View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2673_low_32 (Length: 267)

Name: NF2673_low_32
Description: NF2673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2673_low_32
NF2673_low_32
[»] chr4 (8 HSPs)
chr4 (20-267)||(15349253-15349500)
chr4 (20-267)||(14687181-14687434)
chr4 (20-264)||(42711184-42711434)
chr4 (21-157)||(45240267-45240404)
chr4 (21-157)||(11498023-11498159)
chr4 (21-144)||(18290701-18290824)
chr4 (38-147)||(11918125-11918233)
chr4 (21-158)||(10629417-10629551)
[»] chr7 (13 HSPs)
chr7 (19-267)||(540167-540415)
chr7 (20-267)||(16327176-16327429)
chr7 (20-267)||(9581454-9581707)
chr7 (20-267)||(9729306-9729559)
chr7 (20-267)||(4311280-4311532)
chr7 (20-267)||(8783498-8783751)
chr7 (105-267)||(14223144-14223312)
chr7 (21-158)||(23513736-23513873)
chr7 (21-148)||(4462117-4462244)
chr7 (21-158)||(13741088-13741225)
chr7 (21-154)||(5395811-5395944)
chr7 (21-158)||(12565670-12565807)
chr7 (21-161)||(10439748-10439888)
[»] chr1 (3 HSPs)
chr1 (19-267)||(27045425-27045673)
chr1 (60-152)||(22626475-22626567)
chr1 (21-157)||(21785853-21785986)
[»] chr6 (9 HSPs)
chr6 (19-267)||(22062919-22063167)
chr6 (86-267)||(19587034-19587221)
chr6 (21-158)||(18188979-18189116)
chr6 (21-174)||(23519161-23519314)
chr6 (21-147)||(17818194-17818320)
chr6 (19-158)||(18852688-18852823)
chr6 (20-65)||(29685293-29685338)
chr6 (20-68)||(19586983-19587031)
chr6 (29-62)||(25966401-25966434)
[»] chr3 (11 HSPs)
chr3 (19-267)||(6813420-6813668)
chr3 (20-267)||(12777913-12778166)
chr3 (20-267)||(15024255-15024508)
chr3 (21-157)||(20562017-20562153)
chr3 (21-157)||(20564325-20564461)
chr3 (21-157)||(20559709-20559845)
chr3 (21-158)||(13090217-13090351)
chr3 (21-158)||(9362367-9362501)
chr3 (21-158)||(13096380-13096514)
chr3 (20-66)||(3246922-3246968)
chr3 (21-140)||(20153465-20153581)
[»] scaffold0090 (1 HSPs)
scaffold0090 (20-267)||(29313-29566)
[»] chr8 (4 HSPs)
chr8 (20-267)||(20000853-20001103)
chr8 (21-157)||(20040479-20040615)
chr8 (21-161)||(21855186-21855323)
chr8 (21-157)||(17619412-17619545)
[»] scaffold0035 (1 HSPs)
scaffold0035 (20-267)||(51962-52215)
[»] chr5 (7 HSPs)
chr5 (20-267)||(23712116-23712369)
chr5 (21-152)||(20446255-20446386)
chr5 (21-158)||(21282320-21282458)
chr5 (21-144)||(18487473-18487596)
chr5 (21-147)||(23602050-23602173)
chr5 (21-158)||(24939200-24939334)
chr5 (21-141)||(24218516-24218633)
[»] scaffold0485 (1 HSPs)
scaffold0485 (20-267)||(11313-11567)
[»] chr2 (2 HSPs)
chr2 (21-158)||(24500997-24501134)
chr2 (21-166)||(25339516-25339661)
[»] scaffold0222 (1 HSPs)
scaffold0222 (21-144)||(18509-18632)
[»] scaffold0220 (1 HSPs)
scaffold0220 (39-158)||(11741-11860)
[»] scaffold0566 (1 HSPs)
scaffold0566 (21-157)||(1275-1411)
[»] scaffold0026 (1 HSPs)
scaffold0026 (60-158)||(17034-17132)
[»] scaffold0113 (1 HSPs)
scaffold0113 (21-158)||(38043-38177)
[»] scaffold0012 (2 HSPs)
scaffold0012 (21-147)||(12854-12977)
scaffold0012 (21-147)||(8745-8868)
[»] scaffold1184 (1 HSPs)
scaffold1184 (28-62)||(537-571)


Alignment Details
Target: chr4 (Bit Score: 236; Significance: 1e-130; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 20 - 267
Target Start/End: Original strand, 15349253 - 15349500
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 119  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15349253 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 15349352  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttga 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15349353 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttga 15349452  T
Q  220 tcccttgattcacaatcaccccaaacttcttagcaataaaagtgatga 267  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||    
T  15349453 tcccttgattcatactcaccccaaacttcttagcaataaaagtgatga 15349500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 20 - 267
Target Start/End: Original strand, 14687181 - 14687434
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 119  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  14687181 ttgtacctgtgggttagtaccaacataaagcaaattttccaccgcctccggattagtaatgtccgaattaggtagcataatcaaacaattagctctaata 14687280  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||      |||||| |||||||||||||||||||| |||||||    
T  14687281 attctccatttatattggtaattgtgagtagggtcatgggttctaaggaatgacaaagtagtgagagtatataagtttagataatagttctcctctatcc 14687380  T
Q  214 tcttgatcccttgattcacaatcaccccaaacttcttagcaataaaagtgatga 267  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14687381 tcttgatcccttgattcacactcaccccaaacttcttagcaataaaagtgatga 14687434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 20 - 264
Target Start/End: Original strand, 42711184 - 42711434
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 119  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  42711184 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaata 42711283  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    ||||||||||||||||||||||| |||||| ||||||||||| ||||||| ||||||||      |||||| |||||| ||||||| || ||||||||||    
T  42711284 attctccattcatattggtaattatgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcc 42711383  T
Q  214 tcttgatcccttgattcacaatcaccccaaacttcttagcaataaaagtga 264  Q
    ||||||||| |||||||||| |||||| |||| ||||||||||||||||||    
T  42711384 tcttgatcctttgattcacactcaccctaaacctcttagcaataaaagtga 42711434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 45240267 - 45240404
