View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2675_low_18 (Length: 326)

Name: NF2675_low_18
Description: NF2675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2675_low_18
NF2675_low_18
[»] chr4 (47 HSPs)
chr4 (31-307)||(48529680-48529959)
chr4 (68-125)||(52298111-52298168)
chr4 (73-125)||(14801826-14801878)
chr4 (73-125)||(15507959-15508011)
chr4 (73-125)||(34765666-34765718)
chr4 (73-125)||(35028284-35028336)
chr4 (68-124)||(41583518-41583574)
chr4 (73-120)||(18831439-18831486)
chr4 (68-130)||(7280387-7280449)
chr4 (74-132)||(16605693-16605751)
chr4 (74-120)||(32950233-32950279)
chr4 (73-125)||(37976439-37976491)
chr4 (68-124)||(40387552-40387608)
chr4 (72-120)||(43155787-43155835)
chr4 (68-132)||(48528557-48528621)
chr4 (73-125)||(53701902-53701954)
chr4 (73-120)||(13058127-13058174)
chr4 (73-120)||(23613399-23613446)
chr4 (74-125)||(24349765-24349816)
chr4 (73-120)||(36009104-36009151)
chr4 (73-120)||(49879467-49879514)
chr4 (74-120)||(4982986-4983032)
chr4 (74-120)||(9145026-9145072)
chr4 (74-120)||(27934623-27934669)
chr4 (73-123)||(35508528-35508578)
chr4 (74-120)||(38012261-38012307)
chr4 (74-120)||(42738291-42738337)
chr4 (73-119)||(44967330-44967376)
chr4 (73-114)||(54086992-54087033)
chr4 (77-125)||(17356208-17356256)
chr4 (73-117)||(37248326-37248370)
chr4 (73-125)||(52909343-52909395)
chr4 (73-120)||(5369037-5369084)
chr4 (73-120)||(24711201-24711248)
chr4 (73-120)||(50418928-50418975)
chr4 (74-129)||(56014816-56014871)
chr4 (74-120)||(9400779-9400825)
chr4 (74-120)||(22566890-22566936)
chr4 (74-120)||(33247533-33247579)
chr4 (74-120)||(34837334-34837380)
chr4 (81-125)||(53129792-53129836)
chr4 (74-125)||(10781770-10781821)
chr4 (74-129)||(56015929-56015984)
chr4 (73-115)||(16005928-16005970)
chr4 (73-123)||(55867402-55867452)
chr4 (68-125)||(41582532-41582589)
chr4 (73-125)||(24411448-24411500)
[»] chr1 (55 HSPs)
chr1 (68-307)||(34849096-34849320)
chr1 (68-132)||(34850344-34850408)
chr1 (65-119)||(10304147-10304201)
chr1 (67-130)||(42267387-42267450)
chr1 (73-125)||(6367652-6367704)
chr1 (67-119)||(10304007-10304059)
chr1 (73-125)||(32917350-32917402)
chr1 (73-125)||(40210656-40210708)
chr1 (74-125)||(37578478-37578529)
chr1 (74-120)||(4716728-4716774)
chr1 (68-130)||(21444679-21444741)
chr1 (68-130)||(22103787-22103849)
chr1 (68-125)||(27999137-27999194)
chr1 (73-118)||(36694541-36694586)
chr1 (73-118)||(36710642-36710687)
chr1 (72-120)||(183482-183530)
chr1 (73-125)||(1841549-1841601)
chr1 (73-125)||(4960630-4960682)
chr1 (73-125)||(13914353-13914405)
chr1 (73-125)||(17662136-17662188)
chr1 (73-125)||(24009827-24009879)
chr1 (69-125)||(25065019-25065075)
chr1 (72-120)||(25647973-25648021)
chr1 (73-121)||(42248563-42248611)
chr1 (67-130)||(13245934-13245997)
chr1 (69-132)||(25065909-25065972)
chr1 (73-132)||(44523415-44523474)
chr1 (77-128)||(48691242-48691293)
chr1 (69-123)||(16970823-16970877)
chr1 (74-120)||(24905427-24905473)
chr1 (74-120)||(28011454-28011500)
chr1 (74-120)||(31514577-31514623)
chr1 (74-120)||(33442854-33442900)
chr1 (73-125)||(1103551-1103603)
chr1 (73-125)||(14879061-14879113)
chr1 (73-125)||(30711417-30711469)
chr1 (73-125)||(34464735-34464787)
chr1 (73-125)||(43758912-43758964)
chr1 (73-125)||(46163120-46163172)
chr1 (72-120)||(47999383-47999431)
chr1 (73-120)||(26024513-26024560)
chr1 (74-120)||(52134159-52134205)
chr1 (73-118)||(19515909-19515954)
chr1 (73-118)||(40772597-40772642)
chr1 (65-125)||(9443654-9443714)
chr1 (73-125)||(35152433-35152485)
chr1 (69-121)||(40435431-40435483)
chr1 (68-130)||(19227047-19227109)
chr1 (76-118)||(23209620-23209662)
chr1 (73-162)||(17691309-17691398)
chr1 (72-117)||(19017923-19017968)
chr1 (75-130)||(31197152-31197207)
chr1 (73-125)||(41098823-41098875)
chr1 (76-132)||(42533104-42533160)
chr1 (73-125)||(48779207-48779259)
[»] chr3 (33 HSPs)
chr3 (68-125)||(41988047-41988104)
chr3 (65-125)||(54317917-54317977)
chr3 (67-125)||(39399378-39399436)
chr3 (72-125)||(33689665-33689718)
chr3 (73-132)||(33156273-33156332)
chr3 (73-124)||(51994173-51994224)
chr3 (73-125)||(23458265-23458317)
chr3 (73-125)||(26463884-26463936)
chr3 (73-125)||(40758234-40758286)
chr3 (68-119)||(42854520-42854569)
chr3 (73-125)||(43384373-43384425)
chr3 (73-120)||(2796269-2796316)
chr3 (73-120)||(19741183-19741230)
chr3 (72-115)||(40506083-40506126)
chr3 (74-120)||(8041707-8041753)
chr3 (74-120)||(10770751-10770797)
chr3 (68-130)||(30380931-30380993)
chr3 (74-120)||(36314558-36314604)
chr3 (74-120)||(48322637-48322683)
chr3 (74-120)||(54466514-54466560)
chr3 (67-124)||(44654790-44654847)
chr3 (73-125)||(9294244-9294296)
chr3 (67-126)||(20704514-20704573)
chr3 (67-130)||(20704608-20704671)
chr3 (74-132)||(25107304-25107362)
chr3 (74-132)||(25108374-25108432)
chr3 (73-118)||(46474905-46474950)
chr3 (74-125)||(9367832-9367883)
chr3 (69-163)||(29192121-29192216)
chr3 (73-120)||(55052539-55052586)
chr3 (69-123)||(32717065-32717119)
chr3 (73-115)||(40033752-40033794)
chr3 (67-119)||(14634044-14634096)
[»] chr8 (35 HSPs)
chr8 (73-125)||(13186150-13186202)
chr8 (73-125)||(16388812-16388864)
chr8 (73-125)||(36928566-36928618)
chr8 (68-130)||(11291192-11291254)
chr8 (132-202)||(29566414-29566484)
chr8 (75-125)||(31608799-31608849)
chr8 (74-119)||(12199211-12199256)
chr8 (74-119)||(12443639-12443684)
chr8 (73-125)||(35756672-35756724)
chr8 (73-125)||(39071766-39071818)
chr8 (73-125)||(40318250-40318302)
chr8 (73-120)||(1425313-1425360)
chr8 (73-120)||(23663805-23663852)
chr8 (74-120)||(3041716-3041762)
chr8 (74-120)||(36325325-36325371)
chr8 (74-120)||(38845559-38845605)
chr8 (73-119)||(38862708-38862754)
chr8 (73-119)||(38955793-38955839)
chr8 (74-120)||(40775910-40775956)
chr8 (74-120)||(44407117-44407163)
chr8 (65-125)||(2693803-2693863)
chr8 (73-125)||(4405946-4405998)
chr8 (73-120)||(8316879-8316926)
chr8 (73-120)||(22915649-22915696)
chr8 (73-120)||(23698535-23698582)
chr8 (67-130)||(24085858-24085921)
chr8 (74-120)||(2266583-2266629)
chr8 (74-120)||(11674786-11674831)
chr8 (73-119)||(36186359-36186405)
chr8 (65-125)||(9499884-9499943)
chr8 (73-117)||(12273147-12273191)
chr8 (65-125)||(31873185-31873245)
chr8 (74-118)||(35449871-35449915)
chr8 (65-100)||(31872970-31873005)
chr8 (74-132)||(20385659-20385717)
[»] chr2 (39 HSPs)
chr2 (67-130)||(11721371-11721434)
chr2 (73-125)||(15848178-15848230)
chr2 (73-125)||(36755183-36755235)
chr2 (73-125)||(37895633-37895685)
chr2 (67-130)||(11689625-11689688)
chr2 (73-125)||(36382251-36382303)
chr2 (73-125)||(39423605-39423657)
chr2 (73-125)||(44714047-44714099)
chr2 (73-120)||(6657968-6658015)
chr2 (68-131)||(10840561-10840624)
chr2 (73-120)||(16099145-16099192)
chr2 (73-120)||(39498400-39498447)
chr2 (68-122)||(11347508-11347562)
chr2 (74-120)||(14900743-14900789)
chr2 (74-120)||(33739794-33739840)
chr2 (73-118)||(11163316-11163361)
chr2 (73-125)||(2318248-2318300)
chr2 (73-125)||(10712813-10712865)
chr2 (67-115)||(17266482-17266530)
chr2 (73-125)||(36479808-36479860)
chr2 (65-112)||(16105634-16105681)
chr2 (65-112)||(17266629-17266676)
chr2 (73-132)||(25893497-25893556)
chr2 (74-120)||(13995933-13995979)
chr2 (74-120)||(33062310-33062356)
chr2 (74-120)||(41248819-41248865)
chr2 (68-121)||(6846869-6846922)
chr2 (73-118)||(22051287-22051331)
chr2 (85-125)||(34447914-34447954)
chr2 (69-132)||(11349484-11349547)
chr2 (73-132)||(25892484-25892543)
chr2 (74-120)||(1696000-1696046)
chr2 (73-131)||(6577557-6577615)
chr2 (69-123)||(6848022-6848076)
chr2 (69-123)||(25623374-25623428)
chr2 (74-132)||(44044205-44044263)
chr2 (68-125)||(3653366-3653423)
chr2 (73-118)||(45556202-45556247)
chr2 (73-121)||(6573136-6573184)
[»] chr7 (37 HSPs)
chr7 (73-122)||(45010893-45010942)
chr7 (73-125)||(42019883-42019935)
chr7 (73-123)||(27396883-27396933)
chr7 (73-125)||(2640464-2640516)
chr7 (73-125)||(28469294-28469346)
chr7 (73-125)||(32053429-32053481)
chr7 (73-125)||(40379859-40379911)
chr7 (73-125)||(42731509-42731561)
chr7 (73-132)||(5457186-5457245)
chr7 (73-120)||(17102110-17102157)
chr7 (73-120)||(27991829-27991876)
chr7 (74-120)||(30948420-30948466)
chr7 (74-120)||(32680855-32680901)
chr7 (68-125)||(20563819-20563876)
chr7 (73-125)||(10935884-10935936)
chr7 (68-132)||(11397463-11397527)
chr7 (67-119)||(13311325-13311377)
chr7 (73-125)||(45010688-45010740)
chr7 (68-119)||(11400261-11400312)
chr7 (73-124)||(24388909-24388960)
chr7 (73-120)||(32298996-32299043)
chr7 (74-120)||(34928910-34928956)
chr7 (74-120)||(39686794-39686840)
chr7 (73-118)||(22871570-22871615)
chr7 (73-125)||(3914228-3914280)
chr7 (73-125)||(23181280-23181332)
chr7 (69-125)||(38643636-38643692)
chr7 (73-120)||(6253561-6253608)
chr7 (73-120)||(6571103-6571150)
chr7 (73-120)||(19204579-19204626)
chr7 (69-132)||(45915759-45915822)
chr7 (69-123)||(12644093-12644147)
chr7 (73-123)||(43124440-43124490)
chr7 (69-123)||(45914610-45914664)
chr7 (74-123)||(17886778-17886827)
chr7 (80-125)||(37656949-37656994)
chr7 (68-132)||(20426609-20426673)
[»] chr6 (22 HSPs)
chr6 (72-125)||(33647052-33647105)
chr6 (73-125)||(3059347-3059399)
chr6 (68-130)||(1215147-1215209)
chr6 (73-125)||(12080726-12080778)
chr6 (73-125)||(21627999-21628051)
chr6 (73-125)||(33517624-33517676)
chr6 (68-130)||(26463264-26463326)
chr6 (74-120)||(28000645-28000691)
chr6 (74-120)||(30337540-30337586)
chr6 (68-130)||(33648746-33648808)
chr6 (73-118)||(30803951-30803996)
chr6 (73-125)||(11392928-11392980)
chr6 (73-125)||(30725849-30725901)
chr6 (73-120)||(17734454-17734501)
chr6 (65-132)||(28498304-28498371)
chr6 (65-132)||(29810715-29810782)
chr6 (74-120)||(363090-363136)
chr6 (74-120)||(14196875-14196921)
chr6 (68-101)||(10782494-10782527)
chr6 (68-132)||(141019-141083)
chr6 (68-132)||(149040-149104)
chr6 (68-125)||(24210616-24210673)
[»] scaffold0031 (1 HSPs)
scaffold0031 (73-125)||(69055-69107)
[»] scaffold0005 (1 HSPs)
scaffold0005 (73-125)||(37849-37901)
[»] chr5 (42 HSPs)
chr5 (73-125)||(11047527-11047579)
chr5 (73-125)||(13962954-13963006)
chr5 (73-125)||(32242332-32242384)
chr5 (73-125)||(5993979-5994031)
chr5 (65-125)||(12904836-12904896)
chr5 (73-125)||(19892594-19892646)
chr5 (73-125)||(35512238-35512290)
chr5 (73-120)||(3529133-3529180)
chr5 (73-124)||(24547412-24547463)
chr5 (74-120)||(297274-297320)
chr5 (74-120)||(6758125-6758171)
chr5 (67-125)||(14848993-14849051)
chr5 (73-119)||(38442158-38442204)
chr5 (73-119)||(38475291-38475337)
chr5 (74-120)||(41930607-41930653)
chr5 (73-118)||(28269681-28269726)
chr5 (73-118)||(28771131-28771176)
chr5 (73-125)||(5024304-5024356)
chr5 (73-125)||(13362514-13362566)
chr5 (73-125)||(14194709-14194761)
chr5 (73-125)||(20840623-20840675)
chr5 (73-125)||(29646648-29646700)
chr5 (74-118)||(31482664-31482708)
chr5 (73-125)||(39453390-39453442)
chr5 (65-124)||(15644999-15645058)
chr5 (73-120)||(27587238-27587285)
chr5 (74-120)||(1506058-1506104)
chr5 (73-115)||(8322494-8322536)
chr5 (69-123)||(22870422-22870476)
chr5 (73-115)||(35920480-35920522)
chr5 (73-118)||(6150544-6150589)
chr5 (72-125)||(10684028-10684081)
chr5 (72-125)||(18247173-18247226)
chr5 (73-125)||(186509-186561)
chr5 (65-113)||(14848821-14848869)
chr5 (73-125)||(16157141-16157193)
chr5 (73-125)||(17202489-17202541)
chr5 (73-125)||(20814421-20814473)
chr5 (73-120)||(11761839-11761886)
chr5 (73-119)||(16083067-16083113)
chr5 (73-118)||(18670289-18670334)
chr5 (73-125)||(21265429-21265479)
[»] scaffold0347 (2 HSPs)
scaffold0347 (69-132)||(14544-14607)
scaffold0347 (69-125)||(13695-13751)
[»] scaffold0007 (1 HSPs)
scaffold0007 (73-120)||(1859-1906)
[»] scaffold0559 (1 HSPs)
scaffold0559 (74-120)||(1324-1370)
[»] scaffold0024 (1 HSPs)
scaffold0024 (74-120)||(141854-141900)
[»] scaffold0020 (1 HSPs)
scaffold0020 (74-120)||(139763-139809)
[»] scaffold0220 (2 HSPs)
scaffold0220 (67-123)||(23315-23371)
scaffold0220 (73-132)||(24625-24684)
[»] scaffold0295 (1 HSPs)
scaffold0295 (72-123)||(2232-2283)
[»] scaffold0182 (1 HSPs)
scaffold0182 (65-132)||(31706-31773)
[»] scaffold0205 (1 HSPs)
scaffold0205 (74-120)||(21229-21275)
[»] scaffold0008 (1 HSPs)
scaffold0008 (67-132)||(239830-239895)
[»] scaffold0291 (1 HSPs)
scaffold0291 (65-121)||(6719-6774)
[»] scaffold0027 (1 HSPs)
scaffold0027 (65-125)||(14077-14136)
[»] scaffold0184 (1 HSPs)
scaffold0184 (68-130)||(8138-8200)
[»] scaffold0181 (1 HSPs)
