||||||||| ||||| || |
|
|
| T |
16657429 |
ctgcagcagtaggttcattgataattcgaatgacattaaggccagcgatggcaccagcatctatggtggcttttcgctgcgaatcattgaagtaagctgg |
16657330 |
T |
|
| Q |
101 |
cacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacatagg |
200 |
Q |
| |
|
|||||||||||| |||||||||||||| | | || ||||| ||| |||| || ||||||||||| || ||||||||||||||||| || ||||| | |
|
|
| T |
16657329 |
cacagtaacaacagcattcttgacaggcgactccataaatgcctcagcaacttctcgcatctttgtaaggatcatagatgatatttcctcagcacaaaat |
16657230 |
T |
|
| Q |
201 |
tgcttctcctgtcccttgtacttaacagaaatcacgggtttgtcattcaatccggaaatgaccttgaacggccacaa |
277 |
Q |
| |
|
|| |||| || ||||| |||| || || ||||| ||||||||||||| ||||| |||||||||||| |||||||| |
|
|
| T |
16657229 |
tggctctcttgacccttatactgaagagtaatcattggtttgtcattcactccggcaatgaccttgaatggccacaa |
16657153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 12245318 - 12245045
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
|||||||||| |||||||| |||| | ||||||||| || |||||||| | |||||||||| || ||||| |||||| ||||| | |||||||| || |
|
|
| T |
12245318 |
ctgcagcagtgggttcattcattaccctcataacattgagaccagcaattgagccagcatctatcgttgcttttcgctgagaatcactaaaataagcagg |
12245219 |
T |
|
| Q |
101 |
cacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacatagg |
200 |
Q |
| |
|
||||||||||| |||||||| || || ||| ||| ||| ||| ||||| || |||||||||||||| | ||||||||||| |||||| |||||||| |
|
|
| T |
12245218 |
tacagtaacaacagcattctttaccggtgattctaaatatgcctcagcaatttctcgcatctttgttagtaccatagatgatacttcttcagcacatagc |
12245119 |
T |
|
| Q |
201 |
tgcttctcctgtcccttgtacttaacagaaatcacgggtttgtcattcaatccggaaatgaccttgaacggcca |
274 |
Q |
| |
|
||||||||||| || ||||| ||||||| ||| | ||||||||||| | || | | |||||||||||||||| |
|
|
| T |
12245118 |
tgcttctcctggcctttgtagttaacagtaattattggtttgtcattgacaccagcagtgaccttgaacggcca |
12245045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 16661904 - 16661627
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
|||| ||||| ||||||||||||||| ||| ||| | ||| |||||||||||||||||||| | |||||||| |||||| |||| || |||||||| || |
|
|
| T |
16661904 |
ctgctgcagtgggttcattgattatcctcacaacgttaaggccagcaatggcaccagcatccatggtggcttttcgctgagaatcgttaaaataagcagg |
16661805 |
T |
|
| Q |
101 |
cacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacatagg |
200 |
Q |
| |
|
||||| ||||||||||| || || || ||| |||| | | |||||||| ||| ||| ||||| || | |||||||| ||||| |||||||| ||| |
|
|
| T |
16661804 |
aacagtgacaactgcatttttaaccggtgattccaaataagcctctgcaacctccttcatgtttgtgaggacaatagatgagatttcctcggcacaaagg |
16661705 |
T |
|
| Q |
201 |
tgcttctcctgtcccttgtacttaacagaaatcacgggtttgtcattcaatccggaaatgaccttgaacggccacaac |
278 |
Q |
| |
|
|||||||||| ||||||||||||||| |||| ||||||||||| | || | ||| |||||||||||||||||| |
|
|
| T |
16661704 |
agcttctcctgacccttgtacttaacactaatcgtaggtttgtcattaacaccagcaataaccttgaacggccacaac |
16661627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 247
Target Start/End: Original strand, 11999651 - 11999896
Alignment:
| Q |
2 |
tgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccggc |
101 |
Q |
| |
|
||||||||| |||||||| |||| | | ||||||| | |||||||| ||||| ||||||| ||||||||| || ||| ||||| | |||||||| || |
|
|
| T |
11999651 |
tgcagcagtgggttcattcattacccttataacattgatgccagcaattgcaccggcatctatagtggcttttcgttgagaatcactaaaataagctggt |
11999750 |
T |
|
| Q |
102 |
acagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacataggt |
201 |
Q |
| |
|
||||||||||| ||||||| || || ||| ||| ||| ||| ||||| || |||||||| ||||| | ||||||||||| |||||| |||||||| | |
|
|
| T |
11999751 |
acagtaacaacaacattctttaccggtgattctaaatatgcctcagcaatttctcgcatcttcgttagtaccatagatgatacttcttcagcacatagct |
11999850 |
T |
|
| Q |
202 |
gcttctcctgtcccttgtacttaacagaaatcacgggtttgtcatt |
247 |
Q |
| |
|
|||||||||| || ||||||||||||| ||| | ||||||||||| |
|
|
| T |
11999851 |
gcttctcctggcctttgtacttaacagtaattattggtttgtcatt |
11999896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 7542482 - 7542728
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
|||| ||||| |||||||| ||| | ||||||||| || |||||||||||||| ||||||| ||||||||| || ||| ||||||| |||||||| || |
|
|
| T |
7542482 |
ctgcggcagtaggttcattcattgccctcataacattgaggccagcaatggcacccgcatctatagtggcttttcgttgagaatcattaaaataagcagg |
7542581 |
T |
|
| Q |
101 |
cacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacatagg |
200 |
Q |
| |
|
|||||||||||||||||| | |||| || ||| | | ||| ||||| || ||||||||||| || | ||||||||||| ||||| ||| || |
|
|
| T |
7542582 |
tacagtaacaactgcattcgtcacagttgtttctaaatacgactcagcaatttctcgcatctttgtgagtaccatagatgatacctcttcagcatggagt |
7542681 |
T |
|
| Q |
201 |
tgcttctcctgtcccttgtacttaacagaaatcacgggtttgtcatt |
247 |
Q |
| |
|
|| |||||||| ||||||||||||| | ||||| |||| ||||||| |
|
|
| T |
7542682 |
tgtttctcctgatccttgtacttaacggtaatcatgggtctgtcatt |
7542728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 14703664 - 14703909
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
||||||| || |||||||| |||| | ||||||||| || || ||||| |||||||||| | ||||||||| | ||| ||||| | |||||||| || |
|
|
| T |
14703664 |
ctgcagctgtaggttcattcattaccctcataacattgaggccggcaataacaccagcatccatagtggcttttctttgagaatcactaaaataagcagg |
14703763 |
T |
|
| Q |
101 |
cacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacatagg |
200 |
Q |
| |
|
||| ||||||||||||||||| |||| | | ||| ||||||| ||||| || |||||||| || | ||||||||||| |||||||||| | || |
|
|
| T |
14703764 |
caccgtaacaactgcattcttaacagttgactctaaatatgtctcagcaatttctcgcatcttcaccagtaccatagatgatacttcttcggcatagagc |
14703863 |
T |
|
| Q |
201 |
tgcttctcctgtcccttgtacttaacagaaatcacgggtttgtcat |
246 |
Q |
| |
|
| ||||||||| ||||||||||||| | ||||| ||||||||||| |
|
|
| T |
14703864 |
ttcttctcctgatccttgtacttaaccgtaatcatgggtttgtcat |
14703909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 187
Target Start/End: Original strand, 43625713 - 43625855
Alignment:
| Q |
46 |
caatggcaccagcatctacagtggctttccgctgataatcattgaaataagccggcacagtaacaactgcattcttgac---aggaaattgcaaaaatgt |
142 |
Q |
| |
|
||||| ||||| |||||| |||||||| |||||| |||||||||| ||||| ||||| ||||||||||||||||| || ||| ||| |||||| | |
|
|
| T |
43625713 |
caatgacaccaacatctatggtggcttttcgctgagaatcattgaagtaagcaggcacggtaacaactgcattctttacggggggacatt--aaaaattt |
43625810 |
T |
|
| Q |
143 |
ctctgcaatctcacgcatctttgttagaatcatagatgatatttc |
187 |
Q |
| |
|
|||||||| ||| ||||||||||| || |||||||| |||||||| |
|
|
| T |
43625811 |
ctctgcaacctctcgcatctttgtgaggatcatagacgatatttc |
43625855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 12258493 - 12258247
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
|||||||||| |||||||| | |||||||||||||| || ||| |||| ||| |||||| ||||||||||| || ||||| | ||||| || || |