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaa-ttagctctaatg 119  Q
    ||||||||||||||||| |||||||||| ||| ||||  |||||||||||||||||||| | |||||| |||||||||||||| ||| |||||  || ||    
T  45240267 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatattcgaatttggtagaataatcaagcaatttagcgttattg 45240366  T
Q  120 attctccattcatattggtaattgtgagtagggtcatg 157  Q
    | |||||| ||||||||||||||||||| |||| ||||    
T  45240367 actctccactcatattggtaattgtgagaagggccatg 45240404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 11498023 - 11498159
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||||||| ||| ||||  |||||||||||||||||||| |  |||||||||||||||||||| |||||| |   | |||    
T  11498023 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatatttgaattaggtagaataatcaagcaattaacataattga 11498122  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatg 157  Q
     |||||| |||||||||||||||| || |||||||||    
T  11498123 ctctccactcatattggtaattgttagaagggtcatg 11498159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 18290824 - 18290701
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||||||| ||| ||||  | |||||||||||||||||| || ||||||||||||||||||||  |||| ||  || |||    
T  18290824 tgtacctgtgggttagtgccaacataaaccaagttttctatcacctccggattagtaatatctgaattaggtagaataatcaataaatttgcattattga 18290725  T
Q  121 ttctccattcatattggtaattgt 144  Q
     | |||| ||||||||||||||||    
T  18290724 atttccactcatattggtaattgt 18290701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 38 - 147
Target Start/End: Original strand, 11918125 - 11918233
Alignment:
Q  38 accaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 137  Q
    ||||||||||| ||| |||| |||||||| ||| ||||| ||||||| ||||||||||||||||||| ||||||| ||| ||| | |||| |||||||||    
T  11918125 accaacataaaacaatttttccaccaccttcgggttagttatgtccggattaggtagaataatcaaa-aattagccctattgactttccactcatattgg 11918223  T
Q  138 taattgtgag 147  Q
    ||||||||||    
T  11918224 taattgtgag 11918233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 10629551 - 10629417
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| ||||||||||   | ||||  ||| ||| |||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  10629551 tgtacctgtgggttagtgccaacataaa---agttttctaccgccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 10629455  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgg 158  Q
     |||||| ||||||||| ||||||||| |||| |||||    
T  10629454 ctctccactcatattgggaattgtgagaagggccatgg 10629417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 233; Significance: 1e-129; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 19 - 267
Target Start/End: Original strand, 540167 - 540415
Alignment:
Q  19 tttgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaat 118  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  540167 tttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctttaat 540266  T
Q  119 gattctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttg 218  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  540267 gattctcctttcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttg 540366  T
Q  219 atcccttgattcacaatcaccccaaacttcttagcaataaaagtgatga 267  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  540367 atcccttgattcacactcaccccaaacttcttagcaataaaagtgatga 540415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 20 - 267
Target Start/End: Original strand, 16327176 - 16327429
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 119  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  16327176 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaatagtcaaacaattagctctaata 16327275  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||      |||||| ||||||||||||||||| || |||||||    
T  16327276 attctccattcatattggtaattgtgagtagggtcatgggttataaggaaggacaaagtagtaagagtatataagtttagataatagttttcctctatcc 16327375  T
Q  214 tcttgatcccttgattcacaatcaccccaaacttcttagcaataaaagtgatga 267  Q
    |||||||||||||||||||| |||||| |||| |||||||||||||||||||||    
T  16327376 tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatga 16327429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 20 - 267
Target Start/End: Complemental strand, 9581707 - 9581454
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 119  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||     
T  9581707 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccagattagtaatgtccgaattaggtagaataatcaaacaattagttctaata 9581608  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    || |||||||||||||| |||||||||||| ||||||||||| ||||||| ||||||||      |||||| |||||| ||||||| || ||||||||||    
T  9581607 atcctccattcatattgataattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcc 9581508  T
Q  214 tcttgatcccttgattcacaatcaccccaaacttcttagcaataaaagtgatga 267  Q
    |||||||||||||||||||| |||||| |||| |||||||||||||||||||||    
T  9581507 tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatga 9581454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 20 - 267
Target Start/End: Complemental strand, 9729559 - 9729306
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 119  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||     
T  9729559 ttgtacctgtggattagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagttctaata 9729460  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    || |||||||||||||| |||||||||||| ||||||||||| ||||||| ||||||||      |||||| |||||| ||||||| || ||||||||||    