scaffold0181 (70-130)||(9294-9353)


Alignment Details
Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 31 - 307
Target Start/End: Complemental strand, 48529959 - 48529680
Alignment:
Q  31 ggatcgtttaaaaataggtcactgttgtcgctaatcc---caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactga 127  Q
    ||||||||||||||| | |||| ||  ||||||||||   ||||||||||||||||||||||| ||| |||||  |||||||||||||||||||||||||    
T  48529959 ggatcgtttaaaaattgttcaccgtattcgctaatcctttcaaaatttaatcatttaaaattttgtccctctctccacttaatcactgccacgtcactga 48529860  T
Q  128 ttagcaaaagatgatgtgaactgacaaaaatacccttaagacttcagccaaaagcaaaatgaccaaaatgcccccaactctttcttcaatccaaaaacac 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  48529859 ttagcaaaagatgatgtgaactgacaaaaatacccttaagacttcagccaaaagcaaattgaccaaagtgcccccaactctttcttcaatccaaaaacac 48529760  T
Q  228 aatccaacaattcatcttcattcatctccaatctgaaattcagttcatataccaatcatcaccgccgccatataaccaca 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48529759 aatccaacaattcatcttcattcatctccaatctgaaattcagttcatataccaatcatcaccgccgccatataaccaca 48529680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 52298111 - 52298168
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  52298111 caaaatttaatcatttaaaatttcgtctctctccccacttaatcactgccacgtcact 52298168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 14801826 - 14801878
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  14801826 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcact 14801878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 15508011 - 15507959
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  15508011 tttaatcatttaaaatttcgtctctctccccacttaatcactgccgcgtcact 15507959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 34765718 - 34765666
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  34765718 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcact 34765666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 35028336 - 35028284
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  35028336 tttaatcatttaaaatttcgtcactctccccacttaatcactgccacgtcact 35028284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 41583574 - 41583518
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcac 124  Q
    ||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  41583574 caaaagttaatcatttaaaatttcgtccctcttctcacttaatcactgccacgtcac 41583518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 18831439 - 18831486
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18831439 tttaatcatttaaaatttcgtctctctccccacttaatcactgccacg 18831486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 130
Target Start/End: Complemental strand, 7280449 - 7280387
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgatta 130  Q
    ||||||||||||| ||||||||  |||||||||| ||||||||||||||||||||||| ||||    
T  7280449 caaaatttaatcacttaaaattatgtctctctccccacttaatcactgccacgtcactaatta 7280387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 16605693 - 16605751
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagc 132  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||||||||| ||||||    
T  16605693 ttaatcatttaaaatttcgtccctccccccacttaatcactgccacgtcactaattagc 16605751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 32950233 - 32950279
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  32950233 ttaatcatttaaaatttcgtctctctccccacttaatcactgccacg 32950279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 37976491 - 37976439
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  37976491 tttaatcatttaaaatttcgtcactctccccacttaatcactgccatgtcact 37976439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 124
Target Start/End: Original strand, 40387552 - 40387608
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcac 124  Q
    ||||| ||||||||||||||||||||  |||| ||||||||||||||||||||||||    
T  40387552 caaaagttaatcatttaaaatttcgttcctcttctcacttaatcactgccacgtcac 40387608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 72 - 120
Target Start/End: Complemental strand, 43155835 - 43155787
Alignment:
Q  72 atttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  43155835 atttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 43155787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 48528557 - 48528621
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagc 132  Q
    ||||||||||||||||||||||||||  || ||| ||||||||||||| ||| ||||||||||||    
T  48528557 caaaatttaatcatttaaaatttcgttcctatccccacttaatcactgtcacatcactgattagc 48528621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 53701902 - 53701954
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||||| || |||||| |||||||||||||||||||||||    
T  53701902 tttaatcatttaaaatttcttccctctccccacttaatcactgccacgtcact 53701954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 13058127 - 13058174
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  13058127 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 13058174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 23613399 - 23613446
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  23613399 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 23613446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 24349765 - 24349816
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||||||| |||||| || ||||||||||||||||||||    
T  24349765 ttaatcatttaaaatttcgtccctctccccagttaatcactgccacgtcact 24349816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 36009151 - 36009104
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  36009151 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 36009104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 49879514 - 49879467
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  49879514 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 49879467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 4983032 - 4982986
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  4983032 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 4982986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 9145072 - 9145026
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  9145072 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 9145026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 27934623 - 27934669
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  27934623 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 27934669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 123
Target Start/End: Complemental strand, 35508578 - 35508528
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtca 123  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||| ||||    
T  35508578 tttaatcatttaaaatttcgtatctctccccacttaatcactgccatgtca 35508528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 38012261 - 38012307
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||    
T  38012261 ttaatcgtttaaaatttcgtctctctccccacttaatcactgccacg 38012307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 42738337 - 42738291
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  42738337 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 42738291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 44967376 - 44967330
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccac 119  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||    
T  44967376 tttaatcatttaaaatttcgtccctctccccacttaatcactgccac 44967330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 54087033 - 54086992
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcact 114  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  54087033 tttaatcatttaaaatttcgtctctctccccacttaatcact 54086992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 17356256 - 17356208
Alignment:
Q  77 atcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||| |||||| ||||||||||||| |||||||||    
T  17356256 atcatttaaaatttcgtccctctccccacttaatcactgtcacgtcact 17356208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 37248326 - 37248370
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgcc 117  Q
    |||||||||||||||||||||| |||||| |||||||||||||||    
T  37248326 tttaatcatttaaaatttcgtcgctctccccacttaatcactgcc 37248370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 52909343 - 52909395
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||||||||  ||||| |||||||||||||||| ||||||    
T  52909343 tttaatcatttaaaatttcgtccatctccccacttaatcactgccatgtcact 52909395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 5369037 - 5369084
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||| ||| |||||| ||||||||||||||||||    
T  5369037 tttaatcatttaaaattttgtccctctccccacttaatcactgccacg 5369084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 24711201 - 24711248
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||||||| |||||| |||||||||||| |||||    
T  24711201 tttaatcatttaaaatttcgtccctctccccacttaatcactaccacg 24711248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 50418975 - 50418928
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||||||| |||||| ||||||||||||| ||||    
T  50418975 tttaatcatttaaaatttcgtccctctccccacttaatcactgtcacg 50418928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 129
Target Start/End: Original strand, 56014816 - 56014871
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgatt 129  Q
    ||||||||||||||||||||| |||  | || ||||||||||||||||||||||||    
T  56014816 ttaatcatttaaaatttcgtccctcatcacagttaatcactgccacgtcactgatt 56014871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 9400825 - 9400779
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||| || |||||| ||||||||||||||||||    
T  9400825 ttaatcatttaaaatttcatccctctccccacttaatcactgccacg 9400779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 22566890 - 22566936
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||| || |||||| ||||||||||||||||||    
T  22566890 ttaatcatttaaaatttcatccctctccccacttaatcactgccacg 22566936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 33247579 - 33247533
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||| || |||||| ||||||||||||||||||    
T  33247579 ttaatcatttaaaatttcatccctctccccacttaatcactgccacg 33247533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 34837380 - 34837334
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||| |||||||||||||| |||||| ||||||||||||||||||    
T  34837380 ttaatcgtttaaaatttcgtccctctccccacttaatcactgccacg 34837334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 53129836 - 53129792
Alignment:
Q  81 tttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||| |||||| ||||||||||||||||| |||||    
T  53129836 tttaaaatttcgtccctctccccacttaatcactgccacatcact 53129792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 10781821 - 10781770
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||||||| |||||| || |||| ||||| |||||||||    
T  10781821 ttaatcatttaaaatttcgtccctctccccagttaaccactgtcacgtcact 10781770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 129
Target Start/End: Complemental strand, 56015984 - 56015929
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgatt 129  Q
    |||||||||||||||||||||  ||  | || ||||||||||||||||||||||||    
T  56015984 ttaatcatttaaaatttcgtccttcatcacagttaatcactgccacgtcactgatt 56015929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 115
Target Start/End: Original strand, 16005928 - 16005970
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactg 115  Q
    |||||||||||||||||||||| ||||||  ||||||||||||    
T  16005928 tttaatcatttaaaatttcgtccctctccctacttaatcactg 16005970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 123
Target Start/End: Complemental strand, 55867452 - 55867402
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtca 123  Q
    |||||||||||||||||||||| || | | || ||||||||||||||||||    
T  55867452 tttaatcatttaaaatttcgtccctattcccagttaatcactgccacgtca 55867402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 41582532 - 41582589
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||| ||||||||||||||||||||| |||  | || ||||||| ||||||||||||    
T  41582532 caaaagttaatcatttaaaatttcgtccctcatcacagttaatcattgccacgtcact 41582589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 24411448 - 24411500
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||  |||||| |||| | |||||||||||| ||||||||||    
