View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2673_low_34 (Length: 257)
Name: NF2673_low_34
Description: NF2673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2673_low_34 |
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Alignment Details
Target: chr2 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 17 - 241
Target Start/End: Original strand, 34608454 - 34608675
Alignment:
| Q |
17 |
gttgttatgctcacttttaaatcttttgttttcgtacaagttaatcaagtccaagaaatgtttgatcattgatagttgtagtgccttggtaaatgaattt |
116 |
Q |
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| T |
34608454 |
gttgttatgctcgcttttaaatcttttgttttcgtacaagttaatcaagtccaagaaatgtttgatcattgatagttgtagtgccttggtaaatgaattt |
34608553 |
T |
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| Q |
117 |
gaaagattaaaaaatgatatggttggtctgagaggatgattattgagctgcttagatatgccgcctattgaggttgatatgtcgatatgcatgtcgtctg |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |
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| T |
34608554 |
gaaagattaaaaaatgatatggttggtctgagaggatg---attgagctgcttagatatgccgcctattgaggttgatatgccgatatgcatgttgtctg |
34608650 |
T |
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| Q |
217 |
cctggttctgctgaactatggtgag |
241 |
Q |
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| T |
34608651 |
cctggttctgctgaattgtggtgag |
34608675 |
T |
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