T  9729459 atcctccattcatattgataattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcc 9729360  T
Q  214 tcttgatcccttgattcacaatcaccccaaacttcttagcaataaaagtgatga 267  Q
    |||||||||||||||||||| |||||| |||| |||||||||||||||||||||    
T  9729359 tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatga 9729306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 20 - 267
Target Start/End: Complemental strand, 4311532 - 4311280
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 119  Q
    |||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4311532 ttgtacatgtgggttagtaccaacgtaaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaata 4311433  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||| || ||||||||      |||||| |||| ||||||||||||| | |||||||    
T  4311432 attctccattcatattggtaattgtgagtagggccatgggttctaagaaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcc 4311333  T
Q  214 tcttgatcccttgattcacaatcaccccaaacttcttagcaataaaagtgatga 267  Q
    |||||||| ||||||||||| || ||||||||||| ||| |||||| |||||||    
T  4311332 tcttgatctcttgattcacactc-ccccaaacttcctagaaataaaggtgatga 4311280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 20 - 267
Target Start/End: Original strand, 8783498 - 8783751
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 119  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||| ||||| || ||||     
T  8783498 ttgtacatgtgggttagtaccaacataaagcaaattttccaccacctccggattagttatgtccgaattagggagaataatcaaaaaattatctgtaata 8783597  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    ||||||| |||||||| |||||||||||||||| |||||||| ||||||| | ||||||      |||||| |||| ||||||||||||| | |||||||    
T  8783598 attctcctttcatatttgtaattgtgagtagggccatgggttgtaaggaagggcaaagtagtgagagtatataagtctagataatagttcccctctatcc 8783697  T
Q  214 tcttgatcccttgattcacaatcaccccaaacttcttagcaataaaagtgatga 267  Q
     |||||||| |||||||||| |||||||||||||| |||||||||| |||||||    
T  8783698 ccttgatccattgattcacactcaccccaaacttcctagcaataaaggtgatga 8783751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 105 - 267
Target Start/End: Original strand, 14223144 - 14223312
Alignment:
Q  105 caattagctctaatgattctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataat 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||      |||||| |||||||||||||    
T  14223144 caattagctctaatgattctccattcatattggtaattgtgagtagggtcatgggctttaaggaatgacaaagtagtgagagtatataagtttagataat 14223243  T
Q  199 agttctcatctatcctcttgatcccttgattcacaatcaccccaaacttcttagcaataaaagtgatga 267  Q
    ||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14223244 agttctcctctttcctcttgatcccttgattcacactcaccccaaacttcttagcaataaaagtgatga 14223312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 23513873 - 23513736
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttc-accacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 119  Q
    ||||||||||||||||| |||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||  || ||    
T  23513873 tgtacctgtgggttagtgccaacataaa-caaagttttctaccacctccggattagtaatgtccgaattaggtagaataatcaagtaattagcattattg 23513775  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgg 158  Q
    | |||||| |||||| |||||||||||| |||| |||||    
T  23513774 actctccactcatataggtaattgtgagaagggccatgg 23513736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 4462117 - 4462244
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    |||||| ||||||||||||||| |||||||||||||| |||||||| ||| ||||| |||  || ||||||||||||||||||||||| |||||||||||    
T  4462117 tgtaccagtgggttagtaccaatataaagcaaattttccaccaccttcgggttagttatgaacggattaggtagaataatcaaacaatgagctctaatga 4462216  T
Q  121 ttctccattcatattggtaattgtgagt 148  Q
    || || | |||||||||| |||||||||    
T  4462217 ttttctaatcatattggtcattgtgagt 4462244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 13741225 - 13741088
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttc-accacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 119  Q
    ||||||||||| ||||| |||||||||| || | ||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||| |  || ||    
T  13741225 tgtacctgtggattagtgccaacataaa-catagttttctaccacctccgaattagtaatgtccgaattaggtagaataatcaagcaattatcattattg 13741127  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgg 158  Q
    | |||||| ||||||||||||||||||| |||| |||||    
T  13741126 actctccactcatattggtaattgtgagaagggccatgg 13741088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 5395944 - 5395811
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||||||| ||| ||||  |||||||||||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  5395944 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 5395845  T
Q  121 ttctccattcatattggtaattgtgagtagggtc 154  Q
      ||||| |||| ||||||||||| || ||||||    
T  5395844 cgctccactcattttggtaattgttagaagggtc 5395811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 12565807 - 12565670
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    |||||| ||||||||||||||||||||| ||| ||||  |||||||||| ||||||||| || |||||||||  |||||||||  |||||||  || |||    
T  12565807 tgtaccggtgggttagtaccaacataaaccaagttttctaccacctccgaattagtaatatctgaattaggttaaataatcaagaaattagcattattga 12565708  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgg 158  Q
     |||||| |||||||||||||||| || |||| |||||    
T  12565707 ctctccactcatattggtaattgttagaagggccatgg 12565670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 10439748 - 10439888
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||||||| ||| ||||  ||||||| | | |||||||| || ||||||||||||||||||||  ||||| |  || |||    