|
|
| T |
12258493 |
ctgcagcagtaggttcatttaatatcttcataacattcaggccaacaatattacccacatctatagtggctttcctttgtgaatcactaaaatatgcagg |
12258394 |
T |
|
| Q |
101 |
cacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacatagg |
200 |
Q |
| |
|
||||||||||||||||||||| || || ||| ||| ||| ||| ||||| || ||||||||||| | | || |||||||| ||| |||||||| || |
|
|
| T |
12258393 |
cacagtaacaactgcattcttaacgggtgattctaaatatgcctcagcaatttctcgcatctttgtcaataccacagatgatacttcctcggcacaaagc |
12258294 |
T |
|
| Q |
201 |
tgcttctcctgtcccttgtacttaacagaaatcacgggtttgtcatt |
247 |
Q |
| |
|
|||||||| || ||||||||| || | ||||| ||||||| |||| |
|
|
| T |
12258293 |
tgcttctcttgattcttgtactttaccgtaatcatgggtttgccatt |
12258247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 84; Significance: 6e-40; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 12 - 280
Target Start/End: Original strand, 15595308 - 15595571
Alignment:
| Q |
12 |
ggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccggcacagtaacaa |
111 |
Q |
| |
|
||||||||||||| | ||||||| ||| |||||||||||||| ||||||| ||||||||| || ||| ||||||||| |||||| ||||| ||||||| |
|
|
| T |
15595308 |
ggttcattgattacccgtataacattaaggccagcaatggcacctgcatctatagtggcttttcgttgagaatcattgagataagcaggcacggtaacaa |
15595407 |
T |
|
| Q |
112 |
ctgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacataggtgcttctcctg |
211 |
Q |
| |
|
||||||| || || ||| | | |||||| ||||||||| ||| ||||||||| | ||||||||||| |||||||| || ||||| | | |||| || || |
|
|
| T |
15595408 |
ctgcattgtttacgggagact--aaaaatttctctgcaacctctcgcatctttttgagaatcatagacgatatttcctcagcacaaaagcgcttttcttg |
15595505 |
T |
|
| Q |
212 |
tcccttgtacttaacagaaatcacgggtttgtcattcaatccggaaatgaccttgaacggccacaactt |
280 |
Q |
| |
|
|||||||| |||||| ||||| |||||||||||||| || |||||||||||| ||||||||||| |
|
|
| T |
15595506 |
acccttgtatttaacaataatcatgggtttgtcattcacacc---aatgaccttgaatggccacaactt |
15595571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 34466705 - 34466459
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
|||||||||| |||||||||||||| | || ||||| ||| |||||||| | ||||||||| ||||| ||||| |||||| ||||||| |||||||| || |
|
|
| T |
34466705 |
ctgcagcagtgggttcattgattatttgcaaaacattaaggccagcaatagtaccagcatccacagtagcttttcgctgagaatcattaaaataagcagg |
34466606 |
T |
|
| Q |
101 |
cacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacatagg |
200 |
Q |
| |
|
||| || | |||||||||||| | || ||| |||| || ||||||| | || |||||||||| || ||||||||||| ||||| || ||||||||| |
|
|
| T |
34466605 |
cacggtgataactgcattcttaattggtgattccaaatattcctctgcagtatcccgcatctttgaaaggatcatagatgagatttcctcagcacatagg |
34466506 |
T |
|
| Q |
201 |
tgcttctcctgtcccttgtacttaacagaaatcacgggtttgtcatt |
247 |
Q |
| |
|
||||||||||| ||||| ||||||| ||||||| || |||||||| |
|
|
| T |
34466505 |
tgcttctcctgacccttatacttaagggaaatcattggcttgtcatt |
34466459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 4678470 - 4678345
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
||||| |||| ||||| |||||||| | || |||| ||| |||||||||||||||||||||| || ||||| || ||| |||||||||| || || || |
|
|
| T |
4678470 |
ctgcaacagtaggttcgttgattatttgaatgacattaagtccagcaatggcaccagcatctatggtagcttttcgttgagaatcattgaagtatgcagg |
4678371 |
T |
|
| Q |
101 |
cacagtaacaactgcattcttgacag |
126 |
Q |
| |
|
|||||||||||| ||||||| |||| |
|
|
| T |
4678370 |