T  24411448 tttaatcatttaaagattcgtccctcttcccacttaatcactcccacgtcact 24411500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 141; Significance: 6e-74; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 68 - 307
Target Start/End: Original strand, 34849096 - 34849320
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagcaaaagatgatgtgaactgacaaaaatacccttaag 167  Q
    ||||||||||||||||||||||||||| |||||| | |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||  | ||    
T  34849096 caaaatttaatcatttaaaatttcgtccctctcccctcttaatcactgccacgtcaccgattagcaaaagatgctgtgaactgacaaaaatacc--tgag 34849193  T
Q  168 acttcagccaaaagcaaaatgaccaaaatgcccccaactctttcttcaatccaaaaacacaatccaacaattcatcttcattcatctccaatctgaaatt 267  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||             |||||||| |||||||||||||||||||||||| |||||||    
T  34849194 acttcagccaaaagcgaaatgaccaaaatgcccctaactctttctt-------------caatccaataattcatcttcattcatctccaatatgaaatt 34849280  T
Q  268 cagttcatataccaatcatcaccgccgccatataaccaca 307  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  34849281 cagttcatctaccaatcatcaccgccgccatataaccaca 34849320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 34850408 - 34850344
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagc 132  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||    
T  34850408 caaaatttaatcatttaaaatttcatccctctccccacttaatcactgccacgtcactgattagc 34850344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 10304201 - 10304147
Alignment:
Q  65 tcccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccac 119  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10304201 tcccaaaatttaatcatttaaaatttcgtctctctccccacttaatcactgccac 10304147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 42267387 - 42267450
Alignment:
Q  67 ccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgatta 130  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||| ||||    
T  42267387 ccaaaatttaatcatttaatatttcgtctctctccccacttaatcactaccacgtcactaatta 42267450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 6367652 - 6367704
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  6367652 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcact 6367704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 10304007 - 10304059
Alignment:
Q  67 ccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccac 119  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  10304007 ccaaaatttaatcatttaaaatttcgtccctctccccacttaatcactgccac 10304059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 32917350 - 32917402
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  32917350 tttaatcatttaaaatttcgtctctctccccacttaatcactgccacatcact 32917402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 40210708 - 40210656
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  40210708 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcact 40210656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 37578529 - 37578478
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  37578529 ttaatcatttaaaatttcgtcactctccccacttaatcactgccacgtcact 37578478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 4716774 - 4716728
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  4716774 ttaatcatttaaaatttcgtctctctccccacttaatcactgccacg 4716728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 21444679 - 21444741
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgatta 130  Q
    ||||||||||||| |||||||||||||  ||||| ||||||||||||||||||||||| ||||    
T  21444679 caaaatttaatcacttaaaatttcgtccatctccccacttaatcactgccacgtcactaatta 21444741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 130
Target Start/End: Complemental strand, 22103849 - 22103787
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgatta 130  Q
    ||||||||||||| ||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  22103849 caaaatttaatcacttaaaatttcgtccctctctccacttaatcactgccacgtcactaatta 22103787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 125
Target Start/End: Complemental strand, 27999194 - 27999137
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||| ||||||||||||||| | ||||||||||||||||| |||||    
T  27999194 caaaatttaatcattttaaatttcgtctctcttcccacttaatcactgccacctcact 27999137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 36694586 - 36694541
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgcca 118  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  36694586 tttaatcatttaaaatttcgtctctctccccacttaatcactgcca 36694541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 36710687 - 36710642
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgcca 118  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  36710687 tttaatcatttaaaatttcgtctctctccccacttaatcactgcca 36710642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 72 - 120
Target Start/End: Complemental strand, 183530 - 183482
Alignment:
Q  72 atttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  183530 atttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 183482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 1841549 - 1841601
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  1841549 tttaatcatttaaaatttcgtcactctccccacttaatcactgccatgtcact 1841601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 4960630 - 4960682
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||| | |||||||||||||||||||||||    
T  4960630 tttaatcatttaaaatttcgtccctcttcccacttaatcactgccacgtcact 4960682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 13914405 - 13914353
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||| ||||||||||||||||||    
T  13914405 tttaatcatttaaaatttcgtccctctccccactaaatcactgccacgtcact 13914353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 17662188 - 17662136
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||| | |||||||||||||||||||||||    
T  17662188 tttaatcatttaaaatttcgtccctcttcccacttaatcactgccacgtcact 17662136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 24009879 - 24009827
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||| |||||    
T  24009879 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacatcact 24009827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 25065019 - 25065075
Alignment:
Q  69 aaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||| |||||||||||| |||||||| |||||||||||| |||||||||||||||||    
T  25065019 aaaaattaatcatttaagatttcgtccctctcctcacttgatcactgccacgtcact 25065075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 25647973 - 25648021
Alignment:
Q  72 atttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  25647973 atttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 25648021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 121
Target Start/End: Original strand, 42248563 - 42248611
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgt 121  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  42248563 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgt 42248611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 13245934 - 13245997
Alignment:
Q  67 ccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgatta 130  Q
    |||||||||||||| ||||||||| ||| |||||| ||||||||||||| ||||||||| ||||    
T  13245934 ccaaaatttaatcacttaaaattttgtccctctccccacttaatcactgtcacgtcactaatta 13245997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 25065972 - 25065909
Alignment:
Q  69 aaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagc 132  Q
    |||| |||||||||||| |||||||| |||||  ||||||||||||||||| ||||||||||||    
T  25065972 aaaaattaatcatttaagatttcgtccctctctccacttaatcactgccacctcactgattagc 25065909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 44523474 - 44523415
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagc 132  Q
    ||||||||||||||||||| || ||| | |||||||||||||||||||||||| ||||||    
T  44523474 tttaatcatttaaaatttcatccctcccttcacttaatcactgccacgtcactaattagc 44523415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 48691242 - 48691293
Alignment:
Q  77 atcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgat 128  Q
    |||||||||||||| ||| |||||| ||||||||||||||||||||||||||    
T  48691242 atcatttaaaattttgtcactctccccacttaatcactgccacgtcactgat 48691293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 16970877 - 16970823
Alignment:
Q  69 aaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtca 123  Q
    |||||||||||||||||||||||||| |||||| |||||||||| ||||| ||||    
T  16970877 aaaatttaatcatttaaaatttcgtccctctccccacttaatcattgccatgtca 16970823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 24905473 - 24905427
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  24905473 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 24905427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 28011454 - 28011500
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  28011454 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 28011500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 31514623 - 31514577
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  31514623 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 31514577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 33442900 - 33442854
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  33442900 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 33442854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 1103551 - 1103603
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| ||||||||||||| || ||||||    
T  1103551 tttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcact 1103603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 14879061 - 14879113
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| ||||||||||||| || ||||||    
T  14879061 tttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcact 14879113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 30711417 - 30711469
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| ||| || |||||||||||||||| ||||||    
T  30711417 tttaatcatttaaaatttcgtccctcgccccacttaatcactgccatgtcact 30711469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 34464787 - 34464735
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||| ||| |||||| |||||||||||||||| ||||||    
T  34464787 tttaatcatttaaaattttgtccctctccccacttaatcactgccatgtcact 34464735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 43758912 - 43758964
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||  |||||||||||||||| ||||||    
T  43758912 tttaatcatttaaaatttcgtccctctctccacttaatcactgccatgtcact 43758964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 46163120 - 46163172
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||||||||||||||| |||||||| |||| || ||||||    
T  46163120 tttaatcatttaaaatttcgtctctctccccacttaattactgtcatgtcact 46163172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 72 - 120
Target Start/End: Complemental strand, 47999431 - 47999383
Alignment:
Q  72 atttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||| ||||| |||||| ||||||||||||||||||    
T  47999431 atttaatcatttaaaatatcgtccctctccccacttaatcactgccacg 47999383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 26024513 - 26024560
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||| |||||| |||||| ||||||||||||||||||    
T  26024513 tttaatcatttaaaagttcgtccctctccccacttaatcactgccacg 26024560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 52134159 - 52134205
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||| |||||||||||||| |||||| ||||||||||||||||||    
T  52134159 ttaatcgtttaaaatttcgtccctctccccacttaatcactgccacg 52134205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 19515909 - 19515954
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgcca 118  Q
    |||||| ||||||||||||||| |||||| ||||||||||||||||    
T  19515909 tttaattatttaaaatttcgtccctctccccacttaatcactgcca 19515954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 40772597 - 40772642
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgcca 118  Q
    |||||||||||||||||||||| |||||| ||||||||||| ||||    
T  40772597 tttaatcatttaaaatttcgtccctctccccacttaatcaccgcca 40772642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 9443654 - 9443714
Alignment:
Q  65 tcccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||||||| ||| ||| || |||||||||| || || ||||||    
