View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2675_high_34 (Length: 212)
Name: NF2675_high_34
Description: NF2675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2675_high_34 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 2 - 212
Target Start/End: Complemental strand, 31785661 - 31785451
Alignment:
| Q |
2 |
gtactctggatctccaacttcttatctcttagtttaaaatagttgagctatccaaccctctattattcatacttattaatttcaaaacaatttatgaata |
101 |
Q |
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| T |
31785661 |
gtactctggatctccaacttcttatctcttagtttaaactagttgagttatccaaccctatattattcatacttattaatttcaaaacaatttatggata |
31785562 |
T |
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| Q |
102 |
taattacttgatcagtattaagaaaatgatactagnnnnnnntatatattctttgagcacactaaagatcatttttaaagaaatcgaggttaagattagt |
201 |
Q |
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| T |
31785561 |
tgattacttgatcagtattaagaaaatgatactagaaaaaaatatatattctttgagcacactaaagatcatttttaaggaaatagaggttaaaattaat |
31785462 |
T |
|
| Q |
202 |
ttttaaacaac |
212 |
Q |
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|| |||||||| |
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| T |
31785461 |
ttataaacaac |
31785451 |
T |
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