View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2675_low_12 (Length: 403)
Name: NF2675_low_12
Description: NF2675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2675_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 352; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 7 - 402
Target Start/End: Complemental strand, 32682601 - 32682209
Alignment:
| Q |
7 |
atttgaagttctatgattgtatgtatataatctacaagacatcaaattttaaaaatagtgtaatctaaatgaaaaataatgctacataatccgtttcctt |
106 |
Q |
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| T |
32682601 |
atttgaagttctatgattgtat----ataatctacaagacatcaaattttaaaaatagtgtaatctaaatgaaaaataatcctacataatccgtttcctt |
32682506 |
T |
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| Q |
107 |
tttctttacgctatttattggactacatggttcacaagcatttgaatattacggctttgttttttgttttgttatataaataatgagccaagatgcaaaa |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
32682505 |
tttctttacgctatttattggactacatggttcacaagcatttgaatattacagctttgttttttgttttgttatataaataatgaaacaagatgcaaaa |
32682406 |
T |
|
| Q |
207 |
tccatatattttgctgtcaaccaatgggaaaaatgggatggtggaaaatatattgttgtatcatcatatttcatatggaggcagcatgtttcccttactc |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32682405 |
tccatatattttgctgtcaaccaatgggaaaaatgggatgttggaaaatatattgttgtatcatcatatttcatatggaggcagcatgtttcccttactc |
32682306 |
T |
|
| Q |
307 |
aatcaccacggaa-aaaacaatcaaatagtaagacccacctgcacaatcccttcattaaggatacatgggatatgagcaatgtatcaattatttgtt |
402 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32682305 |
aatcaccacggaaaaaaacaatcaaatagtaagacccacctgcacaatcccttcattaaggatacatgggatatgagcaatgtatcaattatttgtt |
32682209 |
T |
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