T  10439748 tgtacctgtgggttagtgccaacataaaccaagttttctaccaccttcagcttagtaatatctgaattaggtagaataatcaagaaattatcattattga 10439847  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgggtt 161  Q
     |||||| ||||||||||||||||||| ||||  |||||||    
T  10439848 ctctccactcatattggtaattgtgagaagggctatgggtt 10439888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 233; Significance: 1e-129; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 19 - 267
Target Start/End: Complemental strand, 27045673 - 27045425
Alignment:
Q  19 tttgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaat 118  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27045673 tttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaat 27045574  T
Q  119 gattctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttg 218  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27045573 gattctccatgcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttg 27045474  T
Q  219 atcccttgattcacaatcaccccaaacttcttagcaataaaagtgatga 267  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  27045473 atcccttgattcatactcaccccaaacttcttagcaataaaagtgatga 27045425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 60 - 152
Target Start/End: Original strand, 22626475 - 22626567
Alignment:
Q  60 accacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggtaattgtgagtaggg 152  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||  || ||| |||||| ||||||||||||||||||| ||||    
T  22626475 accaccaccggattagtaatatccgaattaggtagaataatcaagcaattagcattattgactctccactcatattggtaattgtgagaaggg 22626567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 21785853 - 21785986
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| ||||||||||   | ||||  ||||||| |||||||||||| || ||||||||||||| ||||||  |||||||  || |||    
T  21785853 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaaaaatcaagaaattagcattattga 21785949  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatg 157  Q
     |||||| |||| |||||| |||| || |||| ||||    
T  21785950 ctctccactcatgttggtacttgttagaagggccatg 21785986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 221; Significance: 1e-121; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 19 - 267
Target Start/End: Original strand, 22062919 - 22063167
Alignment:
Q  19 tttgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaat 118  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22062919 tttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaat 22063018  T
Q  119 gattctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttg 218  Q
    |||||||||| ||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22063019 gattctccatgcatgttggtaattgtgagtagagtcatggtttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttg 22063118  T
Q  219 atcccttgattcacaatcaccccaaacttcttagcaataaaagtgatga 267  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  22063119 atcccttgattcatactcaccccaaacttcttagcaataaaagtgatga 22063167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 86 - 267
Target Start/End: Original strand, 19587034 - 19587221
Alignment:
Q  86 attaggtagaataatcaaacaattagctctaatgattctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------a 179  Q
    ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||| ||||||  |||||||| ||||||| ||||||||      |    
T  19587034 attaggtagaataatcaaacaattagctctaataattctccgtttatattggtaattgtaagtaggtccatgggttctaaggaaggacaaagtagtgaga 19587133  T
Q  180 gtataaaagtttagataatagttctcatctatcctcttgatcccttgattcacaatcaccccaaacttcttagcaataaaagtgatga 267  Q
    ||||| |||| |||||||||||||   ||||||||||||||||||||||||| | |||||||||||||| |||||||||| |||||||    
T  19587134 gtatataagtgtagataatagttcctctctatcctcttgatcccttgattcagactcaccccaaacttcctagcaataaaggtgatga 19587221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 21 - 158
Target Start/End: Original strand, 18188979 - 18189116
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||||||| ||| ||||  |||||||||||||||||| | ||||||||||||||||||||||| ||||||||  || |||    
T  18188979 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtattatccgaattaggtagaataatcaagcaattagcattattga 18189078  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgg 158  Q
     |||||| ||||||||||||||||||| ||||||||||    
T  18189079 ctctccactcatattggtaattgtgagaagggtcatgg 18189116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 174
Target Start/End: Original strand, 23519161 - 23519314
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    |||||| |||||||||| ||||||||||||||||||| ||||| |||||||||||| |||||| ||| |||||||||||||||||||||||| ||| | |    
T  23519161 tgtacccgtgggttagttccaacataaagcaaattttccaccatctccggattagttatgtccaaataaggtagaataatcaaacaattagccctattta 23519260  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgaca 174  Q
     | |||   |||||||||| ||||||| ||||||||||||| ||||||| ||||    
T  23519261 ctttccgcacatattggtagttgtgagaagggtcatgggttataaggaaagaca 23519314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 17818320 - 17818194
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||||||| ||| ||||  ||||||| |||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  17818320 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctacggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 17818221  T
Q  121 ttctccattcatattggtaattgtgag 147  Q
     |||||| |||||||||||||||||||    
T  17818220 ctctccactcatattggtaattgtgag 17818194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 18852823 - 18852688