T  9443654 tcccaaaatttaatcatttaaaatttggtccctccccccacttaatcattgtcaagtcact 9443714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 35152433 - 35152485
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||| ||| |||||| |||||||||||||| | ||||||    
T  35152433 tttaatcatttaaaattttgtccctctccccacttaatcactgcaatgtcact 35152485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 40435431 - 40435483
Alignment:
Q  69 aaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgt 121  Q
    ||||||||||||||||||||| ||||||||  | || ||||||||||||||||    
T  40435431 aaaatttaatcatttaaaattccgtctctcagcccaattaatcactgccacgt 40435483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 19227047 - 19227109
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgatta 130  Q
    ||||||||||||| ||||||||||||| ||||||  ||||| |||||  ||||||||| ||||    
T  19227047 caaaatttaatcacttaaaatttcgtccctctcccaacttattcactatcacgtcacttatta 19227109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 118
Target Start/End: Complemental strand, 23209662 - 23209620
Alignment:
Q  76 aatcatttaaaatttcgtctctctcctcacttaatcactgcca 118  Q
    ||||||||| ||||||||| |||||| ||||||||||||||||    
T  23209662 aatcatttacaatttcgtccctctccccacttaatcactgcca 23209620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 17691309 - 17691398
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagcaaaagatgatgtgaactgacaaaaataccc 162  Q
    |||||||||||||||||||||| |||  |  | |||| |||| |||| ||| |||||| ||||| ||||| ||||  |||||||||||||    
T  17691309 tttaatcatttaaaatttcgtccctcaaccaagttaaccacttccacatcagtgattaacaaaatatgatttgaaaggacaaaaataccc 17691398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 117
Target Start/End: Complemental strand, 19017968 - 19017923
Alignment:
Q  72 atttaatcatttaaaatttcgtctctctcctcacttaatcactgcc 117  Q
    ||||||||||||||||||| ||| |||| | |||||||||||||||    
T  19017968 atttaatcatttaaaattttgtccctcttcccacttaatcactgcc 19017923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 31197152 - 31197207
Alignment:
Q  75 taatcatttaaaatttcgtctctc-tcctcacttaatcactgccacgtcactgatta 130  Q
    ||||||||||||||||| || ||| |||| | |||||||||||||||||||||||||    
T  31197152 taatcatttaaaatttcatccctcatcct-agttaatcactgccacgtcactgatta 31197207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 41098823 - 41098875
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||| ||| | |||| |||||||||||| |||| |||||    
T  41098823 tttaatcatttaaaattttgtccccctccccacttaatcactaccacatcact 41098875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 42533104 - 42533160
Alignment:
Q  76 aatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagc 132  Q
    ||||||||||||||| ||||||   | || ||||| |||||||||||||||||||||    
T  42533104 aatcatttaaaattttgtctctgagcccagttaattactgccacgtcactgattagc 42533160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 48779207 - 48779259
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||| | |  |||||| |||||||||||||||| ||||||    
T  48779207 tttaatcatttaaaattcctttcctctccccacttaatcactgccatgtcact 48779259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 5e-22; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 41988047 - 41988104
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41988047 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacatcact 41988104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 54317977 - 54317917
Alignment:
Q  65 tcccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||    
T  54317977 tcccaaaatttaatcatttaaaatttcgtctctctccctaattaatcactgccacgtcact 54317917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 39399436 - 39399378
Alignment:
Q  67 ccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||    
T  39399436 ccaaaatttaatcatttaaaatttcatctctctccccagttaatcactgccacgtcact 39399378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 33689718 - 33689665
Alignment:
Q  72 atttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  33689718 atttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcact 33689665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 33156332 - 33156273
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagc 132  Q
    |||||||||||||||||||||| ||| || ||||||||||||||||||||||| ||||||    
T  33156332 tttaatcatttaaaatttcgtccctccccccacttaatcactgccacgtcactaattagc 33156273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 73 - 124
Target Start/End: Complemental strand, 51994224 - 51994173
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcac 124  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  51994224 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcac 51994173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 23458317 - 23458265
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||| |||||    
T  23458317 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacatcact 23458265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 26463936 - 26463884
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| ||||||||||||| |||||||||    
T  26463936 tttaatcatttaaaatttcgtccctctccccacttaatcactgtcacgtcact 26463884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 40758234 - 40758286
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||||||||||| ||||||||||    
T  40758234 tttaatcatttaaaatttcgtccctctccccacttaatcactaccacgtcact 40758286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 42854520 - 42854569
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccac 119  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  42854520 caaaatttaatcatttaaaatttcgtctctctc--cacttaatcactgccac 42854569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 43384373 - 43384425
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||||||||||||||| ||||||||||||| || ||||||    
T  43384373 tttaatcatttaaaatttcgtctctctccccacttaatcactgtcatgtcact 43384425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 2796269 - 2796316
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  2796269 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 2796316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 19741230 - 19741183
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  19741230 tttaatcatttaaaatttcgtcactctccccacttaatcactgccacg 19741183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 115
Target Start/End: Complemental strand, 40506126 - 40506083
Alignment:
Q  72 atttaatcatttaaaatttcgtctctctcctcacttaatcactg 115  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  40506126 atttaatcatttaaaatttcgtctctctccgcacttaatcactg 40506083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 8041707 - 8041753
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  8041707 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 8041753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 10770797 - 10770751
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  10770797 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 10770751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 30380931 - 30380993
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgatta 130  Q
    ||||||||||||||||||||||||||| ||||   ||||| ||||||||||||||||| ||||    
T  30380931 caaaatttaatcatttaaaatttcgtccctctgtccacttgatcactgccacgtcactaatta 30380993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 36314604 - 36314558
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  36314604 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 36314558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 48322683 - 48322637
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  48322683 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 48322637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 54466514 - 54466560
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  54466514 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 54466560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 124
Target Start/End: Complemental strand, 44654847 - 44654790
Alignment:
Q  67 ccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcac 124  Q
    |||||||||||||| ||||||||||||| |||||| || |||||||||| ||||||||    
T  44654847 ccaaaatttaatcacttaaaatttcgtccctctccccatttaatcactgtcacgtcac 44654790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 9294296 - 9294244
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| ||||||||||||| || ||||||    
T  9294296 tttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcact 9294244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 126
Target Start/End: Original strand, 20704514 - 20704573
Alignment:
Q  67 ccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactg 126  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||||| ||| |||||||    
T  20704514 ccaaaatttaatcacttaaaattccgtccctctccccacttaatcactaccatgtcactg 20704573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 20704671 - 20704608
Alignment:
Q  67 ccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgatta 130  Q
    |||||||||||||| ||||||||||||| |||| | ||||||||||| | ||||||||| ||||    
T  20704671 ccaaaatttaatcacttaaaatttcgtccctcttcccacttaatcacagtcacgtcactaatta 20704608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 25107304 - 25107362
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagc 132  Q
    ||||||||||||||||||||| |||  | || |||||||||||||||||| ||||||||    
T  25107304 ttaatcatttaaaatttcgtccctcatcacagttaatcactgccacgtcagtgattagc 25107362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 25108432 - 25108374
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagc 132  Q
    |||||||||||||||||||||  ||  | || |||||||||||||||||||||||||||    
T  25108432 ttaatcatttaaaatttcgtccttcatcacagttaatcactgccacgtcactgattagc 25108374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 46474905 - 46474950
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgcca 118  Q
    |||||||||||||||||| ||| |||||| ||||||||||||||||    
T  46474905 tttaatcatttaaaattttgtccctctccccacttaatcactgcca 46474950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 9367832 - 9367883
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||||||| |||  | || ||||||||||||||||||||    
T  9367832 ttaatcatttaaaatttcgtccctcatcccaattaatcactgccacgtcact 9367883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 163
Target Start/End: Original strand, 29192121 - 29192216
Alignment:
Q  69 aaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact-gattagcaaaagatgatgtgaactgacaaaaataccct 163  Q
    |||| ||||||||||||||||||||| |||| | |  |||||||||||||||||| |  ||||||||||    ||| ||| |||||||||||||||    
T  29192121 aaaaattaatcatttaaaatttcgtccctcttcccgattaatcactgccacgtcattaaattagcaaaatgacatgagaattgacaaaaataccct 29192216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 55052586 - 55052539
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||||||| |||||| || ||||||||| |||||    
T  55052586 tttaatcatttaaaatttcgtccctctccccatttaatcactaccacg 55052539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 32717119 - 32717065
Alignment:
Q  69 aaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtca 123  Q
    |||| ||||||||||||||||||||| |||| | || ||||| ||||||||||||    
T  32717119 aaaaattaatcatttaaaatttcgtccctcttcccaattaattactgccacgtca 32717065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 115
Target Start/End: Complemental strand, 40033794 - 40033752
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactg 115  Q
    |||||||||||||||||| ||| |||||| |||||||||||||    
T  40033794 tttaatcatttaaaattttgtccctctccccacttaatcactg 40033752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 14634096 - 14634044
Alignment:
Q  67 ccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccac 119  Q
    |||||||||||||| | ||| |||||||  ||||| |||||||||||||||||    
T  14634096 ccaaaatttaatcactaaaactttcgtccttctccccacttaatcactgccac 14634044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 5e-19; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 13186150 - 13186202
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13186150 tttaatcatttaaaatttcgtctctctccccacttaatcactgccacgtcact 13186202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 16388864 - 16388812
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  16388864 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcact 16388812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 36928566 - 36928618