cacagtaacaacgacattcttcacag |
4678345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 9335803 - 9335526
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
|||||||||| ||||||||||||||| || |||| ||| |||||||| | ||||||||||| ||||| || |||||| |||||||||| ||||| || |
|
|
| T |
9335803 |
ctgcagcagtaggttcattgattatccgaatgacattaaggccagcaatagtaccagcatctatggtggcctttcgctgagaatcattgaagtaagctgg |
9335704 |
T |
|
| Q |
101 |
cacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacatagg |
200 |
Q |
| |
|
||| |||||||| ||||||||||| || | |||| ||| ||| |||| ||| | ||||||||| || | |||||| |||||||| || ||||| | | |
|
|
| T |
9335703 |
cacggtaacaacggcattcttgaccggcgaccccaaatatgcctccgcaacctctctcatctttgtaagcaacatagaagatatttcctcagcacaaaag |
9335604 |
T |
|
| Q |
201 |
tgcttctcctgtcccttgtacttaacagaaatcacgggtttgtcattcaatccggaaatgaccttgaacggccacaac |
278 |
Q |
| |
|
|||||||| || |||||||| ||||||| ||||| ||||||||||| | || ||||| |||||||| ||||||||| |
|
|
| T |
9335603 |
tgcttctcttgacccttgtagttaacagtaatcataggtttgtcattaacaccagaaataaccttgaatggccacaac |
9335526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 30775508 - 30775785
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
|||| ||||| || ||||| ||||| ||||||||| ||| |||||||||||||||||||| | ||||||||| ||||| ||||||||||||||| || |
|
|
| T |
30775508 |
ctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtgcatcattgaaataagcagg |
30775607 |
T |
|
| Q |
101 |
cacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacatagg |
200 |
Q |
| |
|
|||||| | ||||||||| || || || ||| |||| | ||||||||||||| | ||| ||||| || | || ||||| ||||| |||||||| ||| |
|
|
| T |
30775608 |
cacagtgataactgcatttttaactggggattccaaatacatctctgcaatctctctcatatttgtgaggactattgatgaaatttcctcggcacagagg |
30775707 |
T |
|
| Q |
201 |
tgcttctcctgtcccttgtacttaacagaaatcacgggtttgtcattcaatccggaaatgaccttgaacggccacaac |
278 |
Q |
| |
|
| |||||||| |||||| |||||| ||||||| |||||||||||| | || |||| |||||||| ||||||||| |
|
|
| T |
30775708 |
agtttctcctggcccttgaacttaagggaaatcatgggtttgtcattaacaccagaaacaaccttgaatggccacaac |
30775785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 274
Target Start/End: Original strand, 35132704 - 35132975
Alignment:
| Q |
1 |
ctgcagcagttggttcattgattatcttcataacatcaagcccagcaatggcaccagcatctacagtggctttccgctgataatcattgaaataagccgg |
100 |
Q |
| |
|
|||| ||||| |||||||| |||| ||||||||| | |||||||| ||||||||||||| ||||||||| || ||| ||||| | |||||||| || |
|
|
| T |
35132704 |
ctgcggcagtaggttcattcattactctcataacattgggaccagcaatagcaccagcatctatagtggcttttcgttgagaatcactaaaataagcagg |
35132803 |
T |
|
| Q |
101 |
cacagtaacaactgcattcttgacaggaaattgcaaaaatgtctctgcaatctcacgcatctttgttagaatcatagatgatatttcttcggcacatagg |
200 |
Q |
| |
|
||||||||||||||||||||| |||| ||| ||| ||| ||||||| || ||||||||||| || | ||| ||||||| |||||| ||| | || |
|
|
| T |
35132804 |
cacagtaacaactgcattcttaacagttgattctaaatatg--cctgcaatttctcgcatctttgtgagtaccatggatgatacttcttccgcatagagt |
35132901 |
T |
|
| Q |
201 |
tgcttctcctgtcccttgtacttaacagaaatcacgggtttgtcattcaatccggaaatgaccttgaacggcca |
274 |
Q |
| |
|
||||| |||| ||||||||||||| | ||||| |||||||||||| | |||| | |||||||||| ||||| |
|
|
| T |
35132902 |
tgcttttcctcatccttgtacttaaccgtaatcatgggtttgtcatttacaccggcagtgaccttgaatggcca |
35132975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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