Alignment:
Q  19 tttgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaat 118  Q
    ||||||||||||||||||| ||||||||||   ||||||  |||| ||||||||||||||| || |||||||||||||||||| || || || |  || |    
T  18852823 tttgtacctgtgggttagtgccaacataaa---aattttctaccatctccggattagtaatatctgaattaggtagaataatc-aagaaataacattatt 18852728  T
Q  119 gattctccattcatattggtaattgtgagtagggtcatgg 158  Q
     | |||||| ||||||||||||||||||| |||| |||||    
T  18852727 tactctccactcatattggtaattgtgagaagggccatgg 18852688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 29685338 - 29685293
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaatttttcaccacc 65  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||    
T  29685338 ttgtacctgtgggttagtactaacataaagcaaattttccaccacc 29685293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 19586983 - 19587031
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaatttttcaccacctcc 68  Q
    |||||||||||||||| |||||||||||| |||||||| ||||||||||    
T  19586983 ttgtacctgtgggttaataccaacataaatcaaattttccaccacctcc 19587031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 25966434 - 25966401
Alignment:
Q  29 tgggttagtaccaacataaagcaaatttttcacc 62  Q
    ||||||||||||||||||||| ||||||||||||    
T  25966434 tgggttagtaccaacataaagtaaatttttcacc 25966401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 221; Significance: 1e-121; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 19 - 267
Target Start/End: Complemental strand, 6813668 - 6813420
Alignment:
Q  19 tttgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaat 118  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6813668 tttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaat 6813569  T
Q  119 gattctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttg 218  Q
    |||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6813568 gattctccatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttg 6813469  T
Q  219 atcccttgattcacaatcaccccaaacttcttagcaataaaagtgatga 267  Q
    ||||||||||||| | ||||| |||||||||||||||||||||||||||    
T  6813468 atcccttgattcatactcacctcaaacttcttagcaataaaagtgatga 6813420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 20 - 267
Target Start/End: Original strand, 12777913 - 12778166
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 119  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||     
T  12777913 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccgaattagtaatgtccgaattaggtagaataatcaaacaattagttctaata 12778012  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||      |||| | |||||| ||||||| || || |||||||    
T  12778013 attctccattcatattgataattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtaaataagtttggataataattttcctctatcc 12778112  T
Q  214 tcttgatcccttgattcacaatcaccccaaacttcttagcaataaaagtgatga 267  Q
    |||||||||||||||||||| |||||| |||| ||||||||||||||| |||||    
T  12778113 tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagggatga 12778166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 20 - 267
Target Start/End: Complemental strand, 15024508 - 15024255
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 119  Q
    |||||| ||||| ||||||||||||||| ||||||||| |||||||||||||||||| ||||| | ||||||||||||||| ||||||||||||||| |     
T  15024508 ttgtacatgtggattagtaccaacataatgcaaattttccaccacctccggattagttatgtctggattaggtagaataataaaacaattagctctatta 15024409  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||      |||||| |||| ||||||||||| | | |||||||    
T  15024408 attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagtacccctctatcc 15024309  T
Q  214 tcttgatcccttgattcacaatcaccccaaacttcttagcaataaaagtgatga 267  Q
    |||||||||||||||||||| |||||||||||||  ||||||||||||||||||    
T  15024308 tcttgatcccttgattcacactcaccccaaactttctagcaataaaagtgatga 15024255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 21 - 157
Target Start/End: Complemental strand, 20562153 - 20562017
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||| ||| | | ||||  |||||||||| ||||||||| || ||||||||||||||||||||  ||||||   || |||    
T  20562153 tgtacctgtgggttagtgccaacacaaacctagttttctaccacctccgaattagtaatatctgaattaggtagaataatcaagaaattagtagtattga 20562054  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatg 157  Q
     |||||| ||||||||||||||||||| |||| ||||    
T  20562053 ctctccactcatattggtaattgtgagaagggccatg 20562017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 21 - 157
Target Start/End: Complemental strand, 20564461 - 20564325
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||| ||| | | ||||  |||||||||| ||||||||| || ||||||||||||||||||||  ||||||   || |||    
T  20564461 tgtacctgtgggttagtgccaacacaaacctagttttctaccacctccgaattagtaatatctgaattaggtagaataatcaagaaattagtagtattga 20564362  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatg 157  Q
     |||||| ||||||||||||||||||| |||| ||||    
T  20564361 ctctccactcatattggtaattgtgagaagggccatg 20564325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 157
Target Start/End: Complemental strand, 20559845 - 20559709
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    |||| |||||||||||| |||||| ||| | | ||||  |||||||||| ||||||||| || ||||||||||||||||||||  ||||||   || |||    
T  20559845 tgtatctgtgggttagtgccaacacaaacctagttttctaccacctccgaattagtaatatctgaattaggtagaataatcaagaaattagtagtattga 20559746  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatg 157  Q
     |||||| ||||||||||||||||||| |||| ||||    