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  36928566 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcact 36928618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 130
Target Start/End: Complemental strand, 11291254 - 11291192
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgatta 130  Q
    ||||||||||||| ||||||||| || ||||||||||||||||||||||||| ||||| ||||    
T  11291254 caaaatttaatcacttaaaattttgtatctctcctcacttaatcactgccacatcactaatta 11291192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 29566484 - 29566414
Alignment:
Q  132 caaaagatgatgtgaactgacaaaaatacccttaagacttcagccaaaagcaaaatgaccaaaatgccccc 202  Q
    ||||||||| ||||||||||||||||||||| |||||||| |||||||| ||||||   ||||||||||||    
T  29566484 caaaagatggtgtgaactgacaaaaatacccctaagactttagccaaaaacaaaataggcaaaatgccccc 29566414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 31608849 - 31608799
Alignment:
Q  75 taatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  31608849 taatcatttaaaatttcgtccctctccccacttaatcactgccacgtcact 31608799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 12199256 - 12199211
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccac 119  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  12199256 ttaatcatttaaaatttcgtctctctccccacttaatcactgccac 12199211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 12443684 - 12443639
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccac 119  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  12443684 ttaatcatttaaaatttcgtctctctccccacttaatcactgccac 12443639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 35756672 - 35756724
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  35756672 tttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcact 35756724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 39071766 - 39071818
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| ||||||||||||||| |||||||    
T  39071766 tttaatcatttaaaatttcgtccctctccccacttaatcactgccgcgtcact 39071818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 40318302 - 40318250
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||||||||  |||||||||||||||||||||| ||||||    
T  40318302 tttaatcatttaaaatttcgtccttctcctcacttaatcactgccatgtcact 40318250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 1425360 - 1425313
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  1425360 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 1425313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 23663852 - 23663805
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  23663852 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 23663805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 3041762 - 3041716
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  3041762 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 3041716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 36325325 - 36325371
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  36325325 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 36325371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 38845605 - 38845559
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  38845605 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 38845559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 38862708 - 38862754
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccac 119  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||    
T  38862708 tttaatcatttaaaatttcgtccctctccccacttaatcactgccac 38862754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 38955793 - 38955839
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccac 119  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||    
T  38955793 tttaatcatttaaaatttcatccctctcctcacttaatcactgccac 38955839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 40775956 - 40775910
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  40775956 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 40775910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 44407163 - 44407117
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  44407163 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 44407117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 2693863 - 2693803
Alignment:
Q  65 tcccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||||||| ||  ||| || ||||||||||||| |||||||||    
T  2693863 tcccaaaatttaatcatttaaaatttggttactccccccacttaatcactgtcacgtcact 2693803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 4405998 - 4405946
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||| | ||||||||||||| |||||||||    
T  4405998 tttaatcatttaaaatttcgtccctcttcccacttaatcactgtcacgtcact 4405946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 8316926 - 8316879
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||||  ||||| ||||||||||||||||||    
T  8316926 tttaatcatttaaaatttcgtccatctccccacttaatcactgccacg 8316879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 22915696 - 22915649
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||| |||| |||||| ||||||||||||||||||    
T  22915696 tttaatcatttaaaattccgtccctctccccacttaatcactgccacg 22915649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 23698582 - 23698535
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||||||| |||||| ||||||||||||| ||||    
T  23698582 tttaatcatttaaaatttcgtccctctccccacttaatcactgtcacg 23698535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 24085858 - 24085921
Alignment:
Q  67 ccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgatta 130  Q
    |||||||||||||  ||||||||| ||| |||||| ||||||||||||| ||||||||| ||||    
T  24085858 ccaaaatttaatcgcttaaaattttgtccctctccccacttaatcactgtcacgtcactaatta 24085921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 2266583 - 2266629
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||| |||||||||||||| |||||| ||||||||||||||||||    
T  2266583 ttaatcgtttaaaatttcgtccctctccccacttaatcactgccacg 2266629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 11674786 - 11674831
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  11674786 ttaatcatttaaaatttcgtccctctcc-cacttaatcactgccacg 11674831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 36186405 - 36186359
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccac 119  Q
    |||||||||||||||||||||| ||||||  ||||||||||||||||    
T  36186405 tttaatcatttaaaatttcgtccctctccctacttaatcactgccac 36186359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 9499943 - 9499884
Alignment:
Q  65 tcccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||||||||||||  || ||| || ||||||||||||| |||||||||    
T  9499943 tcccaaaatttaatcatttaaaatttgatccctc-ccccacttaatcactgtcacgtcact 9499884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 117
Target Start/End: Complemental strand, 12273191 - 12273147
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgcc 117  Q
    |||||||||||||||||||||| |||| | |||||||||||||||    
T  12273191 tttaatcatttaaaatttcgtccctcttcccacttaatcactgcc 12273147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 31873245 - 31873185
Alignment:
Q  65 tcccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||||||| ||  |||| | |||||||||||||| || |||||    
T  31873245 tcccaaaatttaatcatttaaaattttgttcctcttcccacttaatcactgctacatcact 31873185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 118
Target Start/End: Complemental strand, 35449915 - 35449871
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgcca 118  Q
    ||||||||||||||||||||| |||||| || |||||||||||||    
T  35449915 ttaatcatttaaaatttcgtccctctccccatttaatcactgcca 35449871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 100
Target Start/End: Original strand, 31872970 - 31873005
Alignment:
Q  65 tcccaaaatttaatcatttaaaatttcgtctctctc 100  Q
    ||||||||||||||||||||||||||| ||||||||    
T  31872970 tcccaaaatttaatcatttaaaatttcatctctctc 31873005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 20385659 - 20385717
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagc 132  Q
    ||||||||||||||||||||| ||   | || ||||| |||||||||||||||||||||    
T  20385659 ttaatcatttaaaatttcgtccctgagcccagttaattactgccacgtcactgattagc 20385717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 11721434 - 11721371
Alignment:
Q  67 ccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgatta 130  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||| ||||    
T  11721434 ccaaaatttaatcacttaaaatttcgtctctctccccacttaatcactgtcacgtcactaatta 11721371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 15848178 - 15848230
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  15848178 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcact 15848230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 36755183 - 36755235
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  36755183 tttaatcatttaaaatttcgtctctctccccacttaatcactgtcacgtcact 36755235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 37895685 - 37895633
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  37895685 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcact 37895633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 11689625 - 11689688
Alignment:
Q  67 ccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgatta 130  Q
    |||||||||||||| |||||||||||||  ||||| ||||||||||||||||||||||| ||||    
T  11689625 ccaaaatttaatcacttaaaatttcgtccatctccccacttaatcactgccacgtcactaatta 11689688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 36382251 - 36382303
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||||| || |||||| |||||||||||||||||||||||    
T  36382251 tttaatcatttaaaatttcatccctctccccacttaatcactgccacgtcact 36382303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 39423605 - 39423657
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  39423605 tttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcact 39423657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 44714099 - 44714047
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  44714099 tttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcact 44714047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 6657968 - 6658015
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  6657968 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 6658015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 10840561 - 10840624
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattag 131  Q
    ||||||||||||||||||| ||||||| |||| | ||||||||||||| ||||||||| |||||    
T  10840561 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgtcacgtcactaattag 10840624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 16099145 - 16099192
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  16099145 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 16099192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 39498400 - 39498447
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  39498400 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 39498447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 122
Target Start/End: Original strand, 11347508 - 11347562
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtc 122  Q
    ||||||||||||||||||||||||||||||||||  | ||||||| |||||||||    
T  11347508 caaaatttaatcatttaaaatttcgtctctctccctaattaatcagtgccacgtc 11347562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 14900789 - 14900743
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  14900789 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 14900743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 33739794 - 33739840
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  33739794 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 33739840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 11163361 - 11163316
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgcca 118  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||    
T  11163361 tttaatcatttaaaatttcgtccctctccccacttaatcactgcca 11163316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 2318248 - 2318300
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||||||| | ||||||||||||    
