View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2674_low_23 (Length: 239)
Name: NF2674_low_23
Description: NF2674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2674_low_23 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 43965735 - 43965515
Alignment:
| Q |
19 |
attcctacttacaagatgcctccatctgctgtatataaatgcaccaagctaccaaattgtaattagctcttttatttccttcaccttattataccagata |
118 |
Q |
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| T |
43965735 |
attcctacttacaagatgcctccatctgctgtatataaatgcaccaagctaccaaattgtaattagctcttttatttccttcaccttattataccagata |
43965636 |
T |
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| Q |
119 |
aatggacatgtatagctcaagttgtgtacatctgtgtttgataacatcttattggaatactttcctgacagaaaaataaaattgttattatgttgattaa |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43965635 |
aatggacatgtatagctcaagttgtgtacatctgtgtttgataacatcttattgtaatactttcctgacagaaaaataaaattgttattatgttgattaa |
43965536 |
T |
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| Q |
219 |
aattactaaagataattggaa |
239 |
Q |
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||||||||||||||||||||| |
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| T |
43965535 |
aattactaaagataattggaa |
43965515 |
T |
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