T  20559745 ctctccactcatattggtaattgtgagaagggccatg 20559709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 21 - 158
Target Start/End: Original strand, 13090217 - 13090351
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| ||||||||||   | ||||  ||||||| |||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  13090217 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 13090313  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgg 158  Q
     || ||| ||||||||| ||||||||| |||| |||||    
T  13090314 ctcaccactcatattgggaattgtgagaagggccatgg 13090351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 158
Target Start/End: Original strand, 9362367 - 9362501
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| ||||||||||   | ||||  ||||||| |||||||||||| |  ||||||||||||||||||||  |||||||  || |||    
T  9362367 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatttgaattaggtagaataatcaagaaattagcattattga 9362463  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgg 158  Q
     |||||| |||||||||  |||||||| |||| |||||    
T  9362464 ctctccactcatattggggattgtgagaagggccatgg 9362501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 13096514 - 13096380
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    |||||||||||||||||  |||||||||   | ||||  ||||||| |||||||||||| || ||||||||||||||||||||  ||||||   || |||    
T  13096514 tgtacctgtgggttagtgtcaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagaattattga 13096418  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgg 158  Q
     |||||| |||| |||| ||||||||| |||| |||||    
T  13096417 ctctccactcatgttgggaattgtgagaagggccatgg 13096380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 3246922 - 3246968
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaatttttcaccacct 66  Q
    |||||||||||||||||||| || ||||| |||||||| ||||||||    
T  3246922 ttgtacctgtgggttagtacaaaaataaaacaaattttccaccacct 3246968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 20153581 - 20153465
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttc-accacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 119  Q
    ||||||||| ||||||| |||||||||| |||| ||||| ||||||||| |||||| ||| || |||   ||||||||||||||  |||||||   | ||    
T  20153581 tgtacctgtaggttagtgccaacataaa-caaagttttctaccacctccagattaggaatatctgaa---ggtagaataatcaagaaattagcagcattg 20153486  T
Q  120 attctccattcatattggtaa 140  Q
    | |||||| ||||||||||||    
T  20153485 actctccactcatattggtaa 20153465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 20 - 267
Target Start/End: Complemental strand, 29566 - 29313
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 119  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29566 ttgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcatacaattagctctaatg 29467  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||||||||||    
T  29466 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtgagagtataaaagtttagataatagttctcatctatcc 29367  T
Q  214 tcttgatcccttgattcacaatcaccccaaacttcttagcaataaaagtgatga 267  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  29366 tcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatga 29313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 205; Significance: 1e-112; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 20 - 267
Target Start/End: Complemental strand, 20001103 - 20000853
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 119  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20001103 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccagattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 20001004  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||||||||||    
T  20001003 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtgagagtataaaagtttagataatagttctcatctatcc 20000904  T
Q  214 tcttgatcccttgattcacaatcaccccaaacttcttagcaataaaagtgatga 267  Q
    |||||||||||||||||||| ||||||||||   ||||||||||||||||||||    
T  20000903 tcttgatcccttgattcacactcaccccaaa---cttagcaataaaagtgatga 20000853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 20040479 - 20040615
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||||||| | | ||||  |||||||| ||||||||||| || ||||||||||||||||||||  ||||||   || |||    
T  20040479 tgtacctgtgggttagtgccaacataaacctagttttctaccacctctggattagtaatatctgaattaggtagaataatcaagaaattagtagtattga 20040578  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatg 157  Q
     |||||| ||||||||||||||||||| |||| ||||    
T  20040579 ctctccactcatattggtaattgtgagaagggccatg 20040615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 21855186 - 21855323
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||| ||||||| ||||||||||   | ||||  ||||||| |||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  21855186 tgtacctgtaggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 21855282  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgggtt 161  Q
     |||||| ||||||||||||||||||| ||||| |||||||    
T  21855283 ctctccactcatattggtaattgtgagaagggttatgggtt 21855323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 157
Target Start/End: Complemental strand, 17619545 - 17619412
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| ||||||||||   | ||||  ||||||| |||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  17619545 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 17619449  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatg 157  Q
     |||||| ||||||||| ||||||||| |||| ||||    