T  2318248 tttaatcatttaaaatttcgtccctctccccacttaattaatgccacgtcact 2318300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 10712813 - 10712865
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||||| || |||||| |||||||||||| ||||||||||    
T  10712813 tttaatcatttaaaatttcatccctctccccacttaatcactaccacgtcact 10712865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 17266482 - 17266530
Alignment:
Q  67 ccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactg 115  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||||||    
T  17266482 ccaaaatttaatcatttaaaatttggtccctctccccacttaatcactg 17266530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 36479808 - 36479860
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||||||||  ||||| |||||||||||||||| ||||||    
T  36479808 tttaatcatttaaaatttcgtccatctccccacttaatcactgccatgtcact 36479860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 16105634 - 16105681
Alignment:
Q  65 tcccaaaatttaatcatttaaaatttcgtctctctcctcacttaatca 112  Q
    |||||||||||||||||||||||||| ||||||| || ||||||||||    
T  16105634 tcccaaaatttaatcatttaaaatttagtctctccccccacttaatca 16105681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 17266676 - 17266629
Alignment:
Q  65 tcccaaaatttaatcatttaaaatttcgtctctctcctcacttaatca 112  Q
    ||||||||||||||||||||||||||||||  ||||| ||||||||||    
T  17266676 tcccaaaatttaatcatttaaaatttcgtcattctccccacttaatca 17266629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 25893556 - 25893497
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagc 132  Q
    ||||||||||||||| ||||| ||||||| | |||||||||||||||||| || ||||||    
T  25893556 tttaatcatttaaaaattcgtttctctccccccttaatcactgccacgtccctaattagc 25893497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 13995979 - 13995933
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||| |||||||||||||| |||||| ||||||||||||||||||    
T  13995979 ttaatcgtttaaaatttcgtccctctccccacttaatcactgccacg 13995933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 33062356 - 33062310
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  33062356 ttaatcatttataatttcgtccctctccccacttaatcactgccacg 33062310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 41248865 - 41248819
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||| |||||||||||||| |||||| ||||||||||||||||||    
T  41248865 ttaatcgtttaaaatttcgtccctctccccacttaatcactgccacg 41248819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 6846869 - 6846922
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgt 121  Q
    ||||||| ||||||||||||||||||| |||| | |||||||| ||||||||||    
T  6846869 caaaattgaatcatttaaaatttcgtccctcttcccacttaattactgccacgt 6846922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 22051331 - 22051287
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgcca 118  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||    
T  22051331 tttaatcatttaaaatttcgtctctctcc-cacctaatcactgcca 22051287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 34447914 - 34447954
Alignment:
Q  85 aaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||| ||||||||||||||||| |||||    
T  34447914 aaatttcgtctctctccccacttaatcactgccacatcact 34447954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 11349547 - 11349484
Alignment:
Q  69 aaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagc 132  Q
    |||||||||||||||||||||||||| |||  | || ||||||| |||||||||  ||||||||    
T  11349547 aaaatttaatcatttaaaatttcgtccctcaacccagttaatcagtgccacgtctttgattagc 11349484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 25892484 - 25892543
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagc 132  Q
    ||||||||||||||| |||||| |||||| |||||||| ||| ||||||| || ||||||    
T  25892484 tttaatcatttaaaaattcgtccctctccccacttaattactaccacgtctctaattagc 25892543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 1696046 - 1696000
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||| |||||||||||||| |||||| ||||||||||||| ||||    
T  1696046 ttaatcgtttaaaatttcgtccctctccccacttaatcactgtcacg 1696000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 131
Target Start/End: Complemental strand, 6577615 - 6577557
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattag 131  Q
    |||||| |||||||| | |||| |||| | ||||||||||||||||||||||| |||||    
T  6577615 tttaattatttaaaaatccgtccctcttcccacttaatcactgccacgtcactaattag 6577557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 6848076 - 6848022
Alignment:
Q  69 aaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtca 123  Q
    ||||||||||||||||||||||||||  || || |||||||| ||| ||||||||    
T  6848076 aaaatttaatcatttaaaatttcgtccatcaccccacttaattactaccacgtca 6848022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 123
Target Start/End: Original strand, 25623374 - 25623428
Alignment:
Q  69 aaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtca 123  Q
    |||| ||||||||||||||||||||| |||| | |  ||||||||||||||||||    
T  25623374 aaaaattaatcatttaaaatttcgtccctctacccggttaatcactgccacgtca 25623428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 44044205 - 44044263
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagc 132  Q
    ||||||||||||||||||||| ||   | || ||||| |||||||||||||||||||||    
T  44044205 ttaatcatttaaaatttcgtccctgagcccaattaattactgccacgtcactgattagc 44044263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 125
Target Start/End: Complemental strand, 3653423 - 3653366
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||| |||||||||||||||||||||| |||| |  | ||||||||| ||||||||||    
T  3653423 caaagtttaatcatttaaaatttcgtccctcttccaagttaatcactaccacgtcact 3653366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 45556202 - 45556247
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgcca 118  Q
    |||||||||||||||||| ||| ||||||  |||||||||||||||    
T  45556202 tttaatcatttaaaattttgtccctctccctacttaatcactgcca 45556247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 121
Target Start/End: Original strand, 6573136 - 6573184
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgt 121  Q
    ||||||||||||||| |||||| |||||| | ||||||||||| |||||    
T  6573136 tttaatcatttaaaaattcgtccctctccccccttaatcactgtcacgt 6573184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 45010942 - 45010893
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtc 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45010942 tttaatcatttaaaatttcgtctctctccccacttaatcactgccacgtc 45010893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 42019935 - 42019883
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  42019935 tttaattatttaaaatttcgtctctctcctcacttaatcactgccatgtcact 42019883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 123
Target Start/End: Complemental strand, 27396933 - 27396883
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtca 123  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  27396933 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtca 27396883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 2640516 - 2640464
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||||||||||||||| ||||||||||||| || ||||||    
T  2640516 tttaatcatttaaaatttcgtctctctccccacttaatcactgtcatgtcact 2640464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 28469346 - 28469294
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||||||||||| ||||||||||    
T  28469346 tttaatcatttaaaatttcgtccctctccccacttaatcactaccacgtcact 28469294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 32053481 - 32053429
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| ||||||||||||| |||||||||    
T  32053481 tttaatcatttaaaatttcgtccctctccccacttaatcactgtcacgtcact 32053429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 40379859 - 40379911
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||||||||| ||||||||||||    
T  40379859 tttaatcatttaaaatttcgtccctctccccacttaatcaatgccacgtcact 40379911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 42731509 - 42731561
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  42731509 tttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcact 42731561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 5457245 - 5457186
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagc 132  Q
    |||||||||||||||||||||| |||  | || |||||||||||||||||||||||||||    
T  5457245 tttaatcatttaaaatttcgtccctcatcccagttaatcactgccacgtcactgattagc 5457186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 17102110 - 17102157
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  17102110 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 17102157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 27991829 - 27991876
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  27991829 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 27991876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 30948466 - 30948420
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  30948466 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 30948420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 32680901 - 32680855
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  32680901 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 32680855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 20563819 - 20563876
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||||||||| |||||||||| || |||| ||| |||||||||||    
T  20563819 caaaatttaatcatttaaaatttagtctctctccccaattaaccaccgccacgtcact 20563876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 10935884 - 10935936
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||  |||||||||||||||| ||||||    
T  10935884 tttaatcatttaaaatttcgtccctctctccacttaatcactgccatgtcact 10935936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 11397463 - 11397527
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagc 132  Q
    ||||||||||||||||||||||| |||||||  | || |||||||||| ||||||||| ||||||    
T  11397463 caaaatttaatcatttaaaatttagtctctcatcccaattaatcactgtcacgtcactaattagc 11397527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 13311377 - 13311325
Alignment:
Q  67 ccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccac 119  Q
    |||||||||||| ||||||||||||||| ||||||  ||||||||||||||||    
T  13311377 ccaaaatttaataatttaaaatttcgtccctctcccgacttaatcactgccac 13311325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 45010688 - 45010740
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||||||||  ||||| |||||||||||||||| ||||||    
T  45010688 tttaatcatttaaaatttcgtccatctccccacttaatcactgccaagtcact 45010740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 11400312 - 11400261
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccac 119  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||| ||||    
T  11400312 caaaatttaatcatttaaaatttattctctctccccacttaatcacttccac 11400261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 24388909 - 24388960
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcac 124  Q
    |||||||| ||||||||||||| |||||| ||||||||||||||||| ||||    
T  24388909 tttaatcacttaaaatttcgtccctctccccacttaatcactgccacatcac 24388960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 32299043 - 32298996
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||||||    
T  32299043 tttaatcattgaaaatttcgtccctctccccacttaatcactgccacg 32298996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 34928956 - 34928910
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||| |||||||||||||| |||||| ||||||||||||||||||    
T  34928956 ttaatcgtttaaaatttcgtccctctccccacttaatcactgccacg 34928910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 39686840 - 39686794
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||| |||||||||||||| |||||| ||||||||||||||||||    
T  39686840 ttaatcgtttaaaatttcgtccctctccccacttaatcactgccacg 39686794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 22871615 - 22871570
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgcca 118  Q
    ||||||||||||||||||| || |||||| ||||||||||||||||    
T  22871615 tttaatcatttaaaatttcttccctctccccacttaatcactgcca 22871570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 3914228 - 3914280
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||| |  |||||||||||||||| |||||    
T  3914228 tttaatcatttaaaatttcgtccctcttccaacttaatcactgccacatcact 3914280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 23181332 - 23181280
