View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2674_high_17 (Length: 263)
Name: NF2674_high_17
Description: NF2674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2674_high_17 |
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Alignment Details
Target: chr3 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 8 - 243
Target Start/End: Original strand, 52449186 - 52449421
Alignment:
| Q |
8 |
gaagcagcaaagcaaaacgaaacgaaaaaatgagacctttggacgagacagaaacgagcgtggttttcgaaaagctcttcaaattcgtaggaaacaacct |
107 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52449186 |
gaagcagcaaagcaaaacgaaacgaaaaaatgagacctttggacgagacagaaacgagcgtggttttcgaaaagctcttcaaattcgtaggaaacaacct |
52449285 |
T |
|
| Q |
108 |
caaaaacctcgttgaaaatccctcacacgaaggtcctgattcaaatcctggtcgctactgtttccgtctgaacaagaacaaaatctattactgcagcgaa |
207 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
52449286 |
caaaaacctcgttgaaaatccctcacacgaaggtcccgattcaaatcctggtcgctactgtttccgtctcaacaagaacaaaatctattactgcagcgaa |
52449385 |
T |
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| Q |
208 |
tccctcgtcaagcgtgccaccaacatcgctagacct |
243 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
52449386 |
tccctcgtcaagcgtgccaccaacatcgctagacct |
52449421 |
T |
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