T  17619448 ctctccactcatattggaaattgtgagaagggccatg 17619412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 183; Significance: 5e-99; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 20 - 267
Target Start/End: Original strand, 51962 - 52215
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 119  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||     
T  51962 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaata 52061  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||      |||||| ||||||||||||||||| || |||||||    
T  52062 attctccattcatattggtaattgtgagtagggtcatgggttataaggaaggacaaagtagtaagagtatataagtttagataatagttttcctctatcc 52161  T
Q  214 tcttgatcccttgattcacaatcaccccaaacttcttagcaataaaagtgatga 267  Q
    |||||||||||||||||||| |||||| |||| |||||||||||||||||||||    
T  52162 tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatga 52215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 163; Significance: 4e-87; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 20 - 267
Target Start/End: Original strand, 23712116 - 23712369
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 119  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||     
T  23712116 ttgtacctgtgggttaggaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaaaaattagttctaata 23712215  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    || ||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||      |||||| |||||| ||||||| || ||||||||||    
T  23712216 atcctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcc 23712315  T
Q  214 tcttgatcccttgattcacaatcaccccaaacttcttagcaataaaagtgatga 267  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||||||||    
T  23712316 tcttgatcccttgattcacactcaccctaaacctcttagcaacaaaagtgatga 23712369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 152
Target Start/End: Original strand, 20446255 - 20446386
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||||||| ||| ||||  ||||||| |||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  20446255 tgtacctgtgggttagtgccaacataaaccaagttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 20446354  T
Q  121 ttctccattcatattggtaattgtgagtaggg 152  Q
     |||||| ||||||||||||||||||| ||||    
T  20446355 ctctccactcatattggtaattgtgagaaggg 20446386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 21 - 158
Target Start/End: Original strand, 21282320 - 21282458
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaa-ttagctctaatg 119  Q
    ||||||||||||||||| |||||||||| ||| ||||  |||||||||||||||||||| | |||||| |||||||||||||| ||| |||||  || ||    
T  21282320 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatattcgaatttggtagaataatcaagcaatttagcgttattg 21282419  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgg 158  Q
    | |||||| ||||||||||||||||||| ||||| ||||    
T  21282420 actctccactcatattggtaattgtgagaagggttatgg 21282458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 18487473 - 18487596
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||||||| ||| ||||  |||||||| |||||| |||| || ||||||||||||||||||||  |||||||  || |||    
T  18487473 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctcaggattaataatatctgaattaggtagaataatcaagaaattagcattattga 18487572  T
Q  121 ttctccattcatattggtaattgt 144  Q
     |||||| ||||||||||||||||    
T  18487573 ctctccactcatattggtaattgt 18487596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 23602050 - 23602173
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| ||||||||||   | ||||  ||||||| |||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  23602050 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 23602146  T
Q  121 ttctccattcatattggtaattgtgag 147  Q
     || ||| ||||||||| |||||||||    
T  23602147 ctcgccactcatattgggaattgtgag 23602173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 24939334 - 24939200
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| ||||||||||   | ||||  ||||||| || ||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  24939334 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcgaattagtaatatctgaattaggtagaataatcaagaaattagcattattga 24939238  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgg 158  Q
     || ||| ||||||||| ||||||||| |||| |||||    
T  24939237 ctcgccactcatattgggaattgtgagaagggccatgg 24939200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 24218633 - 24218516
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||| ||||||||||| |||||||||    | ||||  |||| ||||||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  24218633 tgtacatgtgggttagtgccaacataat---agttttctaccatctccggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 24218537  T
Q  121 ttctccattcatattggtaat 141  Q
     |||||| |||||||||||||    
T  24218536 ctctccactcatattggtaat 24218516  T

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Target: scaffold0485 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 20 - 267
Target Start/End: Original strand, 11313 - 11567
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaatttttc-accacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaat 118  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  11313 ttgtacctgtgggttagtaccaacataaagcaaatttttccaccacctccagattagttatgtccggattaggtagaataatcaaacaattagctctaat 11412  T
Q  119 gattctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtag------tataaaagtttagataatagttctcatctatc 212  Q