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||  ||||||||||||| || ||||||    
T  23181332 tttaatcatttaaaatttcgtccctctctccacttaatcactgtcatgtcact 23181280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 38643636 - 38643692
Alignment:
Q  69 aaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||| |||||||||||| |||||||| |||||| |||||||| |||| |||||||||    
T  38643636 aaaaattaatcatttaagatttcgtccctctccccacttaattactgtcacgtcact 38643692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 6253561 - 6253608
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||||||| |||||  |||||||||| |||||||    
T  6253561 tttaatcatttaaaatttcgtccctctctccacttaatcaatgccacg 6253608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 6571103 - 6571150
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||| ||| |||||| ||||||||||||| ||||    
T  6571103 tttaatcatttaaaattttgtccctctccccacttaatcactgtcacg 6571150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 19204579 - 19204626
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||| ||| |||||| |||||||||| |||||||    
T  19204579 tttaatcatttaaaattttgtccctctccccacttaatcattgccacg 19204626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 45915822 - 45915759
Alignment:
Q  69 aaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagc 132  Q
    |||| |||||||||||||||| |||| ||||   |  |||||||||||||||||||||||||||    
T  45915822 aaaaattaatcatttaaaattccgtccctctttccgattaatcactgccacgtcactgattagc 45915759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 12644147 - 12644093
Alignment:
Q  69 aaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtca 123  Q
    |||| ||||||||||||||||||||| |||| | |  ||||||||||||||||||    
T  12644147 aaaaattaatcatttaaaatttcgtccctcttcccggttaatcactgccacgtca 12644093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 123
Target Start/End: Complemental strand, 43124490 - 43124440
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtca 123  Q
    |||||||||||||||||||||| || | | || ||||||||||||||||||    
T  43124490 tttaatcatttaaaatttcgtccctattcccagttaatcactgccacgtca 43124440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 123
Target Start/End: Original strand, 45914610 - 45914664
Alignment:
Q  69 aaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtca 123  Q
    |||| ||||||||||||||||||||| |||| | |  ||||||||||||||||||    
T  45914610 aaaaattaatcatttaaaatttcgtccctcttcccgattaatcactgccacgtca 45914664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 17886827 - 17886778
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtca 123  Q
    ||||||||||||||||||||| ||   | |||||||||||||||||||||    
T  17886827 ttaatcatttaaaatttcgtcccttgacccacttaatcactgccacgtca 17886778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 37656949 - 37656994
Alignment:
Q  80 atttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||| |||||| ||||||||||| | |||||||||    
T  37656949 atttaaaatttcgtccctctccccacttaatcaccggcacgtcact 37656994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 20426673 - 20426609
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagc 132  Q
    |||| |||||||||||||||||| ||| |||  | |||| || |||||||||||||| |||||||    
T  20426673 caaagtttaatcatttaaaatttagtccctcatcccactaaaccactgccacgtcaccgattagc 20426609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 33647052 - 33647105
Alignment:
Q  72 atttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  33647052 atttaatcatttaaaatttcgtctctctccccatttaatcactgccacgtcact 33647105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 3059347 - 3059399
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  3059347 tttaatcatttaaaatttcgtccctctcctcacttaatcactgccatgtcact 3059399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 130
Target Start/End: Complemental strand, 1215209 - 1215147
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgatta 130  Q
    ||||||||||||| ||||||||||||| || ||| ||||||||||||||||||||||| ||||    
T  1215209 caaaatttaatcacttaaaatttcgtccctatccccacttaatcactgccacgtcactaatta 1215147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 12080726 - 12080778
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  12080726 tttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcact 12080778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 21628051 - 21627999
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||| ||| |||||| |||||||||||||||||||||||    
T  21628051 tttaatcatttaaaattttgtccctctccccacttaatcactgccacgtcact 21627999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 33517624 - 33517676
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||||||||||||| ||||||||    
T  33517624 tttaatcatttaaaatttcgtccctctccccacttaatcactgctacgtcact 33517676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 26463264 - 26463326
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgatta 130  Q
    |||| |||||||||||||||||||||| |||  | || |||||||||||||||||||||||||    
T  26463264 caaagtttaatcatttaaaatttcgtccctcatcccagttaatcactgccacgtcactgatta 26463326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 28000691 - 28000645
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  28000691 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 28000645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 30337540 - 30337586
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  30337540 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 30337586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 130
Target Start/End: Complemental strand, 33648808 - 33648746
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgatta 130  Q
    ||||||||||||| |||||||||| || ||||||||||||||| |||||||| ||||| ||||    
T  33648808 caaaatttaatcacttaaaatttcttccctctcctcacttaattactgccacatcactaatta 33648746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 30803951 - 30803996
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgcca 118  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||    
T  30803951 tttaatcatttaaaatttcgtccctctccccacttaatcactgcca 30803996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 11392928 - 11392980
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||||||||| |||||  ||||||||||||||| ||||||    
T  11392928 tttaatcatttaaaatttcgtctatctcccaacttaatcactgccatgtcact 11392980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 30725849 - 30725901
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| || ||||||||||||| ||||||    
T  30725849 tttaatcatttaaaatttcgtccctctccccatttaatcactgccatgtcact 30725901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 17734501 - 17734454
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||| ||| |||||| ||||||||||||||||||    
T  17734501 tttaatcatttaaaattttgtccctctccccacttaatcactgccacg 17734454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 28498371 - 28498304
Alignment:
Q  65 tcccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagc 132  Q
    ||||||| |||||||||||||||||| ||| ||   | || |||||||||||||||||||||||||||    
T  28498371 tcccaaagtttaatcatttaaaatttggtccctgagcccagttaatcactgccacgtcactgattagc 28498304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 29810782 - 29810715
Alignment:
Q  65 tcccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagc 132  Q
    ||||||| |||||||||||||||||| ||| ||   | || |||||||||||||||||||||||||||    
T  29810782 tcccaaagtttaatcatttaaaatttggtccctgagcccagttaatcactgccacgtcactgattagc 29810715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 363136 - 363090
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||| |||||||||||||| |||||| ||||||||||||||||||    
T  363136 ttaatcgtttaaaatttcgtccctctccccacttaatcactgccacg 363090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 14196921 - 14196875
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||| | |||||| ||||||||||||||||||    
T  14196921 ttaatcatttaaaatttcgcccctctccccacttaatcactgccacg 14196875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 101
Target Start/End: Original strand, 10782494 - 10782527
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcc 101  Q
    ||||||||||||||||||||||||||||||||||    
T  10782494 caaaatttaatcatttaaaatttcgtctctctcc 10782527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 141083 - 141019
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagc 132  Q
    ||||| |||||||||||||||||| ||||||  ||||   |||||||| ||||||||||||||||    
T  141083 caaaaattaatcatttaaaatttcatctctcatctcatccaatcactgtcacgtcactgattagc 141019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 149104 - 149040
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagc 132  Q
    ||||| |||||||||||||||||| ||||||  ||||   |||||||| ||||||||||||||||    
T  149104 caaaaattaatcatttaaaatttcatctctcatctcatccaatcactgtcacgtcactgattagc 149040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 24210616 - 24210673
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||| ||||||||||||||||||| || |||||| | | ||||||| |||||||||||    
T  24210616 caaagtttaatcatttaaaatttcatccctctccccgcctaatcaccgccacgtcact 24210673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 69055 - 69107
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  69055 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcact 69107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 37901 - 37849
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  37901 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcact 37849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 11047527 - 11047579
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  11047527 tttaatcatttaaaatttcgtctctctccccacttaatcactgccatgtcact 11047579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 13962954 - 13963006
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  13962954 tttaatcatttaaaatttcgtccctctcctcacttaatcactgtcacgtcact 13963006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 32242332 - 32242384
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  32242332 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcact 32242384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 5993979 - 5994031
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  5993979 tttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcact 5994031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 12904836 - 12904896
Alignment:
Q  65 tcccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||| ||||||||||||||| |||||| |||||||||| || |||||||||    
T  12904836 tcccaaaatttaataatttaaaatttcgtccctctccccacttaatcaatgtcacgtcact 12904896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 19892646 - 19892594
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  19892646 tttaatcatttaaaatttcgtcattctccccacttaatcactgccacgtcact 19892594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 35512238 - 35512290
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||| |||||    
T  35512238 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacatcact 35512290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 3529180 - 3529133
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  3529180 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 3529133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 124
Target Start/End: Complemental strand, 24547463 - 24547412
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcac 124  Q
    |||||||||||||||||||||| |||||| ||||||| ||||||||||||||    
T  24547463 tttaatcatttaaaatttcgtccctctccccacttaaccactgccacgtcac 24547412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 297320 - 297274
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  297320 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 297274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 6758171 - 6758125
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  6758171 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 6758125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 14849051 - 14848993
Alignment:
Q  67 ccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||||| ||| ||| || ||||||||||||||||| |||||    
T  14849051 ccaaaatttaatcatttaaaatttggtccctcaccccacttaatcactgccacatcact 14848993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 38442158 - 38442204
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccac 119  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||    
