View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2675_high_31 (Length: 228)
Name: NF2675_high_31
Description: NF2675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2675_high_31 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 33185831 - 33185604
Alignment:
| Q |
1 |
tgtcattctccatcatcgacgcttcaaagaagcgaaaacgatggacgaagattttcccgctacaatcgttcgctgaccctggttgtccaatttcaccttc |
100 |
Q |
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| T |
33185831 |
tgtcattctccatcatcgacgcttcaaagaagcgaaaacgatggacgaagattttcccgctacaatcgttcgctgaccctggttgtccaatttcaccttc |
33185732 |
T |
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| Q |
101 |
aggtccgttccgtgaaaacgttcgactctttcttcaagaagctggtgagcttgaagattatacggttatgggaaatcctctttggtgtacttttctgatt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
33185731 |
aggtccgttccgtgaaaacgttcgactctttcttcaagaagctggtgagcttgaagattatacggttatgggaaatcctctttggtgcacttttctgatt |
33185632 |
T |
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| Q |
201 |
catgaaaagaagaatctaatggttcctt |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
33185631 |
catgaaaagaagaatctaatggttcctt |
33185604 |
T |
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