     |||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||||||||      |||| |||| ||||||||||||| | ||||||    
T  11413 aattctccactcatattggtaattgtgagtatggtcatgggttctaaggaaggacaaagtagtgagattatataagtctagataatagttcccctctatc 11512  T
Q  213 ctcttgatcccttgattcacaatcaccccaaacttcttagcaataaaagtgatga 267  Q
    ||||||||||||||||||||| |||||||||||||  |||||||||| |||||||    
T  11513 ctcttgatcccttgattcacactcaccccaaactttctagcaataaaggtgatga 11567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 24501134 - 24500997
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||||||| ||| ||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||  || |||    
T  24501134 tgtacctgtgggttagtgccaacataaatcaagttttctaccacctccggattagtaatgtccgaattaggtagaataatcaagcaattagcattattga 24501035  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgg 158  Q
     |||||| | ||||||||||||||||| |||| |||||    
T  24501034 ctctccactaatattggtaattgtgagaagggccatgg 24500997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 166
Target Start/End: Original strand, 25339516 - 25339661
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||| |||| |||||| ||||||||||| ||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||||||||||| ||| |||    
T  25339516 tgtacatgtgagttagtgccaacataaagaaaattttccaccacctccagattagttatgtccggattaggtagaataatcaaacaattagccctattga 25339615  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgggttttaag 166  Q
       |||| |||||||||||||||||||| ||| |||| ||| ||||    
T  25339616 ccttccactcatattggtaattgtgagttgggccatgagttctaag 25339661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 18632 - 18509
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||||||| ||| ||||  |||||||||||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  18632 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 18533  T
Q  121 ttctccattcatattggtaattgt 144  Q
     |||||| ||||||||||||||||    
T  18532 ctctccactcatattggtaattgt 18509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 158
Target Start/End: Original strand, 11741 - 11860
Alignment:
Q  39 ccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggt 138  Q
    |||||||||| ||| ||||  ||||||||| |||||||||| ||||||||||||||||||||||| ||||||||  || ||| |||||| ||||||||||    
T  11741 ccaacataaaccaagttttctaccacctccagattagtaatatccgaattaggtagaataatcaagcaattagcattattgactctccactcatattggt 11840  T
Q  139 aattgtgagtagggtcatgg 158  Q
    ||||||||| ||||||||||    
T  11841 aattgtgagaagggtcatgg 11860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0566 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 157
Target Start/End: Complemental strand, 1411 - 1275
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||||||| ||| ||||  ||||||||| |||||||||| || ||||||||||||||||||||  |||||||   | |||    
T  1411 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccagattagtaatatctgaattaggtagaataatcaagaaattagcataattga 1312  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatg 157  Q
     |||||| |||||||||||||||| || |||||||||    
T  1311 ctctccactcatattggtaattgttagaagggtcatg 1275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 60 - 158
Target Start/End: Complemental strand, 17132 - 17034
Alignment:
Q  60 accacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggtaattgtgagtagggtcatgg 158  Q
    |||||||| | ||||||||| ||||||||||||||||||||||| ||||||||  || ||| |||||| ||||||||||||||||||| ||||||||||    
T  17132 accacctctgtattagtaatatccgaattaggtagaataatcaagcaattagcattattgactctccactcatattggtaattgtgagaagggtcatgg 17034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 158
Target Start/End: Original strand, 38043 - 38177
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| ||||||||||   | ||||  |||||||  | ||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  38043 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttagaattagtaatatctgaattaggtagaataatcaagaaattagcattattga 38139  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgg 158  Q
     || ||| ||||||||| ||||||||| |||| |||||    
T  38140 ctcgccactcatattggaaattgtgagaagggccatgg 38177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 12854 - 12977
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||||||   || ||||  ||||||||| |||||||||| ||  | |||||||||||||| |   |||||||  || |||    
T  12854 tgtacctgtgggttagtgccaacataa---aagttttctaccacctccagattagtaatatctaatttaggtagaataataaggaaattagcattattga 12950  T
Q  121 ttctccattcatattggtaattgtgag 147  Q
     |||| | |||||||||||| ||||||    
T  12951 ctctctactcatattggtaactgtgag 12977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 8745 - 8868
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaatttttcaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||| ||||||||||| ||||||||||   | ||||  ||||||||| |||||||||| ||  | |||||||||||||| |   |||||||  || |||    
T  8745 tgtacatgtgggttagtgccaacataaa---agttttctaccacctccagattagtaatatctaatttaggtagaataataaggaaattagcattattga 8841  T
Q  121 ttctccattcatattggtaattgtgag 147  Q
     |||| | |||||||||||| ||||||    
T  8842 ctctctactcatattggtaactgtgag 8868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1184 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1184
Description:

Target: scaffold1184; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 537 - 571
Alignment:
Q  28 gtgggttagtaccaacataaagcaaatttttcacc 62  Q
    |||||||||||||||||||||||||||||| ||||    
T  537 gtgggttagtaccaacataaagcaaattttccacc 571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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