T  38442158 tttaatcatttaaaatttcgtccctctccccacttaatcactgccac 38442204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 38475337 - 38475291
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccac 119  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||    
T  38475337 tttaatcatttaaaatttcgtccctctccccacttaatcactgccac 38475291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 41930607 - 41930653
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  41930607 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 41930653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 28269726 - 28269681
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgcca 118  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||    
T  28269726 tttaatcatttaaaatttcgtccctctccccacttaatcactgcca 28269681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 28771176 - 28771131
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgcca 118  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||    
T  28771176 tttaatcatttaaaatttcgtccctctccccacttaatcactgcca 28771131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 5024356 - 5024304
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||  |||||| ||||||||||||||||| |||||    
T  5024356 tttaatcatttaaaatttcgttcctctccccacttaatcactgccacatcact 5024304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 13362566 - 13362514
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||| |||||||||| |||||||||||||| || |||||    
T  13362566 tttaatcatttaaaatttagtctctctccccacttaatcactgctacatcact 13362514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 14194761 - 14194709
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| |||||||||||||| | ||||||    
T  14194761 tttaatcatttaaaatttcgtccctctccccacttaatcactgctatgtcact 14194709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 20840623 - 20840675
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||| ||||||||||| ||| |||||| |||||||||||||||||||||||    
T  20840623 tttaatgatttaaaattttgtccctctccccacttaatcactgccacgtcact 20840675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 29646700 - 29646648
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| ||||||||||||| || ||||||    
T  29646700 tttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcact 29646648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 74 - 118
Target Start/End: Complemental strand, 31482708 - 31482664
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgcca 118  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||    
T  31482708 ttaatcatttaaaatttcgtccctctccccacttaatcactgcca 31482664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 39453390 - 39453442
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| |||||| ||||||||||||| || ||||||    
T  39453390 tttaatcatttaaaatttcgtccctctccccacttaatcactggcatgtcact 39453442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 15645058 - 15644999
Alignment:
Q  65 tcccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcac 124  Q
    |||||||||||||||||||||||||||||| ||   | ||||||||||||||||| ||||    
T  15645058 tcccaaaatttaatcatttaaaatttcgtccctacacccacttaatcactgccacatcac 15644999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 27587238 - 27587285
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||||||| |||||| || |||||||||||||||    
T  27587238 tttaatcatttaaaatttcgtccctctccccatttaatcactgccacg 27587285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 1506058 - 1506104
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||| |||||||||||||| |||||| ||||||||||||||||||    
T  1506058 ttaatcgtttaaaatttcgtccctctccccacttaatcactgccacg 1506104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 115
Target Start/End: Original strand, 8322494 - 8322536
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactg 115  Q
    |||||||||||||||||||||| |||||| |||||||||||||    
T  8322494 tttaatcatttaaaatttcgtccctctccccacttaatcactg 8322536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 22870476 - 22870422
Alignment:
Q  69 aaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtca 123  Q
    |||| |||||||||||||||||||||||||| | |  ||||||||||||||||||    
T  22870476 aaaaattaatcatttaaaatttcgtctctcttcccgattaatcactgccacgtca 22870422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 115
Target Start/End: Complemental strand, 35920522 - 35920480
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactg 115  Q
    |||||||||||||||||||||| |||||| |||||||||||||    
T  35920522 tttaatcatttaaaatttcgtccctctccccacttaatcactg 35920480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 6150544 - 6150589
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgcca 118  Q
    |||||||||||||||||||||| |||||| |||||||||| |||||    
T  6150544 tttaatcatttaaaatttcgtccctctccccacttaatcattgcca 6150589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 10684028 - 10684081
Alignment:
Q  72 atttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||||||||| ||| || ||||||||||||||||| || ||||||    
T  10684028 atttaatcatttaaaattttgtcactttcctcacttaatcactgtcatgtcact 10684081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 18247173 - 18247226
Alignment:
Q  72 atttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||||||||||| ||||||||| |||||| ||||||||||| |||| ||||||    
T  18247173 atttaatcatttagaatttcgtccctctccccacttaatcaccgccatgtcact 18247226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 186509 - 186561
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||| ||| || |||||||||||| ||| ||||||    
T  186509 tttaatcatttaaaatttcgtccctccccccacttaatcactaccatgtcact 186561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 14848821 - 14848869
Alignment:
Q  65 tcccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcac 113  Q
    |||||||||||||||||||||||||| ||| ||| || |||||||||||    
T  14848821 tcccaaaatttaatcatttaaaatttggtccctccccccacttaatcac 14848869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 16157193 - 16157141
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||| ||| |||||| ||||||||| |||||| ||||||    
T  16157193 tttaatcatttaaaattttgtccctctccccacttaatccctgccatgtcact 16157141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 17202489 - 17202541
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    ||||| |||||||||||||||| | |||| |||||||||||||||| ||||||    
T  17202489 tttaagcatttaaaatttcgtccccctccccacttaatcactgccatgtcact 17202541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 20814473 - 20814421
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||| ||| ||||||  ||||||||||||||| ||||||    
T  20814473 tttaatcatttaaaattttgtccctctccctacttaatcactgccatgtcact 20814421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 11761839 - 11761886
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||||  ||||| |||||||||| |||||||    
T  11761839 tttaatcatttaaaatttcgtccatctccccacttaatcattgccacg 11761886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 16083067 - 16083113
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccac 119  Q
    |||||||||||||||||||||  ||||||  ||||||||||||||||    
T  16083067 tttaatcatttaaaatttcgtacctctcccaacttaatcactgccac 16083113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 18670289 - 18670334
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgcca 118  Q
    ||||||||||||||||||||||  ||||| |||||||||| |||||    
T  18670289 tttaatcatttaaaatttcgtccatctccccacttaatcattgcca 18670334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 21265479 - 21265429
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||| ||||||||||||||||||||  ||||||||||||||| | ||||||    
T  21265479 tttaattatttaaaatttcgtctctct--tcacttaatcactgctatgtcact 21265429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 14607 - 14544
Alignment:
Q  69 aaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagc 132  Q
    |||| |||||||||||| |||||||| |||||| ||||||||||||||||| ||||||||||||    
T  14607 aaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactgattagc 14544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 13695 - 13751
Alignment:
Q  69 aaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||| |||||||||||| |||||||| |||||| |||||||||||| ||||||||||    
T  13695 aaaaattaatcatttaagatttcgtccctctccccacttaatcactaccacgtcact 13751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 1859 - 1906
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  1859 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 1906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0559 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 1324 - 1370
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  1324 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 1370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 141900 - 141854
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  141900 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 141854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 139763 - 139809
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  139763 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 139809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 23315 - 23371
Alignment:
Q  67 ccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtca 123  Q
    ||||| |||||||||||||||||| || |||| || |||||||||||||||||||||    
T  23315 ccaaagtttaatcatttaaaatttggtttctccccccacttaatcactgccacgtca 23371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 24684 - 24625
Alignment:
Q  73 tttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagc 132  Q
    |||||||||||||||||| ||||||   | || ||||| |||||||||||||||||||||    
T  24684 tttaatcatttaaaattttgtctctgagcccagttaattactgccacgtcactgattagc 24625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 123
Target Start/End: Original strand, 2232 - 2283
Alignment:
Q  72 atttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtca 123  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||||| ||||    
T  2232 atttaatcatttaaaattttgtccctctccccacttaatcactgccatgtca 2283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 31706 - 31773
Alignment:
Q  65 tcccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagc 132  Q
    |||||||||||||||| |||||| || |||||||  | || ||||||| |||||||||||||||||||    
T  31706 tcccaaaatttaatcacttaaaaattggtctctcaacccagttaatcaatgccacgtcactgattagc 31773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 21275 - 21229
Alignment:
Q  74 ttaatcatttaaaatttcgtctctctcctcacttaatcactgccacg 120  Q
    |||||||||||||||| |||| |||||| ||||||||||||||||||    
T  21275 ttaatcatttaaaattccgtccctctccccacttaatcactgccacg 21229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 239895 - 239830
Alignment:
Q  67 ccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgattagc 132  Q
    ||||| |||||||||||||||||||||| ||   | |||||||| |||||||| ||||||||||||    
T  239895 ccaaagtttaatcatttaaaatttcgtccctacacccacttaattactgccacatcactgattagc 239830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 6774 - 6719
Alignment:
Q  65 tcccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgt 121  Q
    |||||||||||||||||||||||||| || |||  || |||||||||||||||||||    
T  6774 tcccaaaatttaatcatttaaaatttggt-tcttcccccacttaatcactgccacgt 6719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 14136 - 14077
Alignment:
Q  65 tcccaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcact 125  Q
    |||||||||||||||||||||||||| ||| ||| || |||||||||| || |||||||||    
T  14136 tcccaaaatttaatcatttaaaatttggtccctc-ccccacttaatcattgtcacgtcact 14077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 130
Target Start/End: Complemental strand, 8200 - 8138
Alignment:
Q  68 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgatta 130  Q
    ||||||||||||| |||||| || |||||||   ||||||||||||||||| |||||| ||||    
T  8200 caaaatttaatcacttaaaaattggtctctcggttcacttaatcactgccatgtcactaatta 8138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 9294 - 9353
Alignment:
Q  70 aaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacgtcactgatta 130  Q
    ||||||||||| |||||||| |||| | |||| ||||||||||||| ||||||||| ||||    
T  9294 aaatttaatcacttaaaattccgtccc-ctccccacttaatcactgtcacgtcactaatta 9353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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