View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2675_low_16 (Length: 336)
Name: NF2675_low_16
Description: NF2675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2675_low_16 |
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Alignment Details
Target: chr4 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 28 - 320
Target Start/End: Complemental strand, 40063297 - 40063005
Alignment:
| Q |
28 |
cccttatacacgtttttatcacatctattttttccttgtcagagaaaaaacagtttccttaatcttcataataactctatactacgtatctttcaaactt |
127 |
Q |
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| T |
40063297 |
cccttatacacgtttttatcacatctattttttccttgtcagagaaaaaacagtttccttaatcttcataataactctatactacgtatctttcaaactt |
40063198 |
T |
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| Q |
128 |
caaacgtcacaacccatttcataactcaacacaacaatttattatttattattacaacacagcacaaacccgcttcacttcacttctacaagaaattgtt |
227 |
Q |
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| T |
40063197 |
caaacgtcacaacccatttcataactcaacacaacaatttattatttattattacaacacagcacaaacccacttcacttcacttctacaagaaattgtt |
40063098 |
T |
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| Q |
228 |
agaatatggggaattgtcaagctgcagaattggcaacagttgtgattcatcatccagggaacaaggttgagaggatttattggtctgttagtg |
320 |
Q |
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| T |
40063097 |
agaatatggggaattgtcaagctgcagaattggcaacagttgtgattcatcgtccagggaacaaggttgagaggatttattggtctgttagtg |
40063005 |
T |
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