View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2675_high_8 (Length: 342)
Name: NF2675_high_8
Description: NF2675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2675_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 7 - 327
Target Start/End: Original strand, 34221790 - 34222110
Alignment:
| Q |
7 |
aatattggagattcaattcaaccaagtacacatagttttctatgtccaaaatgaggacacgaattctagcttttatccatgcaatcatgtccccttcgaa |
106 |
Q |
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| T |
34221790 |
aatattggagattcaattcaaccaagtacacatagttttctatgtccaaaatgaggacacgaattctagcttttatccatgcaatcatgtccccttccca |
34221889 |
T |
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| Q |
107 |
acctttgatcctcttaacttttcctatatgttggtcccttgagaccccactcccatgatctgcaacaacttgtcccattaccaaacaaattagtcactaa |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |
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| T |
34221890 |
acctttgatcctcttaacttttcctatatgttggtcccttaagaccccactcccatgatcagcaacaacttgtcccattaacaaacaaattagtcactaa |
34221989 |
T |
|
| Q |
207 |
tcataaatagtttggatgcatttaacttatgtaagaaactgttcataggaatcgttttgatgcaacatggaaaattcaatacactcttctcttacaaaca |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34221990 |
tcataaatagtttggatgcatttaacttatgtaagaaactgttcataggaattattttgatgcaacatggaaaattcaatacactcttctcttacaaaca |
34222089 |
T |
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| Q |
307 |
acaatattatctattgtaata |
327 |
Q |
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||||||||||||||||||||| |
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| T |
34222090 |
acaatattatctattgtaata |
34222110 |
T |
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